# HG changeset patch
# User dereeper
# Date 1534247959 14400
# Node ID a929ef8dea25e10128d215c037f682813199005e

planemo upload commit 11382afe87364aaafb19973470d5066229a6e34f

diff -r 000000000000 -r a929ef8dea25 execute_beagle.sh
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/execute_beagle.sh	Tue Aug 14 07:59:19 2018 -0400
@@ -0,0 +1,18 @@
+#!/bin/bash
+
+
+vcf_input=$1
+phase=$2
+impute=$3
+out_prefix="out"
+
+mkdir tmpdir$$
+
+cp -rf $vcf_input tmpdir$$/input.vcf
+
+beagle gt=$vcf_input phase-its=$phase impute-its=$impute out=$out_prefix
+
+gunzip $out_prefix.vcf.gz
+
+rm -rf tmpdir$$
+
diff -r 000000000000 -r a929ef8dea25 execute_beagle.xml
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/execute_beagle.xml	Tue Aug 14 07:59:19 2018 -0400
@@ -0,0 +1,78 @@
+<tool id="Beagle" name="Beagle" version="1.0.0" >
+	<description>Beagle version 4.0 performs genotype calling, genotype phasing, imputation of ungenotyped markers, and identity-by-descent segment detection</description>
+	<requirements>
+		<requirement type="package" version="4.0">Beagle</requirement>
+	</requirements>
+	<command interpreter="bash">$__tool_directory__/execute_beagle.sh $vcf_input $phase $impute</command>
+	<inputs>
+		<param format="vcf" name="vcf_input" type="data" label="Variant call format"/>
+		<param type="text" name="phase" value="5" help="Non-negative integer" label="specifies the number of iterations for estimating genotype phase (default: phase-its=5).Increasing this parameter will typicall increase genotype phaseaccuracy."/>
+		<param type="text" name="impute" value="5" help="Non-negative integer" label="specifies the number of iterations for estimating genotypes at ungenotyped markers (default:impute-its=5). Increasing this parameter (up to ~10 iterations) will typically increase genotype imputation accuracy."/>
+	</inputs>
+	<outputs>
+		<data format="vcf" name="vcf_ouput" label="Phased and imputed VCF" from_work_dir="out.vcf"/>
+		<data format="txt" name="log" label="Beagle log file" from_work_dir="out.log"/>
+	</outputs>
+
+	<!-- [OPTIONAL] Tests to be run manually by the Galaxy admin -->
+	<tests>
+	<!-- [HELP] Test files have to be in the ~/test-data directory -->
+		<test>
+			<param name="vcf_input" value="Annotated_VCF.vcf" />
+			<param name="phase" value="5" />
+			<param name="impute" value="5" />
+			<output name="vcf_ouput" file="output.vcf" compare="sim_size"/>
+			<output name="log" file="filelog.txt" compare="sim_size"/>
+		</test>
+	</tests>
+	<help><![CDATA[
+
+
+
+.. class:: infomark
+
+**Beagle** version 4 
+ |  **If you use Beagle in a published analysis, please report the program version and cite the following article** "S R Browning and B L Browning (2007) Rapid and accurate haplotype phasing and missing data inference for whole genome association studies by use of localized haplotype clustering. Am J Hum Genet 81:1084-97."
+
+.. class:: infomark
+
+**Galaxy integration** Provided by Southgreen & Marcon Valentin (IFB & INRA)
+
+.. class:: infomark
+
+**Support** For any questions about Galaxy integration, please send an e-mail to alexis.dereeper@ird.fr
+
+---------------------------------------------------
+
+======
+Beagle
+======
+
+-----------
+Description
+-----------
+
+  |  Beagle version 4.0 performs genotype calling, genotype phasing, imputation of ungenotyped markers, and identity-by-descent segment detection.
+
+Version 4 has multiple improvements:
+
+    a standard format (Variant Call Format) for input and output files
+    a powerful identity by descent detection algorithm: Refined IBD
+    support for multi-threaded computation
+    support for multi-allelic markers
+    improved methods for phasing and genotype imputation
+    elimination of temporary files
+    use of a sliding window permit control memory use
+
+  | For further informations, please visite the Beagle website_.
+
+
+.. _website: https://faculty.washington.edu/browning/beagle/b4_0.html
+
+
+	]]></help>
+        <citations>
+            <citation type="doi">10.1086/521987</citation>
+        </citations>
+
+</tool>
diff -r 000000000000 -r a929ef8dea25 test-data/Annotated_VCF.vcf
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/Annotated_VCF.vcf	Tue Aug 14 07:59:19 2018 -0400
@@ -0,0 +1,3106 @@
+##fileformat=VCFv4.2
+##fileDate=20180115
+##source=PLINKv1.90
+##contig=<ID=3,length=19999036>
+##INFO=<ID=PR,Number=0,Type=Flag,Description="Provisional reference allele, may not be based on real reference genome">
+##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
+##SnpEffVersion="4.0e (build 2014-09-13), by Pablo Cingolani"
+##SnpEffCmd="SnpEff  -o vcf -no-downstream -no-upstream myspecies -s /work/GALAXY/galaxy/database/files/071/dataset_71178.dat /work/GALAXY/galaxy/database/files/071/dataset_71176.dat "
+##INFO=<ID=EFF,Number=.,Type=String,Description="Predicted effects for this variant.Format: 'Effect ( Effect_Impact | Functional_Class | Codon_Change | Amino_Acid_Change| Amino_Acid_length | Gene_Name | Transcript_BioType | Gene_Coding | Transcript_ID | Exon_Rank  | Genotype_Number [ | ERRORS | WARNINGS ] )' ">
+##INFO=<ID=LOF,Number=.,Type=String,Description="Predicted loss of function effects for this variant. Format: 'Gene_Name | Gene_ID | Number_of_transcripts_in_gene | Percent_of_transcripts_affected' ">
+##INFO=<ID=NMD,Number=.,Type=String,Description="Predicted nonsense mediated decay effects for this variant. Format: 'Gene_Name | Gene_ID | Number_of_transcripts_in_gene | Percent_of_transcripts_affected' ">
+#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	c88dcbba.0	0b7d031b.0	16ef3c90.0	26863647.0	7f32098d.0	608b0d34.0	46aa9c6a.0	d00c1e13.0	8366125c.0	a358fb3f.0	2a5ee06d.0	df3c89f8.0	78f9e9fe.0	04aca4b5.0	04704bb4.0	5cf82125.0	559cd294.0	98ca16ae.0	1865f890.0	66391666.0	824bd841.0	971d8d35.0	1580b445.0	3476f3f1.0	6fe1d5f1.0	727d7321.0	8a1459b3.0	1a210383.0	2aa697f5.0	a7596568.0	41872470.0	d9a92db4.0	66b6164a.0	5a43ae22.0	6ac8c69b.0	3afe78bc.0	bf19b73d.0	d7e9eece.0	82e8b7f7.0	60121701.0	6cf8dce4.0	3051c486.0	59afa5e3.0	68b91064.0	ae03e236.0	ddaead61.0	aa6cd0c1.0	e1d9a122.0	fb625f89.0	cb0723a4.0	98042619.0	aca14ce9.0	bada3969.0	5efeb5b6.0	fe614ecb.0	bea7cbcf.0	1abb6b2c.0	4506b36e.0	addc58a4.0	f5f3d6ea.0	e1838272.0	d2dd5d08.0	4874cc49.0	a6e508e5.0	61544ce0.0	429e439a.0	522427a2.0	b41ea6b3.0	773db8bf.0	ce7eb496.0	2eafa96f.0	533385bb.0	1f8b989f.0	44fe4cf1.0	07990ed9.0	f40ea464.0	c7913661.0	c54cc672.0	66c5c186.0	c111198a.0	5b45a727.0	de954805.0	2552833e.0	c840a160.0	529e807c.0	1fb8be6d.0	a85f295d.0	cb0c4d54.0	c3b20632.0	3f0e6324.0	178d96de.0	225b17eb.0	99d33763.0	d10e2929.0	8f99b9e2.0	f6801eb5.0	e2606999.0	b308ee1b.0	a7e6bc0f.0	84e1a141.0	bcea78dd.0	e1d1c3b0.0	01a58510.0	9c00ac3a.0	71ad2583.0	ea2ae002.0	bc730b70.0	9c62b49e.0	5da42fd9.0	3b7bddf8.0	45388f1b.0	cd33864f.0	28dd8a58.0	1de0e087.0	07fd6392.0	f8c60a5c.0	25cdd8ae.0	23b0b44c.0	484b2a0f.0	82e17a03.0	be2b0b83.0	260c1d61.0	e30161a0.0	115e701d.0	4c13a3a3.0	08beaab3.0	68f6c96b.0	2d661c20.0	fb2aa5d5.0	2ece01ea.0	e048f5ff.0	ee58d650.0	5872a595.0	5975119a.0	e3fc5497.0	a51b2a39.0	d66638c8.0	a5ef5ab7.0	7d71b69f.0	b4b4df33.0	14d89242.0	9bdaf6eb.0	c949dc7c.0	d4dd88ed.0	8fa373e8.0	eaa3a28a.0	8609fb0e.0	a6d8f1fd.0	be814f56.0	abc6960f.0	832b2be7.0	5776533f.0	3d3f5b4e.0	bc700e39.0	946e0202.0	47c2ea40.0	c86d6702.0	b95ce243.0	2e05f839.0	79ec00de.0	f292fe0a.0	a65ecc2d.0	2b962329.0	718e09f3.0	0a5fbba4.0	89d2c5a0.0	61d7b167.0	2bfcbe44.0	90bc17da.0	65329b91.0	e069425a.0	5325e87e.0	7578b606.0	6fb127b9.0	3b8476cc.0	c8fc9010.0	fd96414a.0	7f0e7041.0	a0c41ad0.0	1e5e8456.0	ab4a346a.0	77bec15a.0	2bca2f34.0	9651d67d.0	9a5569b2.0	b961cc90.0	e42dd51d.0	911f856a.0	53e1db9a.0	e5b216b3.0	18484bd4.0	64f24c90.0	9cbb223a.0	f7e1ce6e.0	9e44e293.0	eac19fb8.0	76f56677.0	87621330.0	dc2cf39b.0	17627a92.0	7126c359.0	c20dfc59.0	cbd6b346.0	f30e146b.0	1510e4aa.0	cf44b628.0	bd7aaa87.0	e8f708a5.0	2b4e06fe.0	3eb8fab5.0	aeed4684.0	328163e1.0	c7aeb39f.0	3e58f34c.0	cc0ef8cf.0	30646147.0	192e24ab.0	5ef1be74.0	71d5fcf4.0	714ac141.0	0f6a67da.0	a796716d.0	a8319fc6.0	93387d96.0	5384be83.0	8fafd383.0	cff871e8.0	2a7724c1.0	773e969e.0	743f41c1.0	1a946dc6.0	9ac72c9e.0	5505a767.0	8cd35626.0	fdd98970.0	86556239.0	44aeff79.0	c7d2513e.0	2a9d8d47.0	39dd7feb.0	c0936cf1.0	5aa7968d.0	73c4fdfb.0	5ae0bd70.0	122a975b.0	2b81cf74.0	9b2223bb.0	bf18cbae.0	16463092.0	7a723d9e.0	c8a73fe7.0	5b144b9c.0	3aa51818.0	4f643bf5.0	3fb62843.0	c0d6eca3.0	43f72773.0
+3	15001183	SNP-3.14999829.	C	A	.	.	PR;EFF=synonymous_variant(LOW||ctA/ctA|p.Leu98Leu/c.294C>A|274|LOC_Os03g26210|protein_coding|CODING|LOC_Os03g26210.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW||ctA/ctA|p.Leu76Leu/c.228C>A|252|LOC_Os03g26210|protein_coding|CODING|LOC_Os03g26210.2|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW||ctA/ctA|p.Leu76Leu/c.228C>A|252|LOC_Os03g26210|protein_coding|CODING|LOC_Os03g26210.3|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15001469	SNP-3.15000115.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gCg/gGg|p.Ala142Gly/c.425A>G|274|LOC_Os03g26210|protein_coding|CODING|LOC_Os03g26210.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME),missense_variant(MODERATE|MISSENSE|gCg/gGg|p.Ala120Gly/c.359A>G|252|LOC_Os03g26210|protein_coding|CODING|LOC_Os03g26210.2|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME),missense_variant(MODERATE|MISSENSE|gCg/gGg|p.Ala120Gly/c.359A>G|252|LOC_Os03g26210|protein_coding|CODING|LOC_Os03g26210.3|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0
+3	15002088	SNP-3.15000734.	A	G	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||219|c.*219A>G|274|LOC_Os03g26210|protein_coding|CODING|LOC_Os03g26210.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME),3_prime_UTR_variant(MODIFIER||219|c.*219A>G|252|LOC_Os03g26210|protein_coding|CODING|LOC_Os03g26210.2|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME),3_prime_UTR_variant(MODIFIER||219|c.*219A>G|252|LOC_Os03g26210|protein_coding|CODING|LOC_Os03g26210.3|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/1	0/1	1/1	1/1	0/0	0/0	./.	./.	1/1	1/1	1/1	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/1	0/0	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/1	1/1	0/1	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/1	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	1/1	0/1	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0
+3	15002962	SNP-3.15001608.	C	A	.	.	PR;EFF=synonymous_variant(LOW||Tca/Tca|p.Ser189Ser/c.565G>T|309|LOC_Os03g26220|protein_coding|CODING|LOC_Os03g26220.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	15006811	SNP-3.15005457.	C	A	.	.	PR;EFF=5_prime_UTR_variant(MODIFIER||2|c.-2C>A|72|LOC_Os03g26229|protein_coding|CODING|LOC_Os03g26229.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/1	0/0	0/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	1/1	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	15008914	SNP-3.15007560.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ctG/ctT|p.Leu34Leu/c.102G>T|86|LOC_Os03g26240|protein_coding|CODING|LOC_Os03g26240.1|2|1)	GT	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	./.	./.	1/1	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/1	0/1	0/1	0/0	0/0	0/0	0/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1
+3	15009272	SNP-3.15007918.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.28+154T>C|86|LOC_Os03g26240|protein_coding|CODING|LOC_Os03g26240.1|1|1)	GT	1/1	0/1	0/1	1/1	0/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/1	./.	0/0	0/1	1/1	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/1	./.	0/1	0/0	1/1	0/1	0/0	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/1	./.	1/1	1/1	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/1	0/1	1/1	0/1	0/0	1/1	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/1	1/1
+3	15009454	SNP-3.15008100.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0
+3	15010303	SNP-3.15008949.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	./.	1/1	1/1	1/1	0/1	0/1	0/1	0/1	0/1	0/1	0/0	0/1	0/1	0/1	0/1	1/1	0/1	0/1	0/1	0/1	0/1	0/1	./.	0/1	0/1	0/1	0/1	1/1	1/1	0/1	1/1	1/1	0/1	0/0	0/1	0/0	0/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/1	0/1	0/1	0/1	1/1	0/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	./.	0/0	1/1	1/1	1/1	0/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/1	0/1	0/1	1/1	./.	1/1	0/1	0/1	0/1	0/1	0/1	0/1	0/1	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	./.	1/1
+3	15012222	SNP-3.15010868.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	0/1	0/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0
+3	15013793	SNP-3.15012439.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	./.	1/1	0/1	0/0	1/1	1/1	1/1	./.	./.	./.	./.	1/1	0/0	0/1	0/1	0/1	./.	1/1	1/1	0/0	./.	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	./.	./.	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15016928	SNP-3.15015574.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cGc/cAc|p.Arg29His/c.86C>A|827|LOC_Os03g26260|protein_coding|CODING|LOC_Os03g26260.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	1/1	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	15016994	SNP-3.15015640.	A	G	.	.	PR;EFF=synonymous_variant(LOW||aGg/aGg|p.Arg51Arg/c.152A>G|827|LOC_Os03g26260|protein_coding|CODING|LOC_Os03g26260.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15017069	SNP-3.15015715.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|tCt/tGt|p.Ser76Cys/c.227A>G|827|LOC_Os03g26260|protein_coding|CODING|LOC_Os03g26260.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	15017825	SNP-3.15016471.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.233+750A>G|827|LOC_Os03g26260|protein_coding|CODING|LOC_Os03g26260.1|2|1)	GT	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	15021297	SNP-3.15019943.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cCc/cGc|p.Pro159Arg/c.476A>G|827|LOC_Os03g26260|protein_coding|CODING|LOC_Os03g26260.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	./.	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	0/0	./.	1/1	0/0	1/1	1/1	0/0	1/1	./.	./.	1/1	./.	1/1	1/1	0/0	0/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	./.	0/1	./.	0/0	0/0	0/0	./.	./.	./.	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	./.	./.	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	0/0	0/0	./.	1/1	./.	1/1	1/1	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	15021415	SNP-3.15020061.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|atA/atG|p.Ile198Met/c.594A>G|827|LOC_Os03g26260|protein_coding|CODING|LOC_Os03g26260.1|3|1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0
+3	15021478	SNP-3.15020124.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|gtC/gtG|p.Val219Val/c.657A>G|827|LOC_Os03g26260|protein_coding|CODING|LOC_Os03g26260.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1
+3	15021637	SNP-3.15020283.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|gcC/gcG|p.Ala272Ala/c.816A>G|827|LOC_Os03g26260|protein_coding|CODING|LOC_Os03g26260.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/1	0/0	./.	0/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0
+3	15022555	SNP-3.15021201.	A	G	.	.	PR;EFF=synonymous_variant(LOW||ccG/ccG|p.Pro578Pro/c.1734A>G|827|LOC_Os03g26260|protein_coding|CODING|LOC_Os03g26260.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	./.	0/0	./.	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/1	./.	1/1	./.	./.	1/1	1/1	1/1	0/0	1/1	./.	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/1	0/1	0/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/1	0/0	1/1	0/1	./.	0/0	0/0	0/1	./.	0/0	1/1	./.	./.	1/1	1/1	0/1	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	./.	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0	./.	1/1	./.	0/0	1/1	./.	0/0	./.	0/0	0/0	1/1	./.	0/0	./.	0/0	./.	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	1/1
+3	15022888	SNP-3.15021534.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|caC/caG|p.His689Gln/c.2067A>G|827|LOC_Os03g26260|protein_coding|CODING|LOC_Os03g26260.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/1	./.	1/1	0/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	./.	1/1	0/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	1/1
+3	15023579	SNP-3.15022225.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15025795	SNP-3.15024441.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/1	0/0	0/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	15029041	SNP-3.15027687.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/1	./.	0/1	0/1	0/0	0/0	0/1	0/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/1	0/0	0/0	0/1	0/0	./.	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/0
+3	15029887	SNP-3.15028533.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cTt/cGt|p.Leu65Arg/c.194A>G|84|LOC_Os03g26280|protein_coding|CODING|LOC_Os03g26280.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	./.	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	1/1	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1
+3	15030098	SNP-3.15028744.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.207+198A>G|84|LOC_Os03g26280|protein_coding|CODING|LOC_Os03g26280.1|1|1)	GT	0/0	0/1	0/1	0/1	0/1	0/0	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/1	1/1	0/0	1/1	0/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15031273	SNP-3.15029919.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15032589	SNP-3.15031235.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	./.	0/1	0/0	0/0	1/1	./.	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/1	./.	1/1	1/1	./.	./.	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	./.	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	0/1	0/0	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/1	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	1/1
+3	15032652	SNP-3.15031298.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	./.	0/0	0/0	1/1	0/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/1	./.	0/0	0/0	1/1	0/0
+3	15033259	SNP-3.15031905.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/1	./.	./.	0/0	0/0	./.	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	15041164	SNP-3.15039810.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	./.	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/1	0/0	0/0	0/0
+3	15045891	SNP-3.15044537.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/1	./.	./.	./.	./.	0/1	0/0	./.	./.	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/1	./.	./.	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	./.	./.	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	1/1	./.	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/1	1/1	1/1	./.	0/0	1/1	0/1	0/1	0/1	0/1	./.	0/1	./.	1/1	0/0	./.	1/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/1	0/0	./.	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	1/1
+3	15048277	SNP-3.15046923.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gTt/gAt|p.Val482Asp/c.1445C>A|1310|LOC_Os03g26329|protein_coding|CODING|LOC_Os03g26329.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1
+3	15048568	SNP-3.15047214.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cCc/cGc|p.Pro579Arg/c.1736A>G|1310|LOC_Os03g26329|protein_coding|CODING|LOC_Os03g26329.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	./.	1/1	0/1	1/1	./.	1/1	./.	0/0	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	1/1	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	1/1	./.	0/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	./.	1/1	./.	1/1	1/1	0/0	0/0
+3	15063744	SNP-3.15062390.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15063983	SNP-3.15062629.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	./.	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/1	0/0	1/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1
+3	15064067	SNP-3.15062713.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0
+3	15064405	SNP-3.15063051.	A	G	.	.	PR;EFF=synonymous_variant(LOW||Ggt/Ggt|p.Gly37Gly/c.109A>G|840|LOC_Os03g26350|protein_coding|CODING|LOC_Os03g26350.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0
+3	15065635	SNP-3.15064281.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Tgg/Ggg|p.Trp166Gly/c.496A>G|840|LOC_Os03g26350|protein_coding|CODING|LOC_Os03g26350.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/1	./.	0/0	0/1	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/1	1/1	0/1	1/1	0/0	0/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	0/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	1/1	0/0	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0
+3	15065828	SNP-3.15064474.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.515+174A>G|840|LOC_Os03g26350|protein_coding|CODING|LOC_Os03g26350.1|4|1)	GT	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	0/1	0/1	0/0	1/1	0/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	1/1	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	./.	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1
+3	15067575	SNP-3.15066221.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.516-13A>G|840|LOC_Os03g26350|protein_coding|CODING|LOC_Os03g26350.1|4|1)	GT	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	0/0	0/1	1/1	0/0	0/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	0/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/1	0/0	0/0	0/0	0/1	0/0	./.	0/1	0/0	0/0	0/1	0/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1
+3	15067632	SNP-3.15066278.	A	G	.	.	PR;EFF=stop_gained(HIGH|NONSENSE|tCa/tGa|p.Ser187*/c.560A>G|840|LOC_Os03g26350|protein_coding|CODING|LOC_Os03g26350.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME);LOF=(LOC_Os03g26350|LOC_Os03g26350|1|1.00);NMD=(LOC_Os03g26350|LOC_Os03g26350|1|1.00)	GT	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	0/0	0/1	1/1	0/0	0/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	0/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/1	0/0	0/0	0/0	0/1	0/0	0/1	0/1	0/0	0/0	0/1	0/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1
+3	15067704	SNP-3.15066350.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cCa/cGa|p.Pro211Arg/c.632A>G|840|LOC_Os03g26350|protein_coding|CODING|LOC_Os03g26350.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	0/1	0/0	0/0	1/1	0/1	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	0/1	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/1	0/1	0/0	./.	0/0	0/0	0/1	./.	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	./.	0/0	0/0
+3	15067776	SNP-3.15066422.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gTt/gGt|p.Val235Gly/c.704A>G|840|LOC_Os03g26350|protein_coding|CODING|LOC_Os03g26350.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	./.	1/1	0/0	1/1	1/1	1/1	0/0	./.	./.	0/0	0/1	./.	./.	./.	./.	1/1	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	./.	0/0	0/0	./.	./.	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/1	./.	1/1	1/1	1/1	0/0	./.	1/1	./.	1/1	./.	0/0	0/0	./.	1/1	./.	./.	1/1	0/1	0/0	1/1	1/1	./.	./.	0/0	0/0	0/1	./.	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	1/1	1/1	./.	./.	./.	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	1/1
+3	15067863	SNP-3.15066509.	C	A	.	.	PR;EFF=synonymous_variant(LOW||cAc/cAc|p.His264His/c.791C>A|840|LOC_Os03g26350|protein_coding|CODING|LOC_Os03g26350.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	0/1	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15067938	SNP-3.15066584.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cCt/cGt|p.Pro289Arg/c.866A>G|840|LOC_Os03g26350|protein_coding|CODING|LOC_Os03g26350.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/1	1/1	1/1	./.	./.	1/1	1/1	1/1	0/1	0/0	0/1	1/1	0/0	0/1	0/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/1	0/0	0/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/1	0/0	./.	0/1	0/0	0/0	./.	0/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1
+3	15067978	SNP-3.15066624.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|agT/agG|p.Ser302Arg/c.906A>G|840|LOC_Os03g26350|protein_coding|CODING|LOC_Os03g26350.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	0/1	0/1	1/1	0/0	0/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/1	0/0	1/1	0/1	0/0	0/0	0/1	0/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.
+3	15068177	SNP-3.15066823.	A	G	.	.	PR;EFF=synonymous_variant(LOW||Gca/Gca|p.Ala369Ala/c.1105A>G|840|LOC_Os03g26350|protein_coding|CODING|LOC_Os03g26350.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	0/0	0/1	1/1	0/0	0/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	0/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/1	0/0	0/1	0/1	0/0	0/0	0/1	0/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1
+3	15068200	SNP-3.15066846.	A	G	.	.	PR;EFF=stop_gained(HIGH|NONSENSE|taT/taG|p.Tyr376*/c.1128A>G|840|LOC_Os03g26350|protein_coding|CODING|LOC_Os03g26350.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME);LOF=(LOC_Os03g26350|LOC_Os03g26350|1|1.00);NMD=(LOC_Os03g26350|LOC_Os03g26350|1|1.00)	GT	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1
+3	15068596	SNP-3.15067242.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|tgC/tgG|p.Cys452Trp/c.1356A>G|840|LOC_Os03g26350|protein_coding|CODING|LOC_Os03g26350.1|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0
+3	15069419	SNP-3.15068065.	A	G	.	.	PR;EFF=synonymous_variant(LOW||Gga/Gga|p.Gly696Gly/c.2086A>G|840|LOC_Os03g26350|protein_coding|CODING|LOC_Os03g26350.1|7|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	./.	0/0	0/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15069431	SNP-3.15068077.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Cct/Gct|p.Pro700Ala/c.2098A>G|840|LOC_Os03g26350|protein_coding|CODING|LOC_Os03g26350.1|7|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	0/0	./.	./.	1/1	0/0	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	./.	0/0	./.	1/1	0/0	./.	./.	./.	0/0	./.	./.	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0
+3	15069683	SNP-3.15068329.	A	G	.	.	PR;EFF=splice_donor_variant(HIGH|||c.2267A>G|840|LOC_Os03g26350|protein_coding|CODING|LOC_Os03g26350.1|8|1),intron_variant(MODIFIER|||c.2266+1A>G|840|LOC_Os03g26350|protein_coding|CODING|LOC_Os03g26350.1|8|1);LOF=(LOC_Os03g26350|LOC_Os03g26350|1|1.00)	GT	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	15069856	SNP-3.15068502.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.2266+174A>G|840|LOC_Os03g26350|protein_coding|CODING|LOC_Os03g26350.1|8|1)	GT	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15069889	SNP-3.15068535.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.2266+207A>G|840|LOC_Os03g26350|protein_coding|CODING|LOC_Os03g26350.1|8|1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/1	0/1	0/0	0/0
+3	15070071	SNP-3.15068717.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.2267-189A>G|840|LOC_Os03g26350|protein_coding|CODING|LOC_Os03g26350.1|8|1)	GT	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/1	./.	0/0	1/1	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	./.	./.	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0
+3	15070205	SNP-3.15068851.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.2267-55A>G|840|LOC_Os03g26350|protein_coding|CODING|LOC_Os03g26350.1|8|1)	GT	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	0/0	0/1	1/1	0/0	./.	0/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	15070559	SNP-3.15069205.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	1/1	0/1	0/1	0/0	0/1	0/0	0/1	0/1	0/1	0/0	./.	./.	0/0	./.	0/0	0/1	0/0	0/0	./.	0/1	0/1	0/0	./.	0/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/1	0/1	./.	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/1	0/0	0/1	0/1	0/1	./.	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/1	0/0	./.	./.	0/1	./.	0/0	./.	./.	./.	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/0
+3	15070657	SNP-3.15069303.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/1	0/0	0/0	1/1	0/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	0/0	0/1	1/1	0/0	0/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	./.	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	1/1	1/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/1	0/0	./.	0/1	0/1	0/0	0/1	0/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/1
+3	15071721	SNP-3.15070367.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Ttg/Gtg|p.Leu124Val/c.370A>G|515|LOC_Os03g26360|protein_coding|CODING|LOC_Os03g26360.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	./.	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	./.	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/1	1/1	0/0	0/0	./.	0/1	1/1	0/0	0/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1
+3	15071916	SNP-3.15070562.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aCa/aGa|p.Thr163Arg/c.488A>G|515|LOC_Os03g26360|protein_coding|CODING|LOC_Os03g26360.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/1	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	0/1	1/1	0/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0
+3	15072360	SNP-3.15071006.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.817+115A>G|515|LOC_Os03g26360|protein_coding|CODING|LOC_Os03g26360.1|5|1)	GT	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	0/0	0/1	1/1	0/0	0/1	0/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	0/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/1	0/1	0/0	0/0	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1
+3	15072470	SNP-3.15071116.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.817+225A>G|515|LOC_Os03g26360|protein_coding|CODING|LOC_Os03g26360.1|5|1)	GT	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.
+3	15072855	SNP-3.15071501.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.817+610A>G|515|LOC_Os03g26360|protein_coding|CODING|LOC_Os03g26360.1|5|1)	GT	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	./.	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1
+3	15073143	SNP-3.15071789.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.818-652A>G|515|LOC_Os03g26360|protein_coding|CODING|LOC_Os03g26360.1|5|1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	0/1	0/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	./.	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	15073653	SNP-3.15072299.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.818-142A>G|515|LOC_Os03g26360|protein_coding|CODING|LOC_Os03g26360.1|5|1)	GT	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	0/0	0/1	1/1	0/0	./.	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/1	0/1	0/0	0/0	0/0	./.	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1
+3	15073924	SNP-3.15072570.	A	G	.	.	PR;EFF=stop_gained(HIGH|NONSENSE|tCa/tGa|p.Ser316*/c.947A>G|515|LOC_Os03g26360|protein_coding|CODING|LOC_Os03g26360.1|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME);LOF=(LOC_Os03g26360|LOC_Os03g26360|1|1.00);NMD=(LOC_Os03g26360|LOC_Os03g26360|1|1.00)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	15074046	SNP-3.15072692.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Cgt/Ggt|p.Arg340Gly/c.1018A>G|515|LOC_Os03g26360|protein_coding|CODING|LOC_Os03g26360.1|7|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	1/1	0/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	./.	./.	0/0	0/0
+3	15075268	SNP-3.15073914.	A	G	.	.	PR;EFF=synonymous_variant(LOW||Gaa/Gaa|p.Glu510Glu/c.1528A>G|515|LOC_Os03g26360|protein_coding|CODING|LOC_Os03g26360.1|9|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	1/1	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	15076823	SNP-3.15075469.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	1/1	0/1	0/0	0/1	./.	1/1	1/1	0/1	1/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/1	0/1	./.	0/1	./.	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/1	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	./.	0/1	0/0
+3	15092922	SNP-3.15091568.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	./.	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/1	./.	0/0	0/0	./.	1/1	0/0	1/1	1/1	0/0	0/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0
+3	15093289	SNP-3.15091935.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/1	0/0	1/1	0/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	./.	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0
+3	15094063	SNP-3.15092709.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/1	0/1	0/0	0/0	1/1	1/1	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1
+3	15095753	SNP-3.15094399.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	1/1	0/1	0/0	./.	./.	0/0	1/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	0/0	1/1	./.	1/1	1/1	0/0	./.	0/0	0/1	1/1	0/1	0/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	./.	0/1	./.	0/0	0/0	0/0	0/0	./.	0/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/1	1/1	0/1	./.	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/1	0/0	0/1	0/0	./.	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	1/1	./.	0/0	./.	0/1	0/0	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	1/1
+3	15097742	SNP-3.15096388.	A	G	.	.	PR;EFF=synonymous_variant(LOW||cGa/cGa|p.Arg209Arg/c.626A>G|220|LOC_Os03g26420|protein_coding|CODING|LOC_Os03g26420.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	0/1	0/0	./.	0/0	./.	./.	./.	./.	0/0	0/1	./.	0/1	./.	./.	./.	./.	1/1	./.	0/1	./.	./.	0/1	1/1	1/1	0/1	./.	0/1	1/1	1/1	1/1	./.	0/1	1/1	./.	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	./.	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/0	0/1	1/1	0/1	0/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	./.	./.	0/1	0/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/1	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	./.	./.	0/0	0/0
+3	15098539	SNP-3.15097185.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	0/1	./.	0/0	./.	0/0	1/1	0/0	1/1	./.	1/1	1/1	./.	1/1	./.	0/0	0/0	1/1	./.	./.	./.	./.	1/1	0/0	./.	1/1	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	1/1	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	./.	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	./.	1/1	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	./.	./.	./.	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	./.	1/1	1/1	./.	0/0
+3	15104295	SNP-3.15102941.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0
+3	15105593	SNP-3.15104239.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	15105921	SNP-3.15104567.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	0/1	./.	0/0	1/1	1/1	./.	./.	1/1	1/1	1/1	0/1	./.	1/1	1/1	0/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	./.	0/0
+3	15106183	SNP-3.15104829.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/1	1/1	./.	0/0	0/1	./.	1/1	0/0	0/0	0/0	0/0	0/1	./.	./.	0/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/1	0/0	./.	0/0	./.	./.	0/1	0/1	./.	1/1	1/1	0/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/1	0/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/1	0/0
+3	15108121	SNP-3.15106767.	A	G	.	.	PR;EFF=synonymous_variant(LOW||cGa/cGa|p.Arg92Arg/c.275A>G|411|LOC_Os03g26440|protein_coding|CODING|LOC_Os03g26440.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	./.	0/0	./.	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	./.	./.	./.	./.	1/1	1/1	./.	1/1	./.	./.	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	./.	1/1	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	./.	./.	./.	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	0/0	1/1	1/1	./.	0/0
+3	15108954	SNP-3.15107600.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.468+106A>G|411|LOC_Os03g26440|protein_coding|CODING|LOC_Os03g26440.1|6|1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0
+3	15112916	SNP-3.15111562.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.1157-616C>A|411|LOC_Os03g26440|protein_coding|CODING|LOC_Os03g26440.1|14|1)	GT	0/0	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0
+3	15116227	SNP-3.15114873.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|tcC/tcA|p.Ser85Ser/c.255C>A|252|LOC_Os03g26450|protein_coding|CODING|LOC_Os03g26450.1|3|1)	GT	0/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	./.	0/1	./.	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/1	./.	0/0	./.	0/0	0/1	0/0	0/1	0/0	0/0	0/0	./.	0/1	./.	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/1	./.	0/0	0/1	0/0	0/0	./.	./.	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/1	0/1	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/1	./.	./.	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/1	./.	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	15117473	SNP-3.15116119.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.580-207A>G|252|LOC_Os03g26450|protein_coding|CODING|LOC_Os03g26450.1|6|1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0
+3	15118197	SNP-3.15116843ga.	C	A	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||219|c.*219C>A|252|LOC_Os03g26450|protein_coding|CODING|LOC_Os03g26450.1|8|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/1	./.	0/0	1/1	0/0	0/1	0/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	0/1	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/1	1/1	0/0	1/1	0/1	./.	1/1	./.	1/1	0/1	0/0	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/0	1/1	0/1	./.	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/1	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/1	0/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/1	1/1	0/1	0/0
+3	15118218	SNP-3.15116864.	C	A	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||240|c.*240C>A|252|LOC_Os03g26450|protein_coding|CODING|LOC_Os03g26450.1|8|1)	GT	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15120220	SNP-3.15118866.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.614-34T>C|260|LOC_Os03g26460|protein_coding|CODING|LOC_Os03g26460.1|3|1),intron_variant(MODIFIER|||c.614-34T>C|247|LOC_Os03g26460|protein_coding|CODING|LOC_Os03g26460.2|3|1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	15122456	SNP-3.15121102.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15123271	SNP-3.15121917.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	./.	0/1	./.	0/0	0/0	./.	./.	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0
+3	15123515	SNP-3.15122161.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15124843	SNP-3.15123489.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|acC/acG|p.Thr141Thr/c.423A>G|429|LOC_Os03g26480|protein_coding|CODING|LOC_Os03g26480.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	./.	1/1	1/1	0/1	0/0
+3	15126492	SNP-3.15125138.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Cca/Gca|p.Pro242Ala/c.724A>G|429|LOC_Os03g26480|protein_coding|CODING|LOC_Os03g26480.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	./.	./.	0/0	./.	1/1	0/0	0/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	1/1
+3	15131782	SNP-3.15130428.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gAc/gTc|p.Asp119Val/c.356G>T|249|LOC_Os03g26500|protein_coding|CODING|LOC_Os03g26500.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	1/1	0/0
+3	15134720	SNP-3.15133366.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	1/1	0/0	./.	1/1	1/1	1/1	./.	0/0	./.	./.	./.	1/1	0/0	0/1	1/1	1/1	./.	./.	1/1	0/1	./.	1/1	0/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	0/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15134837	SNP-3.15133483.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	1/1	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15135234	SNP-3.15133880.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	./.	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	15135562	SNP-3.15134208.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	0/0	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/1	0/0	./.	0/1	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	15135826	SNP-3.15134472.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15137113	SNP-3.15135759.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15138175	SNP-3.15136821.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	./.	1/1	./.	./.	1/1	0/0	./.	1/1	./.	0/0	1/1	./.	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	./.	./.	./.	0/0	./.	0/0	0/0	1/1	./.	0/0	1/1	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	1/1	0/0	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	./.	0/0	0/0	1/1	./.	0/0	./.	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0
+3	15140186	SNP-3.15138832.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/1	0/0	./.	0/0	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0
+3	15141993	SNP-3.15140639.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15142981	SNP-3.15141627.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15145671	SNP-3.15144317.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	15146229	SNP-3.15144875.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	1/1	1/1	0/1	0/0	0/0	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	15146763	SNP-3.15145409.	C	A	.	.	PR;EFF=splice_acceptor_variant(HIGH|||c.491G>T|201|LOC_Os03g26520|protein_coding|CODING|LOC_Os03g26520.1|2|1),intron_variant(MODIFIER|||c.491-2G>T|201|LOC_Os03g26520|protein_coding|CODING|LOC_Os03g26520.1|1|1);LOF=(LOC_Os03g26520|LOC_Os03g26520|1|1.00)	GT	0/0	1/1	./.	1/1	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15146784	SNP-3.15145430.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.491-23T>C|201|LOC_Os03g26520|protein_coding|CODING|LOC_Os03g26520.1|1|1)	GT	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0
+3	15147681	SNP-3.15146327.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0
+3	15151367	SNP-3.15150013.	C	A	.	.	PR;EFF=synonymous_variant(LOW||tAt/tAt|p.Tyr454Tyr/c.1361C>A|467|LOC_Os03g26530|protein_coding|CODING|LOC_Os03g26530.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	./.	1/1	1/1	0/0	0/1	0/1	0/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	0/0	0/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	0/1	1/1	./.	1/1	0/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/1	0/1	1/1	0/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/1	0/0
+3	15151714	SNP-3.15150360.	A	G	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||304|c.*304A>G|467|LOC_Os03g26530|protein_coding|CODING|LOC_Os03g26530.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	0/0	0/1	1/1	./.	1/1	./.	1/1	0/1	0/0	./.	0/1	0/1	./.	./.	0/1	0/0	1/1	./.	./.	./.	1/1	0/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	./.	./.	1/1	0/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/1	1/1	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	0/0	1/1	1/1	./.	0/0	0/0	0/1	0/0	0/0	1/1	0/0	./.	1/1	./.	0/0	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	./.	./.	0/0	./.
+3	15154622	SNP-3.15153268.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	15155173	SNP-3.15153819.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	./.	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	0/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	1/1	0/0	./.	0/0	./.	1/1	./.	./.	0/0	0/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	0/0	1/1
+3	15155827	SNP-3.15154473.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/1	0/0	1/1	0/0	0/1	./.	0/1	0/1	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	./.	0/1	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	1/1	./.	1/1	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/0	./.	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0
+3	15155951	SNP-3.15154597.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/1	./.	1/1	0/0	0/1	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	1/1
+3	15158042	SNP-3.15156688.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	./.	./.	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	./.	./.	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	./.	./.	./.	./.	./.	./.	0/0	./.	1/1	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0
+3	15163259	SNP-3.15161905.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	./.	./.	0/0	./.	./.	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	./.	1/1	./.	0/0	0/0	./.	0/0	./.	0/0	1/1	1/1	0/0	./.	0/0	0/1	./.	1/1	./.	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/1	./.	0/0	./.	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	1/1	./.	./.	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0
+3	15163904	SNP-3.15162550.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	0/1	./.	0/0	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	0/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	1/1	./.	1/1	./.	./.	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1
+3	15164146	SNP-3.15162792.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1
+3	15164772	SNP-3.15163418.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	15165486	SNP-3.15164132.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gTg/gGg|p.Val9Gly/c.26A>G|75|LOC_Os03g26550|protein_coding|CODING|LOC_Os03g26550.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/1	0/0	0/0	./.	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/1	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	1/1
+3	15165606	SNP-3.15164252.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aTg/aGg|p.Met49Arg/c.146A>G|75|LOC_Os03g26550|protein_coding|CODING|LOC_Os03g26550.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	1/1	0/1	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/1	./.	0/0	0/0	0/0	./.	./.	0/1	0/0	0/1	0/0	0/1	0/0	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/1	0/0	0/1	1/1	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	./.	0/0	./.	./.	./.	0/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	./.	1/1	0/0	0/0	0/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	./.	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1
+3	15165621	SNP-3.15164267.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gAt/gGt|p.Asp54Gly/c.161A>G|75|LOC_Os03g26550|protein_coding|CODING|LOC_Os03g26550.1|1|1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/1	./.	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	0/1	1/1	0/0	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/1	0/1	./.	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	./.	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/1	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	1/1
+3	15165706	SNP-3.15164352.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.170-19A>G|75|LOC_Os03g26550|protein_coding|CODING|LOC_Os03g26550.1|1|1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	0/1	./.	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	./.	./.	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	0/0	1/1
+3	15177294	SNP-3.15175940.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/1	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/1	0/0	1/1
+3	15177335	SNP-3.15175981.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	./.	./.	0/1	0/0	0/0	./.	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/1	1/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	1/1
+3	15178305	SNP-3.15176951.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0
+3	15178849	SNP-3.15177495.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	./.	1/1	./.	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	15178882	SNP-3.15177528.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cTt/cAt|p.Leu4His/c.11C>A|1094|LOC_Os03g26570|protein_coding|CODING|LOC_Os03g26570.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	./.	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	./.	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	./.	0/0	./.	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	./.	./.	./.	0/0	0/0	1/1	1/1	./.	1/1	./.	1/1	./.	./.	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	1/1	./.	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	15180161	SNP-3.15178807.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Ttc/Atc|p.Phe279Ile/c.835C>A|1094|LOC_Os03g26570|protein_coding|CODING|LOC_Os03g26570.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	1/1	./.	1/1	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	0/0	./.	1/1	./.	./.	0/0	./.	./.	./.	./.	1/1	1/1	1/1	1/1	./.	./.	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	15180305	SNP-3.15178951.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Cag/Gag|p.Gln327Glu/c.979A>G|1094|LOC_Os03g26570|protein_coding|CODING|LOC_Os03g26570.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	0/0	1/1	0/0	1/1	1/1	./.	./.	./.	1/1	1/1	1/1	./.	0/0	./.	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	./.	0/0	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	0/0	./.	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	15180782	SNP-3.15179428.	C	A	.	.	PR;EFF=synonymous_variant(LOW||Agc/Agc|p.Ser486Ser/c.1456C>A|1094|LOC_Os03g26570|protein_coding|CODING|LOC_Os03g26570.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	1/1	./.	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	./.	./.	0/0	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	./.	1/1	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	1/1	1/1	1/1	./.	0/0	./.	./.	./.	0/0	./.	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	15181560	SNP-3.15180206.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aCt/aGt|p.Thr691Ser/c.2072A>G|1094|LOC_Os03g26570|protein_coding|CODING|LOC_Os03g26570.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/1	0/0	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	./.	1/1	./.	0/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	./.	1/1	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	15181674	SNP-3.15180320.	C	A	.	.	PR;EFF=synonymous_variant(LOW||gAc/gAc|p.Asp729Asp/c.2186C>A|1094|LOC_Os03g26570|protein_coding|CODING|LOC_Os03g26570.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	0/0	1/1	./.	./.	./.	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	1/1	./.	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0
+3	15182020	SNP-3.15180666.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aaT/aaA|p.Asn809Lys/c.2427C>A|1094|LOC_Os03g26570|protein_coding|CODING|LOC_Os03g26570.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME),splice_region_variant(LOW|||c.2427C>A|1094|LOC_Os03g26570|protein_coding|CODING|LOC_Os03g26570.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	./.	./.	./.	./.	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	./.	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	./.
+3	15182293	SNP-3.15180939.	C	A	.	.	PR;EFF=stop_gained(HIGH|NONSENSE|taT/taA|p.Tyr900*/c.2700C>A|1094|LOC_Os03g26570|protein_coding|CODING|LOC_Os03g26570.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME);LOF=(LOC_Os03g26570|LOC_Os03g26570|1|1.00);NMD=(LOC_Os03g26570|LOC_Os03g26570|1|1.00)	GT	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	./.	./.	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	./.	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15183245	SNP-3.15181891.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	15183327	SNP-3.15181973.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	0/1	1/1	0/0	./.	1/1	1/1	./.	./.	0/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/1	./.	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	./.	./.	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1
+3	15183542	SNP-3.15182188.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	./.	./.	./.	./.	0/0	./.	0/1	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	0/0	0/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/1	./.	1/1	1/1	./.	./.	0/1	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	1/1	1/1	0/0	1/1	0/0	./.	./.	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1
+3	15185690	SNP-3.15184336.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	./.	./.	0/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/1	./.	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	0/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0
+3	15185780	SNP-3.15184426.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/0	1/1
+3	15186485	SNP-3.15185131.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	./.	1/1	0/0	./.	./.	./.	./.	./.	./.	1/1	./.	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	./.	./.	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	15186576	SNP-3.15185222.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	./.	./.	./.	./.	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	1/1	./.	1/1	./.	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	./.	0/0	0/0	./.	0/0
+3	15187562	SNP-3.15186208.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	./.	1/1	0/0	./.	1/1	./.	1/1	0/0	./.	0/0	1/1	1/1	1/1	./.	1/1	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	./.	./.	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	./.	./.	./.	0/0	./.	./.	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	./.	1/1	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	./.	1/1	1/1	./.	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	./.
+3	15187944	SNP-3.15186590.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0
+3	15188301	SNP-3.15186947.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	./.	0/1	./.	0/1	0/1	1/1	./.	0/0	1/1	./.	1/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/1	./.	1/1	./.	1/1	1/1	0/1	1/1	1/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	1/1	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	1/1	./.	./.	0/1	1/1
+3	15189650	SNP-3.15188296.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.-164-104A>G|174|LOC_Os03g26590|protein_coding|CODING|LOC_Os03g26590.1|1|1)	GT	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	./.	1/1	./.	1/1	1/1	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	0/0	0/0	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	0/0	./.	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	./.	./.	./.	1/1	./.	./.	./.	1/1	./.	0/0	0/0	1/1	0/0	./.	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1
+3	15189903	SNP-3.15188549.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.-94+79A>G|174|LOC_Os03g26590|protein_coding|CODING|LOC_Os03g26590.1|2|1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	./.	0/0	0/0	./.	0/0	0/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	./.	./.	./.	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0
+3	15190247	SNP-3.15188893.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.-94+423C>A|174|LOC_Os03g26590|protein_coding|CODING|LOC_Os03g26590.1|2|1)	GT	0/0	1/1	1/1	1/1	0/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/1	./.	./.	0/0	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/1	0/0	1/1	./.	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0
+3	15194289	SNP-3.15192935.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.-93-62A>G|174|LOC_Os03g26590|protein_coding|CODING|LOC_Os03g26590.1|2|1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	15194367	SNP-3.15193013.	A	G	.	.	PR;EFF=5_prime_UTR_premature_start_codon_gain_variant(LOW||||174|LOC_Os03g26590|protein_coding|CODING|LOC_Os03g26590.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME),5_prime_UTR_variant(MODIFIER||77|c.-77A>G|174|LOC_Os03g26590|protein_coding|CODING|LOC_Os03g26590.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/1	./.	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/1	0/0	0/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/1	0/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1
+3	15199663	SNP-3.15198309.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	1/1	1/1	0/0	./.	./.	1/1	0/1	./.	./.	0/1	1/1	./.	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/1	./.	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	./.	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	15199752	SNP-3.15198398.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	./.	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	15199829	SNP-3.15198475.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	15201959	SNP-3.15200605.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	15202420	SNP-3.15201066.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	0/0	0/0	./.	./.	0/0	./.	./.	./.	./.	0/0	./.	0/0	./.	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	1/1	0/0	0/0	./.	./.	1/1	0/0	0/0	1/1	./.	./.	0/0	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	./.	./.	./.	0/0	0/0	./.	./.	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	./.	./.	./.	./.	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	1/1	1/1	./.	./.	1/1	./.	0/0	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	./.	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	1/1	1/1	1/1	0/0	./.	1/1
+3	15206365	SNP-3.15205011.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aAg/aGg|p.Lys329Arg/c.986A>G|497|LOC_Os03g26610|protein_coding|CODING|LOC_Os03g26610.1|5|1)	GT	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	1/1	./.	./.	1/1	./.	./.	1/1	./.	./.	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/1	./.	0/0	./.	1/1	./.	1/1	./.	1/1	1/1	./.	./.	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	./.	./.	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	1/1	0/0	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	1/1
+3	15208339	SNP-3.15206985.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/1	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	./.	0/0
+3	15208375	SNP-3.15207021.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0
+3	15208508	SNP-3.15207154.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/0	1/1
+3	15210667	SNP-3.15209313.	C	A	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||356|c.*356C>A|472|LOC_Os03g26620|protein_coding|CODING|LOC_Os03g26620.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	./.	1/1	0/1	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/1	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	0/1	./.	0/0	0/1	0/0	0/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	15210787	SNP-3.15209433.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	0/1	1/1	0/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	15212642	SNP-3.15211288.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	./.	./.	0/1	0/1	1/1	1/1	0/1	0/0	0/1	0/1	0/1	0/1	0/1	0/1	0/1	./.	./.	./.	./.	1/1	0/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	./.	0/1	./.	0/0	0/1	0/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/1	./.	0/1	0/1	0/1	0/1	0/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/1	0/1	0/0	0/1	0/1	1/1	0/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	./.	0/1	./.	./.	0/0	./.	0/0	./.	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	15212918	SNP-3.15211564.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/1	./.	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/1	1/1	1/1	./.	0/0	0/1	0/1	1/1	0/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	1/1	0/0	./.	./.	./.	./.	0/0	./.	0/0	./.	./.	0/1	0/0	0/1	1/1	./.	0/0	0/0	1/1	0/0	./.	./.	0/0	./.	1/1	0/0	0/0	./.	0/0	1/1	0/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1
+3	15214904	SNP-3.15213550.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Gct/Cct|p.Ala637Pro/c.1909T>C|715|LOC_Os03g26630|protein_coding|CODING|LOC_Os03g26630.2|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME),missense_variant(MODERATE|MISSENSE|Gct/Cct|p.Ala637Pro/c.1909T>C|715|LOC_Os03g26630|protein_coding|CODING|LOC_Os03g26630.1|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	./.	0/1	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	0/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0
+3	15215501	SNP-3.15214147.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.1683+94T>C|715|LOC_Os03g26630|protein_coding|CODING|LOC_Os03g26630.1|5|1),intron_variant(MODIFIER|||c.1683+94T>C|715|LOC_Os03g26630|protein_coding|CODING|LOC_Os03g26630.2|5|1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	15215914	SNP-3.15214560.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aAt/aTt|p.Asn485Ile/c.1454G>T|715|LOC_Os03g26630|protein_coding|CODING|LOC_Os03g26630.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME),missense_variant(MODERATE|MISSENSE|aAt/aTt|p.Asn485Ile/c.1454G>T|715|LOC_Os03g26630|protein_coding|CODING|LOC_Os03g26630.2|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15216651	SNP-3.15215297.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.1333+184G>T|715|LOC_Os03g26630|protein_coding|CODING|LOC_Os03g26630.1|3|1),intron_variant(MODIFIER|||c.1333+184G>T|715|LOC_Os03g26630|protein_coding|CODING|LOC_Os03g26630.2|3|1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15219769	SNP-3.15218415.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15222669	SNP-3.15221315.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	15222691	SNP-3.15221337.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	./.	0/1	0/1	0/0	1/1	0/0	./.	0/0	0/1	0/1	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	1/1	./.	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15223329	SNP-3.15221975.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	15224013	SNP-3.15222659.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	./.	./.	./.	./.	./.	1/1	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	1/1	1/1	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	15224158	SNP-3.15222804.	A	G	.	.	PR;EFF=5_prime_UTR_variant(MODIFIER||505|c.-505A>G|157|LOC_Os03g26650|protein_coding|CODING|LOC_Os03g26650.2|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	./.	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	15224552	SNP-3.15223198.	C	A	.	.	PR;EFF=5_prime_UTR_variant(MODIFIER||111|c.-111C>A|157|LOC_Os03g26650|protein_coding|CODING|LOC_Os03g26650.2|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),intron_variant(MODIFIER|||c.-54-57C>A|157|LOC_Os03g26650|protein_coding|CODING|LOC_Os03g26650.1|1|1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15224739	SNP-3.15223385.	A	G	.	.	PR;EFF=synonymous_variant(LOW||aGg/aGg|p.Arg26Arg/c.77A>G|157|LOC_Os03g26650|protein_coding|CODING|LOC_Os03g26650.2|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW||aGg/aGg|p.Arg26Arg/c.77A>G|157|LOC_Os03g26650|protein_coding|CODING|LOC_Os03g26650.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	15225273	SNP-3.15223919.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Ctc/Gtc|p.Leu156Val/c.466A>G|157|LOC_Os03g26650|protein_coding|CODING|LOC_Os03g26650.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME),missense_variant(MODERATE|MISSENSE|Ctc/Gtc|p.Leu156Val/c.466A>G|157|LOC_Os03g26650|protein_coding|CODING|LOC_Os03g26650.2|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	./.	./.	./.	./.	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	./.	1/1	0/0	./.	./.	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	./.	1/1	1/1	./.	./.	0/0	1/1	0/0	./.	0/0	./.	./.	1/1	0/0	./.	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	./.	1/1	./.	0/0	1/1
+3	15225820	SNP-3.15224466.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	./.	./.	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0	./.	0/0	1/1	./.	1/1	./.	./.	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	1/1	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1
+3	15226647	SNP-3.15225293.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	0/0	1/1	1/1	1/1	./.	0/0	./.	1/1	1/1	./.	./.	./.	./.	./.	./.	1/1	1/1	0/0	1/1	1/1	./.	0/0	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	0/0	./.
+3	15233433	SNP-3.15232079.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	./.	0/1	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/1	0/0	0/0	./.	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	0/0	./.	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	0/0	0/0	./.	0/0	0/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/1	./.	./.	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	./.	0/1
+3	15233559	SNP-3.15232205.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	0/1	0/1	0/1	0/0	0/0	0/0	./.	./.	0/0	0/1	./.	./.	./.	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/1	0/1	0/1	0/1	0/0	0/0	0/0	0/1	0/0	./.	1/1	1/1	./.	./.	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/1	0/0	0/1	./.	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/1	./.	1/1	0/0	0/0	./.	0/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/1	./.	0/0	0/0	./.	0/0	./.	0/1	0/0	./.	0/0	0/0	1/1	0/0	0/1	./.	./.	./.	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	./.	0/0	0/0	./.	./.	./.	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	./.	0/0	1/1
+3	15234063	SNP-3.15232709.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	1/1	1/1	1/1	./.	0/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	0/1	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	0/0	./.	1/1	0/0	0/0	./.	1/1	0/0	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	./.	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15235833	SNP-3.15234479.	A	G	.	.	PR;EFF=synonymous_variant(LOW||Ctt/Ctt|p.Leu80Leu/c.238T>C|158|LOC_Os03g26680|protein_coding|CODING|LOC_Os03g26680.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/1	./.	0/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	./.	0/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	15239794	SNP-3.15238440.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.957-297A>G|817|LOC_Os03g26690|protein_coding|CODING|LOC_Os03g26690.1|2|1)	GT	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	./.	1/1	./.	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	./.	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	./.	./.	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0
+3	15241687	SNP-3.15240333.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|aaG/aaA|p.Lys536Lys/c.1608C>A|817|LOC_Os03g26690|protein_coding|CODING|LOC_Os03g26690.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	./.	./.	0/1	0/0	./.	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	./.	1/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	./.	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0
+3	15254129	SNP-3.15252775.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	./.	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	./.	1/1	0/0	./.	1/1	./.	1/1	0/0	1/1	./.	./.	0/0	1/1	1/1	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	./.	1/1	0/0	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	./.	1/1	./.	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0
+3	15254265	SNP-3.15252911.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	./.	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	./.	./.	1/1	./.	1/1	0/0	1/1	./.	./.	0/0	1/1	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15290587	SNP-3.15289233.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	./.	1/1	0/0	0/0	./.	./.	0/0	1/1	./.	./.	./.	0/0	1/1	./.	./.	./.	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	1/1	./.	0/0	1/1	0/0	1/1	./.	1/1	0/0	./.	./.	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	./.	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1
+3	15290918	SNP-3.15289564.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	1/1	./.	./.	1/1	0/0	./.	./.	./.	0/0	./.	1/1	1/1	1/1	./.	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	1/1	0/0	1/1	0/0	./.	1/1	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15291376	SNP-3.15290022.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aaG/aaC|p.Lys417Asn/c.1251T>C|421|LOC_Os03g26784|protein_coding|CODING|LOC_Os03g26784.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	15292524	SNP-3.15291170.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gAt/gCt|p.Asp118Ala/c.353T>C|421|LOC_Os03g26784|protein_coding|CODING|LOC_Os03g26784.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/1	0/1	./.	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	./.	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/1	0/0	1/1	0/0	0/1	0/1	1/1	0/1	0/0	0/0	1/1	0/0	0/1	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/1	1/1	0/0	1/1	1/1	0/0	0/1	0/1	0/1	1/1	0/1	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/1	0/0	0/1	1/1	0/0	1/1	1/1	0/1	0/0	0/1	1/1	0/0	./.	0/1	0/1	1/1	1/1	0/1	0/0	./.	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1
+3	15292560	SNP-3.15291206.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cGt/cCt|p.Arg106Pro/c.317T>C|421|LOC_Os03g26784|protein_coding|CODING|LOC_Os03g26784.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/0	1/1
+3	15292626	SNP-3.15291272.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cAa/cCa|p.Gln84Pro/c.251T>C|421|LOC_Os03g26784|protein_coding|CODING|LOC_Os03g26784.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	15293334	SNP-3.15291980.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.143-600T>C|421|LOC_Os03g26784|protein_coding|CODING|LOC_Os03g26784.1|1|1)	GT	1/1	0/0	0/1	0/0	0/1	./.	0/0	0/0	0/1	0/0	./.	0/1	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/1	./.	0/1	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	0/1	0/0	1/1	0/0	1/1	0/1	1/1	0/0	0/1	./.	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1
+3	15293985	SNP-3.15292631.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.142+129T>C|421|LOC_Os03g26784|protein_coding|CODING|LOC_Os03g26784.1|1|1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/1	1/1	1/1	0/1	1/1	./.	0/0	1/1	./.	1/1	./.	0/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/1	0/1	0/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	1/1	1/1	./.	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	./.	./.	./.	./.	./.	./.	0/0	./.	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/1	0/1	1/1	0/0	1/1
+3	15294598	SNP-3.15293244.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/1	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1
+3	15294874	SNP-3.15293520.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	1/1	0/1	1/1	0/0	./.	./.	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	./.	0/0	0/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	./.	1/1	0/0	./.	0/1	./.	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/1	1/1	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1
+3	15301525	SNP-3.15300171.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	./.	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	./.	1/1	./.	0/0	1/1	0/0	./.	0/0	0/0	1/1	./.	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	1/1	0/0	1/1	1/1	./.	0/0	1/1	./.	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	./.	./.	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15304027	SNP-3.15302673.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Aag/Gag|p.Lys68Glu/c.202A>G|235|LOC_Os03g26810|protein_coding|CODING|LOC_Os03g26810.1|2|1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0	./.	0/0	./.	./.	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	./.	./.	1/1	0/0	./.	1/1	1/1	0/0	./.	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	./.
+3	15309510	SNP-3.15308156.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Ttt/Gtt|p.Phe176Val/c.526A>G|178|LOC_Os03g26820|protein_coding|CODING|LOC_Os03g26820.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/1	0/1	0/1	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/1	1/1	1/1	0/1	0/0	1/1	0/0	0/1	./.	1/1	0/0	0/1	0/1	1/1	0/1	0/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/1	./.	0/1	./.	0/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	./.	1/1
+3	15309552	SNP-3.15308198.	A	G	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||31|c.*31A>G|178|LOC_Os03g26820|protein_coding|CODING|LOC_Os03g26820.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	./.	1/1	0/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/0	1/1
+3	15315887	SNP-3.15314533.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15316277	SNP-3.15314923.	C	A	.	.	PR;EFF=synonymous_variant(LOW||tTg/tTg|p.Leu86Leu/c.257G>T|187|LOC_Os03g26840|protein_coding|CODING|LOC_Os03g26840.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	./.	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	./.	1/1	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	15316494	SNP-3.15315140.	A	G	.	.	PR;EFF=synonymous_variant(LOW||Ctg/Ctg|p.Leu14Leu/c.40T>C|187|LOC_Os03g26840|protein_coding|CODING|LOC_Os03g26840.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	15318459	SNP-3.15317105.	A	G	.	.	PR;EFF=splice_acceptor_variant(HIGH|||c.151A>G|97|LOC_Os03g26850|protein_coding|CODING|LOC_Os03g26850.1|2|1),intron_variant(MODIFIER|||c.151-1A>G|97|LOC_Os03g26850|protein_coding|CODING|LOC_Os03g26850.1|1|1);LOF=(LOC_Os03g26850|LOC_Os03g26850|1|1.00)	GT	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	./.	./.	1/1	0/0	./.	1/1	1/1	./.	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	./.	./.	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0
+3	15319991	SNP-3.15318637.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	15320714	SNP-3.15319360.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	./.	./.	0/0	./.	1/1	0/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/1	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/1	0/0	1/1	./.	0/1	./.	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/1	1/1	./.	./.	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	0/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0
+3	15321314	SNP-3.15319960.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	./.	0/0	1/1	./.	0/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/1	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/1	0/0	./.	0/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	./.	0/1
+3	15321781	SNP-3.15320427.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	15323105	SNP-3.15321751.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ctA/ctT|p.Leu153Leu/c.459G>T|332|LOC_Os03g26860|protein_coding|CODING|LOC_Os03g26860.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	0/0	./.	0/0	0/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	./.	0/0	0/0	./.	0/0	./.	0/0
+3	15323126	SNP-3.15321772.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|caA/caT|p.Gln146His/c.438G>T|332|LOC_Os03g26860|protein_coding|CODING|LOC_Os03g26860.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	./.	1/1	./.	./.	./.	./.	./.	./.	0/0	1/1	./.	./.	./.	1/1	./.	./.	1/1	./.	./.	./.	1/1	./.	./.	./.	./.	0/0	1/1	./.	./.	./.	./.	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	./.	0/0	./.	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	./.	1/1	0/0	1/1	./.	./.	0/0	1/1	./.	./.	0/0	./.	./.	0/0	./.	1/1	./.	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	./.	./.	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	0/0	./.	./.	0/0	./.	./.	./.	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0
+3	15323380	SNP-3.15322026.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.367-183T>C|332|LOC_Os03g26860|protein_coding|CODING|LOC_Os03g26860.1|1|1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/1	0/1	1/1	0/1	0/1	0/0	1/1	./.	1/1	0/1	0/1	1/1	1/1	./.	0/1	1/1	./.	0/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/1	0/1	1/1	0/0	1/1	1/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/1	1/1	0/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	1/1	0/1	./.	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0
+3	15326858	SNP-3.15325504.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1
+3	15326925	SNP-3.15325571.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	0/1	0/1	./.	1/1	0/1	0/1	0/1	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	0/1	./.	0/0	1/1	0/1	0/1	0/1	0/0	0/1	./.	0/1	./.	1/1	1/1	0/1	1/1	0/1	./.	0/1	0/0	0/0	0/1	./.	0/0	./.	0/1	1/1	0/0	0/1	0/1	./.	0/0	0/1	1/1	0/0	0/0	0/1	1/1	1/1	0/0	./.	0/1	0/0	0/1	1/1	./.	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	./.	1/1	0/1	0/0	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	./.	0/0	0/0	./.	0/1	0/1	0/0	1/1	1/1	./.	0/1	0/0	0/0	1/1	./.	0/1	./.	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/1	0/1	0/0	0/0	0/0	0/0	0/1	0/0
+3	15327621	SNP-3.15326267.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/1	1/1	0/0	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/1	0/0	1/1	0/0
+3	15327657	SNP-3.15326303.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	./.	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/1	./.	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	15327752	SNP-3.15326398.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	0/0	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.	./.	1/1	0/0	1/1	0/0	0/0	./.	1/1	0/0	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	15328210	SNP-3.15326856.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	./.	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	15329206	SNP-3.15327852.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/1	./.	0/1	0/1	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	0/0	1/1	0/0	./.	0/0	0/1	0/0	0/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	./.	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	./.	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1
+3	15329912	SNP-3.15328558.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.-116-20A>G|402|LOC_Os03g26870|protein_coding|CODING|LOC_Os03g26870.1|1|1),intron_variant(MODIFIER|||c.-1641-20A>G|328|LOC_Os03g26870|protein_coding|CODING|LOC_Os03g26870.2|1|1)	GT	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	1/1	0/0	./.	1/1	./.	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	./.	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	0/0	./.
+3	15331834	SNP-3.15330480.	A	G	.	.	PR;EFF=5_prime_UTR_variant(MODIFIER||1077|c.-1077A>G|328|LOC_Os03g26870|protein_coding|CODING|LOC_Os03g26870.2|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME),intron_variant(MODIFIER|||c.252+197A>G|402|LOC_Os03g26870|protein_coding|CODING|LOC_Os03g26870.1|4|1)	GT	./.	0/0	0/0	./.	./.	0/0	0/0	0/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	./.	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	./.
+3	15332489	SNP-3.15331135.	C	A	.	.	PR;EFF=5_prime_UTR_variant(MODIFIER||422|c.-422C>A|328|LOC_Os03g26870|protein_coding|CODING|LOC_Os03g26870.2|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME),intron_variant(MODIFIER|||c.253-452C>A|402|LOC_Os03g26870|protein_coding|CODING|LOC_Os03g26870.1|4|1)	GT	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	0/1	0/0	0/1	./.	0/0	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15333239	SNP-3.15331885.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|gcC/gcG|p.Ala154Ala/c.462A>G|402|LOC_Os03g26870|protein_coding|CODING|LOC_Os03g26870.1|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW|SILENT|gcC/gcG|p.Ala80Ala/c.240A>G|328|LOC_Os03g26870|protein_coding|CODING|LOC_Os03g26870.2|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	./.	1/1	./.	0/0	0/0	0/0	./.	./.	./.	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	./.	./.	./.	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	1/1	./.	0/0	./.	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	1/1	./.	./.	1/1	./.	1/1
+3	15333774	SNP-3.15332420.	A	G	.	.	PR;EFF=synonymous_variant(LOW||ctG/ctG|p.Leu240Leu/c.720A>G|402|LOC_Os03g26870|protein_coding|CODING|LOC_Os03g26870.1|9|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW||ctG/ctG|p.Leu166Leu/c.498A>G|328|LOC_Os03g26870|protein_coding|CODING|LOC_Os03g26870.2|8|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/1	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/1	0/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0
+3	15333798	SNP-3.15332444.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|tcC/tcA|p.Ser248Ser/c.744C>A|402|LOC_Os03g26870|protein_coding|CODING|LOC_Os03g26870.1|9|1),synonymous_variant(LOW|SILENT|tcC/tcA|p.Ser174Ser/c.522C>A|328|LOC_Os03g26870|protein_coding|CODING|LOC_Os03g26870.2|8|1)	GT	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	./.	0/0	0/0	./.	1/1	./.	0/0	./.	./.	1/1	./.	./.	./.	./.	./.	1/1	1/1	./.	./.	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	./.	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	./.	1/1	0/0	1/1	./.	./.	0/0	1/1	./.	1/1	0/0	1/1	./.	0/0	0/0	./.	1/1	1/1	0/0	./.	1/1	0/0	./.	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	0/1	0/0	0/0	./.	./.	0/0	1/1	./.	./.	0/0	0/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	15333950	SNP-3.15332596.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Aag/Gag|p.Lys265Glu/c.793A>G|402|LOC_Os03g26870|protein_coding|CODING|LOC_Os03g26870.1|10|1),missense_variant(MODERATE|MISSENSE|Aag/Gag|p.Lys191Glu/c.571A>G|328|LOC_Os03g26870|protein_coding|CODING|LOC_Os03g26870.2|9|1)	GT	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	./.	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	./.	0/1	./.	./.	0/0	./.	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	./.	./.	0/0	0/0	0/0	0/0
+3	15335806	SNP-3.15334452.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	./.	./.	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	./.	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	1/1	1/1	./.	./.	1/1	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	./.	1/1	./.	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0
+3	15335891	SNP-3.15334537.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/1	./.	0/0	0/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	./.	./.	0/1	0/0	0/0	0/0	0/1	1/1	0/0	0/1	0/0	./.	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/1	1/1	0/1	0/0	./.	0/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0
+3	15336159	SNP-3.15334805.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/1	0/1	1/1	0/0	0/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/1	0/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	1/1	./.	0/0	0/0	0/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1
+3	15336618	SNP-3.15335264.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	15336996	SNP-3.15335642.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/1	0/1	./.	0/1	0/1	1/1	1/1	./.	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	./.	./.	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	1/1
+3	15337287	SNP-3.15335933.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	1/1	./.	./.	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	./.	1/1	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	0/0	./.	0/0	./.	0/0	./.	0/0	./.	./.	1/1	./.	./.	1/1	1/1	0/0	0/0	0/0	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	./.	1/1	1/1	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	1/1	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	./.	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1
+3	15340437	SNP-3.15339083.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	./.	0/0	0/1	0/0	0/1	0/0	0/0	./.	./.	./.	./.	0/1	0/1	0/0	0/0	0/1	0/1	1/1	./.	0/1	0/1	./.	0/1	0/1	1/1	1/1	0/1	1/1	1/1	0/1	0/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/1	./.	1/1	0/1	./.	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/1	0/1	1/1	0/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/1	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0
+3	15341253	SNP-3.15339899.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	./.	1/1	./.	0/0	1/1	./.	1/1	1/1	./.	./.	1/1	./.	0/1	1/1	./.	./.	1/1	1/1	1/1	0/0	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/0	1/1	./.	0/0	./.	./.	0/0	0/0	./.	0/0	1/1	0/0	0/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0
+3	15341900	SNP-3.15340546.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	0/0	./.	./.	0/0	1/1	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	./.	0/0	1/1	0/0	./.	0/0	1/1	0/0	./.	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	./.	./.	1/1	1/1	./.	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	0/0	1/1
+3	15343206	SNP-3.15341852.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/1	0/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	0/1	0/0	0/0	0/1	0/0	1/1	0/0	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1
+3	15346607	SNP-3.15345253.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	1/1	./.	./.	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	./.	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	./.	0/0	./.	1/1	./.	./.	./.	./.	0/0	./.	0/0	1/1	0/0	./.	./.	./.	./.	./.	0/0	./.	./.	0/0	./.	./.	0/0	1/1	0/0	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	15347942	SNP-3.15346588.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	0/0	0/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0
+3	15348159	SNP-3.15346805.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.52-40A>G|800|LOC_Os03g26880|protein_coding|CODING|LOC_Os03g26880.1|1|1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	15349886	SNP-3.15348532.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|caC/caA|p.His445Gln/c.1335C>A|800|LOC_Os03g26880|protein_coding|CODING|LOC_Os03g26880.1|4|1)	GT	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	1/1	0/0	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/1	0/0	1/1	0/0
+3	15351072	SNP-3.15349718.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|tcT/tcA|p.Ser757Ser/c.2271C>A|800|LOC_Os03g26880|protein_coding|CODING|LOC_Os03g26880.1|7|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/1	1/1	./.	0/0	./.	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/1	./.	0/0	1/1	0/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/1	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0
+3	15352213	SNP-3.15350859.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|ttG/ttC|p.Leu1190Phe/c.3570T>C|1372|LOC_Os03g26890|protein_coding|CODING|LOC_Os03g26890.1|8|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	./.	0/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1
+3	15353046	SNP-3.15351692.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.2885-52G>T|1372|LOC_Os03g26890|protein_coding|CODING|LOC_Os03g26890.1|5|1)	GT	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	./.	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	./.	./.	0/1	0/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/1	0/0
+3	15355248	SNP-3.15353894.	A	G	.	.	PR;EFF=synonymous_variant(LOW||aCt/aCt|p.Thr508Thr/c.1523T>C|1372|LOC_Os03g26890|protein_coding|CODING|LOC_Os03g26890.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0
+3	15355846	SNP-3.15354492.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|Agg/Cgg|p.Arg340Arg/c.1018T>C|1372|LOC_Os03g26890|protein_coding|CODING|LOC_Os03g26890.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	./.	0/0	./.	1/1	0/0	./.	0/0	0/1	./.	1/1	./.	1/1	1/1	0/0	./.	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	0/1	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	1/1	./.	1/1	./.	1/1	./.	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	1/1	./.	./.	1/1	./.	0/0	1/1	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0
+3	15357818	SNP-3.15356464.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.458-173G>T|321|LOC_Os03g26900|protein_coding|CODING|LOC_Os03g26900.1|2|1)	GT	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	./.	./.	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/1	1/1	0/0	1/1	0/1	./.	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/1	0/1	0/0	0/0	0/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	./.	0/0	./.	0/0	0/0	1/1	0/0
+3	15358532	SNP-3.15357178.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|caG/caC|p.Gln22His/c.66T>C|321|LOC_Os03g26900|protein_coding|CODING|LOC_Os03g26900.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	./.	./.	./.	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	0/1	1/1	0/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	1/1	./.	0/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	./.	./.	0/1	./.	./.	1/1	./.	0/0	0/0	./.	0/0	1/1	1/1	0/1	./.	./.	1/1	1/1	./.	./.	./.	0/1	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	./.	./.	0/0	0/1	0/0	0/0
+3	15361028	SNP-3.15359674.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/1	0/1	0/1	0/0	0/0	0/1	0/1	0/1	1/1	0/0	0/0	1/1	1/1	0/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	./.	1/1	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/1	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/1	1/1	1/1	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0
+3	15361971	SNP-3.15360617.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/1	0/0	0/0	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15363498	SNP-3.15362144.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	1/1	0/1	0/0	0/0	1/1	0/1	./.	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/1	1/1	./.	./.	1/1	1/1	0/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/1	./.	0/0	0/0	0/1	./.	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15366115	SNP-3.15364761.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0
+3	15366187	SNP-3.15364833.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	1/1	1/1	./.	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	0/0	1/1
+3	15367078	SNP-3.15365724.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	./.	./.	./.	./.	./.	0/1	0/1	./.	0/1	0/0	0/0	./.	./.	1/1	1/1	./.	./.	0/1	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	./.	1/1	0/0	1/1	./.	1/1	0/0	1/1	./.	0/0	0/0	1/1	0/1	1/1	0/0	1/1	./.	0/0	0/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/1	0/1	0/0	0/1	0/0	1/1	0/0	1/1	0/1	0/1	./.	./.	0/0	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	1/1	1/1	1/1	./.	0/1	0/1	1/1	./.	1/1	./.	0/0	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/1	0/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	./.	./.	0/1	./.	./.	0/1	1/1	0/1	./.	0/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	15368555	SNP-3.15367201.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	0/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15369388	SNP-3.15368034.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	15369587	SNP-3.15368233.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	./.	./.	0/0	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	./.	0/0	1/1	0/0	1/1	./.	./.	./.	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	./.	./.	0/0	./.	0/0	./.	1/1	0/0	./.	0/0	0/0	./.	./.	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	./.	./.	./.	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15369786	SNP-3.15368432.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/1	1/1	0/1	0/1	1/1	1/1	1/1	0/1	0/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/1	0/1	1/1	0/1	0/0	./.	1/1	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	1/1	0/1	0/1	0/0	0/0	1/1	0/0	1/1	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0
+3	15370592	SNP-3.15369238.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	./.	./.	1/1	0/0	./.	./.	0/0	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	./.	./.	1/1	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	./.	./.	./.	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	0/0	1/1	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	./.	./.	0/0	0/0	1/1	0/0	./.	./.	./.	./.	1/1	./.	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	./.	./.	./.	0/0	0/0	1/1	./.	0/0	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	./.	0/0
+3	15370686	SNP-3.15369332.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1
+3	15370768	SNP-3.15369414.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/1	0/0	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	1/1	1/1	./.	./.	./.	1/1	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/1	./.	./.	0/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	15371351	SNP-3.15369997.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	./.	1/1	./.	./.	./.	0/0	./.	1/1	0/0	1/1	./.	./.	1/1	0/0	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/1	1/1	./.	./.	0/1	0/1	0/1	0/1	0/0	./.	0/0	0/0	0/1	./.	1/1	0/0	./.	./.	0/1	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	15372006	SNP-3.15370652.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15373779	SNP-3.15372425.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	15377035	SNP-3.15375681.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	./.	1/1	1/1	0/0	./.	1/1	1/1	0/0	./.	0/1	./.	0/1	./.	1/1	0/0	./.	1/1	0/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/1	./.	1/1	1/1	1/1	1/1	0/0	./.	./.	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	./.	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/1	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1
+3	15378020	SNP-3.15376666.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/1	0/0
+3	15379589	SNP-3.15378235.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/1	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15379816	SNP-3.15378462.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15379991	SNP-3.15378637.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	./.	0/1	0/1	0/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/1	0/1	0/1	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/1	0/0	0/0	0/1	0/0
+3	15382697	SNP-3.15381343.	C	A	.	.	PR;EFF=synonymous_variant(LOW||ccA/ccA|p.Pro148Pro/c.444C>A|374|LOC_Os03g26910|protein_coding|CODING|LOC_Os03g26910.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	./.	./.	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	./.	./.	0/0	./.	1/1	./.	1/1	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	./.	./.	./.	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	./.	0/0	0/0	1/1	0/0	1/1	./.	./.	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0
+3	15384795	SNP-3.15383441.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0
+3	15386720	SNP-3.15385366.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/1	1/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0
+3	15387032	SNP-3.15385678.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	0/1	1/1	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	./.	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0
+3	15388007	SNP-3.15386653.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	1/1	0/0	./.	0/1	0/0	0/1	0/1	1/1	0/0	0/0	0/0	0/0	0/1	0/1	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/1	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	1/1	0/0	0/1	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0
+3	15388697	SNP-3.15387343.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0
+3	15389271	SNP-3.15387917.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/1	1/1	./.	0/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	0/1	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	./.	./.	0/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0
+3	15389524	SNP-3.15388170.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/1	1/1	1/1	0/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	./.	1/1
+3	15389626	SNP-3.15388272.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	15390114	SNP-3.15388760.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	1/1	0/0	0/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15393029	SNP-3.15391675.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	15395475	SNP-3.15394121.	A	G	.	.	PR;EFF=synonymous_variant(LOW||cGt/cGt|p.Arg50Arg/c.149A>G|503|LOC_Os03g26920|protein_coding|CODING|LOC_Os03g26920.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	15399098	SNP-3.15397744.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/1	0/1	0/0	0/1	1/1	0/0	0/1	0/0	./.	./.	1/1	./.	0/1	./.	./.	1/1	0/1	0/1	0/0	1/1	0/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/1	1/1	./.	0/0	0/0	0/1	0/1	./.	./.	0/1	0/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/1	./.	0/0	0/1	0/1	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/1	0/1	0/0	0/1	./.	0/1	1/1	1/1	0/0	0/1	1/1	0/1	0/1	0/1	0/0	0/0	0/1	0/1	0/0	0/0	0/0	1/1	./.	0/1	./.	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/1	0/1	1/1	0/1	0/1	1/1	0/1	./.	0/0	1/1	0/1	0/1	0/0	1/1	./.	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	0/1	1/1	0/0	0/1	./.	0/0	0/0	./.	0/1	0/0	1/1	0/1	0/1	0/1	0/0	0/1	./.	0/1	0/1	0/0	0/1	1/1	./.	0/1	0/1	1/1	./.	1/1	0/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	1/1	1/1	./.	0/1	0/0	./.	0/1	./.	0/1	0/0
+3	15401934	SNP-3.15400580.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gCc/gGc|p.Ala290Gly/c.869A>G|478|LOC_Os03g26930|protein_coding|CODING|LOC_Os03g26930.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	15402454	SNP-3.15401100.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.1094+201C>A|478|LOC_Os03g26930|protein_coding|CODING|LOC_Os03g26930.1|5|1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15402840	SNP-3.15401486.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ccA/ccG|p.Pro376Pro/c.1128A>G|478|LOC_Os03g26930|protein_coding|CODING|LOC_Os03g26930.1|6|1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	15407650	SNP-3.15406296.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.248-77A>G|181|LOC_Os03g26940|protein_coding|CODING|LOC_Os03g26940.1|2|1)	GT	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0
+3	15407820	SNP-3.15406466.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.298+43A>G|181|LOC_Os03g26940|protein_coding|CODING|LOC_Os03g26940.1|3|1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	15410098	SNP-3.15408744.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	./.	0/1	0/1	0/1	0/0	0/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/1	0/0	./.	0/0	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	./.	0/0	0/0	1/1	0/1	0/0	./.	1/1	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/1	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	./.	1/1	./.	1/1	1/1	./.	./.	0/0	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	./.	0/0	0/0	1/1
+3	15417237	SNP-3.15415883.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gAt/gGt|p.Asp1054Gly/c.3161A>G|1581|LOC_Os03g26960|protein_coding|CODING|LOC_Os03g26960.1|13|1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	./.	./.	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0
+3	15420573	SNP-3.15419219.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.118+84A>G|235|LOC_Os03g26970|protein_coding|CODING|LOC_Os03g26970.1|2|1)	GT	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	./.	0/1	1/1	1/1	./.	./.	1/1	0/0	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	./.	0/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1
+3	15423622	SNP-3.15422268.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gaT/gaG|p.Asp181Glu/c.543A>G|235|LOC_Os03g26970|protein_coding|CODING|LOC_Os03g26970.1|9|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0
+3	15426783	SNP-3.15425429.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1
+3	15428351	SNP-3.15426997.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/1	0/0	1/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/1	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	./.	0/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/1	1/1	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15429024	SNP-3.15427670.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	./.	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15431066	SNP-3.15429712.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0
+3	15432664	SNP-3.15431310.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15433832	SNP-3.15432478.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0
+3	15434604	SNP-3.15433250.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/1	1/1	0/0	1/1	0/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/1	1/1	0/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15437886	SNP-3.15436532.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/1	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	./.	./.	0/0	1/1	0/0	1/1	0/0	0/0	1/1	./.	./.	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	./.	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	./.	0/0	1/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	1/1
+3	15442866	SNP-3.15441512.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	0/1	0/1	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	15443878	SNP-3.15442524.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1
+3	15445331	SNP-3.15443977.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	1/1	./.	0/1	1/1	1/1	1/1	./.	./.	0/1	0/0	0/1	1/1	0/0	./.	1/1	0/0	1/1	0/1	./.	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/1	0/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	./.	1/1	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/1
+3	15446453	SNP-3.15445099.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	15447518	SNP-3.15446164.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1
+3	15449713	SNP-3.15448359.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	./.	./.	0/0	./.	./.	./.	1/1	0/0	0/0	./.	0/1	0/0	1/1	./.	./.	0/0	0/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	./.	./.	./.	0/0	1/1	0/0	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/1	1/1	0/0	0/0	./.	1/1	1/1	0/0	./.	0/0	./.	1/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	./.	0/1	./.	1/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1
+3	15451422	SNP-3.15450068.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	15451733	SNP-3.15450379.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	1/1	1/1	./.	0/0	1/1	0/1	0/0	0/1	0/0	./.	0/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/1	1/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	1/1	0/1	0/0	0/0	0/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	./.	0/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	15452883	SNP-3.15451529.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/1	0/1	0/1	0/1	0/0	./.	0/1	0/1	./.	0/1	0/0	0/1	0/0	0/0	0/1	0/0	0/1	1/1	./.	0/0	0/0	0/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/1	0/0	0/0	1/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/1	0/1	0/1	0/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/0	1/1	0/1	0/0	0/1	1/1	0/1	0/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/1	./.	0/0	0/0	1/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/1	0/1	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/1	1/1	0/0	1/1	0/0	0/0	./.	1/1
+3	15453230	SNP-3.15451876.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	0/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/1	0/1	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	./.	1/1	0/1	0/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1
+3	15454100	SNP-3.15452746.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aTt/aAt|p.Ile13Asn/c.38C>A|75|LOC_Os03g27003|protein_coding|CODING|LOC_Os03g27003.2|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),missense_variant(MODERATE|MISSENSE|aTt/aAt|p.Ile13Asn/c.38C>A|75|LOC_Os03g27003|protein_coding|CODING|LOC_Os03g27003.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15454253	SNP-3.15452899.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aTg/aAg|p.Met64Lys/c.191C>A|75|LOC_Os03g27003|protein_coding|CODING|LOC_Os03g27003.2|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),missense_variant(MODERATE|MISSENSE|aTg/aAg|p.Met64Lys/c.191C>A|75|LOC_Os03g27003|protein_coding|CODING|LOC_Os03g27003.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/1	0/1	0/1	0/1	0/0	0/1	0/1	1/1	0/0	0/1	0/1	0/0	0/0	./.	1/1	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	0/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/1	0/1	./.	0/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/1	0/0	0/0	./.	0/0	0/0	0/1	0/0
+3	15455450	SNP-3.15454096.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.*65-712A>G|75|LOC_Os03g27003|protein_coding|CODING|LOC_Os03g27003.1|2|1),intron_variant(MODIFIER|||c.*65-712A>G|75|LOC_Os03g27003|protein_coding|CODING|LOC_Os03g27003.2|1|1)	GT	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	./.	0/0	0/0	./.	./.	./.	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	./.	0/0	0/0
+3	15456672	SNP-3.15455318.	C	A	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||2382|c.*575C>A|75|LOC_Os03g27003|protein_coding|CODING|LOC_Os03g27003.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15457547	SNP-3.15456193.	A	G	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||3257|c.*1450A>G|75|LOC_Os03g27003|protein_coding|CODING|LOC_Os03g27003.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	0/1	0/0	./.	0/0	0/0	0/1	0/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/1	0/0	1/1	0/0	0/0	1/1	./.	1/1	./.	1/1	1/1	0/1	1/1	0/1	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1
+3	15457947	SNP-3.15456593.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	./.	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	0/0	0/0	0/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/1	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0
+3	15458910	SNP-3.15457556.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15459967	SNP-3.15458613.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	0/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	1/1	1/1	0/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0
+3	15462917	SNP-3.15461563.	A	G	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||182|c.*182A>G|290|LOC_Os03g27010|protein_coding|CODING|LOC_Os03g27010.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	1/1	1/1	0/1	0/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	1/1
+3	15463539	SNP-3.15462185.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	15463651	SNP-3.15462297.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1
+3	15473418	SNP-3.15472064.	C	A	.	.	PR;EFF=synonymous_variant(LOW||Aaa/Aaa|p.Lys567Lys/c.1699C>A|572|LOC_Os03g27019|protein_coding|CODING|LOC_Os03g27019.1|11|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW||Aaa/Aaa|p.Lys567Lys/c.1699C>A|572|LOC_Os03g27019|protein_coding|CODING|LOC_Os03g27019.2|10|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW||Aaa/Aaa|p.Lys566Lys/c.1696C>A|571|LOC_Os03g27019|protein_coding|CODING|LOC_Os03g27019.3|11|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW||Aaa/Aaa|p.Lys543Lys/c.1627C>A|548|LOC_Os03g27019|protein_coding|CODING|LOC_Os03g27019.5|10|1|WARNING_REF_DOES_NOT_MATCH_GENOME),3_prime_UTR_variant(MODIFIER||748|c.*653C>A|505|LOC_Os03g27019|protein_coding|CODING|LOC_Os03g27019.6|10|1|WARNING_REF_DOES_NOT_MATCH_GENOME),3_prime_UTR_variant(MODIFIER||1472|c.*599C>A|364|LOC_Os03g27019|protein_coding|CODING|LOC_Os03g27019.7|11|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	15476947	SNP-3.15475593.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Act/Tct|p.Thr35Ser/c.103G>T|184|LOC_Os03g27030|protein_coding|CODING|LOC_Os03g27030.3|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),intron_variant(MODIFIER|||c.303-137G>T|206|LOC_Os03g27030|protein_coding|CODING|LOC_Os03g27030.1|4|1),intron_variant(MODIFIER|||c.303-137G>T|205|LOC_Os03g27030|protein_coding|CODING|LOC_Os03g27030.2|4|1)	GT	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/1	1/1	./.	0/1	./.	1/1	1/1	1/1	./.	0/1	0/0	1/1	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/1	0/0	0/0	0/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/1	0/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	15482936	SNP-3.15481582.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	./.	1/1	./.	./.	0/0	0/0	./.	0/0	1/1	./.	./.	0/0	0/0	./.	./.	0/0	./.	./.	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	./.	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	./.	1/1	0/0	0/0	0/1	./.	0/0	./.	1/1	1/1	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1
+3	15482992	SNP-3.15481638.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	1/1	0/0	0/1	./.	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/1	0/0	0/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15483577	SNP-3.15482223.	A	G	.	.	PR;EFF=synonymous_variant(LOW||aGt/aGt|p.Ser56Ser/c.167A>G|130|LOC_Os03g27050|protein_coding|CODING|LOC_Os03g27050.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	./.	1/1	./.	./.	./.	0/0	./.	./.	./.	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	15485632	SNP-3.15484278.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	0/1	0/1	0/1	1/1	0/1	0/0	0/1	1/1	0/0	1/1	0/0	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/1	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/1	0/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	./.	0/0	0/0	0/1	0/1	0/0	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1
+3	15486523	SNP-3.15485169.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1
+3	15486613	SNP-3.15485259.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	0/1	0/0	0/1	./.	0/1	0/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15487081	SNP-3.15485727.	A	G	.	.	PR;EFF=synonymous_variant(LOW||atG/atG|p.Met12Met/c.36A>G|140|LOC_Os03g27054|protein_coding|CODING|LOC_Os03g27054.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	1/1	0/0	./.	0/0	./.	0/0	0/0	1/1	./.	0/0	1/1	./.	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	0/0	./.	0/0	1/1	1/1	./.	./.	1/1	./.	0/0	./.	0/0	0/0	1/1	1/1	./.	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	1/1	./.	1/1	1/1	0/0	./.	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	0/0	./.	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	./.	1/1	1/1	./.	./.	0/0	1/1	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0
+3	15487224	SNP-3.15485870.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gTg/gGg|p.Val60Gly/c.179A>G|140|LOC_Os03g27054|protein_coding|CODING|LOC_Os03g27054.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	./.	0/0	./.	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0
+3	15487245	SNP-3.15485891.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cAt/cGt|p.His67Arg/c.200A>G|140|LOC_Os03g27054|protein_coding|CODING|LOC_Os03g27054.1|1|1)	GT	./.	./.	0/1	1/1	./.	0/0	./.	./.	0/1	0/1	1/1	0/0	1/1	1/1	0/0	./.	./.	./.	0/0	1/1	./.	0/0	0/1	./.	0/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	./.	./.	0/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1	./.	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0
+3	15487265	SNP-3.15485911.	C	A	.	.	PR;EFF=splice_donor_variant(HIGH|||c.220C>A|140|LOC_Os03g27054|protein_coding|CODING|LOC_Os03g27054.1|1|1),intron_variant(MODIFIER|||c.219+1C>A|140|LOC_Os03g27054|protein_coding|CODING|LOC_Os03g27054.1|1|1);LOF=(LOC_Os03g27054|LOC_Os03g27054|1|1.00)	GT	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	./.	./.	1/1	1/1	./.	./.	0/0	0/0	./.	1/1	./.	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	./.	./.	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0
+3	15491015	SNP-3.15489661.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	./.	./.	./.	1/1	1/1	./.	./.	0/0	./.	./.	./.	./.	0/1	./.	1/1	./.	0/0	./.	0/1	0/0	1/1	./.	0/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	./.	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	./.	0/0	0/0	0/1	./.	0/1	0/0	./.	./.	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	./.	./.	1/1	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/1	./.	0/0	1/1	0/0
+3	15493570	SNP-3.15492216.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aCa/aAa|p.Thr75Lys/c.224C>A|169|LOC_Os03g27070|protein_coding|CODING|LOC_Os03g27070.1|1|1)	GT	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15493738	SNP-3.15492384.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|gcG/gcA|p.Ala95Ala/c.285C>A|169|LOC_Os03g27070|protein_coding|CODING|LOC_Os03g27070.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0
+3	15494636	SNP-3.15493282.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0
+3	15497892	SNP-3.15496538.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	0/0	./.	./.	0/1	./.	./.	./.	0/0	0/1	./.	0/1	./.	1/1	0/1	0/0	./.	./.	0/1	./.	1/1	1/1	1/1	0/0	1/1	0/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	./.	./.	0/1	./.	0/0	0/0	0/0	0/1	1/1	0/1	0/0	0/0	./.	1/1	0/0	0/1	1/1	0/1	1/1	0/0	0/0	./.	1/1	0/0	0/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0
+3	15505717	SNP-3.15504363.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|gaA/gaG|p.Glu276Glu/c.828A>G|545|LOC_Os03g27080|protein_coding|CODING|LOC_Os03g27080.1|3|1),synonymous_variant(LOW|SILENT|gaA/gaG|p.Glu276Glu/c.828A>G|509|LOC_Os03g27080|protein_coding|CODING|LOC_Os03g27080.2|3|1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1
+3	15507530	SNP-3.15506176.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Tct/Gct|p.Ser542Ala/c.1624A>G|545|LOC_Os03g27080|protein_coding|CODING|LOC_Os03g27080.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME),3_prime_UTR_variant(MODIFIER||563|c.*563A>G|509|LOC_Os03g27080|protein_coding|CODING|LOC_Os03g27080.2|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/1	1/1	0/1	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/1	./.	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	1/1	0/1	1/1	./.	0/1	1/1
+3	15508267	SNP-3.15506913.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0
+3	15511291	SNP-3.15509937.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1
+3	15512315	SNP-3.15510961.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	15514427	SNP-3.15513073.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/1	0/1	1/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1
+3	15516480	SNP-3.15515126.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	1/1	1/1	1/1	./.	0/1	1/1	1/1	./.	0/0	./.	0/0	0/0	0/1	0/1	./.	0/1	0/0	./.	./.	0/1	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	1/1	0/0	./.	0/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	./.	1/1	1/1	0/0	./.	1/1	1/1	./.	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	1/1	0/0
+3	15519829	SNP-3.15518475.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/1	0/0	1/1	0/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1
+3	15523120	SNP-3.15521766.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/1	0/1	0/1	0/1	1/1	1/1	1/1	1/1	0/1	0/1	0/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/1	0/0	./.	./.	0/0	0/1	1/1	0/1	1/1	0/0	1/1	1/1	0/0	./.	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/1	0/0
+3	15523284	SNP-3.15521930.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	./.	./.	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/1	1/1	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/1	./.	0/0	1/1
+3	15524641	SNP-3.15523287.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	1/1	./.	./.	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	0/0	0/0	0/0	./.	1/1	1/1	0/0	./.	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	./.	0/0	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0	./.	0/0	./.	0/0	./.	0/0	./.	0/0	1/1	1/1	./.	0/0	./.	1/1	0/0	./.	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	./.	./.	1/1	0/0	./.	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	./.	./.	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	./.	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	1/1	1/1	1/1	0/0	./.	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	1/1	0/0	./.	1/1	0/0
+3	15529204	SNP-3.15527850.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ctC/ctG|p.Leu256Leu/c.768A>G|338|LOC_Os03g27110|protein_coding|CODING|LOC_Os03g27110.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	./.	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	./.	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/0	1/1
+3	15529402	SNP-3.15528048.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.860+18C>A|338|LOC_Os03g27110|protein_coding|CODING|LOC_Os03g27110.1|3|1)	GT	0/0	1/1	1/1	1/1	./.	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	./.	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	./.	0/0	1/1	1/1	./.	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0
+3	15530319	SNP-3.15528965.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	./.	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	./.	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	15530704	SNP-3.15529350.	A	G	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||258|c.*258T>C|368|LOC_Os03g27120|protein_coding|CODING|LOC_Os03g27120.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	./.	1/1	0/1	./.	0/0	1/1	./.	1/1	1/1	0/1	./.	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/1	./.	./.	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	./.	0/1	./.	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/1	1/1	./.	1/1	./.	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.
+3	15533512	SNP-3.15532158.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	./.	./.	0/0	./.	./.	1/1	./.	0/0	0/0	./.	./.	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	./.	0/1	1/1	1/1	./.	./.	1/1	./.	1/1	./.	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	./.	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	./.	1/1	1/1	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	./.	./.	./.	1/1	0/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	./.	./.	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	15534597	SNP-3.15533243.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/1	0/0	0/0	1/1	0/0	0/0	1/1	./.	./.	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	0/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	./.	./.	1/1	0/0	0/0	./.	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	1/1	./.	0/0	./.	0/1	0/0	0/0	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	./.	0/0	0/0	./.	./.	0/1	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0
+3	15534832	SNP-3.15533478.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	1/1	1/1	0/0	0/0	1/1	0/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0
+3	15535412	SNP-3.15534058.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	./.	0/0	0/1	0/0	0/0	1/1	1/1	./.	1/1	0/1	./.	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.
+3	15550180	SNP-3.15548826.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	0/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/0	./.	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	15550690	SNP-3.15549336.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	1/1	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/1	./.	1/1	0/1	1/1	0/0	1/1	1/1	0/0	0/0	./.	1/1	1/1	0/0	./.	1/1	0/0	1/1	./.	./.	1/1	1/1	0/0	1/1	0/1	0/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	1/1	./.	./.	1/1	./.	0/0
+3	15550878	SNP-3.15549524.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/1	0/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	15551274	SNP-3.15549920.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	1/1	1/1	./.	./.	./.	./.	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	0/0	1/1	./.	./.	./.	0/0	0/0	./.	0/0	./.	0/1	./.	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	./.	./.	./.	1/1	1/1	0/0	0/0	1/1	./.	1/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	./.	1/1	./.	0/0	./.	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	0/1	1/1	1/1	1/1	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	./.	./.	1/1	./.	./.	1/1	1/1	./.	./.	1/1	0/0	1/1	0/0	1/1	1/1	0/1	1/1	1/1	./.	1/1	0/0	1/1	0/1	0/0	1/1	./.	0/0	./.	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1
+3	15553792	SNP-3.15552438.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	./.	1/1	0/1	0/1	1/1	./.	0/0	1/1	1/1	0/1	1/1	1/1	0/1	0/0	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	1/1	./.	0/1	1/1	0/1	0/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0
+3	15554798	SNP-3.15553444.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	0/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	1/1	./.	0/1	1/1	0/0	1/1	1/1	0/0	./.	1/1	./.	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	./.	1/1	1/1	0/0
+3	15558056	SNP-3.15556702.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	0/0	0/0	1/1	./.	./.	./.	./.	./.	./.	0/0	1/1	./.	1/1	0/0	0/0	./.	1/1	./.	0/0	0/0	./.	./.	1/1	0/0	./.	0/0	0/0	./.	1/1	0/0	1/1	./.	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	1/1	./.	./.	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	./.	./.	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	./.	1/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	1/1	./.	0/0
+3	15558608	SNP-3.15557254.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	1/1	0/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	./.	0/1	./.	0/1	0/0	1/1	0/0	0/1	./.	0/0	0/0	1/1	./.	0/0	1/1	0/1	./.	1/1	./.	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	1/1	1/1	0/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/1	./.	1/1	./.	./.	./.	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/1	./.	0/1	1/1	1/1	./.	0/0	0/1	0/0	0/0	1/1	./.	./.	0/0	1/1	1/1	1/1	0/0	./.	1/1	0/0	./.	0/1	0/1	0/1	./.	1/1	0/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/1	0/1	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/1	1/1
+3	15560579	SNP-3.15559225.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cCg/cGg|p.Pro31Arg/c.92A>G|91|LOC_Os03g27160|protein_coding|CODING|LOC_Os03g27160.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	./.	./.	./.	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	1/1
+3	15562827	SNP-3.15561473.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	./.	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	./.	./.	0/0	0/0	1/1	1/1	./.	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0
+3	15566406	SNP-3.15565052.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/1	1/1	./.	1/1	1/1	1/1	./.	./.	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/1	0/0	0/1	0/0	0/0	0/0	./.	0/0	./.	./.	1/1	1/1	0/0	0/0	0/0	0/1	0/1	1/1	1/1	1/1	./.	./.	./.	0/1	1/1	1/1	./.	./.	0/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	./.	0/1	0/1	0/0	0/0	0/0	./.	./.	0/1	./.	1/1	1/1	0/1	0/0	0/1	0/0	1/1	0/1	0/0	0/0	./.	./.	./.	0/0	1/1	1/1	0/0	0/1	./.	0/1	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/1	./.	./.	0/0
+3	15567183	SNP-3.15565829.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/1	1/1	0/1	./.	1/1	1/1	0/1	0/0	0/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/1	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/1	1/1	1/1	./.	1/1	0/1	./.	1/1	1/1	1/1	./.	0/1	0/0	./.	./.	0/1	0/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	1/1	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	0/0	1/1	1/1	0/0	0/1	0/1	./.	./.	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/1	0/0	./.	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	1/1	0/1	0/0
+3	15568341	SNP-3.15566987.	C	A	.	.	PR;EFF=stop_gained(HIGH|NONSENSE|Aag/Tag|p.Lys291*/c.871G>T|302|LOC_Os03g27190|protein_coding|CODING|LOC_Os03g27190.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	./.	1/1	1/1	1/1	./.	./.	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/1	0/1	0/1	1/1	1/1	1/1	1/1	0/1	0/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/1	0/0	./.	0/1	0/0	0/0	1/1	1/1	1/1	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	1/1	1/1	0/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/1	1/1	0/0
+3	15574292	SNP-3.15572938.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	./.	./.	./.	./.	1/1	./.	./.	1/1	1/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	./.	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	1/1	0/0	0/0	./.	1/1	./.	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0
+3	15575719	SNP-3.15574365.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/1	0/1	./.	1/1	1/1	1/1	1/1	0/1	./.	./.	0/0	0/1	1/1	0/0	1/1	0/0	0/0	1/1	./.	./.	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/1	./.	0/1	0/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	0/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	./.	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	15576415	SNP-3.15575061.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0
+3	15576739	SNP-3.15575385.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	./.	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/1	1/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/1	./.	0/0	1/1	1/1	0/0	./.	1/1	0/0	0/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	./.	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	./.	1/1	0/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	./.	0/1	./.	0/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/0	./.	1/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1
+3	15577351	SNP-3.15575997.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/1	./.	1/1	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	15577952	SNP-3.15576598.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	15578355	SNP-3.15577001.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/1	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	./.	0/0	./.	0/1	./.	./.	1/1	1/1	1/1	1/1	1/1	0/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/1	./.	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/1	0/0	1/1	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	./.	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	./.	0/0	0/0
+3	15578684	SNP-3.15577330.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/1	0/1	./.	1/1	1/1	./.	0/1	0/1	1/1	0/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/1	0/1	0/0	0/0	1/1	1/1	./.	0/0	0/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/1	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0
+3	15579534	SNP-3.15578180.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/1	./.	./.	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/1	0/0	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	./.	0/0	0/1	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1
+3	15586161	SNP-3.15584807.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|acG/acC|p.Thr228Thr/c.684T>C|369|LOC_Os03g27210|protein_coding|CODING|LOC_Os03g27210.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	./.	1/1	0/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	./.	0/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	./.	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	./.	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/1	0/0	1/1	0/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	./.	./.	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/1	0/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	1/1	./.	1/1	0/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1
+3	15587687	SNP-3.15586333.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	./.	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	./.	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	./.	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	./.	./.	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	15588394	SNP-3.15587040.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	1/1	./.	./.	0/1	0/0	0/0	./.	./.	0/0	1/1	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/1	0/1	./.	./.	0/1	./.	1/1	1/1	0/1	1/1	1/1	0/1	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	./.	0/0	1/1	1/1	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	1/1	./.	0/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	1/1	./.	1/1	0/0	1/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0
+3	15589168	SNP-3.15587814.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	./.	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	./.	1/1	0/0	./.	./.	0/0	1/1	./.	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	1/1	0/0	./.	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	./.	./.	./.	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	./.	1/1	0/0	./.	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	./.	0/0	0/0	./.	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	./.
+3	15591769	SNP-3.15590415.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	./.	./.	0/0	0/0	0/1	0/0	0/0	1/1	./.	./.	0/1	./.	0/0	0/0	./.	0/0	./.	0/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	1/1	0/0	1/1	0/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	./.	0/0	1/1	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	1/1	0/0	1/1	0/0	0/1	0/0	./.	1/1	0/1	1/1	0/0	1/1	0/1	0/0	1/1	./.	0/1	1/1	./.	0/0	./.	1/1	0/0	0/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	1/1
+3	15592964	SNP-3.15591610.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	./.	1/1	1/1	0/0	0/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/1	./.	./.	./.	0/0	1/1	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	./.	0/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	./.	1/1	./.	0/0	0/0	0/1	0/1	./.	0/0	0/0	0/0	0/1	./.	./.	./.	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	./.	./.	1/1	0/0	./.	0/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	./.	./.	0/0
+3	15593033	SNP-3.15591679.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	1/1	0/0	0/0	./.	./.	./.	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	0/1	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	./.	0/0	1/1	1/1	1/1	0/1	1/1	0/1	1/1	0/0	1/1	0/1	./.	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	0/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/1	0/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	./.	./.	./.	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	0/0	0/0	0/0	./.	./.	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	./.	./.	./.	1/1	1/1	1/1	0/0	1/1
+3	15593083	SNP-3.15591729.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	./.	./.	1/1	./.	./.	1/1	0/0	0/0	1/1	1/1	1/1	./.	./.	./.	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	1/1	./.	./.	0/0	./.	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	./.	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	./.	1/1	0/0	./.	1/1	./.	./.	1/1	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0
+3	15593983	SNP-3.15592629.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	1/1	0/1	1/1	1/1	1/1	1/1	0/1	0/1	0/0	0/1	0/1	0/1	0/1	1/1	./.	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/1	0/1	1/1	0/0	./.	./.	1/1	0/0	0/1	0/1	0/0	0/0	1/1	1/1	1/1	0/0	0/1	1/1	0/0	./.	1/1	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	1/1	0/0
+3	15596333	SNP-3.15594979.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1
+3	15597089	SNP-3.15595735.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0
+3	15599575	SNP-3.15598221.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1
+3	15600047	SNP-3.15598693.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1
+3	15600414	SNP-3.15599060.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0
+3	15601856	SNP-3.15600502.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0
+3	15602755	SNP-3.15601401.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0
+3	15604306	SNP-3.15602952.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aAg/aGg|p.Lys122Arg/c.365A>G|555|LOC_Os03g27230|protein_coding|CODING|LOC_Os03g27230.1|1|1)	GT	1/1	0/0	1/1	1/1	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	./.	1/1	0/0	1/1	0/0	./.	0/0	./.	1/1	1/1	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	./.	0/0	./.	0/0	1/1	./.	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	./.	1/1	0/0	./.	./.	./.	1/1	1/1	1/1	0/0	./.	1/1	1/1	./.	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	./.	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	./.	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	./.	1/1	./.	1/1	0/0	1/1
+3	15605931	SNP-3.15604577.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.864-143A>G|555|LOC_Os03g27230|protein_coding|CODING|LOC_Os03g27230.1|2|1)	GT	1/1	0/0	1/1	1/1	0/1	1/1	./.	0/1	0/1	1/1	0/1	0/0	0/1	./.	0/0	0/0	./.	0/1	1/1	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1
+3	15606188	SNP-3.15604834.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|tgC/tgG|p.Cys326Trp/c.978A>G|555|LOC_Os03g27230|protein_coding|CODING|LOC_Os03g27230.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/1	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	0/0	0/1	0/0	1/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	./.	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	./.	./.	0/0	1/1
+3	15606329	SNP-3.15604975.	A	G	.	.	PR;EFF=synonymous_variant(LOW||gtG/gtG|p.Val373Val/c.1119A>G|555|LOC_Os03g27230|protein_coding|CODING|LOC_Os03g27230.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	./.	./.	./.	0/0	1/1	0/0	1/1	./.	./.	./.	./.	1/1	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	./.	./.	./.	1/1	1/1	1/1	./.	0/0	1/1	./.	0/0	1/1	0/0	./.	1/1	./.	1/1	./.	./.	1/1	./.	1/1	0/0	./.	1/1	0/0	0/0	1/1	./.	./.	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	./.	1/1	1/1	0/0	1/1	./.	0/0	./.	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	./.	1/1	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	1/1	0/0	./.	1/1	1/1	./.	./.	0/0	./.	./.	1/1	./.	./.	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	./.	1/1	0/0	0/0	./.	./.	1/1	0/0
+3	15607445	SNP-3.15606091.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.1387-690A>G|555|LOC_Os03g27230|protein_coding|CODING|LOC_Os03g27230.1|4|1)	GT	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	15610080	SNP-3.15608726.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	./.	0/0	./.	1/1	1/1	./.	./.	0/0	1/1	./.	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15610619	SNP-3.15609265.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15613875	SNP-3.15612521.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/1	0/1	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15615734	SNP-3.15614380.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|caC/caA|p.His124Gln/c.372C>A|953|LOC_Os03g27250|protein_coding|CODING|LOC_Os03g27250.1|4|1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	15617233	SNP-3.15615879.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gaC/gaA|p.Asp372Glu/c.1116C>A|953|LOC_Os03g27250|protein_coding|CODING|LOC_Os03g27250.1|8|1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15618492	SNP-3.15617138.	C	A	.	.	PR;EFF=synonymous_variant(LOW||cAa/cAa|p.Gln581Gln/c.1742C>A|953|LOC_Os03g27250|protein_coding|CODING|LOC_Os03g27250.1|11|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15618508	SNP-3.15617154.	C	A	.	.	PR;EFF=synonymous_variant(LOW||ccA/ccA|p.Pro586Pro/c.1758C>A|953|LOC_Os03g27250|protein_coding|CODING|LOC_Os03g27250.1|11|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	15625137	SNP-3.15623783.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/1	1/1	1/1	0/1	./.	./.	1/1	0/0	0/0	1/1	1/1	1/1	./.	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15625252	SNP-3.15623898.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	0/0	0/0	./.	0/0	1/1	./.	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/1	1/1	0/0	./.	./.	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	15626613	SNP-3.15625259.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|gaG/gaA|p.Glu24Glu/c.72C>A|220|LOC_Os03g27270|protein_coding|CODING|LOC_Os03g27270.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	./.	1/1	0/0	1/1	./.	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15627582	SNP-3.15626228.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	./.	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/1	./.	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15630323	SNP-3.15628969.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.196-350G>T|342|LOC_Os03g27280|protein_coding|CODING|LOC_Os03g27280.1|2|1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15630482	SNP-3.15629128.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.196-509G>T|342|LOC_Os03g27280|protein_coding|CODING|LOC_Os03g27280.1|2|1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	./.	1/1	./.	0/0	1/1	1/1	1/1	0/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	15632541	SNP-3.15631187.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	0/0	1/1	0/0	0/1	1/1	1/1	./.	1/1	./.	0/0	0/1	./.	1/1	1/1	0/0	1/1	./.	1/1	./.	0/0	0/0	./.	0/1	0/1	1/1	1/1	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/1	1/1	0/0	1/1	1/1	./.	0/1	0/0	0/1	./.	0/1	0/1	0/1	1/1	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	./.	0/0	0/1	0/0	0/1	1/1	1/1	0/0	./.	1/1	0/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	15633595	SNP-3.15632241.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15634843	SNP-3.15633489.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	./.	./.	1/1	./.	1/1	1/1	0/1	./.	1/1	./.	0/0	1/1	./.	1/1	0/0	0/0	1/1	1/1	./.	./.	0/0	./.	./.	1/1	0/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	0/0	./.	./.	./.	0/0	0/0	0/0	1/1	./.	./.	1/1	0/0	0/0	./.	./.	0/0	0/0	./.	./.	./.	0/0	0/1	./.	0/0	0/0	0/1	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	./.	./.	0/0	./.	0/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	1/1	0/1	1/1	1/1	1/1	0/1	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	0/0	./.	0/0	./.	./.	0/0	./.	0/1	1/1	./.	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/1	0/0
+3	15635264	SNP-3.15633910.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15638394	SNP-3.15637040.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.36+397A>G|169|LOC_Os03g27290|protein_coding|CODING|LOC_Os03g27290.1|1|1)	GT	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/1	1/1	0/1	./.	1/1	./.	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	0/1	./.	0/0	0/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	0/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/1	./.	0/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/1	0/1	0/0	0/0	0/0	0/0	1/1	0/1	./.	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/1	./.	0/0	./.
+3	15638443	SNP-3.15637089.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.36+446C>A|169|LOC_Os03g27290|protein_coding|CODING|LOC_Os03g27290.1|1|1)	GT	0/0	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15640372	SNP-3.15639018.	C	A	.	.	PR;EFF=splice_region_variant(LOW|||c.39C>A|169|LOC_Os03g27290|protein_coding|CODING|LOC_Os03g27290.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW||gaA/gaA|p.Glu13Glu/c.39C>A|169|LOC_Os03g27290|protein_coding|CODING|LOC_Os03g27290.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	15641375	SNP-3.15640021.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.456+395C>A|169|LOC_Os03g27290|protein_coding|CODING|LOC_Os03g27290.1|4|1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	./.	0/1	0/0	0/0	1/1	./.	0/1	1/1	0/0	0/0	0/1	1/1	./.	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	./.	0/0	0/1	0/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	./.	0/0	./.	./.	1/1	0/0	./.	1/1	1/1	0/0	0/1	0/1	0/0	1/1	0/1	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	15642911	SNP-3.15641557.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15644246	SNP-3.15642892.	C	A	.	.	PR;EFF=synonymous_variant(LOW||caT/caT|p.His56His/c.168G>T|65|LOC_Os03g27300|protein_coding|CODING|LOC_Os03g27300.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	0/0	0/1	0/0	0/1	1/1	0/1	0/0	./.	0/1	0/0	1/1	./.	1/1	0/0	0/0	0/1	1/1	./.	1/1	0/0	0/0	0/0	0/1	0/1	0/1	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/1	0/0	0/1	1/1	1/1	1/1	1/1	./.	./.	0/1	0/0	0/0	0/0	1/1	0/0	0/1	0/1	0/1	0/0	1/1	0/0	0/1	0/0	0/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	./.	0/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/1	1/1	./.	0/0	0/0	0/1	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/1	1/1	0/0
+3	15645382	SNP-3.15644028.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/1	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0
+3	15648914	SNP-3.15647560.	C	A	.	.	PR;EFF=5_prime_UTR_variant(MODIFIER||59|c.-59C>A|334|LOC_Os03g27320|protein_coding|CODING|LOC_Os03g27320.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),5_prime_UTR_variant(MODIFIER||59|c.-59C>A|314|LOC_Os03g27320|protein_coding|CODING|LOC_Os03g27320.2|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),5_prime_UTR_variant(MODIFIER||59|c.-59C>A|309|LOC_Os03g27320|protein_coding|CODING|LOC_Os03g27320.3|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),5_prime_UTR_variant(MODIFIER||59|c.-59C>A|230|LOC_Os03g27320|protein_coding|CODING|LOC_Os03g27320.4|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),5_prime_UTR_variant(MODIFIER||1178|c.-507C>A|224|LOC_Os03g27320|protein_coding|CODING|LOC_Os03g27320.5|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15650573	SNP-3.15649219.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|acG/acA|p.Thr168Thr/c.504C>A|334|LOC_Os03g27320|protein_coding|CODING|LOC_Os03g27320.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW|SILENT|acG/acA|p.Thr168Thr/c.504C>A|314|LOC_Os03g27320|protein_coding|CODING|LOC_Os03g27320.2|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW|SILENT|acG/acA|p.Thr168Thr/c.504C>A|309|LOC_Os03g27320|protein_coding|CODING|LOC_Os03g27320.3|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW|SILENT|acG/acA|p.Thr58Thr/c.174C>A|224|LOC_Os03g27320|protein_coding|CODING|LOC_Os03g27320.5|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW|SILENT|acG/acA|p.Thr168Thr/c.504C>A|230|LOC_Os03g27320|protein_coding|CODING|LOC_Os03g27320.4|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15651375	SNP-3.15650021.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.542-47C>A|334|LOC_Os03g27320|protein_coding|CODING|LOC_Os03g27320.1|5|1),intron_variant(MODIFIER|||c.212-47C>A|224|LOC_Os03g27320|protein_coding|CODING|LOC_Os03g27320.5|4|1),intron_variant(MODIFIER|||c.542-107C>A|314|LOC_Os03g27320|protein_coding|CODING|LOC_Os03g27320.2|5|1),intron_variant(MODIFIER|||c.542-122C>A|309|LOC_Os03g27320|protein_coding|CODING|LOC_Os03g27320.3|5|1)	GT	./.	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15661274	SNP-3.15659920.	A	G	.	.	PR;EFF=5_prime_UTR_variant(MODIFIER||265|c.-265T>C|87|LOC_Os03g27340|protein_coding|CODING|LOC_Os03g27340.1|1|1),5_prime_UTR_variant(MODIFIER||265|c.-265T>C|87|LOC_Os03g27340|protein_coding|CODING|LOC_Os03g27340.2|1|1)	GT	./.	0/0	./.	./.	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	1/1	./.	1/1	1/1	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	0/0	1/1	0/0	0/0	./.	1/1	0/0	1/1	./.	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	1/1	./.	./.	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	./.	0/0	1/1	./.	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	./.	./.	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	1/1	./.	0/0	1/1	./.	1/1
+3	15663019	SNP-3.15661665.	C	A	.	.	PR;EFF=splice_region_variant(LOW|||c.517C>A|505|LOC_Os03g27350|protein_coding|CODING|LOC_Os03g27350.1|3|1),splice_region_variant(LOW|||c.517C>A|474|LOC_Os03g27350|protein_coding|CODING|LOC_Os03g27350.2|3|1),splice_region_variant(LOW|||c.259C>A|388|LOC_Os03g27350|protein_coding|CODING|LOC_Os03g27350.3|4|1),intron_variant(MODIFIER|||c.516+4C>A|505|LOC_Os03g27350|protein_coding|CODING|LOC_Os03g27350.1|3|1),intron_variant(MODIFIER|||c.516+4C>A|474|LOC_Os03g27350|protein_coding|CODING|LOC_Os03g27350.2|3|1),intron_variant(MODIFIER|||c.258+4C>A|388|LOC_Os03g27350|protein_coding|CODING|LOC_Os03g27350.3|4|1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15665019	SNP-3.15663665.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Ctg/Atg|p.Leu392Met/c.1174C>A|474|LOC_Os03g27350|protein_coding|CODING|LOC_Os03g27350.2|8|1),missense_variant(MODERATE|MISSENSE|Ctg/Atg|p.Leu306Met/c.916C>A|388|LOC_Os03g27350|protein_coding|CODING|LOC_Os03g27350.3|9|1),missense_variant(MODERATE|MISSENSE|Ctg/Atg|p.Leu392Met/c.1174C>A|505|LOC_Os03g27350|protein_coding|CODING|LOC_Os03g27350.1|8|1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15665154	SNP-3.15663800.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Gta/Ata|p.Val437Ile/c.1309C>A|505|LOC_Os03g27350|protein_coding|CODING|LOC_Os03g27350.1|8|1|WARNING_REF_DOES_NOT_MATCH_GENOME),intron_variant(MODIFIER|||c.1220-4C>A|474|LOC_Os03g27350|protein_coding|CODING|LOC_Os03g27350.2|8|1),intron_variant(MODIFIER|||c.962-4C>A|388|LOC_Os03g27350|protein_coding|CODING|LOC_Os03g27350.3|9|1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15667170	SNP-3.15665816.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	./.	./.	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	./.	1/1	1/1	./.	1/1	./.	0/0	0/0	1/1	0/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	./.	0/0	0/0	1/1	1/1	1/1	0/1	./.	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	./.	1/1	0/0
+3	15669666	SNP-3.15668312.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0
+3	15670928	SNP-3.15669574.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	./.	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	./.	./.	1/1	0/0	./.	1/1	./.	0/0	1/1	./.	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0
+3	15671045	SNP-3.15669691.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	./.	1/1	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	./.	1/1	0/0	1/1	1/1	./.	1/1	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	./.	./.	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	15672470	SNP-3.15671116.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15674475	SNP-3.15673121.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.96+660C>A|851|LOC_Os03g27370|protein_coding|CODING|LOC_Os03g27370.1|1|1)	GT	0/0	./.	0/0	0/0	1/1	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	./.	0/0	./.	0/0	1/1	0/0	1/1	./.	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	15675533	SNP-3.15674179.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.97-89C>A|851|LOC_Os03g27370|protein_coding|CODING|LOC_Os03g27370.1|1|1)	GT	0/0	1/1	./.	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/1	./.	1/1	./.	1/1	1/1	0/0	1/1	./.	1/1	./.	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	./.	0/0	0/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/1	1/1	1/1	0/0	1/1	./.	0/0	./.	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15678560	SNP-3.15677206.	A	G	.	.	PR;EFF=synonymous_variant(LOW||acG/acG|p.Thr829Thr/c.2487A>G|851|LOC_Os03g27370|protein_coding|CODING|LOC_Os03g27370.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	1/1	0/0	0/0	1/1	./.	0/0	1/1	1/1	./.	0/0	1/1	1/1	1/1	./.	0/0	./.	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	./.	./.	1/1	1/1	1/1	./.	./.	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	1/1	./.	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	./.	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	./.	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	1/1	0/0	0/0
+3	15678743	SNP-3.15677389.	C	A	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||114|c.*114C>A|851|LOC_Os03g27370|protein_coding|CODING|LOC_Os03g27370.1|4|1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	1/1	1/1	./.	0/1	1/1	0/0	./.	0/1	0/1	1/1	0/0	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/1	0/0	0/0	1/1	1/1	1/1	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	15679056	SNP-3.15677702.	C	A	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||427|c.*427C>A|851|LOC_Os03g27370|protein_coding|CODING|LOC_Os03g27370.1|4|1)	GT	0/0	1/1	0/0	0/1	1/1	0/1	1/1	1/1	1/1	0/1	0/0	./.	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	./.	0/1	0/0	0/0	0/1	0/0	./.	0/1	0/0	0/0	0/1	0/1	./.	0/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/1	./.	./.	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0
+3	15680226	SNP-3.15678872.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	./.	./.	1/1	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	./.	0/0	0/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/1	1/1	0/0	./.	0/0	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15683355	SNP-3.15682001.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	./.	1/1	0/0	1/1	./.	1/1	./.	./.	1/1	0/0	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	./.	./.	0/1	1/1	1/1	1/1	./.	0/0	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	./.	./.	1/1	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	./.	./.	1/1	0/0	0/0	1/1	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0
+3	15684816	SNP-3.15683462.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	./.	./.	0/1	0/0	./.	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	./.	0/1	0/0
+3	15685034	SNP-3.15683680.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	./.	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	./.	./.	./.	1/1	1/1	1/1	./.	./.	1/1	./.	./.	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	./.	0/0	1/1	1/1	./.	0/0	./.	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	./.	0/0
+3	15685344	SNP-3.15683990.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0
+3	15686242	SNP-3.15684888.	C	A	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||116|c.*116G>T|315|LOC_Os03g27390|protein_coding|CODING|LOC_Os03g27390.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME),3_prime_UTR_variant(MODIFIER||116|c.*116G>T|315|LOC_Os03g27390|protein_coding|CODING|LOC_Os03g27390.2|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	0/0	./.	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15695215	SNP-3.15693861.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	./.	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/1	0/0	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	15695269	SNP-3.15693915.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	./.	0/0	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	./.	./.	./.	./.	./.	0/0	1/1	./.	0/0	1/1	0/0	./.	./.	./.	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	./.	0/0	./.	0/0	./.	1/1	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	./.	1/1	0/0	1/1	0/0	./.	0/0	1/1	./.	1/1	./.	./.	./.	1/1	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	./.	0/0	./.	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	15696808	SNP-3.15695454.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/1	1/1	0/1	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	1/1	1/1	0/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1
+3	15702651	SNP-3.15701297.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	./.	./.	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	0/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	./.	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0
+3	15703264	SNP-3.15701910.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/1	0/0	0/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/1	./.	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/1	0/0	1/1	0/1	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/1	0/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	0/0	0/1	0/1	0/0	0/0	0/1	0/1	0/0	./.	0/1	./.	0/0	0/1	./.	0/1	./.	0/1	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0
+3	15704365	SNP-3.15703011.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/1	./.	0/0	0/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	0/1	0/0	0/1	0/1	./.	0/0	0/1	0/0	./.	0/0	1/1	0/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15705364	SNP-3.15704010.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	1/1	1/1	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	./.	0/0	0/1	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	1/1	./.	1/1	0/0	1/1	0/1	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0	./.	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	./.	1/1	1/1	./.	0/0	1/1	0/0	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/1	./.	./.	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0
+3	15707329	SNP-3.15705975.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	0/0	1/1	0/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	./.	./.	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/1	0/1	1/1	0/0	0/0	0/0	./.	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	1/1	./.	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/1	1/1	0/0	1/1	1/1	0/0	0/0	./.	./.	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/1	0/0	./.	./.	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15710789	SNP-3.15709435.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15711523	SNP-3.15710169.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/1	0/0	0/0	0/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/0	./.	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/1	0/0
+3	15712612	SNP-3.15711258.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	./.	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15712766	SNP-3.15711412.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	./.	./.	./.	0/0	0/0	./.	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	./.	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	./.	./.	0/0	0/1	0/0	1/1	0/1	0/0	0/0	1/1	0/1	1/1	0/0	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/1	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	15714336	SNP-3.15712982.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15716353	SNP-3.15714999.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15717090	SNP-3.15715736.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	./.	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/1	0/0	1/1	0/0
+3	15718646	SNP-3.15717292.	C	A	.	.	PR;EFF=splice_region_variant(LOW|||c.1254G>T|483|LOC_Os03g27400|protein_coding|CODING|LOC_Os03g27400.1|5|1),synonymous_variant(LOW|SILENT|acG/acT|p.Thr418Thr/c.1254G>T|483|LOC_Os03g27400|protein_coding|CODING|LOC_Os03g27400.1|5|1)	GT	0/0	1/1	0/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15719030	SNP-3.15717676.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Gct/Tct|p.Ala314Ser/c.940G>T|483|LOC_Os03g27400|protein_coding|CODING|LOC_Os03g27400.1|4|1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15720172	SNP-3.15718818.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.39-70T>C|483|LOC_Os03g27400|protein_coding|CODING|LOC_Os03g27400.1|1|1)	GT	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	1/1	./.	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	./.	0/0	./.	0/1	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	15720536	SNP-3.15719182.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.39-434T>C|483|LOC_Os03g27400|protein_coding|CODING|LOC_Os03g27400.1|1|1)	GT	./.	./.	./.	0/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	0/0	0/0	0/1	1/1	0/0	0/0	./.	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/1	0/0	0/1	./.	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/1	1/1	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	./.	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0
+3	15720660	SNP-3.15719306.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.39-558T>C|483|LOC_Os03g27400|protein_coding|CODING|LOC_Os03g27400.1|1|1)	GT	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	1/1	0/0	0/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/1	0/1	0/1	0/0	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/1	0/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	15720901	SNP-3.15719547.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.38+731G>T|483|LOC_Os03g27400|protein_coding|CODING|LOC_Os03g27400.1|1|1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15720951	SNP-3.15719597.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.38+681T>C|483|LOC_Os03g27400|protein_coding|CODING|LOC_Os03g27400.1|1|1)	GT	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	./.	0/0	./.	./.	./.	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	./.	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0
+3	15722768	SNP-3.15721414.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	./.	0/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/1	0/0	./.	0/0	0/1	0/0	1/1	0/0	./.	0/0	0/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1
+3	15722844	SNP-3.15721490.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/1	0/0	./.	0/0	0/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	./.	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	15723092	SNP-3.15721738.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	./.	./.	1/1	0/0	1/1	1/1	1/1	0/0	1/1	./.	./.	1/1	./.	./.	1/1	0/0	1/1	1/1	./.	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	./.	0/0	0/0	./.	1/1	0/0	0/0	1/1	./.	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0
+3	15725488	SNP-3.15724134.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15726847	SNP-3.15725493.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15729319	SNP-3.15727965.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.938-336G>T|405|LOC_Os03g27420|protein_coding|CODING|LOC_Os03g27420.1|6|1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/1	0/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15729443	SNP-3.15728089.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.938-460G>T|405|LOC_Os03g27420|protein_coding|CODING|LOC_Os03g27420.1|6|1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15730077	SNP-3.15728723.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.937+264G>T|405|LOC_Os03g27420|protein_coding|CODING|LOC_Os03g27420.1|6|1)	GT	0/0	1/1	./.	0/0	./.	0/0	1/1	1/1	1/1	./.	./.	./.	0/0	./.	./.	1/1	1/1	./.	1/1	0/1	0/1	./.	./.	0/0	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0	./.	0/0	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	1/1	./.	0/1	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0
+3	15730296	SNP-3.15728942.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.937+45G>T|405|LOC_Os03g27420|protein_coding|CODING|LOC_Os03g27420.1|6|1)	GT	0/0	1/1	0/0	0/0	./.	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/1	0/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/1	0/0	0/0	1/1	0/0
+3	15732998	SNP-3.15731644.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	./.	0/0	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15733340	SNP-3.15731986.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	./.	0/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15736711	SNP-3.15735357.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15740027	SNP-3.15738673.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	0/1	./.	1/1	0/0	./.	./.	1/1	0/0	0/1	0/0	0/0	0/1	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/1	0/0	0/0	./.	./.	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	./.	1/1	0/0
+3	15741078	SNP-3.15739724.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	./.	0/1	0/0	1/1	./.	1/1	./.	0/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	./.	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/1	0/0
+3	15742728	SNP-3.15741374.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15743490	SNP-3.15742136.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15744367	SNP-3.15743013.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	./.	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/1	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/1	1/1	./.
+3	15745506	SNP-3.15744152.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cCc/cAc|p.Pro69His/c.206C>A|150|LOC_Os03g27440|protein_coding|CODING|LOC_Os03g27440.1|1|1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/1	0/0	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	0/0	./.	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/1	0/1	0/1	0/0	1/1	0/1	./.	0/0	0/1	1/1	0/0	./.	0/0	./.	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/1	0/1	0/1	1/1	0/0
+3	15748572	SNP-3.15747218.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.-96-80C>A|175|LOC_Os03g27450|protein_coding|CODING|LOC_Os03g27450.2|1|1),intron_variant(MODIFIER|||c.93+254C>A|203|LOC_Os03g27450|protein_coding|CODING|LOC_Os03g27450.1|2|1)	GT	0/0	0/1	0/0	0/0	1/1	0/0	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15750549	SNP-3.15749195.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.406-437C>A|203|LOC_Os03g27450|protein_coding|CODING|LOC_Os03g27450.1|5|1),intron_variant(MODIFIER|||c.322-437C>A|175|LOC_Os03g27450|protein_coding|CODING|LOC_Os03g27450.2|5|1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15751111	SNP-3.15749757.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.509+22C>A|203|LOC_Os03g27450|protein_coding|CODING|LOC_Os03g27450.1|6|1),intron_variant(MODIFIER|||c.425+22C>A|175|LOC_Os03g27450|protein_coding|CODING|LOC_Os03g27450.2|6|1)	GT	./.	1/1	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	./.	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15751427	SNP-3.15750073.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|ttT/ttA|p.Phe171Leu/c.513C>A|175|LOC_Os03g27450|protein_coding|CODING|LOC_Os03g27450.2|7|1|WARNING_REF_DOES_NOT_MATCH_GENOME),missense_variant(MODERATE|MISSENSE|ttT/ttA|p.Phe199Leu/c.597C>A|203|LOC_Os03g27450|protein_coding|CODING|LOC_Os03g27450.1|7|1|WARNING_REF_DOES_NOT_MATCH_GENOME),3_prime_UTR_variant(MODIFIER||3412|c.*1612G>T|405|LOC_Os03g27460|protein_coding|CODING|LOC_Os03g27460.2|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15762346	SNP-3.15760992.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	./.	1/1	1/1	0/1	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	./.	./.	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	./.	1/1	0/0	1/1	./.	./.	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/1	0/0	0/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	./.	0/0
+3	15763066	SNP-3.15761712.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	./.	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	15764011	SNP-3.15762657.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cAg/cCg|p.Gln414Pro/c.1241T>C|470|LOC_Os03g27480|protein_coding|CODING|LOC_Os03g27480.1|11|1|WARNING_REF_DOES_NOT_MATCH_GENOME),missense_variant(MODERATE|MISSENSE|cAg/cCg|p.Gln413Pro/c.1238T>C|469|LOC_Os03g27480|protein_coding|CODING|LOC_Os03g27480.2|11|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	./.	0/1	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/1	./.	0/1	1/1	0/1	./.	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	./.	./.	0/1	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/1	0/1	0/0	0/1	0/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0
+3	15766609	SNP-3.15765255.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ggA/ggT|p.Gly134Gly/c.402G>T|470|LOC_Os03g27480|protein_coding|CODING|LOC_Os03g27480.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW|SILENT|ggA/ggT|p.Gly134Gly/c.402G>T|469|LOC_Os03g27480|protein_coding|CODING|LOC_Os03g27480.2|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	1/1	./.	1/1	./.	1/1	0/0	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	./.	0/0	./.	./.	./.	./.	1/1	1/1	1/1	1/1	./.	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	./.	./.	./.	0/0	1/1	1/1	./.	0/0	1/1	./.	./.	0/0	./.	1/1	0/0	./.	./.	./.	1/1	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	15766800	SNP-3.15765446.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Gtc/Ttc|p.Val104Phe/c.310G>T|470|LOC_Os03g27480|protein_coding|CODING|LOC_Os03g27480.1|3|1),missense_variant(MODERATE|MISSENSE|Gtc/Ttc|p.Val104Phe/c.310G>T|469|LOC_Os03g27480|protein_coding|CODING|LOC_Os03g27480.2|3|1)	GT	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	./.	./.	0/0	./.	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	./.	0/1	./.	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	./.	0/0	./.	./.	0/0	1/1	1/1	0/0	0/0	1/1	./.	0/0	./.	1/1	0/0	1/1	1/1	0/0	1/1	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0
+3	15767218	SNP-3.15765864.	C	A	.	.	PR;EFF=synonymous_variant(LOW||aTc/aTc|p.Ile29Ile/c.86G>T|469|LOC_Os03g27480|protein_coding|CODING|LOC_Os03g27480.2|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW||aTc/aTc|p.Ile29Ile/c.86G>T|470|LOC_Os03g27480|protein_coding|CODING|LOC_Os03g27480.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/1	1/1	0/0	1/1	1/1	./.	./.	0/0	./.	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/1	0/0	0/0	0/0	1/1	0/0	./.	./.	1/1	./.	0/1	./.	1/1	0/0	1/1	1/1	1/1	0/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	15769262	SNP-3.15767908.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15769501	SNP-3.15768147.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/1	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	./.	1/1	0/1	1/1	0/1	./.	1/1	0/1	0/1	1/1	0/1	1/1	0/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	1/1	0/1	./.	0/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	./.	1/1	0/0	./.	0/1	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	./.	1/1	1/1	0/0	0/1	1/1	1/1	0/0	1/1	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/1	0/1	0/1	./.	0/0	0/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	./.	0/0	0/0	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	1/1	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1
+3	15770793	SNP-3.15769439.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.267+108T>C|113|LOC_Os03g27484|protein_coding|CODING|LOC_Os03g27484.1|3|1)	GT	./.	0/0	0/1	1/1	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	./.	./.	0/1	0/1	0/1	0/1	0/1	1/1	./.	0/1	./.	./.	0/1	0/0	0/1	0/1	1/1	0/0	1/1	0/1	0/1	0/1	0/1	0/1	0/1	0/1	./.	./.	0/1	1/1	1/1	./.	0/1	0/1	./.	0/0	./.	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	./.	./.	1/1	1/1	0/0	0/1	1/1	0/1	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/1	0/1	0/1	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	./.	0/0	./.	0/1	0/1	1/1	1/1	0/1	0/0	./.	0/0	0/0	./.	0/1	0/1	0/0	1/1	1/1	0/1	0/1	1/1	0/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	./.	0/1	0/1	0/1	1/1	0/1	./.	0/1	0/1	0/1	0/1	./.	0/0	0/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	./.	./.	0/1	0/0	0/1
+3	15771714	SNP-3.15770360.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.157+486G>T|113|LOC_Os03g27484|protein_coding|CODING|LOC_Os03g27484.1|2|1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/1	0/0	0/0	0/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	./.	1/1	0/0	1/1	./.	1/1	0/0	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	1/1	0/0
+3	15773322	SNP-3.15771968.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	1/1	./.	0/0	0/0	1/1	0/0	./.	1/1	./.	0/0	1/1	./.	1/1	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	1/1	0/0	./.	0/0	./.	1/1	1/1	./.	1/1	0/0	./.	0/0	1/1	./.	0/0	1/1	0/0	./.	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	./.	1/1	0/0	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15775573	SNP-3.15774219.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.259-421C>A|122|LOC_Os03g27490|protein_coding|CODING|LOC_Os03g27490.1|1|1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/1	0/1	0/1	0/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	0/0	0/0	0/0	1/1	0/0	./.	./.	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	0/0	0/0	1/1	1/1	1/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0
+3	15776058	SNP-3.15774704.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aCc/aAc|p.Thr108Asn/c.323C>A|122|LOC_Os03g27490|protein_coding|CODING|LOC_Os03g27490.1|2|1)	GT	0/0	1/1	0/0	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15777218	SNP-3.15775864.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	1/1	0/0	0/0	1/1	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	./.	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15779971	SNP-3.15778617.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15780788	SNP-3.15779434.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ggA/ggT|p.Gly280Gly/c.840G>T|337|LOC_Os03g27510|protein_coding|CODING|LOC_Os03g27510.1|9|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	./.	0/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	./.	0/0	./.	1/1	0/1	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	./.	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	./.	0/0	1/1	0/0
+3	15782589	SNP-3.15781235.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.375+105G>T|337|LOC_Os03g27510|protein_coding|CODING|LOC_Os03g27510.1|4|1)	GT	./.	0/1	./.	./.	./.	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	./.	0/1	0/1	0/1	./.	0/0	0/0	./.	./.	./.	0/1	0/0	0/0	0/1	0/0	0/1	0/0	./.	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/1	0/1	0/0	0/0	1/1	1/1	0/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/1	1/1	1/1	0/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/1	0/0	0/0	1/1	0/0
+3	15782853	SNP-3.15781499.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.307-91G>T|337|LOC_Os03g27510|protein_coding|CODING|LOC_Os03g27510.1|3|1)	GT	0/0	0/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/1	0/1	0/0	./.	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	./.	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	1/1	0/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	1/1	0/0
+3	15784197	SNP-3.15782843.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aaG/aaT|p.Lys50Asn/c.150G>T|337|LOC_Os03g27510|protein_coding|CODING|LOC_Os03g27510.1|2|1)	GT	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	./.	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	./.	0/1	./.	./.	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	./.	1/1	0/1	0/0	./.	1/1	1/1	1/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15792724	SNP-3.15791370.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Agg/Tgg|p.Arg142Trp/c.424G>T|390|LOC_Os03g27530|protein_coding|CODING|LOC_Os03g27530.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	./.	0/0	0/1	0/0	./.	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	15794165	SNP-3.15792811.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.413-1430G>T|390|LOC_Os03g27530|protein_coding|CODING|LOC_Os03g27530.1|2|1)	GT	0/0	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	./.	1/1	./.	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15794967	SNP-3.15793613.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.412+675G>T|390|LOC_Os03g27530|protein_coding|CODING|LOC_Os03g27530.1|2|1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15795700	SNP-3.15794346.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|atG/atT|p.Met118Ile/c.354G>T|390|LOC_Os03g27530|protein_coding|CODING|LOC_Os03g27530.1|2|1)	GT	0/0	0/1	0/0	0/0	./.	0/0	0/1	0/1	0/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	1/1	./.	0/1	./.	0/0	0/0	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	./.	0/0
+3	15795737	SNP-3.15794383.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cAc/cTc|p.His106Leu/c.317G>T|390|LOC_Os03g27530|protein_coding|CODING|LOC_Os03g27530.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	0/0	1/1	0/1	1/1	1/1	./.	0/0	./.	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	1/1	1/1	0/1	0/0	1/1	./.	0/0	./.	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	0/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	./.	./.	0/0	0/0	1/1	1/1	0/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	15795753	SNP-3.15794399.	C	A	.	.	PR;EFF=synonymous_variant(LOW||Tgt/Tgt|p.Cys101Cys/c.301G>T|390|LOC_Os03g27530|protein_coding|CODING|LOC_Os03g27530.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	0/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/1	1/1	1/1	0/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0	1/1	1/1	./.	./.	1/1	./.	./.	0/0	1/1	1/1	0/0	0/0	./.	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	15796375	SNP-3.15795021.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.128+156G>T|390|LOC_Os03g27530|protein_coding|CODING|LOC_Os03g27530.1|1|1)	GT	0/0	1/1	0/0	0/0	./.	0/0	./.	1/1	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15802277	SNP-3.15800923.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	1/1	./.	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	./.	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	./.	1/1	1/1	0/0	0/1	1/1	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	./.	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/1	1/1	0/0	0/0	0/1	1/1	1/1	0/0	0/1	1/1	0/0	1/1	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	1/1	1/1	0/0
+3	15803454	SNP-3.15802100.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	0/0	1/1	0/0	1/1	./.	1/1	0/1	1/1	0/0	1/1	./.	1/1	1/1	0/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	0/0	0/0	0/1	0/0	0/0	0/1	0/0	1/1	0/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15803470	SNP-3.15802116.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	./.	0/0	./.	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	./.	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	./.	0/0	1/1	./.	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	./.	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	1/1	./.	0/0	0/0	./.	./.	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0
+3	15804561	SNP-3.15803207.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15804879	SNP-3.15803525.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15808214	SNP-3.15806860.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15808331	SNP-3.15806977.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	./.	0/0	1/1	./.	0/0	1/1	./.	./.	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	./.	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	1/1	0/0	./.	./.	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15808814	SNP-3.15807460.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15809084	SNP-3.15807730.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	0/0	0/0	1/1	0/0	./.	./.	./.	0/0	1/1	./.	0/0	0/0	1/1	1/1	1/1	./.	1/1	./.	0/1	./.	0/0	0/0	./.	1/1	1/1	./.	1/1	0/0	./.	./.	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15809261	SNP-3.15807907.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	0/1	0/1	0/1	0/1	0/1	1/1	./.	./.	0/1	0/1	./.	1/1	1/1	./.	0/0	0/0	1/1	./.	1/1	./.	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	1/1	0/1	./.	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	0/1	0/0	0/1	./.	0/0	./.	0/0	./.	0/0	0/1	./.	0/1	1/1	1/1	0/1	1/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	1/1	1/1	./.	0/1	1/1	./.	0/1	./.	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	1/1	./.	./.	0/0	0/0	0/0	0/1	1/1	1/1	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/1	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	./.	./.	1/1	0/0	0/1	0/1	0/0	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	15809606	SNP-3.15808252.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/1	./.	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/1	1/1	1/1	0/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15809832	SNP-3.15808478.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/1	0/0	0/0	0/1	0/0	0/1	./.	0/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	./.	0/1	0/0	0/0	./.	./.	./.	./.	1/1	0/0	0/1	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	0/1	0/0	0/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/1	1/1	0/0	1/1	0/1	./.	0/0	1/1	./.	1/1	0/0	1/1	1/1	./.	0/1	0/1	1/1	1/1	1/1	0/0	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	./.	0/0
+3	15810017	SNP-3.15808663.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	./.	./.	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15812305	SNP-3.15810951.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aaC/aaA|p.Asn30Lys/c.90C>A|128|LOC_Os03g27580|protein_coding|CODING|LOC_Os03g27580.1|1|1)	GT	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15813860	SNP-3.15812506.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15814019	SNP-3.15812665.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/1	0/0	./.	1/1	1/1	0/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	1/1	0/1	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15814535	SNP-3.15813181.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	1/1	0/1	0/0	./.	./.	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	./.	0/1	0/0	0/1	0/1	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	0/1	0/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/1	0/0	1/1	0/1	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/1	0/1	1/1	0/0	0/0	0/0	0/0	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/1	0/1	1/1	0/1	1/1	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	./.	1/1	0/0	1/1	./.	./.	1/1	./.	./.	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/1	./.	./.	0/0	1/1
+3	15814961	SNP-3.15813607.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	1/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15815100	SNP-3.15813746.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	0/1	0/0	0/1	./.	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	./.	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/1	0/0
+3	15815426	SNP-3.15814072.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	./.	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	./.	1/1	0/0	1/1	1/1	./.	./.	0/0	0/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	./.	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/1	0/0	./.	0/0	0/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	./.	1/1	./.	1/1	0/0	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	./.	0/1	0/0	1/1	1/1	./.	./.	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	15816152	SNP-3.15814798.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	0/1	1/1	0/1	1/1	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	./.	1/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15819390	SNP-3.15818036.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15820972	SNP-3.15819618.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	1/1	./.	./.	1/1	./.	./.	1/1	0/0	0/0	0/0	./.	./.	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	./.	1/1	0/0	./.	1/1	./.	./.	0/0	0/0	0/0	./.	./.	./.	./.	./.	./.	./.	1/1	./.	0/0	0/0	0/0	./.	0/0	./.	./.	./.	0/0	./.	0/0	./.	0/0	./.	./.	0/0	0/0	./.	./.	1/1	0/0	1/1	1/1	0/0	1/1	0/0	./.	1/1	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	15824185	SNP-3.15822831.	C	A	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||27|c.*27G>T|470|LOC_Os03g27590|protein_coding|CODING|LOC_Os03g27590.1|12|1|WARNING_REF_DOES_NOT_MATCH_GENOME),3_prime_UTR_variant(MODIFIER||1505|c.*960G>T|421|LOC_Os03g27590|protein_coding|CODING|LOC_Os03g27590.2|12|1|WARNING_REF_DOES_NOT_MATCH_GENOME),3_prime_UTR_variant(MODIFIER||1964|c.*969G>T|354|LOC_Os03g27590|protein_coding|CODING|LOC_Os03g27590.3|8|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	./.	0/0	./.	0/0	1/1	1/1	./.	0/0	./.	./.	./.	./.	./.	./.	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	./.	1/1	1/1	0/0	./.	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	./.	./.	./.	0/0	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	./.	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	1/1	./.	0/0	./.	0/0	0/0	./.	0/0
+3	15824804	SNP-3.15823450.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|acC/acT|p.Thr427Thr/c.1281G>T|470|LOC_Os03g27590|protein_coding|CODING|LOC_Os03g27590.1|11|1|WARNING_REF_DOES_NOT_MATCH_GENOME),3_prime_UTR_variant(MODIFIER||1345|c.*350G>T|354|LOC_Os03g27590|protein_coding|CODING|LOC_Os03g27590.3|8|1|WARNING_REF_DOES_NOT_MATCH_GENOME),3_prime_UTR_variant(MODIFIER||886|c.*801G>T|421|LOC_Os03g27590|protein_coding|CODING|LOC_Os03g27590.2|11|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	0/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/1	0/0	0/0	0/0	./.	0/1	0/1	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	./.	1/1	0/1	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/1	0/0	0/0	1/1	0/1	0/1	0/0	0/0	./.	0/0	0/0	0/1	1/1	0/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/1	./.	0/0	1/1	0/0
+3	15826299	SNP-3.15824945.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|aaC/aaT|p.Asn305Asn/c.915G>T|354|LOC_Os03g27590|protein_coding|CODING|LOC_Os03g27590.3|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW|SILENT|aaC/aaT|p.Asn343Asn/c.1029G>T|470|LOC_Os03g27590|protein_coding|CODING|LOC_Os03g27590.1|7|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW|SILENT|aaC/aaT|p.Asn343Asn/c.1029G>T|421|LOC_Os03g27590|protein_coding|CODING|LOC_Os03g27590.2|7|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/1	1/1	0/1	0/0	1/1	./.	0/0	./.	0/0	0/0	1/1	./.	0/1	0/1	0/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/1	0/1	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	1/1	0/0	1/1	./.	0/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15826347	SNP-3.15824993.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gaG/gaT|p.Glu289Asp/c.867G>T|354|LOC_Os03g27590|protein_coding|CODING|LOC_Os03g27590.3|6|1),missense_variant(MODERATE|MISSENSE|gaG/gaT|p.Glu327Asp/c.981G>T|470|LOC_Os03g27590|protein_coding|CODING|LOC_Os03g27590.1|7|1),missense_variant(MODERATE|MISSENSE|gaG/gaT|p.Glu327Asp/c.981G>T|421|LOC_Os03g27590|protein_coding|CODING|LOC_Os03g27590.2|7|1)	GT	0/0	0/1	0/0	0/0	0/1	0/0	1/1	0/1	0/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/1	0/0	1/1	1/1	./.	./.	0/0	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/1	0/1	0/1	0/0	0/1	0/0	1/1	0/0	0/1	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/1	0/0
+3	15830365	SNP-3.15829011.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15833405	SNP-3.15832051.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/1	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	./.	1/1	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	./.	./.	0/0	0/0	0/1	0/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15833795	SNP-3.15832441.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/1	0/1	1/1	./.	0/0	1/1	1/1	0/1	0/1	0/0	0/0	0/1	./.	./.	./.	1/1	0/0	./.	0/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	0/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/1	1/1	./.	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	./.	./.	0/1	1/1	./.	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15835616	SNP-3.15834262.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	0/0	0/0	0/1	0/0	1/1	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/1	./.	./.	1/1	1/1	0/0	0/0	0/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/1	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	15836215	SNP-3.15834861.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	./.	./.	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	./.	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	./.	1/1	1/1	0/0	./.	0/0	./.	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	./.	1/1	0/0	./.	./.	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	./.	0/0	0/0	1/1	1/1	./.	./.	./.	1/1	./.	./.	0/0	0/0	1/1	1/1	./.	1/1	./.	0/0	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.
+3	15836610	SNP-3.15835256.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	./.	0/0	./.	./.	0/1	./.	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	./.	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/1	./.	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15839721	SNP-3.15838367.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	0/0	./.	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	0/0	1/1	1/1	0/0	0/0	0/0	./.	1/1	./.	./.	./.	./.	./.	1/1	1/1	./.	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.	./.	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	./.	./.	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15841147	SNP-3.15839793.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	./.	./.	0/0	0/0	1/1	0/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15842052	SNP-3.15840698.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ggA/ggT|p.Gly101Gly/c.303G>T|151|LOC_Os03g27630|protein_coding|CODING|LOC_Os03g27630.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	./.	./.	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0
+3	15842242	SNP-3.15840888.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.288+101G>T|151|LOC_Os03g27630|protein_coding|CODING|LOC_Os03g27630.1|2|1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	1/1	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15847180	SNP-3.15845826.	C	A	.	.	PR;EFF=synonymous_variant(LOW||Atc/Atc|p.Ile131Ile/c.391C>A|253|LOC_Os03g27640|protein_coding|CODING|LOC_Os03g27640.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	./.	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/1	0/0	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/1	1/1	./.	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	./.	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	./.	./.	0/0	1/1	0/0	./.	0/0	0/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	./.	1/1	0/0
+3	15847403	SNP-3.15846049.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cCt/cAt|p.Pro205His/c.614C>A|253|LOC_Os03g27640|protein_coding|CODING|LOC_Os03g27640.1|3|1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15847427	SNP-3.15846073.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aTt/aAt|p.Ile213Asn/c.638C>A|253|LOC_Os03g27640|protein_coding|CODING|LOC_Os03g27640.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/1	0/0	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/1	0/0	1/1	./.	0/1	0/0	1/1	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/1	0/0
+3	15847481	SNP-3.15846127.	C	A	.	.	PR;EFF=synonymous_variant(LOW||tAc/tAc|p.Tyr231Tyr/c.692C>A|253|LOC_Os03g27640|protein_coding|CODING|LOC_Os03g27640.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15848368	SNP-3.15847014.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	./.	1/1	0/0	1/1	./.	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	./.	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	0/1	0/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	0/1	./.	0/1	0/0	1/1	0/1	0/0	0/1	0/1	1/1	1/1	0/0	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15848764	SNP-3.15847410.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	1/1	./.	1/1	0/1	1/1	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	0/1	0/1	0/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/1	./.	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/1	./.	./.	1/1	0/0	1/1
+3	15848878	SNP-3.15847524.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15853768	SNP-3.15852414.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/1	./.	0/1	0/1	1/1	0/1	0/1	./.	0/1	0/0	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	0/1	1/1	./.	0/0	1/1	0/1	./.	0/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	./.	0/0	1/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	1/1	0/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/1	1/1	0/0	./.	0/0	0/0	1/1	./.	1/1	0/1	0/0	0/0	0/1	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/1	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/1
+3	15857444	SNP-3.15856090.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.427-46G>T|569|LOC_Os03g27670|protein_coding|CODING|LOC_Os03g27670.1|1|1)	GT	0/0	1/1	0/0	0/0	0/1	0/0	0/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	0/1	1/1	./.	1/1	0/0	1/1	1/1	0/1	0/1	0/0	./.	./.	0/1	0/1	0/1	1/1	./.	./.	0/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/1	1/1	0/0	0/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	./.	./.	1/1	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/1	./.	0/0	0/1	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	0/0	0/1	1/1	0/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15860365	SNP-3.15859011.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/1	0/0	./.	0/0	0/0	0/1	0/1	1/1	0/1	0/0	1/1	0/1	0/0	1/1	0/0	0/0	./.	0/1	0/1	0/1	./.	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	./.	1/1	./.	1/1	1/1	0/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/1	./.	0/1	./.	./.	1/1	0/1	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15860636	SNP-3.15859282.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/1	0/0	0/1	./.	0/0	0/0	1/1	./.	0/0	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15862776	SNP-3.15861422.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	15865627	SNP-3.15864273.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.41-1006G>T|190|LOC_Os03g27680|protein_coding|CODING|LOC_Os03g27680.1|1|1)	GT	./.	1/1	./.	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/1	0/0	./.	1/1	1/1	./.	0/1	./.	1/1	./.	1/1	1/1	0/0	./.	0/1	1/1	./.	1/1	1/1	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0
+3	15865779	SNP-3.15864425.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.41-1158G>T|190|LOC_Os03g27680|protein_coding|CODING|LOC_Os03g27680.1|1|1)	GT	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15867554	SNP-3.15866200.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	1/1	./.	0/0	1/1	./.	1/1	0/1	1/1	0/0	0/0	0/1	0/1	0/1	0/0	1/1	0/1	0/0	1/1	./.	0/0	0/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/1	0/1	./.	0/0	0/0	0/0	0/0	0/1	0/1	./.	0/1	0/1	./.	0/1	./.	1/1	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	./.	0/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/1	1/1	0/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	./.	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	1/1	1/1	./.	./.	0/1	0/0	1/1	0/0
+3	15869927	SNP-3.15868573.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	./.	0/0	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	./.	0/0
+3	15869964	SNP-3.15868610.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	./.	0/0	0/1	1/1	1/1	0/1	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	./.	./.	./.	0/0	0/0	0/1	0/0	./.	./.	./.	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/1	0/1	0/0	0/1	./.	0/1	0/1	1/1	0/1	0/1	1/1	1/1	0/1	0/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/1	0/0	1/1	1/1	0/1	0/1	1/1	0/1	0/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	./.	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	./.	0/0	0/0	./.	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	./.	./.	0/0	1/1	./.	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15871283	SNP-3.15869929.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	./.	0/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	./.	./.	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/1	1/1	0/0
+3	15871582	SNP-3.15870228.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	./.	1/1	./.	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15872706	SNP-3.15871352.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15873707	SNP-3.15872353.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aTa/aAa|p.Ile12Lys/c.35C>A|102|LOC_Os03g27690|protein_coding|CODING|LOC_Os03g27690.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	0/0	1/1	./.	1/1	./.	1/1	0/0	0/1	0/1	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0
+3	15874648	SNP-3.15873294.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	0/0	./.	0/0	1/1	1/1	1/1	0/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/1	./.	0/0	1/1	0/0
+3	15877499	SNP-3.15876145.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15877965	SNP-3.15876611.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.471-19G>T|214|LOC_Os03g27700|protein_coding|CODING|LOC_Os03g27700.1|4|1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1	./.	./.	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15881921	SNP-3.15880567.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	./.	./.	0/1	./.	./.	0/0	./.	0/0	./.	1/1	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/1	./.	0/0	0/1	1/1	./.	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	./.	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	./.	./.	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	15883684	SNP-3.15882330.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.52+109A>G|425|LOC_Os03g27710|protein_coding|CODING|LOC_Os03g27710.1|1|1)	GT	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	1/1	1/1	./.	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	./.	./.	./.	./.	./.	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	./.	./.	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	./.	./.	1/1	./.	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	./.	0/0	./.	./.	0/0	1/1
+3	15884489	SNP-3.15883135.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.52+914C>A|425|LOC_Os03g27710|protein_coding|CODING|LOC_Os03g27710.1|1|1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	0/1	1/1	1/1	0/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	./.	./.	0/0	1/1	0/1	0/0	./.	1/1	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	./.	0/0	1/1	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15886037	SNP-3.15884683.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|gtC/gtA|p.Val193Val/c.579C>A|425|LOC_Os03g27710|protein_coding|CODING|LOC_Os03g27710.1|2|1)	GT	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	./.	1/1	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	./.	0/0	1/1	0/0	./.	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	./.	0/0	./.	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	1/1	0/0	./.	1/1	0/0	1/1	0/0	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	./.	./.	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	./.	./.	./.	1/1	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1
+3	15886252	SNP-3.15884898.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.588+206C>A|425|LOC_Os03g27710|protein_coding|CODING|LOC_Os03g27710.1|2|1)	GT	0/0	0/1	0/0	0/0	1/1	0/0	0/1	0/1	./.	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	1/1	1/1	./.	./.	./.	0/0	1/1	./.	0/1	./.	0/0	0/1	./.	0/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/1	./.	./.	0/0	1/1	0/0	0/1	0/0	1/1	0/1	0/0	0/0	0/1	./.	1/1	0/0	./.	1/1	0/0	0/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/1	0/0
+3	15886445	SNP-3.15885091.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.589-254C>A|425|LOC_Os03g27710|protein_coding|CODING|LOC_Os03g27710.1|2|1)	GT	0/0	1/1	0/0	0/0	0/1	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	0/1	0/0	1/1	1/1	./.	./.	0/0	./.	1/1	./.	./.	./.	1/1	1/1	1/1	./.	0/1	0/0	0/0	0/1	0/0	./.	0/0	0/1	0/0	./.	0/0	1/1	0/0	./.	0/0	0/1	0/0	0/0	./.	0/1	0/1	1/1	0/0	./.	1/1	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15897972	SNP-3.15896618.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	./.	./.	0/0	./.	./.	1/1	./.	0/0	1/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	./.	1/1	./.	0/0	0/1	./.	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	./.	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/1	1/1	1/1	./.	./.	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	./.	1/1	./.	1/1	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15898240	SNP-3.15896886.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	./.	0/0	./.	1/1	1/1	0/0	0/0	./.	0/0	./.	./.	1/1	./.	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	./.	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	1/1	0/0
+3	15900299	SNP-3.15898945.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	1/1	0/0	1/1	0/0	./.	1/1	1/1	0/0	./.	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	./.	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	./.	./.	1/1	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	./.	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	./.	./.	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	./.	0/0	./.	1/1	./.	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	./.	1/1	0/0	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	1/1	0/0	./.	1/1	1/1	./.	./.	0/0	./.	0/0	./.	./.	./.	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	./.	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0
+3	15902939	SNP-3.15901585.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	./.	0/0	1/1	./.	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0	./.	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	./.	./.	./.	1/1	0/0
+3	15903204	SNP-3.15901850.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	./.	0/0	1/1	0/0	1/1	1/1	./.	0/0	1/1	./.	./.	0/0	./.	./.	1/1	./.	1/1	./.	1/1	1/1	./.	0/0	./.	./.	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	./.	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	0/0	1/1	1/1	./.	./.	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	./.	1/1	0/0
+3	15903642	SNP-3.15902288.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0
+3	15904461	SNP-3.15903107.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	./.	0/0	0/0	0/0	./.	1/1	./.	0/0	./.	1/1	1/1	./.	0/0	0/0	./.	1/1	1/1	1/1	./.	0/0	./.	1/1	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	1/1	0/0	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	./.	0/0	./.	./.	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	./.	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0
+3	15907342	SNP-3.15905988.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	./.	0/0	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15910577	SNP-3.15909223.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Gct/Tct|p.Ala49Ser/c.145G>T|308|LOC_Os03g27760|protein_coding|CODING|LOC_Os03g27760.1|2|1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15912349	SNP-3.15910995.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	./.	0/0	0/1	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/1	./.	0/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	./.	0/0	1/1	1/1	0/1	./.	0/0	0/1	./.	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/1	./.	0/0	1/1	./.	./.	0/1	0/1	0/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/1	1/1	./.	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	15912431	SNP-3.15911077.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/1	0/0	0/0	0/1	0/0	0/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/1	1/1	./.	./.	0/0	1/1	./.	./.	1/1	0/0	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	./.	0/1	./.	0/0	./.	0/0	1/1	0/0	0/1	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/1	0/0
+3	15915064	SNP-3.15913710.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	15915708	SNP-3.15914354.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/1	0/1	1/1	0/0	1/1	./.	1/1	1/1	0/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	1/1	1/1	0/0	./.	./.	1/1	0/0	1/1	0/0	0/0	0/1	1/1	0/1	0/0	0/0	0/0	./.	1/1	./.	./.	0/1	0/1	./.	1/1	0/1	0/1	0/0	0/0	./.	0/0	0/0	0/1	./.	1/1	0/1	1/1	1/1	1/1	0/0	./.	0/0	0/1	0/1	0/1	./.	1/1	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/1	./.	0/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/1	./.	./.	0/1	0/1	0/1	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1
+3	15916013	SNP-3.15914659.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/1	./.	0/0	1/1	./.	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/1	./.	0/1	0/1	0/0	1/1	0/1	1/1	0/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	15917390	SNP-3.15916036.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	15917486	SNP-3.15916132.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	0/1	0/0	0/1	0/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/1	0/0	1/1	0/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/1	0/0	0/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	1/1	0/0
+3	15917567	SNP-3.15916213.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/1	0/0	1/1	1/1	0/1	0/1	1/1	0/1	0/0	0/1	0/0	0/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/1	1/1	0/0	0/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/1	0/0	0/0	0/1	0/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/1	0/0	./.	0/0
+3	15917764	SNP-3.15916410.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0
+3	15919165	SNP-3.15917811.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	0/0	0/0	1/1	1/1	0/1	./.	1/1	0/0	0/0	1/1	0/1	0/0	./.	1/1	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/1	0/1	0/0	0/1	0/0	1/1	1/1	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/1	0/0	./.	1/1	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	./.	1/1	./.	0/1	0/0	0/0	0/1	1/1	0/0	0/1	1/1	0/1	0/1	1/1	./.	0/1	0/1	0/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	./.	1/1	./.	0/0	./.	0/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	./.	1/1	0/0
+3	15919943	SNP-3.15918589.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/1	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/1	./.	1/1	./.	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0
+3	15921499	SNP-3.15920145.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1
+3	15922395	SNP-3.15921041.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	./.	./.	./.	1/1	0/0	./.	0/0	1/1	1/1	./.	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	./.	1/1	0/1	./.	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/1	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	./.	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0
+3	15922480	SNP-3.15921126.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	./.	0/1	./.	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	./.	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	./.	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0
+3	15923846	SNP-3.15922492.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15923992	SNP-3.15922638.	A	G	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||621|c.*621T>C|330|LOC_Os03g27770|protein_coding|CODING|LOC_Os03g27770.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	15927697	SNP-3.15926343.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	15929137	SNP-3.15927783.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/1	1/1	1/1	./.	0/0	0/1	0/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/1	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1
+3	15929691	SNP-3.15928337.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	./.	./.	1/1	./.	0/0	./.	0/0	0/0	0/0	./.	0/1	1/1	1/1	./.	0/0	0/0	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/1	./.	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/1	0/0	0/0	0/0	./.	./.	./.	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/1	./.	0/1	./.	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	1/1	0/1	1/1	./.	./.	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0
+3	15930366	SNP-3.15929012.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	./.	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	./.	./.	0/0	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	./.	./.	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	./.	./.	0/0	./.	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	./.	./.	./.	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	15931727	SNP-3.15930373.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	1/1	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	15931993	SNP-3.15930639.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	0/1	0/1	./.	1/1	0/1	./.	1/1	1/1	0/1	0/1	1/1	1/1	0/1	0/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/1	0/1	0/0	0/0	0/0	1/1	./.	0/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	./.	./.	0/1	1/1	./.	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.
+3	15934316	SNP-3.15932962.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.413-22C>A|444|LOC_Os03g27780|protein_coding|CODING|LOC_Os03g27780.1|2|1),intron_variant(MODIFIER|||c.413-22C>A|439|LOC_Os03g27780|protein_coding|CODING|LOC_Os03g27780.2|2|1)	GT	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15937104	SNP-3.15935750.	C	A	.	.	PR;EFF=splice_region_variant(LOW|||c.439G>T|155|LOC_Os03g27790|protein_coding|CODING|LOC_Os03g27790.1|2|1),intron_variant(MODIFIER|||c.438+5G>T|155|LOC_Os03g27790|protein_coding|CODING|LOC_Os03g27790.1|2|1)	GT	0/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0
+3	15940139	SNP-3.15938785.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Cct/Tct|p.Pro544Ser/c.1630G>T|776|LOC_Os03g27800|protein_coding|CODING|LOC_Os03g27800.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	./.	./.	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15941372	SNP-3.15940018.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.522+100T>C|776|LOC_Os03g27800|protein_coding|CODING|LOC_Os03g27800.1|2|1)	GT	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0
+3	15943543	SNP-3.15942189.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/1	0/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15943766	SNP-3.15942412.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	./.	./.	./.	1/1	./.	./.	0/0	1/1	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	0/1	./.	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	1/1	./.	./.	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	./.	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	./.	./.	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	./.	0/0	./.	0/0	0/0	./.	./.	1/1	0/0	0/0	./.	./.	0/0	0/0	1/1	./.	1/1	0/0	./.	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0
+3	15944709	SNP-3.15943355.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15945019	SNP-3.15943665.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15945110	SNP-3.15943756.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/1	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	./.	1/1	1/1	./.	0/0	./.	./.	1/1	1/1	./.	0/0	./.	0/1	./.	1/1	./.	./.	./.	0/0	./.	./.	0/0	./.	1/1	0/1	0/0	0/0	0/0	./.	./.	0/0	0/1	1/1	./.	0/0	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	./.	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	1/1	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/1	1/1	0/0	1/1	./.	./.	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1
+3	15946086	SNP-3.15944732.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15947339	SNP-3.15945985.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/1	0/1	1/1	0/0	0/1	./.	0/0	0/0	0/1	0/0	0/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/1	./.	0/1	0/1	0/0	0/0	0/0	0/1	./.	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	./.	./.	./.	0/0	./.	0/0	0/0	0/1	0/0	0/1	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/1	./.	1/1	0/0	0/0	0/0	1/1	0/1	1/1	0/1	1/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	./.	./.	0/1	0/1	0/1	./.	0/0	0/0	0/0	1/1	0/0	0/1	./.	0/0	1/1	0/0	0/0	./.	0/1	0/1	0/0	0/0	./.	1/1	0/0	0/0	0/1	./.	0/0	0/1	0/0	./.	1/1	1/1	./.	0/1	1/1	1/1	1/1	./.	0/0	1/1	0/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	./.	1/1	0/0	./.	1/1	0/0	0/0	1/1	0/0
+3	15947702	SNP-3.15946348.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	15947731	SNP-3.15946377.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	15948026	SNP-3.15946672.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/0	./.	0/0	0/0	0/1	0/0
+3	15950880	SNP-3.15949526.	C	A	.	.	PR;EFF=stop_gained(HIGH|NONSENSE|tTa/tAa|p.Leu190*/c.569C>A|193|LOC_Os03g27810|protein_coding|CODING|LOC_Os03g27810.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	./.	0/0	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	./.	./.	0/0	1/1	0/0	1/1	0/0	./.	./.	./.	0/0	./.	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	15953451	SNP-3.15952097.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0
+3	15954887	SNP-3.15953533.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	./.	0/1	0/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	./.	0/0	0/0	1/1	0/1	1/1	0/1	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	./.	1/1	./.	0/0	1/1	./.	0/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	./.	./.	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/0	1/1	1/1	0/0	0/0
+3	15955221	SNP-3.15953867.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	1/1	0/0	./.	./.	1/1	./.	0/0	1/1	0/0	0/0	./.	1/1	./.	1/1	./.	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	./.	./.	0/0	0/0	./.	0/0	./.	./.	./.	0/0	1/1	./.	0/0	1/1	./.	./.	./.	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	1/1	1/1	./.	./.	./.	1/1	./.	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	./.	./.	./.	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.
+3	15956001	SNP-3.15954647.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	0/1	0/0	0/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/1	1/1	0/1	0/1	0/1	0/1	./.	1/1	0/1	./.	./.	./.	./.	0/1	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	0/1	./.	./.	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	./.	./.	0/0	1/1	./.	0/0	0/0	1/1	./.	0/1	0/0	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/1	0/0	0/0	./.	0/0	0/0	./.	0/0
+3	15962868	SNP-3.15961514.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.445-503A>G|778|LOC_Os03g27820|protein_coding|CODING|LOC_Os03g27820.1|3|1)	GT	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	1/1	0/0	1/1	./.	./.	0/0	./.	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	./.	./.	./.	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	./.	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0
+3	15963726	SNP-3.15962372.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Cat/Aat|p.His242Asn/c.724C>A|778|LOC_Os03g27820|protein_coding|CODING|LOC_Os03g27820.1|5|1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15964296	SNP-3.15962942.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gTt/gAt|p.Val403Asp/c.1208C>A|778|LOC_Os03g27820|protein_coding|CODING|LOC_Os03g27820.1|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	./.	0/0	0/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	0/1	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15964532	SNP-3.15963178.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Tct/Act|p.Ser482Thr/c.1444C>A|778|LOC_Os03g27820|protein_coding|CODING|LOC_Os03g27820.1|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15966855	SNP-3.15965501.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	1/1	0/0	./.	1/1	0/0	0/0
+3	15968302	SNP-3.15966948.	A	G	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||685|c.*685T>C|272|LOC_Os03g27830|protein_coding|CODING|LOC_Os03g27830.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	15968647	SNP-3.15967293.	A	G	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||340|c.*340T>C|272|LOC_Os03g27830|protein_coding|CODING|LOC_Os03g27830.1|1|1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/0	0/0
+3	15968918	SNP-3.15967564.	A	G	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||69|c.*69T>C|272|LOC_Os03g27830|protein_coding|CODING|LOC_Os03g27830.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/0	0/1	1/1	1/1	./.	0/1	0/0	0/1	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	0/1	0/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/1	0/1	./.	0/0	0/0	0/0	0/0	0/1	0/0	./.	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1
+3	15969236	SNP-3.15967882.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ctG/ctC|p.Leu190Leu/c.570T>C|272|LOC_Os03g27830|protein_coding|CODING|LOC_Os03g27830.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	./.	1/1	./.	0/0	./.	0/0	0/0	0/1	./.	0/1	./.	./.	./.	./.	./.	0/1	./.	./.	0/1	0/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/1	1/1	./.	0/1	./.	./.	./.	0/1	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	1/1	0/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	0/1	1/1	1/1	./.	0/0	./.	0/0	0/0	./.	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/1	1/1	./.	./.	./.	0/1	0/1	1/1	1/1	0/0	1/1	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	1/1	0/0	./.	0/1	0/0	0/0
+3	15970345	SNP-3.15968991.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	./.	1/1	0/0	./.	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15970854	SNP-3.15969500.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/1	1/1	1/1	0/0	0/0
+3	15971326	SNP-3.15969972.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/1	0/1	0/0	0/1	0/0	./.	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	15972105	SNP-3.15970751.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/1	1/1	0/1	1/1	./.	./.	./.	0/0	1/1	0/1	0/0	./.	0/1	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	0/1	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	1/1
+3	15974601	SNP-3.15973247.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/1	0/1	0/0	0/1	0/1	0/1	1/1	0/1	0/1	1/1	./.	1/1	./.	1/1	0/0	./.	0/0	1/1	0/0	0/1	0/0	0/1	0/0	0/1	0/0	1/1	0/0	0/1	0/0	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/1	0/0	1/1	0/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	15976989	SNP-3.15975635.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0
+3	15977444	SNP-3.15976090.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0
+3	15978213	SNP-3.15976859.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15979612	SNP-3.15978258.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	1/1	1/1	0/0	0/0
+3	15979735	SNP-3.15978381.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	./.	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/1	0/0	0/0
+3	15980358	SNP-3.15979004.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	./.	0/0	./.	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	1/1	./.	./.	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	1/1
+3	15981578	SNP-3.15980224.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/1	0/0	./.	0/0	1/1	0/0	0/1	0/1	1/1	0/0	0/0	0/0	1/1	0/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15983192	SNP-3.15981838.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	0/0	./.	1/1	0/0	./.	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/1	0/1	0/0	0/0	./.	0/0	./.	0/0	./.	1/1	./.	0/0	0/0	0/0	./.	0/1	0/0	0/0	./.	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/1	./.	1/1	./.	0/0	1/1	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	./.	0/0	0/0	./.	1/1	./.	0/0	./.	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/1	./.	0/0	0/0	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0
+3	15985025	SNP-3.15983671.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	1/1	./.	0/0	0/0	0/1	./.	./.	1/1	0/1	1/1	0/1	0/0	0/0	0/0	./.	0/1	./.	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	./.	./.	0/1	0/0	0/0	0/0	1/1	./.	0/0	1/1	1/1	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	./.	1/1	./.	1/1	0/1	1/1	0/1	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	./.	0/0	0/1	./.	0/0	0/0	0/1	1/1	./.	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	1/1	./.	./.	./.	1/1	0/0	0/0	./.	0/0	1/1	1/1	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	./.	0/0	1/1
+3	15988366	SNP-3.15987012.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.386-66C>A|531|LOC_Os03g27840|protein_coding|CODING|LOC_Os03g27840.1|3|1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	./.	1/1	0/0	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0
+3	15989426	SNP-3.15988072.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.462-722C>A|531|LOC_Os03g27840|protein_coding|CODING|LOC_Os03g27840.1|4|1)	GT	./.	0/1	0/0	0/0	1/1	0/0	0/1	1/1	0/1	0/0	./.	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	0/1	0/0	0/1	0/1	0/1	0/1	./.	./.	1/1	1/1	1/1	0/1	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/1	0/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	./.	./.	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	15990244	SNP-3.15988890.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|aaG/aaA|p.Lys186Lys/c.558C>A|531|LOC_Os03g27840|protein_coding|CODING|LOC_Os03g27840.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	./.	0/0	0/0	1/1	0/0	./.	1/1	1/1	./.	0/0	0/0	./.	./.	./.	1/1	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	./.	./.	1/1	0/0	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	0/0	./.	./.	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	./.	./.	0/0	0/0	0/0	1/1	0/0
+3	15991434	SNP-3.15990080.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|gaG/gaA|p.Glu396Glu/c.1188C>A|531|LOC_Os03g27840|protein_coding|CODING|LOC_Os03g27840.1|9|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0
+3	15997983	SNP-3.15996629.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0
+3	15998144	SNP-3.15996790.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	1/1	./.	0/0	./.	0/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	./.	0/0	0/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	./.	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/1	./.	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	./.	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	0/1	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/1	0/1	0/1	0/0	./.	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/1	1/1	0/1	0/0
+3	16000772	SNP-3.15999418.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/1	0/0	./.	0/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	./.	0/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/1	1/1	./.	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	./.	1/1	1/1	1/1	0/1	0/1	1/1	0/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/1	./.	./.	1/1	0/0	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0
+3	16001391	SNP-3.16000037.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	./.	1/1	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	./.	0/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/1	./.	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/1	./.	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	1/1	0/0	1/1	0/0	1/1	./.	./.	./.	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	16001554	SNP-3.16000200.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0
+3	16012630	SNP-3.16011276.	A	G	.	.	PR;EFF=splice_region_variant(LOW|||c.478T>C|899|LOC_Os03g27870|protein_coding|CODING|LOC_Os03g27870.1|6|1),intron_variant(MODIFIER|||c.478-3T>C|899|LOC_Os03g27870|protein_coding|CODING|LOC_Os03g27870.1|6|1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	./.	0/0	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	./.	./.	./.	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	./.	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	./.	0/0	0/0	1/1	./.	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	./.	./.	./.	0/0	./.	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0
+3	16012660	SNP-3.16011306.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.478-33G>T|899|LOC_Os03g27870|protein_coding|CODING|LOC_Os03g27870.1|6|1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	16019024	SNP-3.16017670.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	1/1	./.	./.	./.	1/1	1/1	0/0	./.	1/1	1/1	./.	./.	./.	./.	1/1	./.	1/1	0/0	0/1	0/1	./.	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	1/1	1/1	./.	./.	0/0	./.	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.	./.	1/1	0/0	0/0
+3	16019413	SNP-3.16018059.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	./.	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/1	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	./.	0/0	0/0	0/1	0/0
+3	16020114	SNP-3.16018760.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.214+211A>G|148|LOC_Os03g27890|protein_coding|CODING|LOC_Os03g27890.1|1|1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	0/0	./.	./.	./.	0/0	1/1	0/0	1/1	./.	./.	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	1/1	0/0	./.	./.	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	./.	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	1/1	1/1	0/0	0/0
+3	16021654	SNP-3.16020300.	A	G	.	.	PR;EFF=synonymous_variant(LOW||Gac/Gac|p.Asp86Asp/c.256A>G|148|LOC_Os03g27890|protein_coding|CODING|LOC_Os03g27890.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	0/0	1/1	0/0	1/1	1/1	./.	./.	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0	1/1	./.	./.	0/0	0/0	1/1	0/1	0/0	0/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1
+3	16022203	SNP-3.16020849.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	1/1	./.	0/0	1/1	./.	./.	1/1	0/0	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	./.	./.	./.	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	./.	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	1/1	./.	1/1	./.	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	1/1	./.
+3	16023464	SNP-3.16022110.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	./.	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	./.	./.	0/0	./.	0/0	./.	1/1	./.	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	./.	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	1/1	./.	1/1	./.	./.	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	./.	0/0	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	./.	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	1/1	1/1	./.	1/1	./.	./.	0/0	./.	1/1	./.	1/1	0/0	./.	0/0	./.	1/1	0/0	0/0	./.	0/0
+3	16026232	SNP-3.16024878.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/1	0/0	0/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0
+3	16030064	SNP-3.16028710.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|tcC/tcG|p.Ser1031Ser/c.3093A>G|1326|LOC_Os03g27910|protein_coding|CODING|LOC_Os03g27910.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/1	0/0	./.	0/0	./.	0/1	0/0	./.	1/1	0/0	0/1	1/1	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/1	1/1	0/0	0/0	0/1	1/1	./.	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/1	0/0	./.	0/0	0/1	0/0	./.	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0
+3	16031042	SNP-3.16029688.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.3461-171A>G|1326|LOC_Os03g27910|protein_coding|CODING|LOC_Os03g27910.1|5|1)	GT	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/1	0/0	1/1	1/1	./.	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1
+3	16031456	SNP-3.16030102.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.3618+86A>G|1326|LOC_Os03g27910|protein_coding|CODING|LOC_Os03g27910.1|6|1)	GT	1/1	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	./.	0/0	1/1	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1
+3	16034617	SNP-3.16033263.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/1	./.	0/1	./.	1/1	./.	1/1	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	./.	./.	0/0	./.	0/0	./.	./.	0/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	./.	1/1	1/1	./.	./.	0/1	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	1/1	1/1	0/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1	./.	./.	0/0
+3	16035032	SNP-3.16033678.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	0/0	1/1	0/0	./.	0/0	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	1/1	0/0	1/1	./.	./.	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	./.	1/1	1/1	0/0	./.	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	./.	./.	./.	./.	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	1/1	0/0	./.	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	./.	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	./.	./.	./.	1/1	./.	1/1	./.	0/0	0/0	./.	1/1	./.	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	./.	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/0	1/1	./.	./.	0/0
+3	16038010	SNP-3.16036656.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0
+3	16039908	SNP-3.16038554.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.150+456C>A|690|LOC_Os03g27930|protein_coding|CODING|LOC_Os03g27930.1|2|1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	16040124	SNP-3.16038770.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.150+672A>G|690|LOC_Os03g27930|protein_coding|CODING|LOC_Os03g27930.1|2|1)	GT	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	0/1	0/0
+3	16041706	SNP-3.16040352.	C	A	.	.	PR;EFF=synonymous_variant(LOW||Aaa/Aaa|p.Lys232Lys/c.694C>A|690|LOC_Os03g27930|protein_coding|CODING|LOC_Os03g27930.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	16041891	SNP-3.16040537.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|tcT/tcG|p.Ser293Ser/c.879A>G|690|LOC_Os03g27930|protein_coding|CODING|LOC_Os03g27930.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1
+3	16043518	SNP-3.16042164.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ccC/ccA|p.Pro543Pro/c.1629C>A|690|LOC_Os03g27930|protein_coding|CODING|LOC_Os03g27930.1|9|1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	./.	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	16044322	SNP-3.16042968.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.1732-168A>G|690|LOC_Os03g27930|protein_coding|CODING|LOC_Os03g27930.1|9|1)	GT	1/1	./.	1/1	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/1	0/1	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	0/0	1/1	0/1	1/1	0/0	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1
+3	16046247	SNP-3.16044893.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/1	0/1	./.	0/0	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1
+3	16049910	SNP-3.16048556.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	./.	1/1	0/1	0/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0
+3	16051156	SNP-3.16049802.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	16052453	SNP-3.16051099.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.272+128A>G|498|LOC_Os03g27950|protein_coding|CODING|LOC_Os03g27950.2|3|1),intron_variant(MODIFIER|||c.365+35A>G|529|LOC_Os03g27950|protein_coding|CODING|LOC_Os03g27950.1|3|1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	./.	1/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0
+3	16052936	SNP-3.16051582.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.272+611A>G|498|LOC_Os03g27950|protein_coding|CODING|LOC_Os03g27950.2|3|1),intron_variant(MODIFIER|||c.365+518A>G|529|LOC_Os03g27950|protein_coding|CODING|LOC_Os03g27950.1|3|1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	0/0	1/1	1/1	1/1	0/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/1	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0
+3	16053713	SNP-3.16052359.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.273-744A>G|498|LOC_Os03g27950|protein_coding|CODING|LOC_Os03g27950.2|3|1),intron_variant(MODIFIER|||c.366-744A>G|529|LOC_Os03g27950|protein_coding|CODING|LOC_Os03g27950.1|3|1)	GT	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	./.	0/1	1/1	0/1	0/0	0/0	./.	0/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/1	./.	0/0	0/1	0/0	./.	0/0	1/1	1/1	0/0	1/1	0/1	0/1	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0
+3	16054009	SNP-3.16052655.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.273-448A>G|498|LOC_Os03g27950|protein_coding|CODING|LOC_Os03g27950.2|3|1),intron_variant(MODIFIER|||c.366-448A>G|529|LOC_Os03g27950|protein_coding|CODING|LOC_Os03g27950.1|3|1)	GT	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/1	1/1	0/0	0/0	./.	0/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1
+3	16056312	SNP-3.16054958.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.794+91C>A|529|LOC_Os03g27950|protein_coding|CODING|LOC_Os03g27950.1|8|1),intron_variant(MODIFIER|||c.701+91C>A|498|LOC_Os03g27950|protein_coding|CODING|LOC_Os03g27950.2|8|1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	16057891	SNP-3.16056537.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Ctt/Gtt|p.Leu521Val/c.1561A>G|529|LOC_Os03g27950|protein_coding|CODING|LOC_Os03g27950.1|13|1|WARNING_REF_DOES_NOT_MATCH_GENOME),missense_variant(MODERATE|MISSENSE|Ctt/Gtt|p.Leu490Val/c.1468A>G|498|LOC_Os03g27950|protein_coding|CODING|LOC_Os03g27950.2|13|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1
+3	16058615	SNP-3.16057261.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1
+3	16059332	SNP-3.16057978.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0
+3	16059864	SNP-3.16058510.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1
+3	16070188	SNP-3.16068834.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	16072044	SNP-3.16070690.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cGc/cAc|p.Arg347His/c.1040C>A|492|LOC_Os03g27980|protein_coding|CODING|LOC_Os03g27980.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/1	./.	0/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/1	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	./.	0/1	./.	0/0	./.	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0
+3	16074898	SNP-3.16073544.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.1423-152T>C|753|LOC_Os03g27990|protein_coding|CODING|LOC_Os03g27990.1|11|1)	GT	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/1	0/0	1/1	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	1/1
+3	16075626	SNP-3.16074272.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cAt/cTt|p.His354Leu/c.1061G>T|753|LOC_Os03g27990|protein_coding|CODING|LOC_Os03g27990.1|10|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	16075691	SNP-3.16074337.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|tcT/tcC|p.Ser332Ser/c.996T>C|753|LOC_Os03g27990|protein_coding|CODING|LOC_Os03g27990.1|10|1)	GT	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	16076230	SNP-3.16074876.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|gaT/gaC|p.Asp244Asp/c.732T>C|753|LOC_Os03g27990|protein_coding|CODING|LOC_Os03g27990.1|9|1)	GT	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1
+3	16076306	SNP-3.16074952.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.693-37G>T|753|LOC_Os03g27990|protein_coding|CODING|LOC_Os03g27990.1|8|1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	./.	./.	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/1	1/1	0/0	0/0	./.	./.	0/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	./.	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	16078859	SNP-3.16077505.	A	G	.	.	PR;EFF=5_prime_UTR_variant(MODIFIER||216|c.-216T>C|753|LOC_Os03g27990|protein_coding|CODING|LOC_Os03g27990.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/1	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	./.	./.	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1
+3	16080275	SNP-3.16078921.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	./.	./.	./.	./.	./.	0/0	./.	0/1	1/1	./.	./.	./.	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	./.	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	./.	0/0
+3	16081791	SNP-3.16080437.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/1	0/1	0/1	0/1	1/1	1/1	0/1	0/1	0/1	0/1	0/0	0/1	0/1	0/1	./.	0/1	0/1	./.	0/1	0/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/1	0/1	0/0	0/0	0/1	0/1	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/1	0/1	0/0	0/1	0/1	0/1	0/1	0/1	0/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/1	0/0	0/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/1	0/0	0/1	0/1	0/1	0/0	./.	0/1	0/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/1	0/0	0/0	1/1	0/0
+3	16081893	SNP-3.16080539.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	0/0	0/1	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/1	0/0	1/1	0/0	./.	0/0	0/1	0/0	./.	./.	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/1	./.	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	16082458	SNP-3.16081104.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1
+3	16084305	SNP-3.16082951.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	./.	./.	./.	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	./.	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	./.	./.	1/1	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	./.	./.	./.	1/1	./.	1/1	1/1	./.	1/1	0/0	./.	./.	./.	./.	./.	./.	./.	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	./.	./.	./.	./.	1/1	0/0	0/0	0/0	./.	0/0	./.	./.	./.	0/0	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	./.	1/1	1/1	1/1	0/0	./.	0/0	0/0	./.	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	./.	1/1	./.	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	./.	0/0	./.	./.	0/0	./.	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	1/1	0/0	./.	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0
+3	16085089	SNP-3.16083735.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/1	0/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	16085268	SNP-3.16083914.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	0/1	1/1	1/1	0/0	0/0	0/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	./.	./.	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/1	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	1/1	0/0	1/1	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	16085337	SNP-3.16083983.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/1	1/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	0/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	0/1	0/1	1/1	0/0	0/0	0/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1
+3	16086121	SNP-3.16084767.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	0/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/1	1/1
+3	16087398	SNP-3.16086044.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	1/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	./.	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	./.	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	0/0	./.	1/1	0/0	1/1	1/1	1/1	./.	0/0	./.	1/1	./.	0/0	1/1	./.	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	./.	./.	./.	0/0	0/0	./.	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	./.	1/1
+3	16088494	SNP-3.16087140.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/1	0/0	./.	0/1	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/1	1/1
+3	16092466	SNP-3.16091112.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	./.	./.	0/0	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	./.	1/1	0/0	./.	1/1	./.	0/0	./.	./.	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0
+3	16097968	SNP-3.16096614.	A	G	.	.	PR;EFF=stop_gained(HIGH|NONSENSE|taC/taG|p.Tyr742*/c.2226A>G|1975|LOC_Os03g28010|protein_coding|CODING|LOC_Os03g28010.1|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME);LOF=(LOC_Os03g28010|LOC_Os03g28010|1|1.00);NMD=(LOC_Os03g28010|LOC_Os03g28010|1|1.00)	GT	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	./.	./.	./.	./.	0/0	./.	./.	0/0	./.	./.	0/0	./.	./.	./.	./.	./.	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	./.	./.	1/1	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	./.	./.	./.	./.	./.	./.	0/0	./.	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	./.	./.	./.	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	./.	./.	./.	./.	0/0	0/0	1/1	0/0	./.	0/0	./.	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	1/1
+3	16099002	SNP-3.16097648.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|ttC/ttG|p.Phe987Leu/c.2961A>G|1975|LOC_Os03g28010|protein_coding|CODING|LOC_Os03g28010.1|8|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	0/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/1	0/0	0/1	./.	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	./.	1/1	0/1	0/0	0/0	1/1	1/1	0/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/1	./.	1/1	0/0	1/1	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	1/1	0/1	1/1	0/0	0/0	1/1
+3	16100900	SNP-3.16099546.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.3907-279C>A|1975|LOC_Os03g28010|protein_coding|CODING|LOC_Os03g28010.1|10|1)	GT	0/0	1/1	0/0	./.	1/1	0/0	1/1	./.	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	./.	0/0	./.	./.	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	1/1	0/0	1/1	./.	0/0	1/1	0/0	./.	0/0	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	./.	0/0	1/1	./.	./.	./.	1/1	0/0	./.	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	1/1	0/0	0/0	./.	1/1	0/0	./.	0/0	./.	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	0/0	./.	0/0	./.	0/0	./.	./.	0/0	0/0	1/1	0/0
+3	16102230	SNP-3.16100876.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gTt/gGt|p.Val1653Gly/c.4958A>G|1975|LOC_Os03g28010|protein_coding|CODING|LOC_Os03g28010.1|11|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	./.	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	./.	0/1	./.	0/0	0/1	1/1	0/0	1/1	0/0	0/1	0/0	./.	0/0	1/1	0/1	./.	0/0	0/1	./.	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1
+3	16109853	SNP-3.16108499.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	1/1	0/0	0/1	1/1	0/1	1/1	1/1	./.	0/0	0/1	0/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	0/1	0/0	0/0	0/0	./.	0/1	1/1	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/1	0/1	0/0	0/1	0/0	0/1	0/0	0/0	0/1	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/1	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/1	1/1	0/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	16110799	SNP-3.16109445.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	./.	./.	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	./.	1/1	./.	./.	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	./.	./.	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	./.	1/1	./.	0/0	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0
+3	16111699	SNP-3.16110345.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	./.	./.	1/1	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	./.	0/0	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/1	./.	0/0	1/1
+3	16112054	SNP-3.16110700.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	0/1	0/0	1/1	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/1	./.	0/1	0/1	./.	1/1	./.	1/1	1/1	0/1	0/0	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	./.	0/0	0/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	./.	0/1	0/0	./.	0/1	0/0	0/0	0/0
+3	16115076	SNP-3.16113722.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gGc/gCc|p.Gly33Ala/c.98T>C|155|LOC_Os03g28030|protein_coding|CODING|LOC_Os03g28030.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	1/1	1/1	0/0	0/0	./.	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	./.	./.	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	1/1	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	1/1	0/0	1/1
+3	16116032	SNP-3.16114678.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	./.	./.	0/0	0/0	0/0	1/1	1/1	./.	./.	1/1	./.	0/0	./.	0/0	./.	1/1	./.	0/0	1/1	1/1	./.	./.	1/1	0/0	1/1	1/1	./.	./.	./.	1/1	./.	1/1	./.	1/1	./.	./.	./.	1/1	./.	0/0	./.	./.	./.	1/1	./.	./.	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	./.	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	1/1	./.	1/1	./.	1/1	./.	1/1	./.	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	./.	./.	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	./.	0/0	./.	1/1	1/1	./.	./.	./.	./.	./.	./.	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	1/1	./.	1/1	1/1	0/0	./.
+3	16116761	SNP-3.16115407.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	1/1	./.	1/1	1/1	./.	./.	0/0	./.	0/0	./.	0/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/1	0/1	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/1	1/1	0/1	0/0	0/0	0/1	1/1	0/1	0/0	0/0	./.	./.	0/0	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/1	0/1	0/0	0/0
+3	16117174	SNP-3.16115820.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	1/1	0/0	1/1	./.	0/0	1/1	./.	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	./.	./.	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	./.	1/1	1/1	0/0	./.	./.	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	./.	0/0	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	./.	./.	0/0	./.	0/0	0/0	0/0
+3	16118924	SNP-3.16117570.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0
+3	16121614	SNP-3.16120260.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/1	./.	0/0	./.	./.	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/1	0/0	1/1	0/0	./.	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	16123637	SNP-3.16122283.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	./.	./.	./.	./.	0/0	./.	0/0	0/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	./.	0/0	1/1	0/0	1/1	./.	./.	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/1	./.	0/0	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	0/0	0/0	1/1	./.	./.	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1
+3	16124670	SNP-3.16123316.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	./.	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	1/1	0/1	0/1	./.	./.	./.	0/1	0/0	1/1	0/1	1/1	0/1	1/1	./.	1/1	1/1	0/1	./.	1/1	0/0	1/1	1/1	0/0	1/1	0/1	0/1	0/0	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	./.	0/0	0/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1
+3	16126350	SNP-3.16124996.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	./.	0/0	./.	./.	./.	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/1	0/1	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	16127787	SNP-3.16126433.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/1	0/0	0/1	0/0	0/0	0/1	0/0	0/0	1/1	1/1	0/1	1/1	0/1	0/1	0/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/1	0/1	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	16128346	SNP-3.16126992.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	0/0	./.	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	./.	0/0	./.	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0
+3	16131077	SNP-3.16129723.	A	G	.	.	PR;EFF=synonymous_variant(LOW||Gct/Gct|p.Ala163Ala/c.487A>G|764|LOC_Os03g28060|protein_coding|CODING|LOC_Os03g28060.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0
+3	16132391	SNP-3.16131037.	A	G	.	.	PR;EFF=synonymous_variant(LOW||Gct/Gct|p.Ala491Ala/c.1471A>G|764|LOC_Os03g28060|protein_coding|CODING|LOC_Os03g28060.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	0/1	0/1	0/1	0/0	0/0	0/0	0/1	1/1	0/1	0/1	1/1	0/1	0/0	0/1	0/0	1/1	./.	./.	1/1	0/1	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	./.	1/1	./.	0/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/1	1/1	./.	0/0	0/1	0/1	1/1	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	./.	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0
+3	16133002	SNP-3.16131648.	A	G	.	.	PR;EFF=synonymous_variant(LOW||caG/caG|p.Gln667Gln/c.2001A>G|764|LOC_Os03g28060|protein_coding|CODING|LOC_Os03g28060.1|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0
+3	16135246	SNP-3.16133892.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1
+3	16135358	SNP-3.16134004.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1
+3	16139308	SNP-3.16137954.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	16140836	SNP-3.16139482.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	16142450	SNP-3.16141096.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/1	0/1	./.	0/0	0/0	0/0	0/1	0/1	0/1	0/1	./.	0/1	0/0	0/1	0/0	0/1	0/1	0/1	0/1	0/1	0/0	0/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/1	0/1	0/1	0/1	0/0	0/0	1/1	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/1	0/1	0/1	0/0	./.	0/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	1/1	0/1	0/1	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	1/1
+3	16142960	SNP-3.16141606.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	16146021	SNP-3.16144667.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	1/1	0/0	1/1	0/1	0/0	0/0	1/1	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/1	1/1	./.	1/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	./.	1/1	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	./.	1/1	0/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	16147747	SNP-3.16146393.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/1	1/1	0/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	0/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/1	0/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	16147908	SNP-3.16146554.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	0/1	./.	1/1	./.	0/0	1/1	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	1/1	./.	1/1	0/0	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/1	0/0	1/1	0/0	0/1	./.	1/1	./.	0/0	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	1/1	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0
+3	16149035	SNP-3.16147681.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	./.	1/1	0/1	1/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	./.	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/1	1/1	0/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	1/1	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0
+3	16150473	SNP-3.16149119.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/1	0/1	0/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0
+3	16155821	SNP-3.16154467.	A	G	.	.	PR;EFF=splice_donor_variant(HIGH|||c.60T>C|365|LOC_Os03g28100|protein_coding|CODING|LOC_Os03g28100.1|1|1),intron_variant(MODIFIER|||c.59+1T>C|365|LOC_Os03g28100|protein_coding|CODING|LOC_Os03g28100.1|1|1);LOF=(LOC_Os03g28100|LOC_Os03g28100|1|1.00)	GT	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	0/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/1	1/1	0/1	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/1	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1
+3	16156517	SNP-3.16155163.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/1	0/1	0/1	0/1	0/0	1/1	0/0	1/1	0/1	0/1	1/1	0/1	./.	1/1	./.	1/1	0/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/1	0/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	1/1
+3	16158960	SNP-3.16157606.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|cgT/cgC|p.Arg1273Arg/c.3819T>C|1303|LOC_Os03g28110|protein_coding|CODING|LOC_Os03g28110.1|4|1)	GT	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	./.	0/0	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	./.	0/0	./.	./.	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	./.	1/1	0/0	1/1	./.	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0
+3	16158961	SNP-3.16157607.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cGt/cCt|p.Arg1273Pro/c.3818T>C|1303|LOC_Os03g28110|protein_coding|CODING|LOC_Os03g28110.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/1	./.	1/1	./.	0/1	0/0	0/0	0/0	1/1	0/0	./.	0/1	./.	1/1	0/0	./.	0/0	./.	0/1	0/1	./.	0/1	1/1	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	0/1	0/1	1/1	0/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	0/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	0/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/1	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/1	./.	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/1	1/1	./.	0/0	0/1	1/1	1/1	0/1	0/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/1	0/1	1/1	0/1	0/0	0/1	1/1	1/1	0/0	0/1	./.	0/1	0/0	0/0	1/1	0/1	1/1	0/1	0/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/1	./.	0/1	0/1	1/1	0/0	1/1
+3	16159744	SNP-3.16158390.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aAt/aTt|p.Asn1032Ile/c.3095G>T|1303|LOC_Os03g28110|protein_coding|CODING|LOC_Os03g28110.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	0/0	1/1	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	./.	0/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	16159923	SNP-3.16158569.	A	G	.	.	PR;EFF=synonymous_variant(LOW||gaC/gaC|p.Asp972Asp/c.2916T>C|1303|LOC_Os03g28110|protein_coding|CODING|LOC_Os03g28110.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1
+3	16163231	SNP-3.16161877.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/1	0/1	1/1	./.	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1
+3	16163777	SNP-3.16162423.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	0/0	./.	0/1	1/1	0/0	./.	1/1	0/0	1/1	./.	1/1	0/0	./.	./.	1/1	./.	1/1	0/0	0/0	./.	0/0	./.	./.	1/1	1/1	./.	./.	./.	0/1	0/0	./.	1/1	./.	./.	./.	./.	1/1	./.	./.	1/1	1/1	0/0	1/1	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	0/1	./.	0/0	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	./.	0/0	./.	1/1	1/1	0/0	0/1	1/1	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1
+3	16164237	SNP-3.16162883.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.234-11G>T|156|LOC_Os03g28120|protein_coding|CODING|LOC_Os03g28120.1|2|1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	1/1	0/0	./.	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	1/1	1/1	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	16167564	SNP-3.16166210.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	16167942	SNP-3.16166588.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	./.	0/1	1/1	0/1	1/1	0/1	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	1/1	0/1	1/1	0/1	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	./.	./.	1/1	./.	0/0	./.	./.	0/0	0/1	./.	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/1	1/1	0/0	./.	0/1	./.	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	./.	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	./.	0/1	0/0	0/0	0/0	./.	./.	0/1	./.	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/0	./.	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.
+3	16168255	SNP-3.16166901.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	./.	1/1	./.	1/1	0/0	./.	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	./.	./.	./.	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	./.	./.	0/0	1/1	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	./.	./.	1/1	0/0	1/1
+3	16169101	SNP-3.16167747.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	./.	1/1	0/0	./.	0/0	1/1	1/1	./.	0/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	1/1	./.	1/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	1/1
+3	16173019	SNP-3.16171665.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	1/1	./.	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	./.	0/0	./.	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	./.	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	./.	1/1	0/0	./.	./.	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	16173556	SNP-3.16172202.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	0/0	./.	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	./.	0/0	1/1	1/1	./.	0/1	0/0	./.	./.	./.	./.	0/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	./.	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	0/0	./.	./.	./.	./.	./.	./.	./.	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	1/1	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	16173793	SNP-3.16172439.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	./.	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/1	0/0	1/1	0/0	0/0	./.	0/0	./.	./.	./.	0/0	0/0	0/0	1/1	./.	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/1	0/1	./.	0/0	./.	1/1	./.	./.	1/1	1/1	0/1	1/1	1/1	./.	0/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/1	0/0	1/1	1/1	1/1	./.	1/1	0/1	./.	./.	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	./.	0/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0
+3	16175848	SNP-3.16174494.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	16177665	SNP-3.16176311.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	./.	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0
+3	16178411	SNP-3.16177057.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	./.	./.	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	./.	./.	./.	./.	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	./.	./.	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	./.	1/1	0/0	1/1	0/0	./.	0/0	0/0	1/1	./.	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	./.	1/1	./.
+3	16180766	SNP-3.16179412.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0
+3	16184927	SNP-3.16183573.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|gaC/gaT|p.Asp1583Asp/c.4749G>T|1818|LOC_Os03g28140|protein_coding|CODING|LOC_Os03g28140.1|9|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	16185673	SNP-3.16184319.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Gca/Cca|p.Ala1335Pro/c.4003T>C|1818|LOC_Os03g28140|protein_coding|CODING|LOC_Os03g28140.1|9|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1
+3	16186851	SNP-3.16185497.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.3408+265T>C|1818|LOC_Os03g28140|protein_coding|CODING|LOC_Os03g28140.1|8|1)	GT	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/1	./.	1/1	1/1	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	./.	1/1
+3	16188584	SNP-3.16187230.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cAt/cCt|p.His773Pro/c.2318T>C|1818|LOC_Os03g28140|protein_coding|CODING|LOC_Os03g28140.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0
+3	16190367	SNP-3.16189013.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ccG/ccT|p.Pro569Pro/c.1707G>T|1818|LOC_Os03g28140|protein_coding|CODING|LOC_Os03g28140.1|4|1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	16195500	SNP-3.16194146.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	16196752	SNP-3.16195398.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	0/0	1/1	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	0/0	./.	./.	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	1/1	./.	./.	./.	1/1	0/0	./.	1/1	./.	1/1	./.	1/1	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	1/1	0/0	1/1	./.	./.	0/1	1/1	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	0/0	./.	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	1/1	0/0
+3	16196939	SNP-3.16195585.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	./.	0/0	0/0	1/1	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	./.	./.	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	./.	0/0	1/1	./.	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	16197579	SNP-3.16196225.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	16197647	SNP-3.16196293.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	./.	1/1	1/1	0/0	0/1	1/1	0/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	./.	1/1	0/0	1/1	0/1	0/1	./.	./.	0/1	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/1	1/1	./.	0/0	0/1	./.	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0
+3	16199091	SNP-3.16197737.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1
+3	16202379	SNP-3.16201026.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0
+3	16202825	SNP-3.16201472.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	./.	./.	0/0	0/0	./.	./.	0/0	./.	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	./.	./.	0/0	./.	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	./.	./.	1/1	./.	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	./.	./.	1/1	./.	1/1	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	./.	1/1	./.	./.	./.	./.	./.	./.	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	./.	./.	./.	./.	./.	0/0	./.	./.	./.	1/1	1/1	0/0	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	./.	1/1	0/0	./.	./.	0/0	./.	0/0	./.	1/1	./.	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	0/0	./.	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	./.	./.	0/0	1/1	0/0	1/1	0/0	1/1	./.	0/0
+3	16203548	SNP-3.16202195.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	0/0	./.	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/1	./.	./.	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/1	0/0	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1
+3	16204694	SNP-3.16203341.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	./.	1/1	./.	1/1	./.	0/0	./.	./.	./.	1/1	1/1	0/0	./.	./.	./.	./.	0/0	./.	0/0	0/0	./.	./.	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	./.	1/1	./.	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	./.	./.	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	0/0	./.	./.	0/0	0/0	0/0	./.	1/1	0/0	./.	./.	./.	1/1	0/0	0/0	1/1	0/0	./.	./.	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	./.	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0
+3	16204817	SNP-3.16203464.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/1	0/0	./.	./.	0/0	./.	1/1	0/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	1/1	0/0	./.	./.	./.	0/0	0/1	1/1	./.	./.	0/0	0/1	./.	0/1	./.	0/1	1/1	./.	0/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/1	./.	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	./.	1/1	0/0	./.	./.	0/0	./.	0/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	16205976	SNP-3.16204623.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	./.	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	./.	1/1	0/1	0/0	0/0	0/0	0/1	0/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0
+3	16207401	SNP-3.16206048.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	0/0	./.	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	1/1	0/0	0/0	./.	0/0	./.	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	./.	./.	./.	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0
+3	16208608	SNP-3.16207255.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/1	0/1	0/0	0/0	0/1	0/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0
+3	16210681	SNP-3.16209328.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	16211192	SNP-3.16209839.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	16211757	SNP-3.16210404.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/1	0/0	0/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	./.	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	16212460	SNP-3.16211107.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/1	0/0	0/0	./.	0/0	0/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	16212633	SNP-3.16211280.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	./.	./.	0/0	./.	./.	0/0	./.	./.	0/0	./.	0/0	./.	./.	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	./.	1/1	1/1	1/1	./.	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/1	./.	1/1	1/1	./.	0/0	0/0	./.	./.	./.	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	./.	1/1	1/1	0/0	1/1
+3	16214847	SNP-3.16213494.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.209+12A>G|78|LOC_Os03g28170|protein_coding|CODING|LOC_Os03g28170.1|2|1)	GT	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	./.	./.	./.	0/0	./.	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1
+3	16216727	SNP-3.16215374.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	./.	./.	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1
+3	16216860	SNP-3.16215507.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	./.	1/1	0/0	1/1	1/1	./.	./.	./.	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	1/1	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	1/1
+3	16221494	SNP-3.16220141.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.216-181T>C|165|LOC_Os03g28180|protein_coding|CODING|LOC_Os03g28180.1|1|1)	GT	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/0	1/1	1/1	./.	0/0	1/1	1/1	0/1	0/0	./.	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/1	./.	0/0	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0
+3	16221513	SNP-3.16220160.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.216-200T>C|165|LOC_Os03g28180|protein_coding|CODING|LOC_Os03g28180.1|1|1)	GT	0/0	0/0	./.	./.	./.	1/1	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	./.	1/1	1/1	./.	0/0	1/1	1/1	./.	./.	1/1	./.	./.	0/1	0/0	0/0	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	1/1	./.	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	./.	./.	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	1/1	0/0	1/1	0/0	./.	./.	1/1	0/0	./.	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	./.	./.	./.	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	./.
+3	16222648	SNP-3.16221295.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0
+3	16225523	SNP-3.16224170.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0	1/1	0/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/1	1/1
+3	16227575	SNP-3.16226222.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	./.	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/1	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	1/1
+3	16228073	SNP-3.16226720.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Gcg/Ccg|p.Ala40Pro/c.118T>C|177|LOC_Os03g28190|protein_coding|CODING|LOC_Os03g28190.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	./.	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	1/1
+3	16241227	SNP-3.16239874.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|acA/acT|p.Thr115Thr/c.345G>T|293|LOC_Os03g28230|protein_coding|CODING|LOC_Os03g28230.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	./.	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1	0/0	./.	0/0	1/1	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	1/1	0/0	./.	./.	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	16244812	SNP-3.16243459.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/1	1/1	0/0	1/1	./.	0/1	1/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	16246646	SNP-3.16245293.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	./.	./.	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	1/1	0/0	./.	0/0	./.	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	1/1	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0
+3	16248317	SNP-3.16246964.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	./.	0/0	./.	0/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/1	0/0	./.	1/1	0/0	1/1	1/1	0/1	./.	./.	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/1	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/1	0/0	0/0	0/0	1/1
+3	16248339	SNP-3.16246986.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	./.	./.	1/1	0/0	1/1	./.	./.	./.	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1
+3	16249091	SNP-3.16247738.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	1/1	1/1	0/0	0/1	0/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1
+3	16249376	SNP-3.16248023.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	./.	./.	./.	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	1/1	./.	1/1	./.	0/0	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	./.	./.	./.	./.	1/1	./.	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	1/1	./.	./.	0/0	1/1	./.	1/1	0/0	./.	1/1	1/1	./.	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0
+3	16249805	SNP-3.16248452.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	0/0	1/1	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	./.	./.	./.	0/0	./.	1/1	./.	0/0	1/1	./.	1/1	0/0	1/1	./.	1/1	0/0	0/0	1/1	0/0	./.	0/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	0/0	./.	1/1	0/0	./.	1/1	1/1	0/0	0/0	./.	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	./.	0/0	1/1	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/1	./.	1/1	0/1	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0
+3	16249928	SNP-3.16248575.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	./.	./.	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	16250175	SNP-3.16248822.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/1	./.	0/0	1/1	0/0	0/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.
+3	16250281	SNP-3.16248928.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	./.	0/0	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	0/0	./.	./.	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	./.	0/0	0/0	./.	1/1	1/1	./.	0/0	./.	0/0	./.	./.	./.	0/0	0/0	0/0	1/1	1/1	./.	./.	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	./.	./.	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	./.	1/1	1/1	./.	./.	1/1	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	./.	./.	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	1/1	./.	1/1	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	1/1	1/1	./.	./.	0/0	./.	0/0	./.	./.	0/0	./.	./.	0/0
+3	16251439	SNP-3.16250086.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.196-443T>C|145|LOC_Os03g28260|protein_coding|CODING|LOC_Os03g28260.1|1|1)	GT	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/0	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	./.	0/1	0/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/1	0/0
+3	16252381	SNP-3.16251028.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.195+142G>T|145|LOC_Os03g28260|protein_coding|CODING|LOC_Os03g28260.1|1|1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/1	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/1	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	16253135	SNP-3.16251782.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/0	./.	./.	./.	1/1	./.	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	1/1	0/0	./.	1/1	./.	0/0	0/0	1/1	0/0	./.	./.	1/1	./.	./.	1/1	1/1	./.	./.	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	./.	1/1	./.	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0
+3	16255263	SNP-3.16253910.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/1	./.	0/1	0/0	./.	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/1	./.	1/1	1/1	0/0	./.	1/1	./.	./.	0/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/1	./.	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/1	0/1	1/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	1/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1
+3	16257142	SNP-3.16255789.	A	G	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||104|c.*104T>C|1424|LOC_Os03g28270|protein_coding|CODING|LOC_Os03g28270.1|10|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1
+3	16258144	SNP-3.16256791.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Cgc/Tgc|p.Arg1274Cys/c.3820G>T|1424|LOC_Os03g28270|protein_coding|CODING|LOC_Os03g28270.1|8|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	0/0	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	./.	0/0	./.	./.	./.	0/0	0/0	1/1	0/0	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	16258485	SNP-3.16257132.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.3708+199G>T|1424|LOC_Os03g28270|protein_coding|CODING|LOC_Os03g28270.1|7|1)	GT	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	16258806	SNP-3.16257453.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.3607-21T>C|1424|LOC_Os03g28270|protein_coding|CODING|LOC_Os03g28270.1|6|1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/1	1/1	0/1	0/0	0/0	0/1	1/1	0/1	1/1	0/1	0/0	0/0	0/0	1/1	1/1	0/1	0/1	1/1	1/1	0/0	0/0	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	1/1	1/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1
+3	16258883	SNP-3.16257530.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.3607-98T>C|1424|LOC_Os03g28270|protein_coding|CODING|LOC_Os03g28270.1|6|1)	GT	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/1	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/1
+3	16259008	SNP-3.16257655.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|Aga/Cga|p.Arg1197Arg/c.3589T>C|1424|LOC_Os03g28270|protein_coding|CODING|LOC_Os03g28270.1|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	0/0	./.	0/0	./.	./.	./.	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	1/1	./.	1/1	./.	./.	1/1	0/0	1/1	./.	./.	./.	./.	./.	0/0	1/1	./.	./.	0/0	./.	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0
+3	16260428	SNP-3.16259075.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|tAc/tCc|p.Tyr1032Ser/c.3095T>C|1424|LOC_Os03g28270|protein_coding|CODING|LOC_Os03g28270.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	0/0	0/0	0/0	1/1	./.	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/1	1/1	0/1	0/1	./.	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/1	./.	0/0	./.	0/0	0/0	1/1	1/1	0/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	./.	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	./.	0/0	./.	0/0	0/0	./.	1/1	1/1	0/1	1/1	0/1	0/0	1/1	1/1	0/0	./.	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	./.	0/0	0/0	1/1	1/1	./.	1/1
+3	16260660	SNP-3.16259307.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Gcc/Ccc|p.Ala955Pro/c.2863T>C|1424|LOC_Os03g28270|protein_coding|CODING|LOC_Os03g28270.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	./.	./.	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	0/0	./.	0/0	0/1	./.	./.	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	1/1	1/1	0/0	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	./.	./.	0/0	1/1
+3	16263079	SNP-3.16261725.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cGt/cCt|p.Arg684Pro/c.2051T>C|1424|LOC_Os03g28270|protein_coding|CODING|LOC_Os03g28270.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/1	1/1	1/1	0/1	0/0	0/0	0/0	0/1	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	./.	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/1	0/0	0/1	0/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0
+3	16264069	SNP-3.16262715.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gAg/gTg|p.Glu354Val/c.1061G>T|1424|LOC_Os03g28270|protein_coding|CODING|LOC_Os03g28270.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	./.	./.	./.	0/0	0/1	1/1	0/1	0/0	1/1	./.	0/0	0/0	0/0	0/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	./.	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	1/1	0/1	1/1	0/0	0/1	0/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	./.	0/0	./.	./.	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0
+3	16266636	SNP-3.16265282.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/1	0/1	0/0	1/1	./.	1/1	0/0	1/1	1/1	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	16268544	SNP-3.16267190.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	./.	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	16269971	SNP-3.16268617.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Cag/Gag|p.Gln105Glu/c.313A>G|144|LOC_Os03g28280|protein_coding|CODING|LOC_Os03g28280.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1
+3	16270468	SNP-3.16269114.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1
+3	16271615	SNP-3.16270261.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	0/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	1/1	0/1	1/1	0/0	0/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	16275105	SNP-3.16273751.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	16275267	SNP-3.16273913.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	16276606	SNP-3.16275252.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	./.	0/0	0/0	0/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	0/0	1/1	./.	0/0	0/0	0/0	./.	./.	./.	./.	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	./.	./.	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/1	0/0	0/1	0/1	1/1	0/0	0/0	1/1	1/1	./.	./.	0/0	0/1	0/0	0/1	0/0	0/1	0/0	./.	0/0	./.	./.	0/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	./.	1/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/1	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	16277496	SNP-3.16276142.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1
+3	16278608	SNP-3.16277254.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	16279097	SNP-3.16277743.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	./.	0/0	1/1	./.	./.	./.	./.	1/1	1/1	1/1	./.	1/1	./.	./.	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	./.	0/0	0/0	./.	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	./.	1/1	0/0	0/0	0/0	./.	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	./.	./.	1/1	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	./.	1/1	0/0	./.	1/1	./.	1/1	./.	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1
+3	16279194	SNP-3.16277840.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/1	0/1	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/1	0/0	0/0	1/1	./.	0/0	0/1	0/0	./.	1/1	0/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	./.	0/0	0/0	1/1	1/1	0/0	1/1
+3	16283872	SNP-3.16282518.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Tca/Gca|p.Ser192Ala/c.574A>G|635|LOC_Os03g28300|protein_coding|CODING|LOC_Os03g28300.2|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),missense_variant(MODERATE|MISSENSE|Tca/Gca|p.Ser192Ala/c.574A>G|859|LOC_Os03g28300|protein_coding|CODING|LOC_Os03g28300.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	0/1	0/0	0/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	./.	1/1	0/0	0/0	0/1	./.	0/1	1/1	0/1	0/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	./.	1/1	1/1	./.	1/1
+3	16283978	SNP-3.16282624.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aTc/aAc|p.Ile227Asn/c.680C>A|635|LOC_Os03g28300|protein_coding|CODING|LOC_Os03g28300.2|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),missense_variant(MODERATE|MISSENSE|aTc/aAc|p.Ile227Asn/c.680C>A|859|LOC_Os03g28300|protein_coding|CODING|LOC_Os03g28300.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0	./.	0/0	0/0	0/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/0	1/1	0/0
+3	16284368	SNP-3.16283014.	C	A	.	.	PR;EFF=synonymous_variant(LOW||cAt/cAt|p.His357His/c.1070C>A|635|LOC_Os03g28300|protein_coding|CODING|LOC_Os03g28300.2|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW||cAt/cAt|p.His357His/c.1070C>A|859|LOC_Os03g28300|protein_coding|CODING|LOC_Os03g28300.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/1	1/1	./.	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/1	./.	0/0	./.	1/1	0/0	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0
+3	16284457	SNP-3.16283103.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Cta/Gta|p.Leu387Val/c.1159A>G|635|LOC_Os03g28300|protein_coding|CODING|LOC_Os03g28300.2|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),missense_variant(MODERATE|MISSENSE|Cta/Gta|p.Leu387Val/c.1159A>G|859|LOC_Os03g28300|protein_coding|CODING|LOC_Os03g28300.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1
+3	16289377	SNP-3.16288023.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.2399-650C>A|859|LOC_Os03g28300|protein_coding|CODING|LOC_Os03g28300.1|7|1),intron_variant(MODIFIER|||c.*926-650C>A|635|LOC_Os03g28300|protein_coding|CODING|LOC_Os03g28300.2|5|1)	GT	./.	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/1	./.	0/0	./.	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	./.	./.	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/1	1/1	0/0	1/1	0/1	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/1	./.	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0
+3	16293444	SNP-3.16292090.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	16294316	SNP-3.16292962.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gCt/gTt|p.Ala672Val/c.2015G>T|748|LOC_Os03g28310|protein_coding|CODING|LOC_Os03g28310.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	0/1	0/0	1/1	1/1	1/1	0/1	0/1	0/0	./.	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	16296108	SNP-3.16294754.	C	A	.	.	PR;EFF=synonymous_variant(LOW||Tct/Tct|p.Ser75Ser/c.223G>T|748|LOC_Os03g28310|protein_coding|CODING|LOC_Os03g28310.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	16297362	SNP-3.16296008.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	./.	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/1	0/0	1/1	./.	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	16298293	SNP-3.16296939.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/1	0/0	./.	0/1	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	./.	./.	0/0	./.	0/1	0/0	./.	./.	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	./.	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	1/1	1/1	0/0	1/1
+3	16300464	SNP-3.16299110.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	16301802	SNP-3.16300448.	C	A	.	.	PR;EFF=synonymous_variant(LOW||cgT/cgT|p.Arg784Arg/c.2352G>T|816|LOC_Os03g28330|protein_coding|CODING|LOC_Os03g28330.1|15|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW||cgT/cgT|p.Arg784Arg/c.2352G>T|816|LOC_Os03g28330|protein_coding|CODING|LOC_Os03g28330.2|15|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW||cgT/cgT|p.Arg784Arg/c.2352G>T|816|LOC_Os03g28330|protein_coding|CODING|LOC_Os03g28330.3|15|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW||cgT/cgT|p.Arg784Arg/c.2352G>T|816|LOC_Os03g28330|protein_coding|CODING|LOC_Os03g28330.4|14|1|WARNING_REF_DOES_NOT_MATCH_GENOME),3_prime_UTR_variant(MODIFIER||926|c.*832G>T|567|LOC_Os03g28330|protein_coding|CODING|LOC_Os03g28330.5|13|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/1	./.	./.	0/0	0/1	0/0	0/0	1/1	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/1	1/1	./.	./.	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	0/0	./.	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	./.	1/1	0/0	1/1	./.	0/0	0/1	./.	0/0	./.	1/1	1/1	1/1	0/0	./.	./.	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/1	0/0	0/0	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	./.	0/0
+3	16305363	SNP-3.16304009.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.111-144G>T|816|LOC_Os03g28330|protein_coding|CODING|LOC_Os03g28330.1|2|1),intron_variant(MODIFIER|||c.111-144G>T|816|LOC_Os03g28330|protein_coding|CODING|LOC_Os03g28330.2|2|1),intron_variant(MODIFIER|||c.111-144G>T|816|LOC_Os03g28330|protein_coding|CODING|LOC_Os03g28330.3|2|1),intron_variant(MODIFIER|||c.111-144G>T|816|LOC_Os03g28330|protein_coding|CODING|LOC_Os03g28330.4|1|1),intron_variant(MODIFIER|||c.111-144G>T|567|LOC_Os03g28330|protein_coding|CODING|LOC_Os03g28330.5|2|1)	GT	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	16305784	SNP-3.16304430.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.110+164T>C|816|LOC_Os03g28330|protein_coding|CODING|LOC_Os03g28330.1|2|1),intron_variant(MODIFIER|||c.110+164T>C|816|LOC_Os03g28330|protein_coding|CODING|LOC_Os03g28330.2|2|1),intron_variant(MODIFIER|||c.110+164T>C|816|LOC_Os03g28330|protein_coding|CODING|LOC_Os03g28330.3|2|1),intron_variant(MODIFIER|||c.110+164T>C|816|LOC_Os03g28330|protein_coding|CODING|LOC_Os03g28330.4|1|1),intron_variant(MODIFIER|||c.110+164T>C|567|LOC_Os03g28330|protein_coding|CODING|LOC_Os03g28330.5|2|1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1
+3	16306048	SNP-3.16304694.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Gct/Tct|p.Ala4Ser/c.10G>T|816|LOC_Os03g28330|protein_coding|CODING|LOC_Os03g28330.1|2|1),missense_variant(MODERATE|MISSENSE|Gct/Tct|p.Ala4Ser/c.10G>T|816|LOC_Os03g28330|protein_coding|CODING|LOC_Os03g28330.2|2|1),missense_variant(MODERATE|MISSENSE|Gct/Tct|p.Ala4Ser/c.10G>T|816|LOC_Os03g28330|protein_coding|CODING|LOC_Os03g28330.3|2|1),missense_variant(MODERATE|MISSENSE|Gct/Tct|p.Ala4Ser/c.10G>T|567|LOC_Os03g28330|protein_coding|CODING|LOC_Os03g28330.5|2|1),missense_variant(MODERATE|MISSENSE|Gct/Tct|p.Ala4Ser/c.10G>T|816|LOC_Os03g28330|protein_coding|CODING|LOC_Os03g28330.4|1|1)	GT	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	1/1	0/0	./.	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	./.	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/1	./.	./.	0/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	./.	0/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/1	0/0	./.	0/1	0/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	./.	1/1	0/0
+3	16307341	SNP-3.16305987.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.-31+192G>T|816|LOC_Os03g28330|protein_coding|CODING|LOC_Os03g28330.1|1|1),intron_variant(MODIFIER|||c.-31+192G>T|567|LOC_Os03g28330|protein_coding|CODING|LOC_Os03g28330.5|1|1)	GT	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/1	0/0	./.	0/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	16307741	SNP-3.16306387.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1
+3	16308213	SNP-3.16306859.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	1/1	1/1	./.	1/1
+3	16308525	SNP-3.16307171.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/1	0/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	0/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	16309467	SNP-3.16308113.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	./.	./.	0/0	./.	0/0	./.	1/1	0/0	0/0	./.	1/1	./.	1/1	1/1	./.	./.	0/0	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	./.	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	1/1	./.	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	./.	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	./.	./.	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	./.	1/1	./.	0/0	1/1	1/1	./.	0/0	1/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0
+3	16310777	SNP-3.16309423.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1
+3	16310932	SNP-3.16309578.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1
+3	16314149	SNP-3.16312795.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	0/0	0/0	1/1	./.	./.	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	1/1	./.	./.	0/0	0/0	./.	./.	1/1	./.	./.	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	./.	./.	1/1	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	./.	./.	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	./.	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0
+3	16315527	SNP-3.16314173.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	0/1	0/0	1/1	0/0	1/1	./.	1/1	0/1	0/0	0/1	0/0	0/0	1/1	1/1	1/1	0/1	1/1	0/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	1/1	1/1	0/0	0/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	./.	1/1	0/0	0/0	0/1	0/1	0/1	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/1	0/0	1/1	./.	1/1	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/1	1/1	0/0
+3	16317559	SNP-3.16316205.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	./.	0/0	0/0	0/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	./.	./.	0/0	0/0	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/1	1/1	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/1	0/0	./.	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	./.	./.	./.	0/0	./.	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	./.	./.	0/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	./.	1/1	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0
+3	16321861	SNP-3.16320507.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/1	1/1	0/0	0/1	1/1	0/1	1/1	0/0	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/1	1/1	0/0	./.	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	16322325	SNP-3.16320971.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	1/1	0/0	./.	1/1	1/1	./.	0/0	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	./.	1/1	0/0	1/1	1/1	0/0	1/1	0/0	./.	./.	./.	./.	1/1	0/0	./.	1/1	1/1	1/1	./.	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0
+3	16324424	SNP-3.16323070.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	0/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1
+3	16325371	SNP-3.16324017.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1
+3	16326374	SNP-3.16325020.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	./.	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	16330389	SNP-3.16329035.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1
+3	16331393	SNP-3.16330039.	A	G	.	.	PR;EFF=synonymous_variant(LOW||cGa/cGa|p.Arg40Arg/c.119A>G|266|LOC_Os03g28350|protein_coding|CODING|LOC_Os03g28350.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/1	0/0	0/0	1/1	0/0	0/0	./.	0/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/1	0/0	1/1	0/0	0/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/1	0/1	0/0	0/0	./.	./.	0/0	0/1	1/1	0/0	0/0	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	./.	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	./.	1/1	0/0	1/1
+3	16331681	SNP-3.16330327.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aCg/aGg|p.Thr136Arg/c.407A>G|266|LOC_Os03g28350|protein_coding|CODING|LOC_Os03g28350.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/1	0/0	1/1	1/1	0/1	0/0	0/1	0/0	1/1	1/1	./.	0/0	1/1	./.	1/1	0/0	./.	1/1	0/1	1/1	./.	./.	0/0	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	./.	0/1	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	1/1	./.	1/1	0/1	0/1	0/1	0/0	0/1	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/1	1/1	0/0	0/0	1/1	0/1	./.	0/1	./.	0/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/1	1/1	0/1	0/0	1/1
+3	16331717	SNP-3.16330363.	C	A	.	.	PR;EFF=synonymous_variant(LOW||tAc/tAc|p.Tyr148Tyr/c.443C>A|266|LOC_Os03g28350|protein_coding|CODING|LOC_Os03g28350.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	./.	0/0	1/1	1/1	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	./.	./.	0/0	./.	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	./.	0/0	./.	./.	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0
+3	16333225	SNP-3.16331871.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/1	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	./.	1/1	./.	0/0	1/1	0/1	1/1	0/0	0/1	./.	0/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	./.	./.	1/1	0/1	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0
+3	16333844	SNP-3.16332490.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	./.	./.	1/1	0/0	./.	./.	0/0	./.	1/1	./.	./.	0/0	./.	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	./.	0/0	1/1	./.	1/1	./.	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	./.	0/0	./.	0/0	1/1	0/0	1/1	1/1	./.	1/1	./.	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0
+3	16334375	SNP-3.16333021.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|gtA/gtC|p.Val309Val/c.927T>C|352|LOC_Os03g28360|protein_coding|CODING|LOC_Os03g28360.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1
+3	16334945	SNP-3.16333591.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|ttA/ttT|p.Leu203Phe/c.609G>T|352|LOC_Os03g28360|protein_coding|CODING|LOC_Os03g28360.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	./.	./.	1/1	./.	0/0	0/0	./.	1/1	./.	0/0	./.	./.	0/1	./.	./.	./.	1/1	0/1	1/1	1/1	1/1	0/0	0/1	0/0	0/1	0/0	1/1	0/0	./.	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	./.	0/0	1/1	./.	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	./.	./.	./.	0/0	./.	1/1	./.	0/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	16338196	SNP-3.16336842.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.161+238G>T|352|LOC_Os03g28360|protein_coding|CODING|LOC_Os03g28360.1|1|1)	GT	./.	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	./.	0/1	0/0	./.	0/1	./.	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/1	0/1	./.	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	./.	0/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/1	./.	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/1	0/0	1/1	./.	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	16339322	SNP-3.16337968.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	1/1	0/0	0/0	0/0	./.	0/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/1	0/0	0/1	1/1	1/1	./.	./.	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/1	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	./.	0/0	1/1	0/0	0/1	0/1	./.	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	./.	0/0
+3	16340091	SNP-3.16338737.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/1	0/1	0/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/1	0/1	0/0	./.	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/1	0/0	0/1	0/0	0/0	1/1	0/0	0/1	1/1	0/0	1/1	./.	1/1	0/1	0/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/1	1/1	./.	0/1	1/1	1/1	0/1	0/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	./.	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1
+3	16340649	SNP-3.16339295.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	1/1	0/0	./.	0/0	./.	./.	0/0	./.	./.	1/1	1/1	./.	0/0	0/0	0/0	1/1	./.	./.	./.	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/1	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	./.	0/1	./.	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	./.	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0
+3	16341869	SNP-3.16340515.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	16342531	SNP-3.16341177.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	./.	0/1	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/1	1/1	1/1	0/1	0/1	1/1	1/1	0/0	./.	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1
+3	16342579	SNP-3.16341225.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	./.	./.	1/1	./.	./.	0/0	0/0	1/1	0/1	./.	0/1	0/0	1/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	./.	./.	0/0	1/1	1/1	./.	0/0	./.	./.	./.	0/0	1/1	1/1	./.	./.	0/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	1/1	0/0	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1
+3	16342932	SNP-3.16341578.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	./.	0/0	0/1	./.	0/0	./.	./.	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	./.	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	./.	./.	0/0	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0
+3	16345758	SNP-3.16344404.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	./.	0/0	1/1	./.	0/0	1/1	0/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	1/1	0/0	0/0	./.	1/1	0/1	0/0	./.	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	./.	./.	0/0	0/0	1/1	./.	0/1	0/1	1/1	./.	1/1	1/1	1/1	./.	0/0	1/1	0/0	./.	0/0	./.	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0
+3	16346000	SNP-3.16344646.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	1/1	1/1	0/0	./.	./.	1/1	1/1	./.	./.	./.	./.	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	./.	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	./.	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	./.	1/1	./.	1/1	0/0	0/0	./.	1/1	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1
+3	16349441	SNP-3.16348087.	A	G	.	.	PR;EFF=synonymous_variant(LOW||gGc/gGc|p.Gly849Gly/c.2546A>G|1275|LOC_Os03g28370|protein_coding|CODING|LOC_Os03g28370.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	./.	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	./.	./.	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0	1/1	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1
+3	16352546	SNP-3.16351192.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	0/0	./.	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/0	./.	0/0	./.	1/1	1/1	0/0	./.	1/1	0/0	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	1/1	1/1	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	1/1	1/1	./.	1/1	1/1	0/0	./.	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	./.	./.	./.	1/1	1/1	1/1	0/0	./.	1/1	0/0	./.	0/0	./.	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	1/1	./.	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	./.	1/1	1/1	./.	./.	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0	0/0	./.	./.	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0
+3	16353769	SNP-3.16352415.	C	A	.	.	PR;EFF=stop_gained(HIGH|NONSENSE|Aaa/Taa|p.Lys511*/c.1531G>T|704|LOC_Os03g28380|protein_coding|CODING|LOC_Os03g28380.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME);LOF=(LOC_Os03g28380|LOC_Os03g28380|1|1.00);NMD=(LOC_Os03g28380|LOC_Os03g28380|1|1.00)	GT	1/1	1/1	0/0	./.	1/1	0/0	1/1	./.	1/1	./.	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	./.	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	./.	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	0/0	./.	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	./.	./.	0/0	./.	./.	./.	0/0	./.	0/0	./.	0/0	./.	0/0	./.	./.	1/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	./.	./.	1/1	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	1/1	0/0	./.	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	./.	0/0
+3	16356870	SNP-3.16355516.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/1	0/0	./.	0/0	0/1	0/0	0/1	./.	0/0	./.	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	1/1	0/1	1/1	./.	./.	./.	0/0	1/1	1/1	1/1	1/1	0/1	./.	1/1	1/1	0/0	0/1	1/1	./.	1/1	0/1	0/0	1/1	1/1	1/1	1/1	./.	./.	./.	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/1	0/0	./.	0/0	1/1	0/0	0/0	./.	0/1	0/0	1/1	./.	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	./.	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	0/0	0/0	1/1	1/1	./.	0/0	./.	./.	./.	0/1	./.	1/1	0/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/1	1/1	./.	0/1	./.	0/0	./.	1/1	0/0	1/1	1/1	./.	0/1	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	./.	0/0	0/1
+3	16359129	SNP-3.16357775.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|tTt/tAt|p.Phe101Tyr/c.302C>A|170|LOC_Os03g28389|protein_coding|CODING|LOC_Os03g28389.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),3_prime_UTR_variant(MODIFIER||686|c.*686G>T|187|LOC_Os03g28400|protein_coding|CODING|LOC_Os03g28400.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	./.	./.	1/1	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	./.	./.	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	./.	./.	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	./.	1/1	1/1	./.	1/1	./.	./.	./.	0/0	1/1	0/0	./.	./.	1/1	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	./.	./.	0/0	1/1	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	1/1	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	./.	0/0	1/1	./.	1/1	./.	0/0	./.	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	./.	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	0/0	1/1	1/1	./.	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0
+3	16359580	SNP-3.16358226.	C	A	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||235|c.*235G>T|187|LOC_Os03g28400|protein_coding|CODING|LOC_Os03g28400.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/1	1/1	0/0	0/0	1/1	0/1	1/1	0/0	./.	0/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	./.	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/1	0/0
+3	16359798	SNP-3.16358444.	A	G	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||17|c.*17T>C|187|LOC_Os03g28400|protein_coding|CODING|LOC_Os03g28400.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1
+3	16361579	SNP-3.16360225.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.158+329T>C|187|LOC_Os03g28400|protein_coding|CODING|LOC_Os03g28400.1|2|1)	GT	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	0/0	0/0	1/1	0/0	0/0	0/1	1/1	./.	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	./.	1/1	./.	1/1	./.	./.	./.	1/1	0/0	0/0	1/1	1/1	1/1	./.	./.	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	./.	0/0	0/0	1/1	1/1	1/1	./.	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	./.	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	1/1	1/1	./.	1/1	./.	0/0	1/1	0/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	./.	0/1
+3	16361683	SNP-3.16360329.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.158+225T>C|187|LOC_Os03g28400|protein_coding|CODING|LOC_Os03g28400.1|2|1)	GT	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/1	0/0	1/1	0/1	./.	0/0	0/0	./.	0/1	1/1	0/1	0/1	0/0	./.	0/1	0/1	0/1	0/1	1/1	1/1	1/1	./.	0/0	0/1	0/1	0/1	0/1	0/1	./.	1/1	0/1	0/1	0/0	0/0	./.	1/1	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	./.	./.	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/1	0/0	1/1	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/1	0/0	1/1
+3	16366254	SNP-3.16383185.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	./.	0/0	0/1	0/0	1/1	0/0	1/1	0/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	./.	1/1	./.	0/0	./.	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	./.	./.	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/1	1/1	./.	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0
+3	16368468	SNP-3.16380971.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	./.	./.	1/1	0/0	./.	1/1	0/0	0/1	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/1	0/1	./.	./.	1/1	./.	./.	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	./.	./.	./.	0/0	0/1	0/0	0/1	0/0	./.	0/1	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	0/0	./.	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	./.	0/0	1/1	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	0/0	./.	./.	1/1	0/0	0/0	0/0	1/1	0/0
+3	16379310	SNP-3.16370129.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/1	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	0/1	0/0	0/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0
+3	16394336	SNP-3.16392980.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	0/0	1/1	1/1	0/0	./.	./.	./.	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	./.	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	1/1	1/1	0/0	1/1	0/0	1/1	./.	./.	0/0	1/1	1/1	./.	1/1	./.	0/0	./.	1/1	1/1	0/0	./.	./.	./.	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	./.	./.	./.	1/1	./.	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	./.	1/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	./.	0/0	./.	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0
+3	16399536	SNP-3.16398180.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	16399742	SNP-3.16398386.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	0/1	1/1	1/1	0/0	0/1	./.	0/0	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/1	./.	0/1	./.	0/0	0/0	./.	0/0	0/1	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	1/1	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/1	0/1	1/1	1/1	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1
+3	16400147	SNP-3.16398791.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	./.	./.	./.	0/0	./.	1/1	0/0	0/0	1/1	0/0	./.	0/0	./.	./.	1/1	1/1	1/1	./.	./.	./.	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	0/1	1/1	0/1	./.	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	1/1	./.	1/1	0/1	./.	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	./.	0/0	1/1	1/1	0/0	1/1	./.	0/0	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	0/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1
+3	16400449	SNP-3.16399093.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	./.	0/0	./.	./.	./.	0/0	./.	./.	./.	1/1	./.	./.	./.	1/1	0/0	1/1	./.	./.	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	./.	./.	0/0	./.	0/0	./.	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1
+3	16400652	SNP-3.16399296.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gCg/gTg|p.Ala102Val/c.305G>T|125|LOC_Os03g28920|protein_coding|CODING|LOC_Os03g28920.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	1/1	1/1	1/1	./.	0/0	./.	1/1	./.	1/1	0/0	0/1	0/0	0/0	./.	1/1	0/1	0/1	1/1	1/1	0/0	0/0	0/0	./.	./.	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/1	0/0	./.	0/0	./.	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	1/1	0/0	0/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0	./.	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	./.	./.	0/0	./.	./.	0/0
+3	16400670	SNP-3.16399314.	C	A	.	.	PR;EFF=synonymous_variant(LOW||gTg/gTg|p.Val96Val/c.287G>T|125|LOC_Os03g28920|protein_coding|CODING|LOC_Os03g28920.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	./.	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	./.	./.	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	./.	./.	./.	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0
+3	16400718	SNP-3.16399362.	C	A	.	.	PR;EFF=synonymous_variant(LOW||cTa/cTa|p.Leu80Leu/c.239G>T|125|LOC_Os03g28920|protein_coding|CODING|LOC_Os03g28920.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	./.	./.	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	0/1	0/1	1/1	0/0	1/1	0/0	1/1	./.	0/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/1	0/0	0/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/1	0/0
+3	16401184	SNP-3.16399828.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	./.	1/1	./.	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	./.	1/1	1/1	0/0	0/0	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	./.	./.	0/0	./.	0/0	1/1	0/0	./.	0/0	./.	./.	1/1	./.	0/0	0/0	0/0	1/1	./.	0/0	./.	1/1	0/0	1/1	./.	1/1	./.	./.	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0
+3	16407522	SNP-3.16406166.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0
+3	16410397	SNP-3.16409041.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/1	./.	./.	0/0	./.	1/1	./.	./.	./.	./.	1/1	1/1	./.	./.	./.	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/1	./.	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	./.	./.	./.	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	./.	./.	./.	./.	0/0	0/0	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/1	./.	./.	0/0	./.	./.	1/1	0/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	./.	0/0	0/0	./.	./.	0/0	1/1	./.	./.	1/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	./.
+3	16411046	SNP-3.16409690.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	1/1	1/1	1/1	0/0	0/1	./.	0/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/1	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	./.	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	./.	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0
+3	16412003	SNP-3.16410647.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/1	1/1	1/1	0/1	0/0	1/1	./.	1/1	0/0	0/1	./.	0/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/1	0/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	./.	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0
+3	16414648	SNP-3.16413292.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	1/1	0/0	0/0	0/0	1/1	0/1	0/0	./.	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/1	0/1	0/1	1/1	1/1	0/0	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/1	./.	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/1	./.	0/0	./.	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/0	1/1	0/0
+3	16415105	SNP-3.16413749.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	1/1	./.	1/1	1/1	./.	0/0	1/1	./.	./.	./.	1/1	0/0	./.	0/0	./.	1/1	1/1	./.	./.	./.	0/0	1/1	./.	./.	./.	./.	1/1	1/1	./.	./.	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	./.	1/1	./.	./.	1/1	1/1	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1	./.	1/1	./.	1/1	./.	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	1/1	./.	./.	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	./.	0/0
+3	16417170	SNP-3.16415814.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|Agg/Cgg|p.Arg273Arg/c.817T>C|445|LOC_Os03g28950|protein_coding|CODING|LOC_Os03g28950.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/1	0/1	0/0	0/0	1/1	0/1	./.	0/1	0/1	0/0	1/1	0/1	0/1	0/1	0/1	./.	1/1	1/1	0/1	1/1	0/1	0/1	0/1	0/1	0/1	0/1	1/1	0/1	0/1	0/0	1/1	0/1	0/1	1/1	0/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/0	1/1	1/1	0/0	0/0	1/1	0/1	1/1	1/1	1/1	1/1	./.	0/1	0/1	0/0	1/1	1/1	0/1	0/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/1	0/0	0/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	./.	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/1	0/1	0/0	0/1
+3	16417403	SNP-3.16416047.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gAt/gTt|p.Asp195Val/c.584G>T|445|LOC_Os03g28950|protein_coding|CODING|LOC_Os03g28950.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/1	0/0	0/1	0/0	0/1	./.	0/1	0/0	0/0	0/0	0/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	1/1	0/0
+3	16417511	SNP-3.16416155.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gAt/gCt|p.Asp159Ala/c.476T>C|445|LOC_Os03g28950|protein_coding|CODING|LOC_Os03g28950.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	0/1	0/1	0/1	0/0	0/0	1/1	0/1	1/1	0/1	./.	0/0	1/1	0/1	0/1	0/0	./.	./.	1/1	1/1	0/1	1/1	./.	0/1	0/1	0/1	0/1	0/1	1/1	0/1	1/1	0/0	1/1	0/1	0/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	0/0	1/1	1/1	0/1	0/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/1	0/0	0/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/1	0/1	0/0	0/1
+3	16417802	SNP-3.16416446.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aCg/aTg|p.Thr62Met/c.185G>T|445|LOC_Os03g28950|protein_coding|CODING|LOC_Os03g28950.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	./.	1/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	16419503	SNP-3.16418147.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/1	0/0	1/1	./.	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/1	./.	./.	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0
+3	16420292	SNP-3.16418936.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	0/1	1/1	1/1	0/0	1/1	0/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	1/1	1/1	0/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/1	0/0	./.	0/0	0/1	0/0	1/1	0/0	0/1	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0
+3	16421225	SNP-3.16419869.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0
+3	16422830	SNP-3.16421474.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0
+3	16425653	SNP-3.16424297.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	16427008	SNP-3.16425652.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.84+99C>A|799|LOC_Os03g28960|protein_coding|CODING|LOC_Os03g28960.1|1|1)	GT	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/1	1/1	0/0	0/0	1/1	0/1	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/1	1/1	0/0
+3	16428179	SNP-3.16426823.	C	A	.	.	PR;EFF=synonymous_variant(LOW||ccA/ccA|p.Pro83Pro/c.249C>A|799|LOC_Os03g28960|protein_coding|CODING|LOC_Os03g28960.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	16431723	SNP-3.16430367.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.967-253A>G|799|LOC_Os03g28960|protein_coding|CODING|LOC_Os03g28960.1|12|1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/1	0/1	0/1	0/1	0/0	0/1	0/0	0/0	0/0	0/1	0/0	./.	0/0	./.	1/1	./.	1/1	1/1	./.	./.	1/1	0/1	0/1	0/1	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/1	0/1	1/1	1/1	0/0	0/0	0/0	0/1	0/1	./.	0/1	./.	1/1	1/1	1/1	0/0	1/1	./.	./.	./.	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1
+3	16432162	SNP-3.16430806.	C	A	.	.	PR;EFF=synonymous_variant(LOW||gcA/gcA|p.Ala360Ala/c.1080C>A|799|LOC_Os03g28960|protein_coding|CODING|LOC_Os03g28960.1|14|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	16433028	SNP-3.16431672.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gaT/gaA|p.Asp433Glu/c.1299C>A|799|LOC_Os03g28960|protein_coding|CODING|LOC_Os03g28960.1|16|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	16437602	SNP-3.16436246.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.2032-114A>G|799|LOC_Os03g28960|protein_coding|CODING|LOC_Os03g28960.1|22|1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/1	1/1	1/1	1/1	./.	0/0	0/0	0/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0
+3	16439107	SNP-3.16437751.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|acT/acA|p.Thr797Thr/c.2391C>A|799|LOC_Os03g28960|protein_coding|CODING|LOC_Os03g28960.1|26|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	./.	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	1/1	./.	0/1	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/1	./.	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	./.	./.	./.	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	./.	1/1	0/0	1/1	./.	0/0	0/0	./.	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	./.	./.	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	./.	./.	0/0
+3	16440472	SNP-3.16439116.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	16442247	SNP-3.16440891.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/1	./.	0/0	0/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/1	./.	1/1	1/1	./.	0/1	0/1	1/1	0/0	./.	0/1	0/1	0/0	0/0	./.	./.	./.	0/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	./.	0/1	0/1	0/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	0/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/1	1/1	0/0	0/0	1/1	1/1	0/1	0/1	0/1	0/1	0/0	0/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/1	./.	0/0	0/1	1/1	0/0	0/0	0/1	0/1	0/1	./.	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/1	0/0	1/1
+3	16442748	SNP-3.16441392.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/1	0/0	./.	0/1	0/0	./.	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	./.	0/0	0/0	./.	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	16444005	SNP-3.16442649.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.279-297G>T|128|LOC_Os03g28969|protein_coding|CODING|LOC_Os03g28969.1|3|1)	GT	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	./.	0/0	./.	./.	0/0	1/1	0/0	0/0	./.	1/1	0/0	1/1	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	0/0	1/1	./.	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	./.	./.	1/1	0/0	1/1	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	./.	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	./.	./.	0/0	0/0	1/1	./.	0/0	1/1	1/1	./.	./.	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	./.	1/1	1/1	0/0
+3	16444551	SNP-3.16443195.	A	G	.	.	PR;EFF=synonymous_variant(LOW||gCa/gCa|p.Ala71Ala/c.212T>C|128|LOC_Os03g28969|protein_coding|CODING|LOC_Os03g28969.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/1	1/1	0/1	0/0	0/0	0/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0
+3	16444877	SNP-3.16443521.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.184-298G>T|128|LOC_Os03g28969|protein_coding|CODING|LOC_Os03g28969.1|2|1)	GT	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	./.	0/0	./.	0/0	./.	1/1	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	1/1	./.	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	./.	1/1	1/1	0/0
+3	16445595	SNP-3.16444239.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.183+123G>T|128|LOC_Os03g28969|protein_coding|CODING|LOC_Os03g28969.1|2|1)	GT	1/1	1/1	./.	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	./.	0/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/1	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	1/1	0/1	0/0	1/1	1/1	./.	0/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	./.	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/1	1/1	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0
+3	16445816	SNP-3.16444460.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Ggg/Cgg|p.Gly29Arg/c.85T>C|128|LOC_Os03g28969|protein_coding|CODING|LOC_Os03g28969.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/1	0/0	./.	0/1	0/0	0/1	1/1	0/0	./.	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/1	0/1	0/0	./.	./.	./.	./.	1/1	1/1	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	1/1	0/1	1/1	1/1	1/1	./.	0/0	0/1	0/0	./.	1/1	./.	1/1	./.	./.	1/1	0/1	./.	0/0	./.	./.	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	./.	1/1	./.	0/0	./.	1/1	1/1	0/0	0/0	1/1	0/0	./.	1/1	1/1	./.	0/0	./.	0/1	0/0	1/1	1/1	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/1	./.	0/0	0/0	1/1	./.	0/0	./.	./.	./.	./.	0/0	./.	./.	1/1	0/1	1/1	1/1	./.	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	./.	0/0	1/1
+3	16447361	SNP-3.16446005.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0
+3	16450518	SNP-3.16449162.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|gtC/gtG|p.Val351Val/c.1053A>G|744|LOC_Os03g28980|protein_coding|CODING|LOC_Os03g28980.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/1	0/0	0/0	./.	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	1/1	0/0	0/1	1/1	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	./.	./.	1/1	1/1	./.	1/1	0/0	0/0	./.	1/1	0/0	./.	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	1/1	0/1	0/0	0/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0
+3	16452818	SNP-3.16451462.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	./.	1/1	0/0	./.	1/1	0/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/1	0/0	1/1	0/1	0/1	1/1	0/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/0	./.	1/1	0/0	0/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	0/0	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	1/1	./.	./.	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1
+3	16454535	SNP-3.16453179.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	1/1	0/0	1/1	./.	1/1	./.	./.	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	./.	0/0	./.	1/1	1/1	./.	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	./.	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	./.	1/1	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	./.	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	1/1
+3	16461364	SNP-3.16460008.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/1	0/0	0/1	0/1	1/1	0/0	0/1	./.	0/0	0/0	0/1	0/0	1/1	0/0	./.	0/1	0/1	0/1	0/1	1/1	1/1	./.	./.	0/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	./.	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/1	1/1	1/1	0/1	0/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/1	0/1	./.	0/0	0/1	0/1	0/0	0/0	1/1	0/0	0/1	1/1	0/0	0/0	0/1	1/1	1/1	0/1	0/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/1	1/1	0/0	1/1
+3	16462377	SNP-3.16461021.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	./.	./.	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1
+3	16463564	SNP-3.16462208.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1
+3	16464250	SNP-3.16462894.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	0/0	./.	0/0	./.	./.	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	./.	0/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/1	0/0	0/1	0/1	0/0	1/1	./.	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/1	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0
+3	16464819	SNP-3.16463463.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	./.	1/1	1/1	1/1	0/0	1/1	./.	./.	0/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/1	0/0	1/1	0/1	1/1	./.	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	1/1	0/1	0/0	./.	1/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0
+3	16465142	SNP-3.16463786.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0
+3	16465232	SNP-3.16463876.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/1	./.	0/1	0/0	./.	1/1	0/0	0/0	1/1	0/0	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	0/1	./.	1/1	1/1	./.	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/1	./.	./.	0/0	0/0	1/1	0/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/1	1/1	1/1	0/1	./.	0/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	./.	0/1	0/1	0/0	./.	1/1	1/1	./.	./.	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	1/1	0/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/1	0/0	1/1	0/1	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/1	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1
+3	16465920	SNP-3.16464564.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	./.	./.	1/1	1/1	1/1	0/0	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	0/0	1/1	1/1	./.	0/0	1/1	./.	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	./.	./.	0/0	0/0	./.	1/1	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	1/1	./.	./.	1/1	1/1
+3	16469586	SNP-3.16468230ac.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	./.	1/1	./.	1/1	./.	./.	0/0	1/1	./.	1/1	1/1	0/0	0/0	./.	./.	./.	0/0	0/0	./.	./.	./.	1/1	0/0	0/0	0/0	./.	./.	./.	./.	0/0	./.	./.	./.	0/0	./.	./.	./.	0/0	./.	1/1	1/1	./.	1/1	0/0	./.	1/1	1/1	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	./.	./.	./.	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	./.	./.	./.	./.	./.	./.	1/1	1/1	0/0	0/0	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	16470346	SNP-3.16468990.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	./.	./.	0/0	0/0	1/1	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	./.	./.	0/0	0/0	0/0	0/1	0/0	1/1	./.	1/1	0/0	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	16473434	SNP-3.16472078.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.1738-181T>C|921|LOC_Os03g29020|protein_coding|CODING|LOC_Os03g29020.1|6|1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	0/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/1	0/0	./.	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	1/1	0/0	1/1
+3	16476167	SNP-3.16474811.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0
+3	16476452	SNP-3.16475096.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	./.	0/1	1/1	./.	0/1	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/1	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0
+3	16477921	SNP-3.16476565.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	0/1	0/0	1/1	0/1	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/1	1/1	1/1	./.	0/0	0/0	./.	0/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/1	1/1	1/1	1/1	1/1	./.	./.	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	./.	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	16478110	SNP-3.16476754.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1
+3	16478160	SNP-3.16476804.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/1	0/0	./.	./.	0/0	0/1	0/0	1/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/1	./.	./.	0/0	0/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	./.	./.	0/1	./.	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/1	1/1	./.	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/1	0/0	0/1	1/1	0/0	0/1	0/0	0/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	16478593	SNP-3.16477237.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	./.	0/0	1/1	./.	./.	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	1/1	./.	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	./.	./.	0/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/1	0/0	./.	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/1	0/0	1/1	./.	0/0	0/0	1/1	0/0
+3	16481773	SNP-3.16480417.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	./.	./.	./.	0/0	./.	0/0	./.	1/1	./.	./.	./.	1/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	./.	0/0	./.	0/0	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	./.	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0
+3	16483495	SNP-3.16482139.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	./.	0/0	0/1	0/0	./.	1/1	./.	1/1	1/1	1/1	./.	0/0	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	0/1	1/1	./.	1/1	./.	./.	0/0	0/0	./.	1/1	1/1	1/1	0/0	./.	0/0	0/1	1/1	1/1	./.	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/1	./.	0/0	./.	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0	1/1	1/1	0/0	./.	1/1	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	./.	1/1	0/0
+3	16494653	SNP-3.16493297.	A	G	.	.	PR;EFF=splice_region_variant(LOW|||c.266T>C|767|LOC_Os03g29035|protein_coding|CODING|LOC_Os03g29035.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW||aCg/aCg|p.Thr89Thr/c.266T>C|767|LOC_Os03g29035|protein_coding|CODING|LOC_Os03g29035.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	0/0	./.	0/0	1/1	0/0	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	./.	1/1	0/0	0/1	1/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	0/0	./.	0/1	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/1	0/1	./.	1/1	1/1	0/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/1	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/1	0/0	1/1	1/1	./.	0/0	1/1
+3	16496539	SNP-3.16495183.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/1	1/1	0/0	0/1	./.	0/0	0/0	0/1	0/0	0/1	./.	./.	0/1	./.	1/1	0/1	./.	./.	./.	1/1	./.	0/1	1/1	0/0	1/1	./.	0/1	0/0	0/0	0/1	1/1	0/1	./.	./.	0/0	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	1/1	./.	./.	1/1	0/0	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/1	0/0	0/0	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/1	./.	0/0	0/0	0/1	./.	0/1	./.	0/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	1/1	1/1	./.	0/0	1/1
+3	16500736	SNP-3.16499380.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	./.	0/0	0/0	1/1	0/0	./.	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	./.	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0
+3	16501781	SNP-3.16500425.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	./.	1/1	./.	./.	0/0	0/0	1/1	0/0	./.	1/1	0/0	./.	1/1	./.	0/0	1/1	./.	1/1	./.	./.	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	./.	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	./.	./.	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0
+3	16506045	SNP-3.16504689.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	./.	0/0	0/0	./.	1/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	./.	1/1	./.	1/1	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	./.	1/1	0/0	./.	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	1/1	./.	0/0	1/1	1/1	0/0	./.	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	1/1	1/1	0/0	0/0	./.	./.	0/0	./.	./.	1/1	1/1	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0
+3	16506581	SNP-3.16505225.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	./.	./.	./.	1/1	0/1	0/1	./.	0/1	./.	0/0	0/0	1/1	1/1	1/1	./.	./.	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	./.	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/1	./.	1/1	0/0	./.	0/1	./.	1/1	0/1	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	0/0	0/0	./.	0/0	./.	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	0/0	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	1/1	./.	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	1/1	0/0	1/1	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	1/1	0/0
+3	16506692	SNP-3.16505336.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	./.	0/1	./.	./.	./.	1/1	1/1	0/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	./.	1/1	0/1	./.	1/1	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/1	1/1	0/0	0/1	./.	0/0	0/0	1/1	1/1	0/0	0/0	./.	./.	1/1	0/0	0/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0
+3	16509058	SNP-3.16507702.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	./.	./.	./.	0/0	./.	0/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	./.	./.	0/0	0/0	0/1	1/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	1/1	0/0	1/1	./.	1/1	./.	1/1	0/0	0/0	0/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	0/0	1/1	./.	1/1	0/0	./.	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	./.	0/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	1/1	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	./.	0/0	./.	1/1	1/1	0/0	0/0
+3	16509658	SNP-3.16508302.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/1	0/0	./.	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/1	1/1	./.	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	1/1	0/0	1/1	0/1	1/1	0/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	./.	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	./.	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/1	0/0	1/1	1/1	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	1/1	1/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	./.	0/0
+3	16510248	SNP-3.16508892.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	./.	0/0	./.	0/0	0/1	./.	0/0	0/0	./.	./.	./.	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	16510365	SNP-3.16509009.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	./.	0/0	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/0	./.	./.	1/1	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	./.	1/1	1/1	0/0	./.	./.	1/1	1/1	0/0	0/0	./.	0/0	./.	1/1	0/0	./.	0/0	./.	1/1	0/0	1/1	./.	0/0	0/0	1/1	0/0	./.	./.	./.	0/0	./.	1/1	1/1	./.	0/0	0/0	1/1	./.	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	./.	./.	./.	./.
+3	16510486	SNP-3.16509130.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0
+3	16512835	SNP-3.16511479.	C	A	.	.	PR;EFF=synonymous_variant(LOW||gaA/gaA|p.Glu54Glu/c.162C>A|114|LOC_Os03g29065|protein_coding|CODING|LOC_Os03g29065.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	0/0	./.	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	./.	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0
+3	16515197	SNP-3.16513841.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/1	0/0	0/0	0/0	0/0	0/1	./.	0/1	0/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0
+3	16516237	SNP-3.16514881.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	./.	1/1	./.	0/0	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	./.	1/1	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	1/1	0/0	./.	./.	1/1	0/0	0/0	./.	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	1/1	./.	./.	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	1/1	./.	./.	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	1/1	1/1	1/1	./.	1/1	./.	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	./.	1/1
+3	16518919	SNP-3.16517563.	A	G	.	.	PR;EFF=synonymous_variant(LOW||tcG/tcG|p.Ser678Ser/c.2034A>G|689|LOC_Os03g29075|protein_coding|CODING|LOC_Os03g29075.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0
+3	16521187	SNP-3.16519831.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aaT/aaA|p.Asn515Lys/c.1545C>A|1006|LOC_Os03g29085|protein_coding|CODING|LOC_Os03g29085.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/1	./.	0/1	0/1	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	0/0	0/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/1	0/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	0/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0
+3	16523463	SNP-3.16522107.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.1880-259T>C|653|LOC_Os03g29100|protein_coding|CODING|LOC_Os03g29100.1|9|1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/1	./.	./.	1/1	./.	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/1	0/0	1/1	0/1	0/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	1/1	0/0	1/1	0/0	1/1	./.	0/1	0/0	0/1	0/1	0/0	0/0	0/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	./.	1/1	0/0	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	./.	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	./.	./.	0/1	0/0
+3	16524472	SNP-3.16523116.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.1451+34T>C|653|LOC_Os03g29100|protein_coding|CODING|LOC_Os03g29100.1|7|1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/1	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	./.	0/1	0/1	0/0	./.	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	./.	0/1	0/0	0/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	./.	0/0
+3	16528169	SNP-3.16526813.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	./.	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	./.	./.	./.	0/0	1/1	1/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/1	0/0	./.	0/1	1/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	1/1	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	1/1	./.	1/1	./.	0/0
+3	16528623	SNP-3.16527267.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/1	0/0	0/1	0/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/1	1/1
+3	16529883	SNP-3.16528527.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/1	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0
+3	16530467	SNP-3.16529111.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/1	./.	0/1	0/0	./.	./.	1/1	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	1/1	1/1	0/1	./.	0/1	0/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/1	0/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/1	./.	0/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1
+3	16530583	SNP-3.16529227.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	0/1	1/1	0/0	./.	./.	./.	./.	0/0	0/0	0/0	./.	0/0	0/1	0/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	1/1	./.	1/1	./.	./.	./.	0/0	0/1	./.	./.	1/1	0/0	1/1	1/1	0/0	0/0	1/1	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	0/1	./.	0/1	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	./.	0/0	1/1	0/0	0/1	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/1	1/1	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0
+3	16530591	SNP-3.16529235.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0
+3	16530801	SNP-3.16529445.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0
+3	16537232	SNP-3.16535876.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|aaC/aaT|p.Asn653Asn/c.1959G>T|863|LOC_Os03g29120|protein_coding|CODING|LOC_Os03g29120.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	./.	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	./.	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0
+3	16548895	SNP-3.16547539.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.340+188A>G|194|LOC_Os03g29140|protein_coding|CODING|LOC_Os03g29140.1|1|1)	GT	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	./.	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/1	1/1	1/1	0/1	./.	1/1	0/0	0/0	1/1	0/0	1/1	0/1	0/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	16548979	SNP-3.16547623.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.340+272A>G|194|LOC_Os03g29140|protein_coding|CODING|LOC_Os03g29140.1|1|1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0
+3	16549393	SNP-3.16548037.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.341-384A>G|194|LOC_Os03g29140|protein_coding|CODING|LOC_Os03g29140.1|1|1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/1	0/1	0/1	0/1	0/0	0/1	0/1	1/1	0/0	0/1	0/0	./.	1/1	0/1	0/1	0/1	0/1	0/1	0/1	0/1	0/0	./.	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	1/1	0/0	0/1	1/1	./.	1/1	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/1	1/1	1/1	0/0	1/1	1/1	0/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/1	1/1	1/1	./.	0/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/0	1/1	1/1	0/1	1/1	0/1	0/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/1	0/1	0/1	0/0	0/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/1	./.	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1
+3	16549481	SNP-3.16548125.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.341-296A>G|194|LOC_Os03g29140|protein_coding|CODING|LOC_Os03g29140.1|1|1)	GT	0/0	0/0	./.	0/1	0/0	0/0	./.	0/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/1	./.	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0
+3	16549648	SNP-3.16548292.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.341-129C>A|194|LOC_Os03g29140|protein_coding|CODING|LOC_Os03g29140.1|1|1)	GT	0/1	1/1	0/0	./.	0/0	0/0	1/1	0/1	1/1	./.	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	./.	0/0	1/1	1/1	./.	1/1	0/1	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0
+3	16549691	SNP-3.16548335.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.341-86A>G|194|LOC_Os03g29140|protein_coding|CODING|LOC_Os03g29140.1|1|1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0
+3	16549728	SNP-3.16548372.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.341-49A>G|194|LOC_Os03g29140|protein_coding|CODING|LOC_Os03g29140.1|1|1)	GT	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	./.	1/1	1/1	1/1	0/0	0/0	0/1	1/1	1/1	1/1	0/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	./.	./.	1/1	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	0/0	0/0
+3	16550325	SNP-3.16548969.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/1	0/0	0/0	./.	1/1	0/1	1/1	0/1	./.	./.	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/1	1/1	1/1	0/0	0/0	1/1	0/1	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/1	0/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0
+3	16550359	SNP-3.16549003.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	./.	./.	0/0	0/0	./.	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	1/1	0/0	0/0	1/1	0/0	1/1	0/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/1	0/1	1/1	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0
+3	16550385	SNP-3.16549029.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	0/1	1/1	./.	0/0	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	./.	./.	0/0	0/1	0/1	0/1	0/1	0/1	1/1	1/1	1/1	1/1	0/1	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/1	0/1	1/1	1/1	0/0	0/0	./.	1/1	1/1	0/1	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0
+3	16550983	SNP-3.16549627.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0
+3	16551258	SNP-3.16549902.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	./.	0/0	0/1	./.	./.	0/1	0/0	0/0	0/1	./.	0/0	1/1	0/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/1	0/0	0/1	0/1	1/1	1/1	0/1	0/0	0/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/1	0/1	0/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	./.	0/0
+3	16552163	SNP-3.16550807.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.286+427C>A|291|LOC_Os03g29150|protein_coding|CODING|LOC_Os03g29150.1|1|1),intron_variant(MODIFIER|||c.286+427C>A|269|LOC_Os03g29150|protein_coding|CODING|LOC_Os03g29150.2|1|1),intron_variant(MODIFIER|||c.286+427C>A|266|LOC_Os03g29150|protein_coding|CODING|LOC_Os03g29150.3|1|1)	GT	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	./.	1/1	./.	./.	1/1	0/0	./.	./.	./.	./.	0/0	1/1	0/0	./.	./.	./.	./.	./.	./.	./.	0/0	0/0	./.	./.	./.	0/0	0/0	./.	./.	0/1	./.	0/0	./.	./.	./.	./.	./.	./.	./.	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	./.	0/0	./.	1/1	1/1	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	./.	./.	./.	0/0	1/1	0/0	0/1	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	./.	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	./.	./.	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	1/1	1/1	0/0
+3	16552494	SNP-3.16551138.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.286+758C>A|291|LOC_Os03g29150|protein_coding|CODING|LOC_Os03g29150.1|1|1),intron_variant(MODIFIER|||c.286+758C>A|269|LOC_Os03g29150|protein_coding|CODING|LOC_Os03g29150.2|1|1),intron_variant(MODIFIER|||c.286+758C>A|266|LOC_Os03g29150|protein_coding|CODING|LOC_Os03g29150.3|1|1)	GT	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/1	0/1	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0
+3	16556476	SNP-3.16555120.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.287-471C>A|291|LOC_Os03g29150|protein_coding|CODING|LOC_Os03g29150.1|1|1),intron_variant(MODIFIER|||c.287-471C>A|269|LOC_Os03g29150|protein_coding|CODING|LOC_Os03g29150.2|1|1),intron_variant(MODIFIER|||c.287-471C>A|266|LOC_Os03g29150|protein_coding|CODING|LOC_Os03g29150.3|1|1)	GT	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/1	./.	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0
+3	16557632	SNP-3.16556276.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.377-564A>G|291|LOC_Os03g29150|protein_coding|CODING|LOC_Os03g29150.1|2|1),intron_variant(MODIFIER|||c.377-564A>G|269|LOC_Os03g29150|protein_coding|CODING|LOC_Os03g29150.2|2|1),intron_variant(MODIFIER|||c.377-564A>G|266|LOC_Os03g29150|protein_coding|CODING|LOC_Os03g29150.3|2|1)	GT	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/1	./.	1/1	0/1	1/1	1/1	./.	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/1	1/1	0/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0
+3	16559052	SNP-3.16557696.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.511-218A>G|291|LOC_Os03g29150|protein_coding|CODING|LOC_Os03g29150.1|3|1),intron_variant(MODIFIER|||c.511-218A>G|269|LOC_Os03g29150|protein_coding|CODING|LOC_Os03g29150.2|3|1),intron_variant(MODIFIER|||c.511-218A>G|266|LOC_Os03g29150|protein_coding|CODING|LOC_Os03g29150.3|3|1)	GT	0/1	0/0	0/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	./.	./.	./.	./.	./.	0/0	1/1	1/1	0/0	0/1	1/1	0/0	1/1	0/0	./.	1/1	0/0	1/1	./.	1/1	./.	1/1	1/1	./.	./.	./.	0/0	1/1	1/1	1/1	0/0	0/0	./.	./.	1/1	1/1	./.	0/0	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	0/0	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1
+3	16559774	SNP-3.16558418.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.669+346A>G|291|LOC_Os03g29150|protein_coding|CODING|LOC_Os03g29150.1|4|1),intron_variant(MODIFIER|||c.669+346A>G|269|LOC_Os03g29150|protein_coding|CODING|LOC_Os03g29150.2|4|1),intron_variant(MODIFIER|||c.669+346A>G|266|LOC_Os03g29150|protein_coding|CODING|LOC_Os03g29150.3|4|1)	GT	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/0	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1
+3	16560375	SNP-3.16559019.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.670-226A>G|291|LOC_Os03g29150|protein_coding|CODING|LOC_Os03g29150.1|4|1),intron_variant(MODIFIER|||c.670-226A>G|269|LOC_Os03g29150|protein_coding|CODING|LOC_Os03g29150.2|4|1),intron_variant(MODIFIER|||c.670-226A>G|266|LOC_Os03g29150|protein_coding|CODING|LOC_Os03g29150.3|4|1)	GT	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/0	./.	./.	1/1	0/0	./.	./.	./.	./.	1/1	0/0	./.	./.	./.	0/0	0/0	1/1	./.	./.	./.	1/1	0/0	0/0	./.	1/1	./.	1/1	1/1	./.	./.	./.	0/0	./.	./.	./.	./.	1/1	./.	./.	./.	1/1	0/0	./.	1/1	./.	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	./.	./.	./.	./.	./.	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	./.	./.	./.	1/1	1/1	1/1	./.	./.	./.	0/0	0/0	0/0	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	./.	./.	0/0	./.	./.	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	./.	0/0	1/1
+3	16560612	SNP-3.16559256.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ggC/ggG|p.Gly227Gly/c.681A>G|291|LOC_Os03g29150|protein_coding|CODING|LOC_Os03g29150.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW|SILENT|ggC/ggG|p.Gly227Gly/c.681A>G|266|LOC_Os03g29150|protein_coding|CODING|LOC_Os03g29150.3|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW|SILENT|ggC/ggG|p.Gly227Gly/c.681A>G|269|LOC_Os03g29150|protein_coding|CODING|LOC_Os03g29150.2|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1
+3	16560855	SNP-3.16559499.	C	A	.	.	PR;EFF=synonymous_variant(LOW||ttA/ttA|p.Leu284Leu/c.852C>A|291|LOC_Os03g29150|protein_coding|CODING|LOC_Os03g29150.1|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME),3_prime_UTR_variant(MODIFIER||114|c.*114C>A|269|LOC_Os03g29150|protein_coding|CODING|LOC_Os03g29150.2|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME),intron_variant(MODIFIER|||c.792+132C>A|266|LOC_Os03g29150|protein_coding|CODING|LOC_Os03g29150.3|5|1)	GT	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0
+3	16562821	SNP-3.16561465.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	0/1	./.	1/1	./.	1/1	1/1	1/1	0/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	./.	0/0	1/1
+3	16564271	SNP-3.16562915.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	./.	./.	./.	./.	./.	./.	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	1/1	1/1	0/0	./.	1/1	./.	./.	./.	./.	0/0	0/0	./.	1/1	./.	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0
+3	16566367	SNP-3.16565011.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/1	0/0	0/1	0/1	./.	./.	./.	./.	./.	1/1	./.	0/0	./.	1/1	1/1	0/0	0/0	./.	0/1	0/1	1/1	./.	0/0	0/0	1/1	0/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/1	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	./.	0/1	0/0	./.	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/1	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/1	./.	0/0	0/0	0/0	1/1	0/1	0/0	./.	0/0	1/1	./.	./.	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	./.	./.	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/1
+3	16566848	SNP-3.16565492.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	./.	./.	0/0	1/1	./.	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/0	1/1	./.	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	./.	./.	1/1	0/0	0/0	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	./.	./.	1/1	0/0	./.	0/0	1/1	./.	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1
+3	16569869	SNP-3.16568513.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	1/1
+3	16574681	SNP-3.16573325.	C	A	.	.	PR;EFF=splice_region_variant(LOW|||c.769C>A|561|LOC_Os03g29170|protein_coding|CODING|LOC_Os03g29170.1|5|1),splice_region_variant(LOW|||c.769C>A|474|LOC_Os03g29170|protein_coding|CODING|LOC_Os03g29170.2|5|1),intron_variant(MODIFIER|||c.769-3C>A|561|LOC_Os03g29170|protein_coding|CODING|LOC_Os03g29170.1|5|1),intron_variant(MODIFIER|||c.769-3C>A|474|LOC_Os03g29170|protein_coding|CODING|LOC_Os03g29170.2|5|1)	GT	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	./.	0/0	0/0	0/0	0/0	0/1	0/0	1/1	./.	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0
+3	16576245	SNP-3.16574889.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Cag/Gag|p.Gln339Glu/c.1015A>G|561|LOC_Os03g29170|protein_coding|CODING|LOC_Os03g29170.1|7|1|WARNING_REF_DOES_NOT_MATCH_GENOME),missense_variant(MODERATE|MISSENSE|Cag/Gag|p.Gln339Glu/c.1015A>G|474|LOC_Os03g29170|protein_coding|CODING|LOC_Os03g29170.2|7|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1
+3	16586851	SNP-3.16585495.	C	A	.	.	PR;EFF=5_prime_UTR_premature_start_codon_gain_variant(LOW||||51|LOC_Os03g29184|protein_coding|CODING|LOC_Os03g29184.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),5_prime_UTR_variant(MODIFIER||2|c.-2G>T|51|LOC_Os03g29184|protein_coding|CODING|LOC_Os03g29184.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	./.	./.	1/1	1/1	0/0	0/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0
+3	16589439	SNP-3.16588083.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	./.	1/1	./.	0/1	1/1	0/1	0/0	1/1	1/1	1/1	0/1	./.	0/1	0/1	./.	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/1	0/1	0/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	./.	0/1	0/0	1/1	1/1	0/0	0/1	0/0	0/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1
+3	16589518	SNP-3.16588162.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	0/0	0/1	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	./.	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/0	./.	0/1	./.	./.	0/0	0/1	1/1	0/0	1/1	1/1	1/1	0/1	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/1	0/1	./.	0/0	0/0	./.	0/1	0/0	./.	1/1	0/0	1/1	0/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	./.	0/0	0/0
+3	16589605	SNP-3.16588249.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0	1/1	./.	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	0/1	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0
+3	16589757	SNP-3.16588401.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	1/1	1/1	./.	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0
+3	16590643	SNP-3.16589287.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.78+295A>G|588|LOC_Os03g29190|protein_coding|CODING|LOC_Os03g29190.1|1|1),intron_variant(MODIFIER|||c.78+295A>G|569|LOC_Os03g29190|protein_coding|CODING|LOC_Os03g29190.2|1|1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1
+3	16591121	SNP-3.16589765.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.78+773A>G|588|LOC_Os03g29190|protein_coding|CODING|LOC_Os03g29190.1|1|1),intron_variant(MODIFIER|||c.78+773A>G|569|LOC_Os03g29190|protein_coding|CODING|LOC_Os03g29190.2|1|1)	GT	./.	0/0	./.	0/0	0/0	./.	./.	./.	./.	0/0	./.	./.	1/1	1/1	./.	0/0	./.	1/1	0/0	./.	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	./.	0/0	1/1	1/1	./.	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/1	1/1	0/0	./.	./.	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/1	0/1	./.	0/0	0/0	./.	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	1/1	0/0	./.	./.	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	./.	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	./.	0/0	./.	1/1	1/1	0/0	1/1
+3	16594838	SNP-3.16593482.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.1111-150C>A|588|LOC_Os03g29190|protein_coding|CODING|LOC_Os03g29190.1|4|1),intron_variant(MODIFIER|||c.1054-150C>A|569|LOC_Os03g29190|protein_coding|CODING|LOC_Os03g29190.2|3|1)	GT	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	1/1	0/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	./.	0/1	0/0	./.	0/0	0/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	./.	./.	./.	0/0	0/0	./.	0/0	./.	0/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	./.	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/1	0/0	0/1	./.	./.	0/0	./.	0/1	0/0	0/1	./.	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	./.	0/0	1/1	./.	./.	0/0	0/1	0/0	0/0	0/1	./.	0/0	0/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	./.	./.	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	./.	1/1	0/0	0/0	./.	1/1	0/0
+3	16598761	SNP-3.16597405.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	./.	1/1	./.	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1
+3	16599384	SNP-3.16598028.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	16600374	SNP-3.16599018.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.97-380T>C|163|LOC_Os03g29194|protein_coding|CODING|LOC_Os03g29194.1|3|1)	GT	0/0	1/1	0/0	0/0	./.	./.	0/0	./.	./.	./.	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	./.	./.	./.	1/1	1/1	1/1	./.	1/1	./.	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/0	./.	./.	./.	1/1	./.	1/1	0/0	./.	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0
+3	16600820	SNP-3.16599464.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.96+593G>T|163|LOC_Os03g29194|protein_coding|CODING|LOC_Os03g29194.1|3|1)	GT	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	1/1	0/1	0/1	./.	1/1	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0
+3	16600952	SNP-3.16599596.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.96+461T>C|163|LOC_Os03g29194|protein_coding|CODING|LOC_Os03g29194.1|3|1)	GT	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	0/0	0/0
+3	16601019	SNP-3.16599663.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.96+394G>T|163|LOC_Os03g29194|protein_coding|CODING|LOC_Os03g29194.1|3|1)	GT	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	./.	0/0	0/1	1/1	0/1	0/1	0/0	./.	0/1	0/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	./.	1/1	0/1	1/1	0/0	0/0	1/1	0/1	1/1	1/1	0/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/1	1/1	0/1	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	16601645	SNP-3.16600289.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.60+53T>C|163|LOC_Os03g29194|protein_coding|CODING|LOC_Os03g29194.1|2|1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	1/1	0/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/1	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	./.	0/1	0/1	0/0	0/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	16602272	SNP-3.16600916.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/1	1/1	0/0
+3	16608415	SNP-3.16607059.	A	G	.	.	PR;EFF=synonymous_variant(LOW||Ggt/Ggt|p.Gly235Gly/c.703A>G|517|LOC_Os03g29212|protein_coding|CODING|LOC_Os03g29212.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	0/0	0/0	0/0	./.	0/1	0/1	0/1	0/0	0/1	0/0	./.	0/0	./.	1/1	0/0	0/0	0/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/0	1/1	1/1	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	1/1	./.	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	./.	./.	1/1	0/0	1/1
+3	16608823	SNP-3.16607467.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.864+247A>G|517|LOC_Os03g29212|protein_coding|CODING|LOC_Os03g29212.1|2|1)	GT	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/1	./.	0/0	./.	1/1	0/0	0/0	./.	1/1	1/1	0/0	0/1	0/1	0/0	1/1	1/1	0/1	./.	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	./.	0/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	./.	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1
+3	16609108	SNP-3.16607752.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.865-175C>A|517|LOC_Os03g29212|protein_coding|CODING|LOC_Os03g29212.1|2|1)	GT	1/1	0/0	0/0	0/1	0/0	0/0	0/1	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	./.	0/0	./.	0/0	0/1	0/0	1/1	1/1	./.	1/1	1/1	0/1	0/1	1/1	./.	1/1	./.	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/1	0/0	./.	0/0	0/0	1/1	./.	1/1	./.	1/1	./.	./.	0/0	./.	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1
+3	16609519	SNP-3.16608163.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.1009+59A>G|517|LOC_Os03g29212|protein_coding|CODING|LOC_Os03g29212.1|4|1)	GT	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	1/1	1/1	./.	./.	1/1	0/0	./.	./.	1/1	./.	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	./.	1/1	./.	1/1	0/0	./.	./.	./.	0/0	./.	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	./.	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1
+3	16612026	SNP-3.16610670.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/1	./.	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/1	./.	0/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	./.	0/1	1/1	./.	1/1	0/0	0/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/1	1/1	0/1	./.	0/0	1/1	1/1	0/0	./.	1/1	0/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0
+3	16612581	SNP-3.16611225.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/1	./.	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	0/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0
+3	16612603	SNP-3.16611247.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/1	1/1	0/0	0/0	./.	./.	./.	0/0	0/0	./.	./.	0/0	1/1	0/1	0/0	0/0	1/1	1/1	0/0	0/1	./.	./.	1/1	0/0	0/0	0/0	1/1	./.	0/0	./.	./.	0/1	./.	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	1/1	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	./.	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0
+3	16613494	SNP-3.16612138.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/1	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	./.	1/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	./.	0/0
+3	16614917	SNP-3.16613561.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	./.	0/0	1/1	./.	./.	0/0	1/1	1/1	0/0	./.	0/0	./.	0/0	./.	./.	0/0	1/1	./.	./.	1/1	1/1	0/0	./.	0/0	./.	1/1	./.	1/1	./.	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	./.	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	./.	0/0	./.	0/0	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	16626255	SNP-3.16624899.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0
+3	16626456	SNP-3.16625100.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0
+3	16627656	SNP-3.16626300.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	0/0	1/1	0/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0
+3	16629653	SNP-3.16628297.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|tcA/tcG|p.Ser106Ser/c.318A>G|581|LOC_Os03g29240|protein_coding|CODING|LOC_Os03g29240.1|2|1)	GT	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	./.	./.	./.	1/1	0/0	1/1	./.	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	./.	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	./.	./.	1/1	1/1	1/1	0/0	0/0	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/1	./.	1/1	1/1	1/1	./.	1/1
+3	16629905	SNP-3.16628549.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|acC/acA|p.Thr190Thr/c.570C>A|581|LOC_Os03g29240|protein_coding|CODING|LOC_Os03g29240.1|2|1)	GT	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	16630371	SNP-3.16629015.	A	G	.	.	PR;EFF=synonymous_variant(LOW||gGt/gGt|p.Gly315Gly/c.944A>G|581|LOC_Os03g29240|protein_coding|CODING|LOC_Os03g29240.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1
+3	16630882	SNP-3.16629526.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.1075-247C>A|581|LOC_Os03g29240|protein_coding|CODING|LOC_Os03g29240.1|3|1)	GT	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0
+3	16633913	SNP-3.16632557.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	./.	./.	0/0	0/0	1/1	0/0	./.	./.	1/1	1/1	./.	0/0	0/0	1/1	./.	0/0	0/0	./.	./.	./.	0/0	./.	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/1	0/0	0/0	1/1	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	0/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	./.	1/1	1/1	./.	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	./.	0/1	0/0	0/0	./.	./.	./.	./.	0/1	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	./.	0/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/1	./.	./.	0/0	0/0	0/1	0/0	0/1	1/1	./.	0/0	./.	0/1	0/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	0/0	1/1	0/0
+3	16635723	SNP-3.16634367.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0
+3	16636564	SNP-3.16635208.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0
+3	16636964	SNP-3.16635608.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	./.	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/1	1/1	./.	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	16638512	SNP-3.16637156.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1
+3	16638642	SNP-3.16637286.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	./.	0/0	1/1	./.	0/0	0/1	1/1	0/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	1/1	0/0	./.	./.	1/1	./.	0/1	1/1	0/0	0/0	1/1	0/1	./.	0/0	1/1	1/1	1/1	./.	0/0	1/1	./.	1/1	0/1	1/1	0/1	1/1	./.	./.	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0	0/1	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/1	1/1	0/1	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/1	./.	0/0	1/1	1/1	0/0	1/1	0/1	0/0	./.	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	0/1	0/0	0/0	./.	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	./.	1/1	0/0	1/1	./.	0/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1
+3	16639411	SNP-3.16638055.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	0/0	./.	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/1	0/0	0/0	./.	0/1	0/1	0/0	0/1	0/1	0/0	0/0	./.	0/1	0/1	0/0	0/1	0/1	0/1	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	./.	0/1	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/1	./.	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	1/1	0/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	0/0	0/0	0/0	./.	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1
+3	16642376	SNP-3.16641020.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	1/1	0/0	./.	./.	./.	1/1	1/1	./.	0/0	./.	1/1	0/0	./.	1/1	0/0	1/1	./.	0/1	1/1	./.	1/1	0/0	1/1	0/0	0/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	./.	0/1	./.	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	1/1	./.	0/0	./.	./.	0/0	./.	./.	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	1/1	0/0	1/1	0/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	./.	./.	0/0	1/1	./.	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	./.	./.	./.	./.	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0	0/0
+3	16643300	SNP-3.16641944.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/1	1/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0
+3	16643982	SNP-3.16642626.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	1/1	./.	0/0	1/1	0/0	./.	0/0	./.	./.	./.	./.	1/1	1/1	0/0	./.	1/1	0/0	1/1	0/0	./.	1/1	./.	./.	0/0	1/1	1/1	1/1	0/0	1/1	./.	./.	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	1/1	1/1	./.	./.	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	1/1	1/1	0/0	0/1	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	./.	./.	1/1	./.	0/0	0/0	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	1/1	./.	./.	1/1	0/0	1/1	0/1	./.	./.	./.	0/0	1/1	./.	1/1	1/1	0/0	./.	1/1	./.	1/1	./.	./.	1/1	./.	./.	./.	./.	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/0	1/1	./.	./.	./.	1/1	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	1/1	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	1/1	./.	./.	0/0	1/1	1/1	./.	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1
+3	16646620	SNP-3.16645264.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	1/1	./.	0/0	1/1	./.	1/1	1/1	1/1	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	./.	./.	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	16647194	SNP-3.16645838.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0
+3	16647665	SNP-3.16646309.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/1	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	16650006	SNP-3.16648650.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/1	./.	0/0	0/0	./.	./.	0/0	0/0	0/1	./.	./.	0/0	1/1	0/1	0/0	./.	1/1	0/0	./.	0/0	0/1	1/1	1/1	0/1	0/0	1/1	1/1	1/1	0/0	0/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	1/1	1/1	./.	./.	1/1	./.	1/1	0/0	1/1	0/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	1/1	0/0	0/1	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/1	1/1	./.	1/1	0/1	./.	./.	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	./.	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	./.	1/1	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	./.	0/0	0/0	./.	1/1	./.	0/0	./.	./.	0/0	1/1	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1
+3	16650432	SNP-3.16649076.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	0/0	1/1	./.	0/0	0/1	1/1	./.	./.	0/0	1/1	1/1	0/0	./.	1/1	0/0	0/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	0/1	./.	0/0	0/0	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	1/1	./.	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1
+3	16652819	SNP-3.16651463.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	1/1	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	./.	./.	./.	./.	1/1	./.	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	./.	0/0	./.	1/1	0/0	./.	1/1	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	1/1	./.	0/0	./.	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	0/0	./.	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	1/1	1/1	./.	./.	0/0	0/0	0/0	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0
+3	16654501	SNP-3.16653145.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.-1+31C>A|226|LOC_Os03g29260|protein_coding|CODING|LOC_Os03g29260.2|1|1)	GT	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	0/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/1	0/1	0/0	1/1	1/1	0/1	./.	0/1	0/0	0/1	1/1	0/1	1/1	1/1	0/1	0/1	1/1	1/1	./.	1/1	1/1	./.	0/1	1/1	1/1	0/0	./.	0/0	1/1	./.	1/1	./.	1/1	./.	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	./.	0/0	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/0	./.	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0
+3	16655352	SNP-3.16653996.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.87-15C>A|226|LOC_Os03g29260|protein_coding|CODING|LOC_Os03g29260.2|2|1)	GT	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	1/1	1/1	0/0	0/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	16659023	SNP-3.16657667.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/1	0/1	0/1	0/0	./.	0/1	0/0	0/0	0/1	0/1	0/1	0/0	0/1	0/1	0/0	0/1	0/1	0/0	0/1	0/0	0/1	./.	0/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/1	0/0	1/1	1/1	0/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/1	0/1	0/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/1	1/1	0/1	0/1	0/1	0/1	1/1	0/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	./.	0/0	0/0	0/1	./.	./.	0/0	./.	./.	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/1
+3	16659994	SNP-3.16658638.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0
+3	16661316	SNP-3.16659960.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.838-331T>C|355|LOC_Os03g29270|protein_coding|CODING|LOC_Os03g29270.1|3|1)	GT	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/1	1/1	1/1	0/0	1/1	0/1	0/0	0/0	0/1	0/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	0/1	0/0	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/1	1/1	0/0	1/1
+3	16662852	SNP-3.16661496.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|tcA/tcC|p.Ser11Ser/c.33T>C|355|LOC_Os03g29270|protein_coding|CODING|LOC_Os03g29270.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0
+3	16668298	SNP-3.16666942.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	./.	0/0	0/0	1/1	./.	1/1	./.	./.	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	./.	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	./.	./.	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	1/1	0/0	1/1	1/1	0/0	1/1
+3	16670653	SNP-3.16669297.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	16671466	SNP-3.16670110.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	./.	0/0	0/1	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	./.	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	16671695	SNP-3.16670339.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	./.	./.	0/0	1/1	0/0	./.	./.	./.	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	./.	1/1	0/1	./.	1/1	1/1	0/1	./.	./.	./.	0/1	1/1	1/1	./.	./.	./.	./.	./.	0/1	./.	./.	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	./.	./.	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	1/1	0/0	./.	./.	0/0	./.
+3	16679391	SNP-3.16678035.	C	A	.	.	PR;EFF=synonymous_variant(LOW||cTc/cTc|p.Leu154Leu/c.461G>T|911|LOC_Os03g29290|protein_coding|CODING|LOC_Os03g29290.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	16682908	SNP-3.16681552.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|tcG/tcC|p.Ser512Ser/c.1536T>C|859|LOC_Os03g29310|protein_coding|CODING|LOC_Os03g29310.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	1/1	0/0	0/1	./.	0/0	./.	1/1	0/0	./.	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	1/1	1/1	./.	1/1	0/0	./.	0/1	0/0	1/1	./.	1/1	./.	1/1	./.	0/0	0/1	./.	0/0	0/0	0/1	./.	./.	0/0	0/0	./.	./.	0/0	./.	./.	./.	./.	./.	1/1	0/0	1/1	1/1	./.	1/1	./.	0/0	./.	1/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	./.	1/1	0/0	./.	0/1	./.	0/0	1/1	0/0	0/1	0/0	1/1	./.	./.	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	./.	./.	0/0	1/1	1/1	0/0	1/1	./.	./.	1/1	0/0	1/1	./.	./.	./.	./.	./.	./.	./.	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1
+3	16685894	SNP-3.16684538.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	0/0	0/0
+3	16685989	SNP-3.16684633.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	./.	./.	1/1	0/0	./.	0/0	./.	1/1	./.	1/1	1/1	1/1	./.	./.	./.	1/1	./.	./.	0/0	./.	1/1	0/0	1/1	./.	./.	./.	./.	1/1	1/1	./.	./.	./.	1/1	./.	./.	./.	./.	./.	1/1	1/1	1/1	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	./.	0/0	./.	./.	./.	./.	1/1	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	0/0	./.	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	./.	./.	./.	0/0	./.	./.	0/0	0/0	./.	./.	1/1	./.	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.
+3	16688049	SNP-3.16686693.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	1/1	0/0	1/1	0/1	1/1	1/1	0/1	0/0	0/0	./.	0/0	0/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/1	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0
+3	16688126	SNP-3.16686770.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	16692659	SNP-3.16691304.	C	A	.	.	PR;EFF=5_prime_UTR_variant(MODIFIER||395|c.-75C>A|463|LOC_Os03g29340|protein_coding|CODING|LOC_Os03g29340.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),5_prime_UTR_variant(MODIFIER||395|c.-155C>A|449|LOC_Os03g29340|protein_coding|CODING|LOC_Os03g29340.2|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/0	0/1	0/1	0/1	0/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/1	0/1	./.	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	./.	0/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	./.	0/0
+3	16694934	SNP-3.16693579.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.585-112A>G|449|LOC_Os03g29340|protein_coding|CODING|LOC_Os03g29340.2|6|1),intron_variant(MODIFIER|||c.594-79A>G|463|LOC_Os03g29340|protein_coding|CODING|LOC_Os03g29340.1|6|1)	GT	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	0/0	./.	1/1	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	./.	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/1	1/1	1/1	0/0	0/0
+3	16705256	SNP-3.16703901.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	1/1	./.	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	16705740	SNP-3.16704385.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	./.	./.	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	0/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	16705901	SNP-3.16704546.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	0/0	0/1	0/1	./.	./.	0/0	1/1	./.	0/0	0/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	1/1	0/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	1/1	1/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0
+3	16708508	SNP-3.16707153.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	16709942	SNP-3.16708587.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	./.	1/1	0/1	0/0	1/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	1/1	0/0
+3	16711077	SNP-3.16709722.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/1	1/1	0/0	1/1	./.	0/0	0/0	./.	1/1	1/1	./.	0/1	0/1	0/0	0/1	./.	0/0	0/1	1/1	1/1	0/1	./.	0/0	1/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/1	1/1	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	./.	0/0	0/1	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	0/1	./.	./.	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	./.	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/1	0/0	0/0	0/1	1/1	1/1	0/0	0/1	0/1	0/0	0/0	0/0	1/1	0/0	./.	./.	./.	0/0	1/1	1/1	1/1	0/0	0/0	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0
+3	16711383	SNP-3.16710028.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	./.	0/0	./.	0/0	0/1	0/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/1	0/0	1/1	0/0
+3	16712609	SNP-3.16711254.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	./.	./.	1/1	./.	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	./.	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	./.	1/1	./.	0/0	0/0	./.	./.	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	./.	1/1	./.	./.	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0
+3	16713722	SNP-3.16712367.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/1	./.	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/1	0/0	./.	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	./.	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1
+3	16713855	SNP-3.16712500.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	./.	0/1	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0	./.	0/0	./.	0/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	16713877	SNP-3.16712522.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	./.	0/0	1/1	1/1	./.	./.	./.	0/0	0/0	./.	1/1	./.	0/0	./.	1/1	0/0	1/1	./.	0/0	0/1	./.	./.	./.	./.	0/1	./.	0/0	./.	0/0	1/1	0/0	./.	./.	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	./.	0/1	1/1	./.	1/1	0/1	1/1	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	./.	./.	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/1	./.	0/0	0/0
+3	16717631	SNP-3.16716276.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/1	0/1	./.	1/1	./.	0/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/1	1/1	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	16718155	SNP-3.16716800.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/1	0/0	0/0	./.	./.	./.	./.	0/0	0/0	0/0	./.	./.	./.	0/0	./.	0/0	0/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/1	./.	1/1	1/1	1/1	./.	./.	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	./.	0/1	./.	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1
+3	16719368	SNP-3.16718013.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	16724730	SNP-3.16723375.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	./.	./.	./.	./.	./.	0/0	1/1	0/0	./.	./.	./.	./.	./.	0/0	./.	0/0	./.	./.	0/0	0/0	0/1	./.	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	1/1	./.	0/0	./.	./.	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	./.	./.	./.	./.	./.	1/1	./.	1/1	0/0	./.	0/0	0/1	0/0	./.	1/1	./.	./.	./.	./.	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	./.	./.	./.	./.	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	./.	1/1	0/0	1/1	1/1	0/0	1/1
+3	16726214	SNP-3.16724859.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	1/1	1/1	./.	./.	./.	1/1	0/0	./.	1/1	./.	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	./.	./.	./.	1/1	0/0	./.	0/0	./.	1/1	./.	1/1	./.	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	./.	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	./.	./.	1/1	1/1	./.	./.	./.	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	./.	./.	./.	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.
+3	16726980	SNP-3.16725625.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/1	./.	0/1	1/1	0/1	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1
+3	16733773	SNP-3.16732418.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	./.	./.	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	0/0	./.	./.	1/1	./.	./.	0/0	1/1	0/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	./.	./.	1/1	0/0	./.	0/0	1/1	./.	0/0	./.	1/1	0/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	1/1	./.	1/1	./.	0/0	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1
+3	16736480	SNP-3.16735125.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	1/1	0/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/1	1/1	./.	1/1	./.	0/0	1/1	1/1	1/1	./.	0/1	0/0	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	./.	1/1	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/1	0/1	1/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/1	0/0	./.	0/1	0/1	0/0	./.	0/0	1/1	0/0	0/1	./.	./.	1/1	0/1	0/1	0/0	1/1	0/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/1	0/0	1/1
+3	16737323	SNP-3.16735968.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1
+3	16738150	SNP-3.16736795.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/1	0/0	1/1	0/0	0/0	0/1	0/0
+3	16738536	SNP-3.16737181.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	./.	0/0	1/1	./.	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/1	0/0	0/0	./.	0/1	./.	0/0	0/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/1	0/0	1/1
+3	16739478	SNP-3.16738123.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	./.	1/1	1/1	0/0	./.	0/0	./.	1/1	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	16740928	SNP-3.16739573.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.97+52T>C|107|LOC_Os03g29389|protein_coding|CODING|LOC_Os03g29389.1|1|1)	GT	./.	0/0	1/1	0/0	./.	0/1	0/0	0/0	./.	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	1/1	./.	./.	1/1	./.	1/1	./.	1/1	1/1	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/1	1/1	./.	0/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/1	./.	0/0	./.	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	1/1	1/1	0/1	0/0	0/0	./.	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	1/1	1/1	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	./.	1/1	./.	./.	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0
+3	16741152	SNP-3.16739797.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	./.	./.	1/1	0/0	1/1	0/0	1/1	./.	./.	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	./.	./.	1/1	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	1/1	./.	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1
+3	16741191	SNP-3.16739836.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	./.	0/0	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	1/1	0/0
+3	16742631	SNP-3.16741276.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/1	./.	0/0	./.	0/1	./.	0/0	0/0	0/1	1/1	0/0	./.	0/0	./.	./.	./.	0/0	0/0	1/1	0/1	./.	0/0	0/1	1/1	1/1	./.	0/0	0/0	0/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	0/1	0/0	./.	0/1	0/1	0/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	1/1	1/1	1/1	0/1	1/1	./.	./.	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/1	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	./.	1/1	./.	0/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	./.	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	./.	0/0	1/1	./.	0/0	1/1
+3	16745344	SNP-3.16743989.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	./.	0/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	1/1	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/1	0/0	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1
+3	16746102	SNP-3.16744747.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	./.	1/1	1/1	0/0	1/1	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	./.	./.	0/0	./.	./.	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	./.	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	./.	1/1	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	./.	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0
+3	16747632	SNP-3.16746277.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	./.	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/1	0/0	./.	0/1	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/1	0/0	0/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	1/1	1/1	0/0	0/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	1/1	0/0	0/1	./.	./.	0/0	1/1	1/1	0/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1
+3	16749510	SNP-3.16748155.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|tGc/tTc|p.Cys500Phe/c.1499G>T|500|LOC_Os03g29410|protein_coding|CODING|LOC_Os03g29410.1|5|1)	GT	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	16749956	SNP-3.16748601.	C	A	.	.	PR;EFF=synonymous_variant(LOW||gcT/gcT|p.Ala351Ala/c.1053G>T|500|LOC_Os03g29410|protein_coding|CODING|LOC_Os03g29410.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	./.	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/0	1/1	0/0
+3	16753383	SNP-3.16752028.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.583-20G>T|500|LOC_Os03g29410|protein_coding|CODING|LOC_Os03g29410.1|1|1)	GT	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	16754512	SNP-3.16753157.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/1	0/1	0/0	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	./.	0/1	0/0	0/1	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/1	0/1	1/1	./.	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	1/1	0/0	1/1	1/1	0/0	0/0
+3	16757648	SNP-3.16756293.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/1	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	./.	./.	./.	0/0	0/1	./.	./.	0/0	0/1	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	./.	0/0	1/1	1/1	0/0	0/0	1/1	0/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/1	0/0	0/0	1/1	./.	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	16760451	SNP-3.16759096.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	0/1	./.	./.	./.	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	0/0	1/1	0/0	1/1	0/0	./.	0/1	./.	0/0	./.	./.	0/1	0/0	1/1	0/0	./.	0/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0
+3	16763096	SNP-3.16761741.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/1	1/1	1/1	1/1	0/1	0/0	./.	1/1	1/1	./.	./.	1/1	./.	0/1	0/1	0/1	1/1	./.	0/1	0/1	0/1	./.	1/1	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/1	./.	./.	1/1	1/1	0/1	1/1	0/0	1/1	0/0	./.	0/0	./.	1/1	1/1	./.	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	0/0	0/0	./.	1/1	1/1	./.	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	./.	0/0	./.	1/1	0/0	1/1	1/1	0/0	1/1
+3	16766719	SNP-3.16765364.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	1/1
+3	16775485	SNP-3.16774358.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0
+3	16777112	SNP-3.16775985.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/1	0/0	0/0	0/0	1/1	./.	0/0	0/1	0/0	./.	./.	./.	./.	0/1	./.	0/0	0/0	1/1	1/1	./.	0/0	./.	1/1	1/1	./.	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	./.	./.	0/1	./.	0/1	1/1	./.	0/0	0/0	0/0	0/0	0/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/1	0/1	./.	0/0	0/1	0/0	0/1	./.	0/0	./.	0/1	0/0	0/1	0/0	0/1	0/0	0/1	0/0	0/0	0/1	0/0	0/0	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/1	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1
+3	16777397	SNP-3.16776270.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0
+3	16777506	SNP-3.16776379.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1
+3	16777607	SNP-3.16776480.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	./.	./.	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	./.	0/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	16779274	SNP-3.16778147.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|tTt/tGt|p.Phe102Cys/c.305A>G|818|LOC_Os03g29440|protein_coding|CODING|LOC_Os03g29440.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	1/1
+3	16779316	SNP-3.16778189.	A	G	.	.	PR;EFF=synonymous_variant(LOW||cGg/cGg|p.Arg116Arg/c.347A>G|818|LOC_Os03g29440|protein_coding|CODING|LOC_Os03g29440.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	./.	1/1	1/1	0/0	0/1	0/0	1/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1
+3	16779367	SNP-3.16778240.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|tTt/tGt|p.Phe133Cys/c.398A>G|818|LOC_Os03g29440|protein_coding|CODING|LOC_Os03g29440.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	./.	./.	./.	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	./.	1/1	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	./.	./.	./.	./.	0/0	1/1	0/0	0/0	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1
+3	16779761	SNP-3.16778634.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|caC/caG|p.His228Gln/c.684A>G|818|LOC_Os03g29440|protein_coding|CODING|LOC_Os03g29440.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	1/1	1/1	1/1	0/0	./.	1/1	1/1	./.	./.	1/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/1	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0
+3	16779862	SNP-3.16778735.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aTa/aAa|p.Ile262Lys/c.785C>A|818|LOC_Os03g29440|protein_coding|CODING|LOC_Os03g29440.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	16780004	SNP-3.16778877.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aaT/aaG|p.Asn309Lys/c.927A>G|818|LOC_Os03g29440|protein_coding|CODING|LOC_Os03g29440.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1
+3	16780112	SNP-3.16778985.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|tgC/tgG|p.Cys345Trp/c.1035A>G|818|LOC_Os03g29440|protein_coding|CODING|LOC_Os03g29440.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1
+3	16780429	SNP-3.16779302.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cCa/cGa|p.Pro403Arg/c.1208A>G|818|LOC_Os03g29440|protein_coding|CODING|LOC_Os03g29440.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0
+3	16780471	SNP-3.16779344.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aCg/aAg|p.Thr417Lys/c.1250C>A|818|LOC_Os03g29440|protein_coding|CODING|LOC_Os03g29440.1|3|1)	GT	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0
+3	16780558	SNP-3.16779431.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aCa/aGa|p.Thr446Arg/c.1337A>G|818|LOC_Os03g29440|protein_coding|CODING|LOC_Os03g29440.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	./.	./.	1/1	./.	0/0	0/1	./.	0/0	0/0	./.	./.	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/1	0/0	./.	1/1	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	0/0	./.	1/1
+3	16780639	SNP-3.16779512.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aTg/aGg|p.Met473Arg/c.1418A>G|818|LOC_Os03g29440|protein_coding|CODING|LOC_Os03g29440.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1
+3	16780671	SNP-3.16779544.	C	A	.	.	PR;EFF=synonymous_variant(LOW||Agg/Agg|p.Arg484Arg/c.1450C>A|818|LOC_Os03g29440|protein_coding|CODING|LOC_Os03g29440.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	16780741	SNP-3.16779614.	A	G	.	.	PR;EFF=synonymous_variant(LOW||tGg/tGg|p.Trp507Trp/c.1520A>G|818|LOC_Os03g29440|protein_coding|CODING|LOC_Os03g29440.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	./.	./.	0/1	./.	./.	./.	./.	0/1	0/0	0/0	0/0	0/0	./.	./.	0/1	0/0	0/0	./.	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	0/1	./.	./.	./.	./.	1/1	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/1	./.	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/1	1/1	0/1	1/1	./.	0/0	./.	0/0	0/1	0/0	./.	0/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	0/0	./.	0/0	0/0	./.	0/0	./.	0/1	./.	./.	1/1	0/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	./.
+3	16780915	SNP-3.16779788.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cTa/cAa|p.Leu565Gln/c.1694C>A|818|LOC_Os03g29440|protein_coding|CODING|LOC_Os03g29440.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/1	0/0	0/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	./.	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/0	0/0	1/1	0/0
+3	16781002	SNP-3.16779875.	A	G	.	.	PR;EFF=synonymous_variant(LOW||cGg/cGg|p.Arg594Arg/c.1781A>G|818|LOC_Os03g29440|protein_coding|CODING|LOC_Os03g29440.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1
+3	16781077	SNP-3.16779950.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aCa/aGa|p.Thr619Arg/c.1856A>G|818|LOC_Os03g29440|protein_coding|CODING|LOC_Os03g29440.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	1/1	0/0	0/1	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	16781257	SNP-3.16780130.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gTa/gGa|p.Val679Gly/c.2036A>G|818|LOC_Os03g29440|protein_coding|CODING|LOC_Os03g29440.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1
+3	16781605	SNP-3.16780478.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gAa/gGa|p.Glu795Gly/c.2384A>G|818|LOC_Os03g29440|protein_coding|CODING|LOC_Os03g29440.1|3|1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1
+3	16784936	SNP-3.16783809.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	./.	./.	1/1	0/0	0/0	0/1	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	0/1	0/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	./.	1/1	1/1	0/1	0/0	1/1	./.	1/1	./.	0/1	./.	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/1	./.	1/1	0/0	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/0	1/1	0/0
+3	16789370	SNP-3.16788243.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/1	./.	./.	0/0	0/0	0/0	0/1	0/0	0/1	0/1	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	0/1	0/1	0/0	./.	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/1	0/0	0/0	./.	0/1	0/1	1/1	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0
+3	16791091	SNP-3.16789964.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/1	1/1	0/0	1/1	1/1	./.	1/1	./.	0/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	1/1	./.	0/0	./.	./.	./.	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	1/1	0/0
+3	16791407	SNP-3.16790280.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	16793197	SNP-3.16792070.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	0/0	1/1	0/0	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	./.	0/0	1/1	./.	./.	./.	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	0/0	./.	./.	./.	1/1	0/0	1/1	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	16796885	SNP-3.16795758.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.340-1744A>G|224|LOC_Os03g29470|protein_coding|CODING|LOC_Os03g29470.1|1|1)	GT	0/0	0/0	./.	./.	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/1	1/1	1/1	1/1	./.	0/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/1	1/1	0/1	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	16798362	SNP-3.16797235.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.340-267A>G|224|LOC_Os03g29470|protein_coding|CODING|LOC_Os03g29470.1|1|1)	GT	0/0	0/1	0/0	./.	0/1	0/0	./.	0/0	0/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0
+3	16801060	SNP-3.16799933.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	./.	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	./.	./.	1/1	1/1	1/1	./.	./.	0/0	1/1	./.	1/1	./.	1/1	./.	./.	0/0	1/1	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	./.	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	1/1	0/0	./.	./.	1/1	0/0	./.	1/1	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	./.	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1
+3	16807398	SNP-3.16806271.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/1	0/0	0/1	0/1	1/1	0/1	./.	0/0	1/1	0/0	./.	0/1	0/1	0/0	0/0	0/1	0/0	0/1	0/1	0/0	0/0	1/1	0/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	0/0	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/1	0/1	1/1	0/0	1/1	0/1	0/0	0/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/1	./.	./.	0/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/1	0/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	./.	0/0
+3	16807958	SNP-3.16806831.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/1	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	0/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1
+3	16811339	SNP-3.16810212.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Ttt/Gtt|p.Phe72Val/c.214A>G|128|LOC_Os03g29490|protein_coding|CODING|LOC_Os03g29490.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	16817640	SNP-3.16816513.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.58+273T>C|99|LOC_Os03g29510|protein_coding|CODING|LOC_Os03g29510.1|1|1)	GT	0/0	0/0	./.	./.	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	./.	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	./.	1/1	0/0	./.	1/1	1/1	./.	1/1	1/1	./.	0/0	./.	./.	./.	./.	1/1	1/1	./.	1/1	1/1	0/0	1/1	./.	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	./.	./.	0/0	1/1	./.	./.	./.	./.	0/0	./.	./.	./.	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	./.	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	0/0	./.	./.	0/0	0/0	0/0	1/1	./.	1/1	0/0	./.	./.	1/1	0/0	1/1	0/0	./.	0/0	./.	1/1	1/1	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0
+3	16817724	SNP-3.16816597.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.58+189T>C|99|LOC_Os03g29510|protein_coding|CODING|LOC_Os03g29510.1|1|1)	GT	0/0	0/0	./.	./.	1/1	./.	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	./.	1/1	0/0	./.	1/1	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	./.	0/0	./.	0/0	./.	1/1	./.	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	0/0	1/1	./.	1/1	./.	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	./.	./.	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0
+3	16818214	SNP-3.16817087.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	0/1	0/1	0/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	1/1	0/0	1/1	./.	./.	0/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	16820497	SNP-3.16819370.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	1/1	0/0	./.	0/0	./.	./.	0/0	0/0	./.	./.	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	1/1	./.	1/1	1/1	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	16820716	SNP-3.16819589.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	16820765	SNP-3.16819638.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	0/0	1/1	./.	./.	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	./.	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.
+3	16822183	SNP-3.16821056.	C	A	.	.	PR;EFF=synonymous_variant(LOW||atT/atT|p.Ile1492Ile/c.4476G>T|1922|LOC_Os03g29520|protein_coding|CODING|LOC_Os03g29520.1|10|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	0/1	./.	0/1	0/1	0/1	1/1	1/1	./.	1/1	1/1	0/1	./.	0/1	./.	0/0	./.	1/1	1/1	0/0	0/1	0/0	1/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	./.	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0
+3	16822258	SNP-3.16821131.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|agA/agT|p.Arg1467Ser/c.4401G>T|1922|LOC_Os03g29520|protein_coding|CODING|LOC_Os03g29520.1|10|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	1/1	0/1	0/1	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	0/1	./.	0/1	0/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	0/1	0/1	0/1	0/1	1/1	./.	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	16822481	SNP-3.16821354.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gAc/gCc|p.Asp1393Ala/c.4178T>C|1922|LOC_Os03g29520|protein_coding|CODING|LOC_Os03g29520.1|10|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	./.	1/1	0/0	./.	./.	0/0	0/0	0/0	./.	1/1	./.	0/0	1/1	./.	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	./.	./.	./.	1/1	0/0	0/0	0/0	./.	1/1	./.	./.	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	./.	./.	./.	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1
+3	16822667	SNP-3.16821540.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.4124-132T>C|1922|LOC_Os03g29520|protein_coding|CODING|LOC_Os03g29520.1|9|1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/1	0/1	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/1	0/0	0/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	0/0	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	0/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	16824914	SNP-3.16823787.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cAc/cTc|p.His1152Leu/c.3455G>T|1922|LOC_Os03g29520|protein_coding|CODING|LOC_Os03g29520.1|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	1/1	0/0	1/1	1/1	0/0	./.	1/1	./.	0/0	./.	0/0	./.	./.	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	./.	1/1	./.	./.	0/0	./.	1/1	./.	1/1	./.	./.	0/0	1/1	./.	0/0	./.	1/1	./.	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	./.	./.	./.	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	1/1	0/0
+3	16826960	SNP-3.16825833.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gTt/gCt|p.Val673Ala/c.2018T>C|1922|LOC_Os03g29520|protein_coding|CODING|LOC_Os03g29520.1|2|1)	GT	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	1/1	./.	0/0	./.	0/0	1/1	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	./.	./.	./.	./.	0/0	1/1	./.	./.	./.	./.	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	./.	./.	0/0	1/1	./.	./.	1/1	./.	./.	./.	./.	./.	./.	1/1	./.	./.	1/1	1/1	1/1	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	./.	./.	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	./.	./.	0/0	0/0	1/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	1/1	1/1	./.	1/1	./.	0/0	./.	./.	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.
+3	16827601	SNP-3.16826474.	C	A	.	.	PR;EFF=synonymous_variant(LOW||gaT/gaT|p.Asp509Asp/c.1527G>T|1922|LOC_Os03g29520|protein_coding|CODING|LOC_Os03g29520.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	./.	0/0	1/1	1/1	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	./.	1/1	./.	./.	1/1	./.	./.	./.	./.	./.	0/0	1/1	./.	1/1	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	./.	0/0	1/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	16830403	SNP-3.16829276.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	./.	1/1	./.	0/0	./.	1/1	./.	./.	./.	1/1	./.	./.	./.	1/1	0/0	./.	1/1	0/0	1/1	./.	1/1	./.	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	0/0	0/0	1/1	./.	0/0	1/1	./.	0/0	./.	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	./.	./.	0/0	./.	./.	0/0	./.	0/0	1/1	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	./.	0/0	1/1	./.	./.	./.	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0
+3	16833880	SNP-3.16832753.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/1	0/0	0/1	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	./.	0/1	0/1	0/0	0/0	./.	0/1	./.	0/1	./.	0/0	./.	0/0	0/1	./.	./.	./.	./.	./.	./.	0/0	1/1	./.	1/1	1/1	1/1	./.	./.	./.	0/1	./.	0/1	./.	0/1	0/1	./.	0/1	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/1	0/1	0/1	./.	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	1/1	0/0	0/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	0/0	./.	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	1/1	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	./.
+3	16834732	SNP-3.16833605.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	./.	1/1	1/1	0/1	1/1	./.	1/1	0/1	./.	1/1	0/1	./.	0/1	./.	./.	1/1	./.	./.	0/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	./.	./.	./.	./.	0/1	0/1	./.	1/1	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/1	0/1	0/0	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/1
+3	16834840	SNP-3.16833713.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	./.	0/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/1	1/1	0/1	0/1	0/1	0/1	./.	1/1	1/1	1/1	1/1	./.	0/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/1	./.	./.	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	./.	./.	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	16838056	SNP-3.16836929.	A	G	.	.	PR;EFF=5_prime_UTR_variant(MODIFIER||76|c.-76T>C|305|LOC_Os03g29540|protein_coding|CODING|LOC_Os03g29540.2|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),intron_variant(MODIFIER|||c.-49-27T>C|305|LOC_Os03g29540|protein_coding|CODING|LOC_Os03g29540.1|1|1),intron_variant(MODIFIER|||c.-49-27T>C|305|LOC_Os03g29540|protein_coding|CODING|LOC_Os03g29540.3|1|1)	GT	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	./.	0/0	1/1	./.	1/1	0/0	1/1	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	1/1	0/0	./.	1/1	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	1/1	./.	0/0	0/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	./.	./.	./.	./.	1/1	1/1	1/1	./.	0/0	1/1	0/0	./.	0/0	1/1	1/1	./.	./.	./.	./.	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	./.	0/0	1/1	./.	0/0	1/1
+3	16840375	SNP-3.16839248.	C	A	.	.	PR;EFF=5_prime_UTR_variant(MODIFIER||2395|c.-2395G>T|305|LOC_Os03g29540|protein_coding|CODING|LOC_Os03g29540.2|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),intron_variant(MODIFIER|||c.-50+202G>T|305|LOC_Os03g29540|protein_coding|CODING|LOC_Os03g29540.3|1|1)	GT	./.	0/0	./.	./.	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/1	./.	./.	0/0	0/0	0/1	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	./.	0/0	./.	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/1	0/1	0/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	./.	1/1	./.	1/1	./.	1/1	0/0	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	./.	1/1	0/0
+3	16841473	SNP-3.16840346.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|tGt/tCt|p.Cys240Ser/c.719T>C|303|LOC_Os03g29550|protein_coding|CODING|LOC_Os03g29550.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	1/1	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	./.	./.	./.	0/0	./.	1/1	0/0	./.	./.	0/0	./.	./.	./.	1/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	./.	./.	1/1	1/1	./.	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	./.	./.	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	./.	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	./.	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0	1/1
+3	16841580	SNP-3.16840453.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.677-65G>T|303|LOC_Os03g29550|protein_coding|CODING|LOC_Os03g29550.1|2|1)	GT	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	1/1	./.	1/1	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/1	0/0	0/0	1/1	0/0
+3	16842371	SNP-3.16841244.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Ggt/Cgt|p.Gly135Arg/c.403T>C|303|LOC_Os03g29550|protein_coding|CODING|LOC_Os03g29550.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/1	0/1	0/1	./.	0/1	0/1	0/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/1	0/1	0/1	0/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	0/1	./.	1/1	0/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	./.	0/1	0/0	./.	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/1
+3	16842419	SNP-3.16841292.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Gta/Tta|p.Val119Leu/c.355G>T|303|LOC_Os03g29550|protein_coding|CODING|LOC_Os03g29550.1|1|1)	GT	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	16842546	SNP-3.16841419.	A	G	.	.	PR;EFF=synonymous_variant(LOW||gaC/gaC|p.Asp76Asp/c.228T>C|303|LOC_Os03g29550|protein_coding|CODING|LOC_Os03g29550.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	0/0	0/1	0/0	./.	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/1	./.	1/1	0/1	./.	1/1	1/1	./.	0/1	1/1	0/1	0/1	0/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	0/1	1/1	0/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/1	0/0	0/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/1	0/0	./.	1/1	./.	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/1	0/0	0/1	0/1	0/0	1/1
+3	16842798	SNP-3.16841671.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	1/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1
+3	16843300	SNP-3.16842173.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	./.	0/0	./.	0/0	0/0	0/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	./.	./.	./.	0/0	0/0	0/1	0/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/1	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	./.	0/1	0/0	./.	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	./.	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0
+3	16855971	SNP-3.16854844.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/1	0/0	./.	1/1	0/1	./.	0/0	./.	./.	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	./.	1/1	./.	1/1	./.	0/1	./.	1/1	1/1	1/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	1/1	1/1	0/1	0/0	1/1	0/0	1/1	0/0	0/1	1/1	0/0	0/0	0/1	./.	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/1	1/1	1/1	0/0	1/1
+3	16856289	SNP-3.16855162.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	16856475	SNP-3.16855348.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	0/0	0/1	./.	./.	0/0	1/1	./.	./.	0/1	0/0	0/0	./.	1/1	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	./.	0/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	16861320	SNP-3.16860193.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.184+254G>T|217|LOC_Os03g29570|protein_coding|CODING|LOC_Os03g29570.1|3|1)	GT	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	0/1	1/1	./.	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	./.	0/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	16861617	SNP-3.16860490.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|cgT/cgC|p.Arg47Arg/c.141T>C|217|LOC_Os03g29570|protein_coding|CODING|LOC_Os03g29570.1|3|1)	GT	0/0	./.	1/1	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	./.	1/1	./.	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	./.	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	1/1	./.	./.	./.	./.	1/1	./.	0/0	0/0	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0
+3	16861796	SNP-3.16860669.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.76-114G>T|217|LOC_Os03g29570|protein_coding|CODING|LOC_Os03g29570.1|2|1)	GT	./.	0/0	./.	./.	1/1	./.	0/1	./.	1/1	./.	0/0	0/0	./.	./.	0/1	1/1	0/0	0/1	0/0	./.	0/0	./.	./.	0/1	./.	0/0	./.	0/0	./.	0/1	0/1	0/0	0/0	./.	0/1	./.	0/0	0/0	./.	./.	0/1	0/0	0/0	0/1	./.	0/0	./.	0/0	0/0	1/1	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/1	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	./.	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	0/0	./.	./.	./.	0/0	./.	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/1	./.	1/1	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	./.	0/0
+3	16864273	SNP-3.16863146.	A	G	.	.	PR;EFF=synonymous_variant(LOW||ctG/ctG|p.Leu113Leu/c.339A>G|401|LOC_Os03g29584|protein_coding|CODING|LOC_Os03g29584.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	./.	1/1	0/0	0/0	./.	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	./.	1/1	./.	0/1	1/1	0/0	1/1	0/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	./.	0/0	0/0	0/0	0/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	16865191	SNP-3.16864064.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.717+111A>G|401|LOC_Os03g29584|protein_coding|CODING|LOC_Os03g29584.1|2|1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	16865836	SNP-3.16864709.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.718-58C>A|401|LOC_Os03g29584|protein_coding|CODING|LOC_Os03g29584.1|2|1)	GT	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	16866568	SNP-3.16865441.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.846+546A>G|401|LOC_Os03g29584|protein_coding|CODING|LOC_Os03g29584.1|3|1)	GT	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	./.	0/0	./.	1/1	./.	1/1	0/0	./.	./.	0/0	0/0	./.	./.	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	1/1	0/0	./.	./.	0/0	0/0	./.	0/0	1/1	1/1	./.	0/0	0/0	0/0	./.	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	./.	./.	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	1/1	./.	./.	./.	1/1	./.	./.	0/0	./.	0/0	./.	0/0	1/1	1/1	0/0	./.	0/0	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	./.	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	0/0	./.	./.	./.	./.	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	1/1	1/1	./.	./.	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1
+3	16867052	SNP-3.16865925.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.847-413A>G|401|LOC_Os03g29584|protein_coding|CODING|LOC_Os03g29584.1|3|1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	./.	./.	0/0	./.	./.	1/1	0/0	./.	./.	./.	0/0	0/1	./.	./.	0/1	0/1	0/1	./.	./.	0/1	./.	./.	./.	0/0	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	0/0	./.	0/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/1	./.	1/1	0/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/1	0/0	./.	./.	0/0	./.	./.	0/0	0/1	1/1	0/0	0/1	0/0	./.	0/0	./.	1/1	./.	0/1	./.	./.	0/0	./.	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	1/1	./.	0/0	0/0	./.	0/1	./.	./.	./.	0/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1
+3	16867616	SNP-3.16866489.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.915+83A>G|401|LOC_Os03g29584|protein_coding|CODING|LOC_Os03g29584.1|4|1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	./.	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0
+3	16867809	SNP-3.16866682.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.915+276A>G|401|LOC_Os03g29584|protein_coding|CODING|LOC_Os03g29584.1|4|1)	GT	1/1	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	./.	./.	1/1	1/1	./.	1/1	./.	1/1	./.	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	./.	1/1	0/0	1/1	./.	./.	./.	./.	0/0	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	./.	0/0	./.	./.	0/0	1/1	1/1	./.	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	1/1	./.	./.	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	./.	./.	1/1	1/1	0/0	./.	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0
+3	16868418	SNP-3.16867291.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.1116+49A>G|401|LOC_Os03g29584|protein_coding|CODING|LOC_Os03g29584.1|5|1)	GT	1/1	./.	1/1	./.	0/0	0/0	./.	./.	0/0	1/1	./.	1/1	./.	0/0	0/0	1/1	1/1	1/1	0/0	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0
+3	16868554	SNP-3.16867427.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.1116+185C>A|401|LOC_Os03g29584|protein_coding|CODING|LOC_Os03g29584.1|5|1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/1	0/0	1/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	./.
+3	16869013	SNP-3.16867886.	A	G	.	.	PR;EFF=synonymous_variant(LOW||Gtt/Gtt|p.Val391Val/c.1171A>G|401|LOC_Os03g29584|protein_coding|CODING|LOC_Os03g29584.1|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	16869049	SNP-3.16867922.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/1	0/0	1/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	16869162	SNP-3.16868035.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	./.	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	./.	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0
+3	16869256	SNP-3.16868129.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	1/1	./.	1/1	./.	./.	./.	1/1	./.	./.	1/1	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	./.	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	./.	1/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	./.	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	./.	0/0
+3	16869645	SNP-3.16868518.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	1/1	0/1	0/1	0/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	1/1	0/1	0/0	0/1	0/1	0/1	0/0	0/0	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/1	1/1	0/1	0/1	1/1	0/0
+3	16873120	SNP-3.16871993.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	./.	./.	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	16873753	SNP-3.16872626.	A	G	.	.	PR;EFF=synonymous_variant(LOW||gGg/gGg|p.Gly5Gly/c.14A>G|798|LOC_Os03g29600|protein_coding|CODING|LOC_Os03g29600.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	0/0	1/1	0/0	./.	./.	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	16874793	SNP-3.16873666.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.844-26C>A|798|LOC_Os03g29600|protein_coding|CODING|LOC_Os03g29600.1|3|1)	GT	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/0	1/1	0/0
+3	16874827	SNP-3.16873700.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ccT/ccA|p.Pro284Pro/c.852C>A|798|LOC_Os03g29600|protein_coding|CODING|LOC_Os03g29600.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	16875286	SNP-3.16874159.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ctC/ctG|p.Leu405Leu/c.1215A>G|798|LOC_Os03g29600|protein_coding|CODING|LOC_Os03g29600.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/1	0/0	1/1	0/0	1/1	1/1	0/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	16876042	SNP-3.16874915.	A	G	.	.	PR;EFF=synonymous_variant(LOW||ccG/ccG|p.Pro526Pro/c.1578A>G|798|LOC_Os03g29600|protein_coding|CODING|LOC_Os03g29600.1|7|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	1/1	0/0	0/0	1/1	./.	./.	0/0	1/1	1/1	1/1	./.	./.	./.	0/0	1/1	./.	1/1	0/0	./.	0/1	0/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/1	./.	1/1	1/1	0/1	0/1	./.	1/1	./.	0/0	./.	0/1	./.	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	./.	1/1	1/1	0/1	0/1	1/1	0/1	./.	0/0	./.	0/0	1/1	1/1	1/1	./.	0/1	1/1	1/1	0/1	0/0	1/1	0/1	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/1	0/0	1/1	1/1	0/0	1/1
+3	16876766	SNP-3.16875639.	C	A	.	.	PR;EFF=synonymous_variant(LOW||Aca/Aca|p.Thr729Thr/c.2185C>A|798|LOC_Os03g29600|protein_coding|CODING|LOC_Os03g29600.1|9|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	./.	./.	0/0	1/1	0/0	./.	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/1	0/1	./.	1/1	1/1	./.	0/0	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	16877583	SNP-3.16876456.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	16878653	SNP-3.16877526.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	./.	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	16879736	SNP-3.16878609.	C	A	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||54|c.*54G>T|321|LOC_Os03g29614|protein_coding|CODING|LOC_Os03g29614.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/1	./.	0/0	0/0	0/1	0/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	16881068	SNP-3.16879941.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.264-576G>T|321|LOC_Os03g29614|protein_coding|CODING|LOC_Os03g29614.1|2|1)	GT	0/0	0/0	0/0	1/1	./.	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	1/1	0/0	1/1	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	1/1	0/0	1/1	./.	1/1	0/0	./.	0/0	./.	0/0	./.	0/0	1/1	./.	./.	0/0	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	./.	./.	0/0	./.	0/0	./.	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0
+3	16882354	SNP-3.16881227.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.263+861T>C|321|LOC_Os03g29614|protein_coding|CODING|LOC_Os03g29614.1|2|1)	GT	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/1	0/1	./.	0/1	0/0	0/1	1/1	0/1	0/0	0/1	0/0	0/1	0/0	0/1	0/1	1/1	0/1	1/1	0/0	0/1	0/1	1/1	0/1	0/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	0/1	0/1	0/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	0/0	0/0	1/1	0/1	0/1	0/1	1/1	0/1	0/1	1/1	0/1	1/1	0/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/1	./.	0/1	0/1	./.	0/1	0/0	0/1	1/1	0/0	1/1	0/1	0/1	0/0	0/1	0/0	0/1	0/0	0/0	./.	0/0	0/1	./.	0/1	./.	./.	1/1	1/1	0/1	0/0	0/1	0/0	1/1	0/1	0/1	0/1	1/1	1/1	0/1	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/1	0/0	0/0	0/1	0/1	./.	1/1	1/1	0/1	0/1	0/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/1
+3	16884674	SNP-3.16883547.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	./.	0/0
+3	16885632	SNP-3.16884505.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	16887221	SNP-3.16886094.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	./.	./.	1/1	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	./.	./.	./.	./.	./.	1/1	./.	./.	0/0	./.	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	./.	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	16887442	SNP-3.16886315.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/1	./.	./.	0/1	0/0	0/0	0/1	0/1	0/0	0/1	./.	0/0	1/1	0/1	0/0	0/1	0/1	0/1	0/0	0/1	./.	0/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/1	0/1	1/1	0/0	0/1	./.	./.	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/1	0/0	0/1	0/1	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/1	1/1	./.	0/0	0/1	0/1	0/0	0/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/1	0/1	0/0	0/0	./.	0/1	0/0	0/0	./.	0/0	0/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1
+3	16887944	SNP-3.16886817.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	16894190	SNP-3.16893063.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	./.	./.	1/1	0/0	1/1	./.	1/1	./.	./.	1/1	./.	0/0	./.	1/1	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	0/0	1/1	0/0	./.	./.	./.	./.	./.	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	1/1	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1
+3	16894727	SNP-3.16893600.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0
+3	16901615	SNP-3.16900488.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	./.	1/1	./.	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	./.	./.	1/1	1/1	./.	./.	0/0	./.	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	./.	1/1	./.	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	./.	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	0/0	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0
+3	16906662	SNP-3.16905535.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.2082+215A>G|1659|LOC_Os03g29650|protein_coding|CODING|LOC_Os03g29650.1|4|1)	GT	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	./.	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	0/1	0/0	0/1	1/1	1/1	0/0	./.	1/1	./.	./.	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/1	./.	1/1	1/1	./.	0/0	0/0	0/0	1/1	./.	1/1	0/1	1/1	./.	1/1	./.	0/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	0/1	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	1/1	./.	1/1	0/0	0/0	0/1	0/1	1/1	./.	1/1	./.	./.	0/0	0/1	0/0	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	./.	0/0	./.	1/1	0/0	./.	./.	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1
+3	16907231	SNP-3.16906104.	C	A	.	.	PR;EFF=synonymous_variant(LOW||gcA/gcA|p.Ala742Ala/c.2226C>A|1659|LOC_Os03g29650|protein_coding|CODING|LOC_Os03g29650.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	./.	0/0	1/1	0/1	./.	1/1	./.	./.	1/1	1/1	./.	0/1	1/1	./.	./.	./.	1/1	1/1	./.	1/1	0/0	./.	./.	./.	./.	1/1	0/0	1/1	0/1	1/1	1/1	0/1	1/1	./.	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	./.	1/1	./.	./.	0/0	./.	1/1	1/1	0/0	./.	0/0	0/1	./.	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	16907925	SNP-3.16906798.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.2791-60A>G|1659|LOC_Os03g29650|protein_coding|CODING|LOC_Os03g29650.1|5|1)	GT	0/0	1/1	1/1	./.	0/0	1/1	0/0	./.	0/0	./.	./.	1/1	0/0	1/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	./.	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	1/1	./.	./.	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	./.	1/1	0/0	./.	0/0	1/1
+3	16908677	SNP-3.16907550.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|cgC/cgA|p.Arg1161Arg/c.3483C>A|1659|LOC_Os03g29650|protein_coding|CODING|LOC_Os03g29650.1|6|1)	GT	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	0/1	0/0	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	0/0	./.	0/0	./.	./.	1/1	0/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	16908694	SNP-3.16907567.	A	G	.	.	PR;EFF=synonymous_variant(LOW||gGa/gGa|p.Gly1167Gly/c.3500A>G|1659|LOC_Os03g29650|protein_coding|CODING|LOC_Os03g29650.1|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	./.	./.	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	./.	1/1	1/1	1/1	./.	./.	./.	0/1	0/0	1/1	./.	./.	0/0	1/1	0/0	1/1	1/1	0/0	1/1	./.	./.	./.	0/1	0/1	./.	1/1	./.	1/1	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	0/0	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	./.	./.
+3	16911094	SNP-3.16909967.	C	A	.	.	PR;EFF=synonymous_variant(LOW||ctT/ctT|p.Leu661Leu/c.1983G>T|823|LOC_Os03g29660|protein_coding|CODING|LOC_Os03g29660.1|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/1	0/1	0/0	1/1	./.	1/1	0/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/1	0/1	0/0	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/1	0/0	1/1	0/0	0/0	0/0	0/0
+3	16912862	SNP-3.16911735.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|gcA/gcC|p.Ala198Ala/c.594T>C|823|LOC_Os03g29660|protein_coding|CODING|LOC_Os03g29660.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	1/1	0/0	./.	./.	./.	./.	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	./.	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	1/1	./.	1/1	./.	1/1	0/0	./.	0/0	0/0	1/1	0/0	./.	1/1	./.	1/1	./.	0/0	./.	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	./.	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	./.	./.	0/0	0/0	1/1	1/1	./.	0/0	./.	./.	1/1	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0
+3	16913768	SNP-3.16912641.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	./.	0/0	1/1	0/0	1/1	0/0	./.	1/1	./.	0/0	./.	0/0	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.
+3	16913889	SNP-3.16912762.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	./.	./.	1/1	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	./.	0/0	1/1	./.	./.	0/0	./.	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	0/0	./.	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	1/1	1/1	1/1	./.	0/0	./.	0/0	1/1	1/1	0/0	1/1	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	1/1	./.	0/0	1/1	1/1	./.	0/0	./.	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1
+3	16916409	SNP-3.16915282.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/1	./.	0/1	0/0	0/0	0/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	16918539	SNP-3.16917412.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	0/1	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/1	0/0	1/1	0/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	./.	0/0	1/1	0/1	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/1	1/1
+3	16922757	SNP-3.16921630.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/1	./.	./.	0/1	1/1	0/0	0/1	./.	1/1	0/0	./.	0/1	./.	0/0	0/1	0/1	0/1	./.	1/1	1/1	0/1	./.	1/1	0/1	0/0	0/0	0/1	./.	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	0/0	./.	1/1	0/1	1/1	./.	./.	1/1	1/1	1/1	1/1	0/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/1	1/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	./.	0/0	1/1	./.	0/0	1/1	0/0	./.	1/1	0/1	0/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/1	./.	0/0	./.	0/1	1/1	0/1	0/0	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	./.	1/1	0/0	1/1	1/1	1/1	./.	0/1	./.	1/1	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	./.	./.	./.	0/0	0/1
+3	16922834	SNP-3.16921707.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	16925079	SNP-3.16923952.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.336+42T>C|195|LOC_Os03g29690|protein_coding|CODING|LOC_Os03g29690.1|1|1)	GT	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	16926996	SNP-3.16925869.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	./.	1/1	0/0	1/1	1/1	./.	0/1	0/1	./.	1/1	./.	./.	1/1	./.	1/1	1/1	./.	0/0	0/1	0/1	0/1	0/0	./.	./.	0/1	0/0	./.	0/0	0/1	0/1	1/1	0/0	1/1	./.	./.	1/1	1/1	0/0	1/1	1/1	./.	./.	1/1	0/1	1/1	0/1	1/1	./.	./.	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	./.	./.	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	16928902	SNP-3.16927775.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	16931092	SNP-3.16929965.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	./.	1/1	1/1	0/0	./.	1/1	./.	./.	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	./.	./.	0/0	0/0	./.	1/1	./.	0/0	0/1	0/1	0/1	0/0	./.	./.	0/1	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	1/1	./.	./.	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	./.	0/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	0/0	./.	0/1	0/0	./.	./.	0/0	0/0	./.	0/0	1/1	./.	1/1	0/0	./.	1/1	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/1	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	1/1	0/0
+3	16931262	SNP-3.16930135.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	16936518	SNP-3.16935391.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	./.	0/0	./.	1/1	1/1	./.	0/1	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	0/0	./.	1/1	1/1	1/1	./.	0/0	0/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	1/1	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	16936542	SNP-3.16935415.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	16936990	SNP-3.16935863.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	16941790	SNP-3.16940663.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.58+415A>G|80|LOC_Os03g29740|protein_coding|CODING|LOC_Os03g29740.1|2|1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	1/1	0/0	1/1	0/0	0/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	16944235	SNP-3.16943108.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	1/1	./.	./.	./.	0/0	0/0	./.	./.	1/1	1/1	1/1	./.	0/0	1/1	./.	1/1	./.	1/1	./.	1/1	0/0	./.	1/1	./.	1/1	1/1	./.	./.	./.	1/1	./.	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	1/1	./.	./.	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	./.	0/0	./.	./.	./.	1/1	./.	./.	./.	1/1	./.	./.	./.	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.
+3	16945031	SNP-3.16943904.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	16946305	SNP-3.16945178.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	16946616	SNP-3.16945489.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	./.	0/0	./.	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	16948390	SNP-3.16947263.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	16957271	SNP-3.16956144.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/1	1/1	0/0	0/1	0/1	0/0	0/0	1/1	1/1	0/1	0/1	0/1	0/1	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/1	1/1	./.	./.	1/1	1/1	./.	./.	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	0/1	1/1	0/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	16958073	SNP-3.16956946.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1
+3	16958180	SNP-3.16957053.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1
+3	16959242	SNP-3.16958115.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	16964467	SNP-3.16963340.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	0/0	1/1	./.	./.	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	0/0	1/1	1/1	0/0	0/0
+3	16965256	SNP-3.16964129.	C	A	.	.	PR;EFF=5_prime_UTR_variant(MODIFIER||1674|c.-194C>A|317|LOC_Os03g29760|protein_coding|CODING|LOC_Os03g29760.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),5_prime_UTR_variant(MODIFIER||1674|c.-189C>A|312|LOC_Os03g29760|protein_coding|CODING|LOC_Os03g29760.3|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/1	0/1	./.	0/1	1/1	1/1	1/1	./.	1/1	0/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/1	0/1	./.	0/1	./.	./.	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	1/1	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/1	./.	1/1	0/0
+3	16966085	SNP-3.16964958.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.-42+677C>A|317|LOC_Os03g29760|protein_coding|CODING|LOC_Os03g29760.1|1|1),intron_variant(MODIFIER|||c.-37+677C>A|312|LOC_Os03g29760|protein_coding|CODING|LOC_Os03g29760.3|1|1)	GT	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	./.	./.	0/0	./.	0/0	0/0	./.	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.
+3	16966140	SNP-3.16965013.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.-42+732A>G|317|LOC_Os03g29760|protein_coding|CODING|LOC_Os03g29760.1|1|1),intron_variant(MODIFIER|||c.-37+732A>G|312|LOC_Os03g29760|protein_coding|CODING|LOC_Os03g29760.3|1|1)	GT	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	./.	./.	0/0	./.	0/0	./.	./.	./.	./.	1/1	0/0	./.	./.	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	1/1	1/1	./.	./.	1/1	./.	1/1	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	./.	./.	./.	1/1	0/0	./.	0/0	./.	./.	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	1/1	1/1	./.	1/1	./.	./.	./.	./.	./.	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	./.	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0
+3	16966275	SNP-3.16965148.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.-41-614A>G|317|LOC_Os03g29760|protein_coding|CODING|LOC_Os03g29760.1|1|1),intron_variant(MODIFIER|||c.-36-619A>G|312|LOC_Os03g29760|protein_coding|CODING|LOC_Os03g29760.3|1|1)	GT	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	./.	0/0	./.	0/0	./.	./.	1/1	0/0	./.	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1	./.	1/1	0/0	./.	1/1	./.	0/0	1/1	./.	./.	./.	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	./.	1/1	0/0	./.	1/1	1/1	./.	1/1	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	./.	1/1	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	1/1	0/0	0/0	./.	./.	1/1	0/0	1/1	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	./.	0/0	0/0	./.	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.
+3	16967089	SNP-3.16965962.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ctT/ctA|p.Leu24Leu/c.72C>A|317|LOC_Os03g29760|protein_coding|CODING|LOC_Os03g29760.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW|SILENT|ctT/ctA|p.Leu24Leu/c.72C>A|317|LOC_Os03g29760|protein_coding|CODING|LOC_Os03g29760.2|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW|SILENT|ctT/ctA|p.Leu24Leu/c.72C>A|312|LOC_Os03g29760|protein_coding|CODING|LOC_Os03g29760.3|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	16967136	SNP-3.16966009.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gAt/gGt|p.Asp40Gly/c.119A>G|317|LOC_Os03g29760|protein_coding|CODING|LOC_Os03g29760.1|3|1),missense_variant(MODERATE|MISSENSE|gAt/gGt|p.Asp40Gly/c.119A>G|317|LOC_Os03g29760|protein_coding|CODING|LOC_Os03g29760.2|2|1),missense_variant(MODERATE|MISSENSE|gAt/gGt|p.Asp40Gly/c.119A>G|312|LOC_Os03g29760|protein_coding|CODING|LOC_Os03g29760.3|3|1)	GT	./.	0/0	./.	1/1	0/0	./.	./.	0/0	0/0	./.	./.	1/1	0/0	./.	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	./.	0/0	./.	./.	./.	./.	./.	0/0	1/1	0/0	0/0	./.	0/0	./.	1/1	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	./.	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/1	./.	./.	./.	0/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	1/1	./.	./.	./.	0/0	./.	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/1	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	./.	./.	0/0	1/1	./.	1/1	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	./.	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	1/1
+3	16968739	SNP-3.16967612.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.218-129C>A|317|LOC_Os03g29760|protein_coding|CODING|LOC_Os03g29760.1|3|1),intron_variant(MODIFIER|||c.218-129C>A|317|LOC_Os03g29760|protein_coding|CODING|LOC_Os03g29760.2|2|1),intron_variant(MODIFIER|||c.218-144C>A|312|LOC_Os03g29760|protein_coding|CODING|LOC_Os03g29760.3|3|1)	GT	1/1	./.	./.	0/0	1/1	0/0	./.	./.	1/1	./.	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	0/1	0/1	./.	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	./.	0/0	./.	0/1	./.	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	./.	./.	0/0	./.	./.	0/0	./.	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0
+3	16972073	SNP-3.16970946.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	1/1	1/1	./.	0/0	0/0	./.	1/1	0/0	./.	1/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	0/1	./.	1/1	./.	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	./.	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	1/1	0/0	./.	1/1	0/1	./.	./.	1/1	./.	./.	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	./.	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/0	./.	1/1
+3	16972738	SNP-3.16971611.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/1	0/1	0/0	0/0	0/1	0/0	0/1	0/0	0/1	0/1	0/1	0/1	0/0	0/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	0/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	1/1	0/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	./.	0/0	0/0	0/1	1/1	0/0
+3	16975586	SNP-3.16974459.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|tcG/tcC|p.Ser9Ser/c.27T>C|158|LOC_Os03g29770|protein_coding|CODING|LOC_Os03g29770.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/1	0/1	./.	1/1	./.	0/0	0/1	1/1	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/1	0/1	1/1	1/1	0/1	0/0	0/1	0/0	0/1	0/1	0/0	1/1	1/1	./.	./.	1/1	0/0	./.	./.	1/1	./.	0/1	0/0	./.	0/0	./.	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/1	1/1	./.	1/1	1/1	1/1	0/1	0/1	0/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	0/1	1/1	0/1	0/1	./.	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	0/1	0/0	0/0	0/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/1	0/1	./.	./.	0/0	1/1
+3	16976297	SNP-3.16975170.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	./.	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	./.	0/0	1/1	./.	1/1	1/1	0/0	0/0	./.	./.	./.	./.	1/1	1/1	0/0	1/1	./.	1/1	1/1	./.	0/0	./.	./.	./.	0/0	./.	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	./.	./.	./.	./.	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	./.	0/0	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	0/0	./.	0/0	1/1	1/1	./.	1/1	./.	0/0	1/1	1/1	1/1	./.	./.	1/1	./.	0/0	./.	0/0	0/0	1/1	1/1	./.	./.	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	./.	0/0	1/1	1/1	./.	./.	./.	./.	./.	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	./.	1/1	./.	1/1	0/0	1/1
+3	16976839	SNP-3.16975712.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/1	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1
+3	16978308	SNP-3.16977181.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	./.	0/0	./.	1/1	./.	0/0	1/1	0/1	./.	./.	1/1	1/1	0/1	0/1	./.	./.	1/1	./.	./.	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	./.	1/1	0/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	./.	./.	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/1	0/0	0/1	0/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	./.	1/1	./.	1/1	0/0	0/0	./.	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/1	0/0	0/0	./.	./.	1/1	1/1	./.	1/1	./.	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1
+3	16978380	SNP-3.16977253.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	./.	0/0	./.	0/0	./.	0/0	./.	./.	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	./.	0/0	./.	1/1	./.	0/0	./.	./.	0/0	./.	./.	1/1	./.	0/0	./.	./.	0/0	./.	./.	0/0	./.	0/0	./.	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	./.	./.	./.	./.	1/1	./.	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	./.	./.	1/1	1/1	0/0	./.	./.	1/1	./.	1/1	1/1	./.	0/0	1/1	0/0	1/1	./.	./.	./.	0/0	./.	1/1	./.	./.	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	./.	./.	1/1	./.	./.	./.	1/1	0/0	1/1	./.	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	./.	./.	0/0	1/1	0/0	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	./.	0/0	./.	0/0	1/1
+3	16991576	SNP-3.16990449.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	0/1	1/1	1/1	./.	./.	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	16993049	SNP-3.16991922.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/1	1/1	0/1	0/0	1/1	0/1	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	0/0	1/1	0/0	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	./.	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	16993369	SNP-3.16992242.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	1/1	0/0
+3	16994927	SNP-3.16993800.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.104-312A>G|259|LOC_Os03g29810|protein_coding|CODING|LOC_Os03g29810.1|2|1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1
+3	16998202	SNP-3.16997075.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	./.	0/0	0/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1
+3	17000857	SNP-3.16999730.	A	G	.	.	PR;EFF=synonymous_variant(LOW||Gaa/Gaa|p.Glu97Glu/c.289A>G|178|LOC_Os03g29830|protein_coding|CODING|LOC_Os03g29830.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17003965	SNP-3.17002838.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/0	0/0	1/1	./.	./.	0/0	./.	1/1	./.	0/0	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	./.	1/1	./.	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	./.	1/1	0/0	./.	0/0	0/0	1/1	1/1	./.	0/0	1/1	./.	1/1	0/0	1/1	./.	./.	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	./.	./.	1/1	1/1	0/0	1/1	1/1	0/0	./.	./.	./.	1/1	./.	0/0	1/1	./.	1/1	./.	./.	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0
+3	17006312	SNP-3.17005185.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17006838	SNP-3.17005711.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/1	0/1	1/1	0/0	1/1	./.	0/0	0/0	0/1	1/1	1/1	./.	0/1	./.	0/0	./.	1/1	1/1	0/0	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	0/0	./.	1/1	./.	1/1	0/1	./.	0/1	0/0	0/0	./.	0/1	1/1	./.	0/0	./.	0/0	./.	0/1	0/0	./.	./.	1/1	./.	./.	1/1	0/1	1/1	1/1	./.	0/1	./.	0/0	./.	./.	./.	./.	0/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/1	1/1	1/1	./.	1/1	1/1	0/1	./.	./.	./.	1/1	0/1	./.	./.	0/0	0/1	0/0	1/1	0/0	0/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	1/1	1/1	./.	0/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	./.	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	./.	1/1	1/1	0/0	./.
+3	17006865	SNP-3.17005738.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	1/1	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0
+3	17006874	SNP-3.17005747.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0
+3	17011979	SNP-3.17010852.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	./.	1/1	0/0	./.	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	0/0	1/1	1/1	1/1	./.	1/1	./.	0/0	1/1	./.	1/1	./.	./.	./.	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	./.	./.	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	./.	1/1	1/1	0/0
+3	17012377	SNP-3.17011250.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	./.	./.	0/0	1/1	./.	./.	./.	./.	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	1/1	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	1/1	0/1	./.	./.	1/1	./.	1/1	./.	1/1	1/1	0/0	1/1	1/1	./.	0/0	./.	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/1	./.	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	./.	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	17013438	SNP-3.17012311.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17013512	SNP-3.17012385.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0
+3	17013703	SNP-3.17012576.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	./.	./.	0/0	1/1	./.	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	./.	0/0	./.	0/0	0/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/1	0/0	0/1	./.	./.	1/1	./.	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/1	0/0
+3	17015006	SNP-3.17013879.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Gat/Cat|p.Asp1295His/c.3883T>C|1481|LOC_Os03g29864|protein_coding|CODING|LOC_Os03g29864.1|8|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/1	./.	./.	0/0	./.	./.	0/0	./.	./.	./.	./.	./.	./.	0/0	./.	0/0	0/0	./.	0/0	./.	./.	./.	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	./.	1/1	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	./.	1/1	0/0	./.	0/0	./.	1/1	0/0	0/0	./.	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	./.	./.	./.	./.	1/1	./.	./.	1/1	./.	./.	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1
+3	17019074	SNP-3.17017947.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.1337-97T>C|1481|LOC_Os03g29864|protein_coding|CODING|LOC_Os03g29864.1|4|1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	./.	0/0	1/1	1/1	./.	0/0	0/0	1/1	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	0/0	./.	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	./.	1/1	./.	1/1	./.	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	./.	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	./.	./.	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	./.	./.	1/1	0/0	./.	1/1	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1
+3	17019476	SNP-3.17018349.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.1336+211T>C|1481|LOC_Os03g29864|protein_coding|CODING|LOC_Os03g29864.1|4|1)	GT	0/0	0/0	./.	1/1	0/0	0/0	0/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1
+3	17020461	SNP-3.17019334.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.1231+37G>T|1481|LOC_Os03g29864|protein_coding|CODING|LOC_Os03g29864.1|2|1)	GT	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17022129	SNP-3.17021002.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gaA/gaT|p.Glu148Asp/c.444G>T|1481|LOC_Os03g29864|protein_coding|CODING|LOC_Os03g29864.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	./.	0/0	1/1	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/1	0/1	./.	0/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	./.	1/1	1/1	0/0	0/1	0/0	1/1	0/0	./.	0/1	0/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0
+3	17023931	SNP-3.17022804.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/1	0/1	1/1	0/1	./.	./.	1/1	1/1	0/1	1/1	./.	0/1	./.	1/1	./.	0/1	1/1	0/1	1/1	1/1	1/1	1/1	./.	0/1	0/1	./.	./.	0/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/1	0/0	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	0/1	./.	0/0	0/0	./.	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	./.	0/0	0/1	1/1	./.	./.	0/1	1/1	./.	./.	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	./.	1/1	0/1	0/0	0/1
+3	17027034	SNP-3.17025907.	A	G	.	.	PR;EFF=synonymous_variant(LOW||cCg/cCg|p.Pro477Pro/c.1430T>C|962|LOC_Os03g29880|protein_coding|CODING|LOC_Os03g29880.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	./.	0/1	0/0	0/0	0/1	0/0	0/1	./.	0/0	./.	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	./.	0/1	./.	0/1	./.	0/0	1/1	./.	0/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	./.	0/0	1/1	0/0	1/1	./.	./.	1/1	1/1	1/1	./.	0/1	0/1	0/1	0/0	1/1	./.	./.	./.	0/0	1/1	0/0	./.	./.	1/1	1/1	./.	./.	./.	1/1	./.	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	0/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.
+3	17032121	SNP-3.17030994.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Ggt/Cgt|p.Gly597Arg/c.1789T>C|664|LOC_Os03g29900|protein_coding|CODING|LOC_Os03g29900.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	./.	1/1	0/0	1/1	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	./.	1/1	./.	1/1	1/1	./.	./.	1/1	./.	./.	1/1	./.	./.	./.	./.	./.	1/1	./.	1/1	0/0	./.	./.	./.	0/0	0/0	0/0	./.	1/1	./.	./.	0/0	./.	./.	./.	1/1	./.	0/0	./.	1/1	./.	./.	1/1	./.	./.	0/0	./.	./.	./.	./.	0/0	1/1	./.	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	./.	./.	./.	0/0	./.	0/0	./.	./.	1/1	./.	0/0	0/0	0/0	1/1	./.	./.	1/1	./.	0/0	0/0	./.	1/1	./.	./.	1/1	1/1	./.	./.	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	./.	./.	./.	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	0/0	./.	./.	0/0	./.
+3	17032918	SNP-3.17031791.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cGt/cTt|p.Arg331Leu/c.992G>T|664|LOC_Os03g29900|protein_coding|CODING|LOC_Os03g29900.1|4|1)	GT	./.	0/0	./.	0/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	./.	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17034429	SNP-3.17033302.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.207+280T>C|664|LOC_Os03g29900|protein_coding|CODING|LOC_Os03g29900.1|2|1)	GT	1/1	0/1	./.	0/0	./.	1/1	0/1	0/1	0/1	0/1	0/1	0/1	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/1	0/0	0/1	./.	./.	0/0	0/0	0/1	0/0	0/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	./.	0/0	1/1	./.	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/1	0/0	1/1	0/1	0/0	./.	./.	1/1	1/1	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	17035092	SNP-3.17033965.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.98+37G>T|664|LOC_Os03g29900|protein_coding|CODING|LOC_Os03g29900.1|1|1)	GT	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/1	0/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	0/1	./.	0/1	0/1	0/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	17035251	SNP-3.17034124.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	0/0	1/1	0/0	0/1	0/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0
+3	17035826	SNP-3.17034699.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/1	./.	0/1	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/1	0/1	1/1	1/1	0/0	./.	./.	1/1	0/0	1/1	./.	1/1	0/0	1/1	1/1	0/1	1/1	1/1	./.	1/1	./.	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	./.	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	1/1	./.	0/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/1	1/1	0/1	1/1	0/1	./.	1/1	1/1	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0
+3	17035928	SNP-3.17034801.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	./.	1/1	0/0	0/0	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17036502	SNP-3.17035375.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/1	./.	0/0	1/1	0/0	0/1	0/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17036731	SNP-3.17035604.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/1	./.	0/1	0/0	1/1	0/1	0/1	0/0	0/1	./.	0/1	0/1	./.	./.	0/0	./.	0/1	./.	0/0	./.	0/1	0/0	./.	./.	0/1	0/1	./.	0/1	0/1	0/1	0/0	0/1	0/1	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/1	1/1	1/1	0/1	0/0	0/0	0/0	0/1	0/1	0/0	./.	0/1	0/1	0/1	0/0	0/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/1	./.	0/0	0/1	0/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0	./.	./.	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	1/1	1/1	0/0	0/0
+3	17037461	SNP-3.17036334.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/1	0/1	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	17039258	SNP-3.17038131.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17041239	SNP-3.17040112.	C	A	.	.	PR;EFF=5_prime_UTR_variant(MODIFIER||1650|c.-1650C>A|119|LOC_Os03g29910|protein_coding|CODING|LOC_Os03g29910.2|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),intron_variant(MODIFIER|||c.64+1601C>A|131|LOC_Os03g29910|protein_coding|CODING|LOC_Os03g29910.1|1|1)	GT	0/0	./.	./.	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17046414	SNP-3.17045287.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	1/1	0/0	0/0	./.	1/1	0/0	./.	./.	1/1	./.	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	./.	0/0	1/1	1/1	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	1/1	./.	0/0	0/0	0/0	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	./.	./.	1/1	./.	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0	./.	0/0	1/1	./.	./.	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	1/1	1/1	./.	1/1	./.	./.	0/0	./.	./.	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	./.	0/0	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	./.	./.
+3	17056800	SNP-3.17055613ct.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	0/0	./.	1/1	1/1	0/0	1/1	./.	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	0/0	./.	1/1	1/1	./.	1/1	./.	0/0	./.	./.	1/1	1/1	./.	1/1	0/0	0/0	./.	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	./.	1/1	1/1	1/1	0/0	./.	0/0	./.	./.	1/1	0/0	0/0	1/1	0/0	1/1	./.	1/1	1/1	0/0	./.	0/0	0/0	./.	0/0	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	1/1	./.	./.	./.	./.	1/1	./.	1/1	1/1	0/0	./.	1/1	0/0	./.	1/1	0/0	1/1	0/0	./.	./.	./.	./.	0/0	./.	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	./.	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	0/0	./.	./.	./.	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0
+3	17057151	SNP-3.17055964.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17057230	SNP-3.17056043.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	./.	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	./.	0/0	1/1	0/0
+3	17059410	SNP-3.17058223.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17061585	SNP-3.17060398.	A	G	.	.	PR;EFF=splice_region_variant(LOW|||c.173A>G|1211|LOC_Os03g29940|protein_coding|CODING|LOC_Os03g29940.1|1|1),intron_variant(MODIFIER|||c.173-3A>G|1211|LOC_Os03g29940|protein_coding|CODING|LOC_Os03g29940.1|1|1)	GT	1/1	0/0	0/0	./.	0/0	0/1	0/0	0/1	0/0	1/1	./.	0/0	0/0	./.	./.	0/0	0/1	./.	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/1	0/1	0/1	1/1	./.	./.	0/1	0/0	0/1	./.	./.	0/1	1/1	1/1	0/1	1/1	1/1	0/1	./.	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	0/0	1/1	./.	0/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/1	1/1	0/0	./.	0/0	0/0	0/0	0/1	0/1	0/1	./.	./.	0/1	1/1	./.	0/1	0/1	0/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/1	0/1	./.	1/1	1/1	0/1	1/1	1/1	0/1	0/1	0/0	./.	1/1	1/1	1/1	./.	1/1	0/1	0/0	0/0	0/1	0/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	./.	./.	./.	1/1	0/1	./.	1/1	./.	0/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	1/1	0/1	0/1	1/1	0/0	1/1
+3	17062268	SNP-3.17061081.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Ttg/Atg|p.Leu264Met/c.790C>A|1211|LOC_Os03g29940|protein_coding|CODING|LOC_Os03g29940.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	./.	1/1	1/1	./.	./.	./.	1/1	1/1	./.	0/0	./.	0/0	./.	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	0/0	1/1	./.	./.	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	1/1	1/1	0/0	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0
+3	17064370	SNP-3.17063183.	C	A	.	.	PR;EFF=synonymous_variant(LOW||Aaa/Aaa|p.Lys733Lys/c.2197C>A|1211|LOC_Os03g29940|protein_coding|CODING|LOC_Os03g29940.1|8|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	0/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17064446	SNP-3.17063259.	C	A	.	.	PR;EFF=synonymous_variant(LOW||cAt/cAt|p.His758His/c.2273C>A|1211|LOC_Os03g29940|protein_coding|CODING|LOC_Os03g29940.1|8|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	0/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17064447	SNP-3.17063260.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|caT/caA|p.His758Gln/c.2274C>A|1211|LOC_Os03g29940|protein_coding|CODING|LOC_Os03g29940.1|8|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	./.	./.	0/0	./.	0/0	1/1	1/1	./.	0/0	./.	1/1	0/0	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	0/0	1/1	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	1/1	0/0	./.	1/1	./.	./.	1/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17064676	SNP-3.17063489.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Ctt/Att|p.Leu835Ile/c.2503C>A|1211|LOC_Os03g29940|protein_coding|CODING|LOC_Os03g29940.1|8|1)	GT	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/1	0/0	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	0/1	1/1	0/1	1/1	./.	0/0	0/0	./.	1/1	0/0	1/1	./.	1/1	0/0	./.	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	1/1	./.	./.	0/0	./.	./.	./.	./.	0/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17064954	SNP-3.17063767.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.2577+204C>A|1211|LOC_Os03g29940|protein_coding|CODING|LOC_Os03g29940.1|8|1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	./.	0/0	0/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17065946	SNP-3.17064759.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aaC/aaA|p.Asn995Lys/c.2985C>A|1211|LOC_Os03g29940|protein_coding|CODING|LOC_Os03g29940.1|11|1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	./.	0/0	./.	1/1	1/1	0/0	./.	./.	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	1/1	./.	./.	0/0	1/1	0/0	./.	./.	./.	1/1	1/1	0/0	./.	./.	./.	0/0	./.	0/0	./.	./.	0/0	1/1	0/0	0/0	./.	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	./.	./.	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	./.	./.	0/0	./.	1/1	./.	1/1	1/1	0/0	./.	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1
+3	17066399	SNP-3.17065212.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.3362-21A>G|1211|LOC_Os03g29940|protein_coding|CODING|LOC_Os03g29940.1|11|1)	GT	1/1	0/0	./.	0/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	./.	0/0	1/1	./.	1/1	0/1	1/1	1/1	./.	0/1	0/1	0/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	./.	./.	0/0	./.	1/1	0/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/1	0/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/1	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	0/1	./.	./.	0/1	1/1	0/0	./.	0/0	1/1	0/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	0/1	1/1	./.	1/1	1/1	1/1	./.	0/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1
+3	17067493	SNP-3.17066306.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	./.	1/1	./.	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17069149	SNP-3.17067962.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.555+155C>A|577|LOC_Os03g29950|protein_coding|CODING|LOC_Os03g29950.1|4|1),intron_variant(MODIFIER|||c.177+155C>A|451|LOC_Os03g29950|protein_coding|CODING|LOC_Os03g29950.2|4|1)	GT	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	0/1	0/1	0/1	0/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	0/1	0/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17073834	SNP-3.17072647.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0
+3	17074874	SNP-3.17073687.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	./.	./.	./.	0/0	./.	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	./.	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0
+3	17076813	SNP-3.17075626.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	1/1	0/1	0/0	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	0/0	0/1	0/0	./.	0/1	0/1	0/1	0/1	1/1	0/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	./.	1/1	1/1	1/1	./.	./.	0/0	0/0	1/1	1/1	0/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	17079019	SNP-3.17077832.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.100-9A>G|677|LOC_Os03g29960|protein_coding|CODING|LOC_Os03g29960.1|2|1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	17080712	SNP-3.17079525.	A	G	.	.	PR;EFF=synonymous_variant(LOW||atG/atG|p.Met208Met/c.624A>G|677|LOC_Os03g29960|protein_coding|CODING|LOC_Os03g29960.1|9|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/1	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	17080998	SNP-3.17079811.	A	G	.	.	PR;EFF=synonymous_variant(LOW||Gtt/Gtt|p.Val304Val/c.910A>G|677|LOC_Os03g29960|protein_coding|CODING|LOC_Os03g29960.1|9|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/1	./.	1/1	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	./.	0/0	./.	0/1	1/1	0/0	./.	./.	0/0	./.	./.	0/0	1/1	0/0	./.	./.	./.	./.	./.	./.	0/1	./.	./.	0/1	1/1	./.	./.	1/1	0/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/1	1/1	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	1/1	./.	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/1	./.	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	./.	./.	0/0	0/0	0/0	0/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0	./.	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	./.	./.	./.	0/0	0/1
+3	17082728	SNP-3.17081541.	A	G	.	.	PR;EFF=stop_gained(HIGH|NONSENSE|taC/taG|p.Tyr342*/c.1026A>G|677|LOC_Os03g29960|protein_coding|CODING|LOC_Os03g29960.1|10|1|WARNING_REF_DOES_NOT_MATCH_GENOME);LOF=(LOC_Os03g29960|LOC_Os03g29960|1|1.00);NMD=(LOC_Os03g29960|LOC_Os03g29960|1|1.00)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	1/1	0/1	1/1	1/1	0/1	1/1	0/0	0/1	1/1	1/1	./.	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17083355	SNP-3.17082168.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gCg/gGg|p.Ala450Gly/c.1349A>G|677|LOC_Os03g29960|protein_coding|CODING|LOC_Os03g29960.1|12|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1
+3	17084496	SNP-3.17083309.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	0/0	1/1	./.	0/0	1/1	1/1	1/1	0/0	./.	1/1	./.	0/0	0/0	./.	./.	./.	0/0	./.	./.	0/0	./.	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	1/1	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	1/1	./.	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	1/1	0/0	1/1	./.	1/1	./.	./.	./.	./.	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	./.	./.	./.	./.	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	1/1	1/1	./.	1/1	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0
+3	17084825	SNP-3.17083638.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17085178	SNP-3.17083991.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0
+3	17086489	SNP-3.17085302.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.637+465C>A|225|LOC_Os03g29970|protein_coding|CODING|LOC_Os03g29970.1|1|1)	GT	0/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/1	0/0	0/0	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/1	./.	0/0	0/1	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/1	./.	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17086506	SNP-3.17085319.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.637+482A>G|225|LOC_Os03g29970|protein_coding|CODING|LOC_Os03g29970.1|1|1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0
+3	17089448	SNP-3.17088261.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	./.	./.	1/1	0/0	./.	./.	1/1	./.	1/1	./.	1/1	1/1	0/0	1/1	0/0	./.	./.	./.	0/0	./.	./.	./.	1/1	0/0	1/1	./.	./.	./.	./.	./.	./.	./.	0/0	./.	./.	./.	1/1	./.	./.	./.	1/1	0/0	./.	1/1	./.	1/1	1/1	./.	./.	1/1	./.	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	./.	./.	0/0	./.	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	1/1	1/1	./.	0/0	0/1
+3	17089753	SNP-3.17088566.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	./.	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	./.	0/0	0/0	1/1	./.	0/0	0/0	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17090397	SNP-3.17089210.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	./.	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/1	./.	./.	0/0	0/0	1/1	1/1	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1
+3	17090472	SNP-3.17089285.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	./.	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/1	./.	0/0	0/0	0/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0	0/0	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	./.	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0
+3	17090776	SNP-3.17089589.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	0/0	1/1	1/1	1/1	./.	0/1	./.	1/1	0/1	0/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	0/1	0/1	0/1	0/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	17092256	SNP-3.17091069.	A	G	.	.	PR;EFF=5_prime_UTR_variant(MODIFIER||1130|c.-310A>G|374|LOC_Os03g29980|protein_coding|CODING|LOC_Os03g29980.2|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/1	0/0	1/1	0/0	0/0	./.	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1
+3	17092943	SNP-3.17091756.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.-221+9A>G|374|LOC_Os03g29980|protein_coding|CODING|LOC_Os03g29980.2|2|1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17097439	SNP-3.17096252.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	./.	1/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	./.	./.	0/0	0/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/1	./.	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	./.	0/0	0/0	./.	./.	0/0
+3	17098846	SNP-3.17097659.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	17099351	SNP-3.17098164.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17099628	SNP-3.17098441.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17100185	SNP-3.17098998.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	0/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	1/1	./.	1/1	0/0	1/1	1/1	./.	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	./.	0/0	./.	./.	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	./.	./.	0/1	0/1	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	./.	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	1/1	0/0	1/1	0/0	./.	0/0	./.
+3	17100860	SNP-3.17099673.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17101619	SNP-3.17100432.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	./.	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17102747	SNP-3.17101560.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	./.	./.	0/0	0/0	0/1	./.	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/1	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	./.	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17103110	SNP-3.17101923.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	./.	./.	./.	0/0	./.	./.	1/1	0/0	0/0	./.	0/1	./.	./.	0/1	0/0	./.	0/1	0/1	0/0	./.	./.	1/1	0/0	0/1	1/1	1/1	1/1	0/1	0/1	0/0	1/1	./.	1/1	0/1	0/1	0/0	1/1	0/1	1/1	0/1	0/0	./.	./.	0/1	1/1	0/1	./.	1/1	0/0	0/1	./.	0/1	0/0	1/1	1/1	./.	1/1	0/1	0/1	0/0	./.	./.	1/1	0/1	1/1	0/0	./.	1/1	0/1	0/1	./.	0/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/1	./.	0/0	1/1	1/1	0/1	0/0	1/1	1/1	0/1	1/1	./.	0/0	1/1	0/0	1/1	./.	1/1	0/1	0/0	./.	0/1	./.	./.	1/1	1/1	1/1	1/1	0/0	1/1	./.	./.	./.	0/0	./.	0/0	./.	./.	./.	1/1	1/1	./.	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	./.	./.	1/1	./.	0/0	1/1
+3	17106949	SNP-3.17105762.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	17107044	SNP-3.17105857.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	17107091	SNP-3.17105904.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	1/1	0/1	./.	./.	1/1	1/1	0/0	0/1	./.	1/1	0/0	0/1	1/1	./.	0/0	0/1	0/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/1	1/1	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	./.	./.	0/1	1/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17107615	SNP-3.17106428.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/1	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/1	./.	0/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/1	1/1	./.	0/0	1/1	0/0	0/1	0/0	0/0	1/1	0/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	17113483	SNP-3.17112296.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.-2-23T>C|541|LOC_Os03g30000|protein_coding|CODING|LOC_Os03g30000.1|1|1)	GT	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	./.	./.	./.	./.	0/0	./.	0/0	1/1	./.	./.	1/1	./.	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	./.	./.	0/0	./.	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	./.	./.	1/1	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.
+3	17114176	SNP-3.17112989.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17114400	SNP-3.17113213.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17116915	SNP-3.17115728.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	./.	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/1	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	./.	0/0	0/0	0/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/1	./.	./.	./.	0/0	0/0	./.	0/1	0/1	./.	1/1	./.	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	1/1	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0
+3	17117693	SNP-3.17116506.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	./.	./.	0/0	./.	0/0	./.	./.	0/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/1	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	1/1	./.	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/1	./.	./.	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/1	0/0	0/0	./.	./.	./.	0/0	0/0	./.	0/0	./.	./.	0/1	0/0	./.	./.	./.	0/0	0/0	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	./.	./.	./.	0/0	1/1	0/1
+3	17118886	SNP-3.17117699.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17120131	SNP-3.17118944.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.87+389T>C|113|LOC_Os03g30010|protein_coding|CODING|LOC_Os03g30010.1|2|1)	GT	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	17120266	SNP-3.17119079.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.87+254T>C|113|LOC_Os03g30010|protein_coding|CODING|LOC_Os03g30010.1|2|1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	17120722	SNP-3.17119535.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.34-149G>T|113|LOC_Os03g30010|protein_coding|CODING|LOC_Os03g30010.1|1|1)	GT	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	./.	0/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17123162	SNP-3.17121975.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	1/1	./.	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/1	0/0	1/1	0/0	0/1	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/1	1/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/1	1/1	1/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	./.	0/0
+3	17123460	SNP-3.17122273.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/1	1/1	0/0	./.	1/1	0/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	0/1	0/1	0/0	0/1	1/1	1/1	0/0	0/1	0/0	./.	./.	0/1	0/0	1/1	./.	./.	0/1	1/1	0/0	1/1	1/1	./.	1/1	./.	1/1	0/1	1/1	0/1	1/1	./.	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0
+3	17123994	SNP-3.17122807.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	./.	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17126152	SNP-3.17124965.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0
+3	17126775	SNP-3.17125588.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.177+173A>G|65|LOC_Os03g30020|protein_coding|CODING|LOC_Os03g30020.1|1|1)	GT	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/1	1/1	0/0	0/1	0/1	./.	./.	0/0	0/1	./.	0/0	0/0	0/1	0/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/1	0/0	1/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/1	./.	0/0	0/0	0/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	17127527	SNP-3.17126340.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/1	1/1	0/1	./.	1/1	0/1	1/1	1/1	0/0	1/1	1/1	0/1	0/1	0/1	1/1	1/1	1/1	1/1	0/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17128413	SNP-3.17127226.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/1	./.	./.	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/1	./.	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	0/1	./.	1/1	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/1	./.	0/1	0/1	0/1	0/1	0/1	0/0	./.	0/0	./.	0/1	0/1	0/0	./.	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	./.	./.	0/0	1/1	0/1
+3	17129150	SNP-3.17127963.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	17129302	SNP-3.17128115.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17130280	SNP-3.17129093.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/1	0/0	./.	./.	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/1	0/1	./.	1/1	0/0	0/0	1/1	0/0	0/1	./.	1/1	1/1	0/0	0/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	./.	0/0	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/1	./.	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	./.	0/1	0/1	0/1	1/1	0/0	1/1	0/0	0/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	./.	0/0	./.	0/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/1	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0
+3	17131818	SNP-3.17130631.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	1/1	0/0	0/0	0/1	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/1	0/1	0/1	0/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	./.	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/1	./.	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/1	./.	0/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	./.	0/1	./.	1/1	1/1	1/1	0/0	0/0	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/1	./.	0/0	0/0	0/0	0/0	0/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/1	0/1	0/0	1/1	0/1
+3	17131858	SNP-3.17130671.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/1	./.	0/0	0/0	1/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	0/1	0/0	0/0	0/0	0/0	./.	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17132905	SNP-3.17131718.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	1/1	0/0	0/1	0/0	1/1	0/1	0/1	./.	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/1	0/0	0/0	./.	0/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/1	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	./.	0/0	0/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	./.	0/0	1/1	0/0	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/1	0/1	0/1	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	1/1	0/0
+3	17133832	SNP-3.17132645.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17134497	SNP-3.17133310.	A	G	.	.	PR;EFF=synonymous_variant(LOW||gCt/gCt|p.Ala464Ala/c.1391T>C|504|LOC_Os03g30030|protein_coding|CODING|LOC_Os03g30030.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	./.	1/1	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	./.	1/1	./.	1/1	0/0	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	./.	./.	./.	1/1	./.	./.	./.	./.	./.	0/0	./.	./.	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	0/0	./.	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	17137062	SNP-3.17135875.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/1	0/0	0/1	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	./.	0/0	0/1	0/1	0/0	0/0	0/0	0/0	./.	./.	./.	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/1	1/1	./.	./.	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	./.	0/0	1/1	0/0	1/1	0/1	1/1	1/1	0/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	./.	0/1	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	./.	0/0	0/0	0/1	1/1	./.	0/0	0/1	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	1/1	0/0
+3	17138730	SNP-3.17137543.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/0	0/0	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	0/0	0/0	1/1	0/1	0/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	0/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0
+3	17140286	SNP-3.17139099.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	17140784	SNP-3.17139597.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	1/1	./.	0/1	./.	./.	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/1	1/1	0/1	0/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	1/1
+3	17143836	SNP-3.17142649.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aAc/aTc|p.Asn155Ile/c.464G>T|361|LOC_Os03g30060|protein_coding|CODING|LOC_Os03g30060.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	./.	./.	0/0	./.	./.	0/0	./.	1/1	1/1	0/0	./.	0/0	./.	0/0	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17158273	SNP-3.17157082.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/1	0/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	0/0	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0
+3	17162405	SNP-3.17161214.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.307-167G>T|193|LOC_Os03g30088|protein_coding|CODING|LOC_Os03g30088.1|2|1)	GT	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17162768	SNP-3.17161577.	C	A	.	.	PR;EFF=synonymous_variant(LOW||Ttg/Ttg|p.Leu63Leu/c.187G>T|193|LOC_Os03g30088|protein_coding|CODING|LOC_Os03g30088.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	./.	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	./.	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	./.	0/1	./.	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	./.	0/0	./.	1/1	0/0
+3	17165364	SNP-3.17164173.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0
+3	17167703	SNP-3.17166512.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	1/1	0/0	./.	./.	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1
+3	17168660	SNP-3.17167469.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	0/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	17170058	SNP-3.17168867.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	1/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/1	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/0	1/1
+3	17171398	SNP-3.17170207.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17175832	SNP-3.17174641.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	0/0	./.	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	./.	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17177886	SNP-3.17176695.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	./.	0/1	0/0	0/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	./.	./.	./.	0/0	0/0	0/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17177922	SNP-3.17176731.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0
+3	17178542	SNP-3.17177351.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	./.	./.	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	./.	0/0	./.	./.	0/0	1/1	./.	./.	0/0	./.	0/0	./.	1/1	./.	./.	./.	1/1	1/1	1/1	./.	0/0	1/1	./.	1/1	1/1	./.	./.	1/1	./.	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	17180744	SNP-3.17179553.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aTg/aGg|p.Met447Arg/c.1340A>G|621|LOC_Os03g30100|protein_coding|CODING|LOC_Os03g30100.1|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	1/1	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	./.	./.	./.	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	./.	0/0	./.	0/0	0/0	./.	./.	./.	0/0	1/1	./.	./.	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	./.	0/0
+3	17180764	SNP-3.17179573.	A	G	.	.	PR;EFF=synonymous_variant(LOW||Gag/Gag|p.Glu454Glu/c.1360A>G|621|LOC_Os03g30100|protein_coding|CODING|LOC_Os03g30100.1|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	./.	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	./.	1/1	./.	./.	1/1	1/1	./.	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	0/0	./.	./.	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	./.	1/1	./.	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	17180994	SNP-3.17179803.	A	G	.	.	PR;EFF=synonymous_variant(LOW||ctG/ctG|p.Leu530Leu/c.1590A>G|621|LOC_Os03g30100|protein_coding|CODING|LOC_Os03g30100.1|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	./.	1/1	./.	./.	0/0	./.	0/0	1/1	./.	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	./.	0/0	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1
+3	17185798	SNP-3.17184607.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Aca/Tca|p.Thr539Ser/c.1615G>T|1727|LOC_Os03g30110|protein_coding|CODING|LOC_Os03g30110.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	0/0	1/1	1/1	0/0	0/0	./.	1/1	0/0	./.	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	1/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	./.	./.	0/0	./.	0/0	./.	0/0	./.	./.	./.	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	./.	./.	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	./.	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	./.	./.	./.	./.	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	1/1	0/0
+3	17188092	SNP-3.17186901.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gGg/gTg|p.Gly59Val/c.176G>T|1727|LOC_Os03g30110|protein_coding|CODING|LOC_Os03g30110.1|1|1)	GT	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17190109	SNP-3.17188918.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	1/1	./.	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	0/0	1/1	1/1	./.	1/1	0/0	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	./.	./.	./.	./.	0/0	1/1	1/1	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1
+3	17190292	SNP-3.17189101.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	./.	0/0	./.	0/0	./.	0/0	1/1	./.	1/1	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	./.	./.	./.	1/1	./.	0/0	1/1	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0
+3	17194160	SNP-3.17192969.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	./.	./.	./.	0/0	./.	1/1	1/1	./.	0/0	0/0	./.	./.	./.	1/1	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	./.	./.	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	./.	./.	./.	1/1	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0	1/1	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17194174	SNP-3.17192983.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	1/1	./.	./.	0/0	./.	1/1	1/1	1/1	0/0	./.	1/1	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	./.	./.	0/0	./.	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	1/1	0/0	0/0	./.	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	1/1	1/1	0/0	./.	./.	1/1	0/0	0/0	./.	./.	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	./.	0/0	./.	./.	0/0	./.	./.	0/0	1/1	0/0	./.	./.	./.	0/0	1/1	./.	1/1	./.	0/0	./.	1/1	0/0	./.	1/1	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0
+3	17197639	SNP-3.17196448.	C	A	.	.	PR;EFF=synonymous_variant(LOW||Aag/Aag|p.Lys62Lys/c.184C>A|263|LOC_Os03g30120|protein_coding|CODING|LOC_Os03g30120.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	1/1	./.	./.	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	./.	1/1	1/1	./.	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0
+3	17198765	SNP-3.17197574.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0
+3	17199644	SNP-3.17198453.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/1	0/1	1/1	./.	0/1	1/1	1/1	0/0	./.	1/1	./.	1/1	./.	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	17199966	SNP-3.17198775.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1
+3	17201134	SNP-3.17199943.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/1	1/1	1/1	0/0	0/0	./.	1/1	./.	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	./.	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17202901	SNP-3.17201710.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	./.	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	1/1	1/1	0/1	0/1	0/1	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17204094	SNP-3.17202903.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	1/1	0/1	0/1	1/1	0/0	0/0	./.	1/1	0/1	0/0	0/0	./.	0/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	./.	1/1	0/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	./.	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	1/1	0/0	./.	0/0	0/1	0/0	./.	0/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17206153	SNP-3.17204962.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17206800	SNP-3.17205609.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	./.	./.	1/1	0/0	0/0	./.	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	./.	./.	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	1/1	./.	0/0	./.	./.	1/1	1/1	./.	0/0	0/0	1/1	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	0/0	1/1	./.	./.	./.	1/1	0/0	./.	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	./.	0/0	1/1	0/0	./.	1/1	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	1/1	./.	./.	./.	0/0	./.	1/1	0/0	1/1	./.	./.	0/0	./.	0/0	0/0	0/0	1/1	./.	1/1	1/1	./.	1/1	./.	0/0	./.	./.	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0
+3	17210461	SNP-3.17209270.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.-36-41G>T|360|LOC_Os03g30130|protein_coding|CODING|LOC_Os03g30130.1|1|1),intron_variant(MODIFIER|||c.-36-41G>T|360|LOC_Os03g30130|protein_coding|CODING|LOC_Os03g30130.2|1|1),intron_variant(MODIFIER|||c.-36-41G>T|377|LOC_Os03g30130|protein_coding|CODING|LOC_Os03g30130.3|1|1)	GT	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/1	0/1	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17210715	SNP-3.17209524.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	./.	0/0	0/0	1/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17211215	SNP-3.17210024.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/1	1/1	0/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	0/0	1/1	0/1	1/1	0/0	1/1	0/0	./.	0/1	1/1	./.	1/1	1/1	0/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17211277	SNP-3.17210086.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/1	0/0	./.	0/0	0/0	./.	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	./.	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	1/1	0/0
+3	17211985	SNP-3.17210794.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	./.	./.	1/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1
+3	17213124	SNP-3.17211933.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	./.	1/1	./.	1/1	./.	1/1	./.	1/1	0/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	1/1	0/0
+3	17213678	SNP-3.17212487.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aCt/aTt|p.Thr228Ile/c.683G>T|277|LOC_Os03g30150|protein_coding|CODING|LOC_Os03g30150.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME),splice_region_variant(LOW|||c.683G>T|277|LOC_Os03g30150|protein_coding|CODING|LOC_Os03g30150.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17217646	SNP-3.17216455.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	./.	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	0/0	./.	1/1	0/0	0/0	1/1	./.	0/0	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	./.	0/0	./.	1/1	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	0/0	1/1	0/0	1/1	1/1	0/0	./.	./.	./.	./.	0/0	0/0	./.	0/0	0/0	1/1	./.	./.	1/1	1/1	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	./.	0/0	./.	1/1
+3	17221550	SNP-3.17220359.	C	A	.	.	PR;EFF=synonymous_variant(LOW||atA/atA|p.Ile657Ile/c.1971C>A|828|LOC_Os03g30170|protein_coding|CODING|LOC_Os03g30170.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	./.	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	./.	0/0	./.	./.	./.	0/0	./.	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	./.	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	./.	1/1	1/1	0/0	1/1	./.	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	./.	0/0	1/1	./.	0/0	./.	0/0	0/0	./.	./.	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	./.	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0
+3	17228574	SNP-3.17227383.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	./.	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.	./.	1/1	1/1	./.	0/0	0/0	1/1	./.	0/0	1/1	./.	./.	0/0	./.	1/1	./.	./.	0/0	0/0	1/1	./.	1/1	./.	1/1	1/1	0/0	./.	./.	0/0	0/0	./.	./.	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	1/1	./.	./.	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	./.	1/1	0/0	0/0	./.	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	1/1	0/0	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	./.	./.	0/0	./.	1/1	./.	1/1	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0
+3	17229925	SNP-3.17228734.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	./.	./.	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	1/1	./.	1/1	./.	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	./.	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	./.	1/1	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1
+3	17236363	SNP-3.17235172.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/1	1/1	1/1	./.	0/0	./.	0/1	./.	0/0	./.	./.	./.	0/1	./.	0/0	0/0	./.	./.	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	1/1	0/1	./.	1/1	0/0	1/1	0/0	0/1	1/1	1/1	1/1	1/1	./.	0/1	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/1	0/0	1/1	1/1	0/0	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0
+3	17236799	SNP-3.17235608.	A	G	.	.	PR;EFF=synonymous_variant(LOW||gcG/gcG|p.Ala37Ala/c.111A>G|208|LOC_Os03g30200|protein_coding|CODING|LOC_Os03g30200.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW||gcG/gcG|p.Ala37Ala/c.111A>G|206|LOC_Os03g30200|protein_coding|CODING|LOC_Os03g30200.2|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/1	0/0	1/1	0/0	1/1	0/0	./.	./.	1/1	1/1	0/1	0/0	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	./.	./.	./.	1/1	./.	./.	0/1	./.	1/1	0/1	0/1	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	0/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	./.	1/1	./.	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	./.	1/1	0/0	0/1	./.	1/1	0/1	0/1	0/1	./.	0/1	0/0	./.	0/0	1/1	1/1	./.	1/1	./.	./.	0/1	./.	1/1	0/1	1/1	0/0	./.	0/0	1/1	1/1	0/1	./.	1/1	./.	./.	./.	./.	0/0	0/1	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1
+3	17240709	SNP-3.17239518.	A	G	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||3400|c.*75A>G|206|LOC_Os03g30200|protein_coding|CODING|LOC_Os03g30200.2|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME),3_prime_UTR_variant(MODIFIER||60|c.*60A>G|208|LOC_Os03g30200|protein_coding|CODING|LOC_Os03g30200.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/1	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/0	1/1	./.	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/1	0/0	0/0	0/0	0/0
+3	17240878	SNP-3.17239687.	A	G	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||3569|c.*244A>G|206|LOC_Os03g30200|protein_coding|CODING|LOC_Os03g30200.2|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME),3_prime_UTR_variant(MODIFIER||229|c.*229A>G|208|LOC_Os03g30200|protein_coding|CODING|LOC_Os03g30200.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	./.	./.	./.	./.	./.	0/0	./.	1/1	1/1	0/0	1/1	0/0	./.	0/0	./.	1/1	./.	1/1	1/1	./.	./.	./.	./.	./.	./.	./.	1/1	./.	./.	1/1	./.	./.	./.	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	0/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	./.	./.	1/1	0/0	./.	0/0	./.	1/1	./.	./.	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	./.	0/0	0/0	0/0	1/1	./.	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	./.	1/1	./.	0/0	1/1
+3	17248594	SNP-3.17247403.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cTc/cAc|p.Leu93His/c.278C>A|335|LOC_Os03g30220|protein_coding|CODING|LOC_Os03g30220.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	./.	./.	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	./.	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	1/1	./.	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	0/0	1/1	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	1/1	0/0
+3	17251999	SNP-3.17250808.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	./.	0/0	0/1	./.	1/1	./.	0/1	1/1	1/1	1/1	1/1	0/1	./.	1/1	1/1	./.	0/0	1/1	./.	./.	0/0	1/1	0/0	1/1	./.	./.	1/1	1/1	./.	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	17253025	SNP-3.17251834.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	1/1	./.	1/1	0/0	./.	1/1	./.	0/0	0/0	0/0	1/1	0/0	./.	./.	./.	./.	1/1	0/0	0/0	1/1	./.	./.	0/0	1/1	./.	./.	./.	0/0	0/0	./.	0/0	./.	./.	0/0	./.	0/0	./.	./.	./.	0/0	0/0	1/1	1/1	1/1	./.	./.	./.	./.	0/0	./.	1/1	1/1	1/1	./.	./.	./.	1/1	./.	./.	0/0	0/0	1/1	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	1/1	./.	1/1	./.	0/0	1/1	0/0	0/0	0/0	./.	./.	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	0/0	1/1	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	./.	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0
+3	17254178	SNP-3.17252987.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/1	./.	0/0	1/1	0/0	./.	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	./.	0/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17255297	SNP-3.17254106.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	0/0
+3	17257252	SNP-3.17256061.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	./.	./.	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/1	./.	0/1	0/1	1/1	0/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17257501	SNP-3.17256310.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	1/1	./.	./.	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	./.	1/1	./.	1/1	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	0/0	./.	./.	0/0	./.	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/0	./.	./.	0/0	./.	./.	./.	0/0	./.	0/0	./.	./.	1/1	1/1	0/0	1/1	1/1	1/1	./.	./.	./.	1/1	./.	0/0	0/0	0/0	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	./.	0/0	./.	0/0	1/1
+3	17257967	SNP-3.17256776.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/1	1/1	0/1	0/0	0/1	0/0	0/0	0/0	1/1	./.	./.	0/0	1/1	0/1	1/1	0/0	0/1	0/0	0/0	./.	0/0	./.	1/1	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	1/1	1/1	1/1	0/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	./.
+3	17260017	SNP-3.17258826.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	./.	0/1	0/1	0/1	0/1	./.	0/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	17260323	SNP-3.17259132.	A	G	.	.	PR;EFF=5_prime_UTR_variant(MODIFIER||178|c.-178A>G|468|LOC_Os03g30250|protein_coding|CODING|LOC_Os03g30250.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17261757	SNP-3.17260566.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.1120+43A>G|468|LOC_Os03g30250|protein_coding|CODING|LOC_Os03g30250.1|2|1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17264492	SNP-3.17263301.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.162+101T>C|458|LOC_Os03g30260|protein_coding|CODING|LOC_Os03g30260.1|2|1)	GT	0/0	./.	0/1	0/0	0/0	0/0	./.	0/1	0/0	./.	0/1	./.	0/1	1/1	./.	0/0	1/1	0/1	1/1	./.	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/1	0/0	./.	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17265206	SNP-3.17264015.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.83-534G>T|458|LOC_Os03g30260|protein_coding|CODING|LOC_Os03g30260.1|1|1)	GT	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17266180	SNP-3.17264989.	C	A	.	.	PR;EFF=5_prime_UTR_variant(MODIFIER||162|c.-162G>T|458|LOC_Os03g30260|protein_coding|CODING|LOC_Os03g30260.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17266653	SNP-3.17265462.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	0/1	./.	0/1	./.	0/1	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/1	./.	0/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	0/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	17267380	SNP-3.17266189.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17268078	SNP-3.17266887.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/1	1/1	0/0	0/1	0/0	0/1	0/1	0/1	1/1	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17270402	SNP-3.17269211.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	./.	./.	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	./.	1/1	0/1	0/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0
+3	17272125	SNP-3.17270934.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	1/1	0/0	1/1
+3	17273290	SNP-3.17272099.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	./.	1/1	0/0	./.	1/1	0/1	./.	1/1	./.	./.	0/1	0/1	1/1	1/1	1/1	1/1	./.	0/1	0/1	1/1	0/1	0/0	./.	1/1	./.	0/0	0/1	0/0	0/0	./.	./.	0/1	1/1	0/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	./.	1/1	0/1	1/1	0/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	0/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0
+3	17273462	SNP-3.17272271.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	./.	./.	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/1	1/1	0/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	./.	0/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0
+3	17275994	SNP-3.17274803.	C	A	.	.	PR;EFF=5_prime_UTR_variant(MODIFIER||7|c.-7C>A|254|LOC_Os03g30270|protein_coding|CODING|LOC_Os03g30270.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	1/1	1/1	0/1	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	./.
+3	17276108	SNP-3.17274917.	A	G	.	.	PR;EFF=synonymous_variant(LOW||ccG/ccG|p.Pro36Pro/c.108A>G|254|LOC_Os03g30270|protein_coding|CODING|LOC_Os03g30270.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	./.	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	./.	1/1	0/0	./.	./.	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	./.	0/0	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	./.	0/0	1/1	./.	0/0	./.	1/1	1/1	./.	0/0	0/0	./.	0/0	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	./.	./.	./.	./.	1/1	./.	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	./.	0/0	1/1
+3	17276840	SNP-3.17275649.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.375-233A>G|254|LOC_Os03g30270|protein_coding|CODING|LOC_Os03g30270.1|1|1)	GT	0/0	0/0	0/1	0/0	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17277250	SNP-3.17276059.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.480+72A>G|254|LOC_Os03g30270|protein_coding|CODING|LOC_Os03g30270.1|2|1)	GT	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0
+3	17278027	SNP-3.17276836.	C	A	.	.	PR;EFF=synonymous_variant(LOW||aAc/aAc|p.Asn247Asn/c.740C>A|254|LOC_Os03g30270|protein_coding|CODING|LOC_Os03g30270.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	./.	1/1	0/0	1/1	1/1	./.	1/1	./.	./.	1/1	./.	0/1	1/1	1/1	1/1	1/1	0/1	0/1	0/0	./.	./.	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/1	0/1	0/1	./.	0/1	0/1	./.	1/1	0/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/1	./.	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	17278691	SNP-3.17277500.	A	G	.	.	PR;EFF=synonymous_variant(LOW||Cag/Cag|p.Gln144Gln/c.430T>C|171|LOC_Os03g30280|protein_coding|CODING|LOC_Os03g30280.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	1/1	./.	1/1	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	./.	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	1/1	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0
+3	17278757	SNP-3.17277566.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Ggt/Cgt|p.Gly122Arg/c.364T>C|171|LOC_Os03g30280|protein_coding|CODING|LOC_Os03g30280.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17279274	SNP-3.17278083.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/1	0/1	1/1	1/1	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0
+3	17282773	SNP-3.17281582.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	./.	0/0	./.	./.	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	./.	./.	./.	0/0	./.	./.	1/1	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	./.	0/0	0/0	./.	1/1
+3	17285432	SNP-3.17284241.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	0/0	0/0	0/0	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/1	./.	0/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17287490	SNP-3.17286299.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	./.	0/0	./.	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	./.	0/0	0/0	0/0	./.	./.	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	./.	0/0	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	./.	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	./.	1/1	1/1	0/0	./.	1/1	0/0	./.	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1
+3	17294126	SNP-3.17292935.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/1	0/1	0/1	0/1	0/1	0/1	0/0	0/1	1/1	0/1	0/0	0/1	0/0	0/1	0/0	0/1	0/1	0/1	0/1	0/1	0/0	0/1	0/1	0/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/1	0/1	0/1	0/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	0/1	0/1	0/1	0/1	./.	./.	0/1	0/0	0/1	0/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/1	0/1	1/1	0/1	0/1	0/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/1	0/1	0/1	0/1	0/1	1/1	0/1	0/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	1/1	1/1	1/1	1/1	0/0	1/1
+3	17295161	SNP-3.17293970.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	./.	./.	1/1	0/0	./.	0/0	./.	1/1	1/1	1/1	./.	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	./.	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	17295666	SNP-3.17294475.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	./.	1/1	1/1	./.	1/1	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	17295669	SNP-3.17294478.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	./.	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	./.	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	1/1	1/1	./.	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	1/1	./.	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.
+3	17297158	SNP-3.17295967.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.126+81C>A|237|LOC_Os03g30320|protein_coding|CODING|LOC_Os03g30320.1|2|1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	./.	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	./.	./.	0/0	0/0	1/1	0/0	./.	0/0	./.	./.	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	./.	0/0	./.	0/0	1/1	./.	1/1	0/0	1/1	0/0	./.	./.	0/0	0/0	1/1	./.	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	./.	./.	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0
+3	17299097	SNP-3.17297906.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gGg/gAg|p.Gly127Glu/c.380C>A|237|LOC_Os03g30320|protein_coding|CODING|LOC_Os03g30320.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	./.	./.	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	./.	1/1	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	17299249	SNP-3.17298058.	C	A	.	.	PR;EFF=synonymous_variant(LOW||Aag/Aag|p.Lys165Lys/c.493C>A|237|LOC_Os03g30320|protein_coding|CODING|LOC_Os03g30320.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	./.	1/1	./.	./.	1/1	./.	0/0	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/1	./.	1/1	1/1	1/1	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	17301282	SNP-3.17300091.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/1	1/1	0/1	1/1	1/1	0/1	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	./.	0/1	1/1	1/1	0/1	1/1	0/1	./.	./.	./.	0/0	1/1	1/1	0/1	1/1	0/0	0/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	1/1
+3	17301393	SNP-3.17300202.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/1	0/0	0/0	0/1	0/0	0/0	0/1	0/1	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	./.	0/0	./.	0/0	0/1	1/1	1/1	./.	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0
+3	17302249	SNP-3.17301058.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0
+3	17302840	SNP-3.17301649.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17302866	SNP-3.17301675.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	1/1	./.	0/1	0/1	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/1	1/1	1/1	1/1	0/0	0/1	0/1	./.	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0
+3	17307301	SNP-3.17306110.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/1	./.	0/1	0/0	0/0	./.	0/0	0/1	0/0	1/1	./.	./.	0/0	0/1	./.	1/1	1/1	0/0	1/1	0/1	1/1	0/0	./.	1/1	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	17308836	SNP-3.17307645.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/1	0/0	1/1	0/1	0/0	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	./.	0/0
+3	17309669	SNP-3.17308478.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gAt/gGt|p.Asp204Gly/c.611A>G|999|LOC_Os03g30350|protein_coding|CODING|LOC_Os03g30350.1|1|1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17309756	SNP-3.17308565.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gGg/gAg|p.Gly233Glu/c.698C>A|999|LOC_Os03g30350|protein_coding|CODING|LOC_Os03g30350.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	./.	./.	1/1	0/0	0/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17310245	SNP-3.17309054.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Tct/Act|p.Ser374Thr/c.1120C>A|999|LOC_Os03g30350|protein_coding|CODING|LOC_Os03g30350.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/1	1/1	0/0
+3	17310890	SNP-3.17309699.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gGa/gAa|p.Gly494Glu/c.1481C>A|999|LOC_Os03g30350|protein_coding|CODING|LOC_Os03g30350.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	./.	1/1	0/1	./.	0/0	1/1	./.	0/0	0/0	./.	./.	./.	1/1	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/1	0/0	./.	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/1	0/0	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/1	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	0/0	1/1	0/1	0/0	0/1	./.	0/0	0/1	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/1	0/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17311820	SNP-3.17310629.	C	A	.	.	PR;EFF=synonymous_variant(LOW||ctA/ctA|p.Leu789Leu/c.2367C>A|999|LOC_Os03g30350|protein_coding|CODING|LOC_Os03g30350.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	./.	0/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	./.	1/1	0/0	1/1	1/1	0/1	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17312803	SNP-3.17311612.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gTa/gAa|p.Val34Glu/c.101C>A|627|LOC_Os03g30360|protein_coding|CODING|LOC_Os03g30360.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	0/0	1/1	0/1	0/0	0/0	./.	0/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	./.	0/1	1/1	1/1	./.	1/1	./.	0/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	./.	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	./.	0/1	1/1	./.	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0
+3	17313282	SNP-3.17312091.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.525+55A>G|627|LOC_Os03g30360|protein_coding|CODING|LOC_Os03g30360.1|1|1)	GT	1/1	./.	0/0	0/0	0/0	./.	./.	./.	0/0	./.	1/1	0/1	./.	./.	./.	0/0	./.	0/1	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/1	./.	0/1	0/1	0/0	0/1	0/0	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/1	1/1	0/1	./.	1/1	./.	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	./.	./.	0/0	./.	./.	1/1	0/0	1/1	0/0	./.	1/1	./.	0/1	./.	./.	1/1	./.	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1
+3	17315125	SNP-3.17313934.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ctC/ctG|p.Leu345Leu/c.1035A>G|627|LOC_Os03g30360|protein_coding|CODING|LOC_Os03g30360.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/1	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/1	0/0	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/1	0/0	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	./.	0/0	0/0	0/0	0/0
+3	17316053	SNP-3.17314862.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.1305-208C>A|627|LOC_Os03g30360|protein_coding|CODING|LOC_Os03g30360.1|4|1)	GT	0/0	./.	./.	1/1	1/1	0/0	0/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	./.	0/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	./.	0/0	1/1	0/0	1/1	0/1	0/0	0/1	./.	0/0	./.	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	./.	1/1	1/1	./.	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	./.	0/0	./.	./.	0/0
+3	17316246	SNP-3.17315055.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.1305-15C>A|627|LOC_Os03g30360|protein_coding|CODING|LOC_Os03g30360.1|4|1)	GT	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17316358	SNP-3.17315167.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Cgc/Ggc|p.Arg468Gly/c.1402A>G|627|LOC_Os03g30360|protein_coding|CODING|LOC_Os03g30360.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17316524	SNP-3.17315333.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cCa/cGa|p.Pro523Arg/c.1568A>G|627|LOC_Os03g30360|protein_coding|CODING|LOC_Os03g30360.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0
+3	17316583	SNP-3.17315392.	A	G	.	.	PR;EFF=synonymous_variant(LOW||Ggg/Ggg|p.Gly543Gly/c.1627A>G|627|LOC_Os03g30360|protein_coding|CODING|LOC_Os03g30360.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/1	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/1	1/1
+3	17316704	SNP-3.17315513.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gTa/gAa|p.Val583Glu/c.1748C>A|627|LOC_Os03g30360|protein_coding|CODING|LOC_Os03g30360.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	1/1	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	0/0	1/1	1/1	./.	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	./.	./.	1/1	./.	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17316770	SNP-3.17315579.	C	A	.	.	PR;EFF=stop_gained(HIGH|NONSENSE|tCa/tAa|p.Ser605*/c.1814C>A|627|LOC_Os03g30360|protein_coding|CODING|LOC_Os03g30360.1|5|1)	GT	./.	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/1	./.	./.	0/0	0/0	0/1	0/0	./.	0/0	0/1	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/1	./.	0/1	./.	0/0	./.	./.	./.	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/1	0/0	0/1	./.	0/0	0/0	0/1	1/1	0/0	./.	0/1	1/1	0/0	1/1	0/0	./.	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	0/0	0/0	0/1	./.	0/0
+3	17316808	SNP-3.17315617.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Gct/Act|p.Ala618Thr/c.1852C>A|627|LOC_Os03g30360|protein_coding|CODING|LOC_Os03g30360.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	1/1	./.	1/1	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	./.	0/0	./.	0/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/1	0/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	1/1	0/0	1/1	0/1	0/0	0/1	./.	0/0	0/0	./.	0/1	0/0	./.	./.	1/1	./.	1/1	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/1	0/0	0/1	0/1	1/1	./.
+3	17317090	SNP-3.17315899.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1
+3	17317120	SNP-3.17315929.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17317156	SNP-3.17315965.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/1	0/1	0/0	0/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17317611	SNP-3.17316420.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	./.	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	1/1	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	0/0	./.	./.	1/1	1/1	0/0	./.	./.	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	0/0	1/1	./.	./.	./.	0/0	1/1	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	1/1	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	0/0	./.
+3	17323813	SNP-3.17322622.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	./.	./.	./.	1/1	1/1	./.	1/1	1/1	0/0	./.	./.	./.	0/0	0/0	1/1	1/1	1/1	./.	./.	./.	1/1	./.	./.	0/0	1/1	1/1	1/1	1/1	0/0	./.	./.	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	0/0	1/1	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	./.	0/0	1/1
+3	17328763	SNP-3.17327572.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/0	1/1	0/1	0/1	0/1	0/1	./.	0/1	1/1	0/1	0/0	0/1	1/1	0/1	1/1	./.	0/0	./.	0/1	0/1	0/1	./.	1/1	0/1	./.	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/1	1/1	0/0	0/1	./.	0/1	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/1	1/1	./.	0/1	0/1	0/1	0/1	./.	0/1	1/1	0/1	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/1	0/0	./.	1/1	./.	0/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/1	1/1	0/0	./.	0/1	0/0	0/1	0/0	0/1	./.	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17329992	SNP-3.17328801.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17331753	SNP-3.17330562.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	./.	./.	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	./.	0/0	0/1	0/0	0/0	1/1	./.	./.	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	0/0	0/0	./.	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17332696	SNP-3.17331505.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	./.	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/1	0/0	0/1	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	1/1	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1
+3	17334445	SNP-3.17333254.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	./.	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0
+3	17337378	SNP-3.17336187.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/1	0/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17340602	SNP-3.17339411.	A	G	.	.	PR;EFF=stop_lost(HIGH|MISSENSE|tgA/tgC|p.Ter516Cysext*?/c.1548T>C|515|LOC_Os03g30420|protein_coding|CODING|LOC_Os03g30420.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	./.	1/1	./.	1/1	./.	1/1	0/0	1/1	./.	./.	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	0/1	0/0	1/1	1/1	0/1	./.	0/0	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	./.	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/1	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	0/0	1/1
+3	17342404	SNP-3.17341213.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	./.	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/1	0/1	1/1	0/0	./.	./.	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	./.	0/0	1/1	./.	1/1	0/0	1/1	./.	./.	1/1	./.	0/0	1/1	0/1	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	17343763	SNP-3.17342572.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/1	0/1	0/0	0/0	0/0	1/1	./.	0/0	0/1	0/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	./.	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/1	0/1	1/1	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17344512	SNP-3.17343321.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	0/1	0/0	./.	0/0	./.	./.	0/1	1/1	0/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0	./.	0/0	0/0	./.	1/1	0/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17349057	SNP-3.17347866.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.-22-422G>T|116|LOC_Os03g30430|protein_coding|CODING|LOC_Os03g30430.2|1|1),intron_variant(MODIFIER|||c.-22-422G>T|116|LOC_Os03g30430|protein_coding|CODING|LOC_Os03g30430.1|1|1)	GT	0/0	0/1	./.	1/1	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17349725	SNP-3.17348534.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.-23+698G>T|116|LOC_Os03g30430|protein_coding|CODING|LOC_Os03g30430.2|1|1),intron_variant(MODIFIER|||c.-23+703G>T|116|LOC_Os03g30430|protein_coding|CODING|LOC_Os03g30430.1|1|1)	GT	./.	./.	./.	1/1	./.	0/0	0/0	./.	1/1	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	./.	0/1	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	./.	0/0	0/1	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	17350375	SNP-3.17349184.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.-23+48G>T|116|LOC_Os03g30430|protein_coding|CODING|LOC_Os03g30430.2|1|1),intron_variant(MODIFIER|||c.-23+53G>T|116|LOC_Os03g30430|protein_coding|CODING|LOC_Os03g30430.1|1|1)	GT	0/0	1/1	./.	1/1	0/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	./.	./.	./.	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	0/1	1/1	1/1	./.	0/0	./.	0/0	1/1	./.	1/1	0/1	./.	./.	1/1	1/1	0/1	0/0	./.	./.	./.	1/1	1/1	1/1	./.	./.	0/1	./.	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	0/0	./.	0/0	0/0	./.	0/0
+3	17351193	SNP-3.17350002.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/1	0/0	./.	1/1	./.	1/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	17354614	SNP-3.17353423.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	0/0	0/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	0/1	./.	./.	./.	./.	0/0	./.	0/0	0/0	0/1	./.	0/0	./.	0/0	0/0	1/1	0/0	./.	./.	./.	1/1	0/0	0/1	0/0	0/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	./.	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	./.	./.	0/0	./.
+3	17356355	SNP-3.17355164.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.280-150T>C|173|LOC_Os03g30440|protein_coding|CODING|LOC_Os03g30440.1|4|1)	GT	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/1	./.	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/0	1/1	1/1	0/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	./.	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	./.	0/1	0/0	0/1	0/0	0/0	0/0	./.	0/0	./.	./.	0/1	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	1/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17357038	SNP-3.17355847.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.194-22T>C|173|LOC_Os03g30440|protein_coding|CODING|LOC_Os03g30440.1|3|1)	GT	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	./.	0/0	0/0	./.	0/0	./.	./.	1/1	1/1	./.	./.	./.	./.	./.	0/0	./.	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	1/1	0/0	0/0	./.	1/1	./.	./.	1/1	./.	1/1	./.	./.	./.	./.	0/0	0/0	./.	1/1	./.	0/0	./.	0/0	0/0	./.	./.	./.	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	./.	./.	./.	1/1	0/0	./.	1/1	./.	./.	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	./.	1/1	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/0	./.	0/0	0/0	1/1	./.	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	./.	1/1
+3	17357239	SNP-3.17356048.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.194-223T>C|173|LOC_Os03g30440|protein_coding|CODING|LOC_Os03g30440.1|3|1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	./.	./.	0/0
+3	17360156	SNP-3.17358965.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	1/1	./.	./.	./.	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	./.	./.	./.	0/0	1/1	0/0	./.	./.	1/1	1/1	0/0	1/1	./.	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	0/0	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	1/1
+3	17360361	SNP-3.17359170.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17361360	SNP-3.17360169.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	./.	./.	./.	0/0	0/0	./.	./.	0/0	./.	./.	0/0	./.	0/0	./.	./.	0/0	./.	./.	0/0	./.	./.	0/0	./.	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	1/1
+3	17363340	SNP-3.17362149.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	1/1	./.	1/1	./.	./.	0/0	1/1	./.	1/1	0/0	./.	1/1	0/1	0/0	1/1	./.	1/1	./.	1/1	1/1	./.	0/1	./.	./.	1/1	./.	./.	0/1	0/1	./.	./.	1/1	./.	./.	1/1	./.	1/1	1/1	0/1	0/1	./.	0/1	./.	1/1	1/1	./.	1/1	1/1	./.	0/1	1/1	1/1	./.	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	./.	./.	1/1	./.	./.	0/0	1/1	./.	./.	./.	0/0	1/1	1/1	1/1	1/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1
+3	17363396	SNP-3.17362205.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	./.	0/0	0/0	1/1	0/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/1	0/0	./.	./.	0/0	./.	0/0	./.	0/0	0/1	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/1	0/0	0/0	1/1	0/0
+3	17363628	SNP-3.17362437.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	./.	1/1	./.	0/0	0/0	1/1	./.	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	./.	./.	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	./.	0/0	0/0	1/1	0/0	0/0	./.	./.	1/1	./.	./.	1/1	0/0	./.	./.	1/1	./.	./.	./.	./.	./.	./.	./.	0/0	./.	./.	./.	1/1	./.	1/1	1/1	./.	0/0	1/1	1/1	0/0	./.	./.	0/0	./.	./.	0/0	./.	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	./.	./.	1/1	1/1	1/1	./.	./.	./.	1/1	0/0	./.	./.	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	./.	./.	1/1	./.	0/0	0/0	0/0	./.	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	./.	./.	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	1/1	./.	0/0	1/1
+3	17368872	SNP-3.17367681.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.1423+687T>C|1543|LOC_Os03g30450|protein_coding|CODING|LOC_Os03g30450.1|3|1)	GT	1/1	1/1	1/1	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	0/0	1/1	./.	0/0	0/1	./.	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/1	0/0	./.	./.	1/1	./.	0/0	1/1	1/1	1/1	0/1	./.	./.	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	17370258	SNP-3.17369067.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Agg/Tgg|p.Arg242Trp/c.724G>T|1543|LOC_Os03g30450|protein_coding|CODING|LOC_Os03g30450.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	0/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	0/0	1/1	1/1	1/1	./.	0/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	0/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	17371659	SNP-3.17370468.	C	A	.	.	PR;EFF=synonymous_variant(LOW||gTg/gTg|p.Val82Val/c.245G>T|1543|LOC_Os03g30450|protein_coding|CODING|LOC_Os03g30450.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	./.	./.	1/1	0/1	./.	./.	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/1	0/0	1/1	0/0	1/1	./.	0/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	1/1	./.	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	./.	0/0	0/1	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	17371724	SNP-3.17370533.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.199-19T>C|1543|LOC_Os03g30450|protein_coding|CODING|LOC_Os03g30450.1|1|1)	GT	./.	0/1	0/1	0/0	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	0/1	./.	./.	0/0	1/1	./.	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17371751	SNP-3.17370560.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.199-46T>C|1543|LOC_Os03g30450|protein_coding|CODING|LOC_Os03g30450.1|1|1)	GT	1/1	0/1	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	1/1	0/1	1/1	./.	1/1	1/1	./.	1/1	1/1	./.	0/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/0	1/1	./.	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	1/1
+3	17373470	SNP-3.17372279.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	./.	./.	1/1	0/0	1/1	1/1	./.	./.	./.	1/1	./.	./.	./.	1/1	1/1	1/1	./.	./.	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	./.	./.	./.	./.	1/1	./.	1/1	1/1	./.	./.	./.	0/0	./.	1/1	0/0	1/1	./.	1/1	1/1	./.	./.	1/1	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	./.	0/0	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	./.	0/0	./.	0/0	./.	./.	0/0	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	1/1	0/0	./.
+3	17376074	SNP-3.17374883.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/1	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/1	0/0	0/0	0/0	1/1	1/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1
+3	17376185	SNP-3.17374994.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	./.	0/0	0/0	0/0	0/1	0/1	0/0	0/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/1	./.	0/0	1/1	0/1	1/1	0/0	1/1	1/1	0/1	0/1	1/1	1/1	1/1	0/1	./.	1/1	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	./.	./.	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	./.	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	0/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0
+3	17376429	SNP-3.17375238.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/1	1/1	0/0	1/1
+3	17381846	SNP-3.17380655.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.765-145G>T|702|LOC_Os03g30460|protein_coding|CODING|LOC_Os03g30460.1|8|1)	GT	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	1/1	./.	0/0	./.	0/1	0/0	0/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0
+3	17383050	SNP-3.17381859.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.672+283T>C|702|LOC_Os03g30460|protein_coding|CODING|LOC_Os03g30460.1|7|1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17383188	SNP-3.17381997.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.672+145G>T|702|LOC_Os03g30460|protein_coding|CODING|LOC_Os03g30460.1|7|1)	GT	0/0	./.	./.	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17384655	SNP-3.17383464.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.448-339G>T|702|LOC_Os03g30460|protein_coding|CODING|LOC_Os03g30460.1|5|1)	GT	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17386362	SNP-3.17385171.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.165+57T>C|702|LOC_Os03g30460|protein_coding|CODING|LOC_Os03g30460.1|2|1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1
+3	17390430	SNP-3.17389239.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/1	0/0	0/0	0/0	./.	0/1	0/0	1/1	1/1	./.	./.	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17391793	SNP-3.17390602.	C	A	.	.	PR;EFF=synonymous_variant(LOW||gAc/gAc|p.Asp313Asp/c.938C>A|326|LOC_Os03g30470|protein_coding|CODING|LOC_Os03g30470.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	0/1	0/0	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17393979	SNP-3.17392788.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	./.	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	17394776	SNP-3.17393585.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	1/1	1/1	./.	0/0	./.	1/1	./.	0/0	./.	1/1	./.	./.	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/1	0/1	1/1	0/0	1/1	1/1	0/0	./.	./.	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	17397474	SNP-3.17396283.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/1	1/1	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/1	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	./.	./.	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	./.	0/1	1/1	0/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17399578	SNP-3.17398387.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	0/0	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	./.	./.	0/0	0/0	./.	./.	./.	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	./.	./.	1/1	./.	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	1/1	1/1	./.	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	1/1	./.	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	./.	./.	./.	0/0	1/1	./.	1/1	./.	0/0	0/0	0/0	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	./.	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	./.	./.	./.	1/1	./.	1/1	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	1/1	./.	0/0	1/1
+3	17404250	SNP-3.17403059.	A	G	.	.	PR;EFF=synonymous_variant(LOW||gcG/gcG|p.Ala138Ala/c.414A>G|813|LOC_Os03g30510|protein_coding|CODING|LOC_Os03g30510.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	./.	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	1/1
+3	17404496	SNP-3.17403305.	A	G	.	.	PR;EFF=synonymous_variant(LOW||cgG/cgG|p.Arg220Arg/c.660A>G|813|LOC_Os03g30510|protein_coding|CODING|LOC_Os03g30510.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/1	0/1	0/1	0/0	./.	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	1/1	0/1	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1	0/1	1/1	0/0	0/1	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1
+3	17404634	SNP-3.17403443.	A	G	.	.	PR;EFF=synonymous_variant(LOW||aaG/aaG|p.Lys266Lys/c.798A>G|813|LOC_Os03g30510|protein_coding|CODING|LOC_Os03g30510.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17404769	SNP-3.17403578.	A	G	.	.	PR;EFF=synonymous_variant(LOW||aaG/aaG|p.Lys311Lys/c.933A>G|813|LOC_Os03g30510|protein_coding|CODING|LOC_Os03g30510.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	./.	0/0	0/0	0/0	1/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17405633	SNP-3.17404442.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cTa/cAa|p.Leu378Gln/c.1133C>A|813|LOC_Os03g30510|protein_coding|CODING|LOC_Os03g30510.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/1	0/1	./.	0/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17407227	SNP-3.17406036.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Ctc/Atc|p.Leu480Ile/c.1438C>A|813|LOC_Os03g30510|protein_coding|CODING|LOC_Os03g30510.1|6|1)	GT	0/0	./.	0/1	1/1	0/1	0/0	./.	./.	0/1	./.	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/1	./.	0/0	0/0	0/1	0/0	0/0	./.	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/1	0/1	0/0	0/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/0	./.	0/1	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/1	1/1	0/1	0/1	./.	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	./.	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/1	0/0	./.	0/0	0/1	0/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	./.	0/0	0/0	1/1	0/0
+3	17407646	SNP-3.17406455.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|gaG/gaA|p.Glu523Glu/c.1569C>A|813|LOC_Os03g30510|protein_coding|CODING|LOC_Os03g30510.1|7|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/1	0/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17407766	SNP-3.17406575.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|acG/acA|p.Thr563Thr/c.1689C>A|813|LOC_Os03g30510|protein_coding|CODING|LOC_Os03g30510.1|7|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17407784	SNP-3.17406593.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|cgT/cgA|p.Arg569Arg/c.1707C>A|813|LOC_Os03g30510|protein_coding|CODING|LOC_Os03g30510.1|7|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	./.	1/1	0/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/1	1/1	0/0	1/1	0/1	./.	./.	0/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	./.	0/0	0/1	0/1	./.	1/1	1/1	./.	./.	0/0	0/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0
+3	17408862	SNP-3.17407671.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Cat/Gat|p.His795Asp/c.2383A>G|813|LOC_Os03g30510|protein_coding|CODING|LOC_Os03g30510.1|11|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/1	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17408911	SNP-3.17407720.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aCg/aGg|p.Thr811Arg/c.2432A>G|813|LOC_Os03g30510|protein_coding|CODING|LOC_Os03g30510.1|11|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	./.	0/0	1/1	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17410405	SNP-3.17409214.	A	G	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||1822|c.*1822T>C|158|LOC_Os03g30519|protein_coding|CODING|LOC_Os03g30519.1|2|1),intron_variant(MODIFIER|||c.*824-119T>C|158|LOC_Os03g30519|protein_coding|CODING|LOC_Os03g30519.2|2|1)	GT	0/1	./.	./.	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	1/1	0/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	0/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1
+3	17411943	SNP-3.17410752.	A	G	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||284|c.*284T>C|158|LOC_Os03g30519|protein_coding|CODING|LOC_Os03g30519.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME),3_prime_UTR_variant(MODIFIER||284|c.*284T>C|158|LOC_Os03g30519|protein_coding|CODING|LOC_Os03g30519.2|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/1	./.	0/1	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/1	1/1	1/1	0/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/0	1/1
+3	17412479	SNP-3.17411288.	C	A	.	.	PR;EFF=splice_region_variant(LOW|||c.450G>T|158|LOC_Os03g30519|protein_coding|CODING|LOC_Os03g30519.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),splice_region_variant(LOW|||c.450G>T|158|LOC_Os03g30519|protein_coding|CODING|LOC_Os03g30519.2|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW||gcT/gcT|p.Ala150Ala/c.450G>T|158|LOC_Os03g30519|protein_coding|CODING|LOC_Os03g30519.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW||gcT/gcT|p.Ala150Ala/c.450G>T|158|LOC_Os03g30519|protein_coding|CODING|LOC_Os03g30519.2|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/0	./.	./.	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	./.	./.	./.	./.	1/1	0/0	./.	1/1	./.	./.	./.	0/0	./.	0/0	./.	./.	./.	0/0	./.	0/0	./.	0/0	1/1	1/1	./.	./.	./.	0/0	1/1	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0
+3	17415865	SNP-3.17414646.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	1/1	./.	1/1	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	./.	./.	./.	0/0	./.	1/1	0/0	./.	./.	0/0	./.	0/0	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	./.	./.	0/0	1/1	./.	0/0	./.	0/0	./.	0/0	1/1	0/0	./.	0/0	./.	0/0	./.	0/0	./.	1/1	./.	./.	./.	./.	./.	./.	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0
+3	17419157	SNP-3.17417938.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	./.	0/0	./.	1/1	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	1/1	./.	1/1	0/0	1/1	./.	./.	1/1	./.	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	./.	0/0	1/1	./.	./.	1/1	0/0	./.	./.	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	./.	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	1/1	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	0/0	./.
+3	17421689	SNP-3.17420470.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17421863	SNP-3.17420644.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	./.	1/1	0/0	0/1	0/0	1/1	0/0	./.	./.	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	./.	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	17425033	SNP-3.17423814.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Gtt/Att|p.Val604Ile/c.1810C>A|926|LOC_Os03g30530|protein_coding|CODING|LOC_Os03g30530.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME),missense_variant(MODERATE|MISSENSE|Gtt/Att|p.Val603Ile/c.1807C>A|925|LOC_Os03g30530|protein_coding|CODING|LOC_Os03g30530.2|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME),missense_variant(MODERATE|MISSENSE|Gtt/Att|p.Val603Ile/c.1807C>A|652|LOC_Os03g30530|protein_coding|CODING|LOC_Os03g30530.3|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	1/1	./.	0/1	0/0	0/1	0/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	./.	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	17425659	SNP-3.17424440.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.2030-197C>A|926|LOC_Os03g30530|protein_coding|CODING|LOC_Os03g30530.1|4|1),intron_variant(MODIFIER|||c.2027-197C>A|925|LOC_Os03g30530|protein_coding|CODING|LOC_Os03g30530.2|4|1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17426889	SNP-3.17425670.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17428070	SNP-3.17426851.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	./.	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	./.	0/0	0/0	1/1	0/0
+3	17428506	SNP-3.17427287.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/1	0/1	0/1	./.	0/0	0/0	./.	0/1	./.	./.	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	./.	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/1	0/0	0/0	0/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/1	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	./.	./.	0/0	./.	0/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	./.	0/1	0/1	0/1	./.	0/0	0/1	./.	./.	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	./.	./.	1/1	1/1	1/1	0/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	./.	0/0	./.	0/0	1/1	./.	0/0	./.	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1
+3	17430551	SNP-3.17429332.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	./.	0/0	./.	1/1	1/1	0/0	0/1	0/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17431115	SNP-3.17429896.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17432522	SNP-3.17431303.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	0/0	./.	./.	1/1	0/0	1/1	./.	./.	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	./.	1/1	0/0	1/1	./.	0/0	1/1	0/0	./.	./.	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	1/1
+3	17433999	SNP-3.17432780.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17435638	SNP-3.17434419.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.-2-123C>A|488|LOC_Os03g30550|protein_coding|CODING|LOC_Os03g30550.1|1|1)	GT	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17436950	SNP-3.17435731.	C	A	.	.	PR;EFF=synonymous_variant(LOW||tcA/tcA|p.Ser268Ser/c.804C>A|488|LOC_Os03g30550|protein_coding|CODING|LOC_Os03g30550.1|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	1/1	0/1	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	./.	./.	1/1	1/1	1/1	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17439104	SNP-3.17437885.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0
+3	17442289	SNP-3.17441070.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	./.	1/1	0/0	1/1	./.	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	./.	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/1	./.	./.	./.	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	./.	0/0	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	1/1	0/1	./.	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1
+3	17443632	SNP-3.17442413.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17447735	SNP-3.17446516.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	1/1	0/0	./.	./.	0/1	./.	./.	1/1	./.	./.	0/1	1/1	0/1	1/1	./.	0/1	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	0/1	1/1	1/1	./.	./.	0/1	1/1	0/0	0/0	./.	./.	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0
+3	17448662	SNP-3.17447443.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	./.	1/1	./.	./.	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0
+3	17450790	SNP-3.17449571.	C	A	.	.	PR;EFF=splice_acceptor_variant(HIGH|||c.500C>A|234|LOC_Os03g30570|protein_coding|CODING|LOC_Os03g30570.2|2|1),intron_variant(MODIFIER|||c.500-1C>A|234|LOC_Os03g30570|protein_coding|CODING|LOC_Os03g30570.2|1|1),intron_variant(MODIFIER|||c.499+536C>A|307|LOC_Os03g30570|protein_coding|CODING|LOC_Os03g30570.1|1|1);LOF=(LOC_Os03g30570|LOC_Os03g30570|2|0.50)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17455247	SNP-3.17454028.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|gtG/gtC|p.Val6Val/c.18T>C|108|LOC_Os03g30580|protein_coding|CODING|LOC_Os03g30580.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	1/1	0/1	0/1	./.	0/0	0/1	./.	1/1	./.	./.	./.	1/1	0/0	0/1	1/1	0/1	./.	0/1	1/1	1/1	./.	0/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	1/1	0/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/1	1/1	./.	0/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	./.	./.	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17456410	SNP-3.17455191.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.-19+154T>C|108|LOC_Os03g30580|protein_coding|CODING|LOC_Os03g30580.1|1|1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	17457271	SNP-3.17456052.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/1	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	./.	0/1	0/0	0/0	./.	./.	0/0	0/0	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/1	0/0	0/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	17461457	SNP-3.17460238.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|agC/agG|p.Ser54Arg/c.162A>G|239|LOC_Os03g30600|protein_coding|CODING|LOC_Os03g30600.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	./.	1/1	0/0	1/1	0/0	./.	0/0	./.	./.	./.	./.	0/0	0/0	1/1	1/1	1/1	./.	./.	./.	./.	./.	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	0/0	1/1	0/0	./.	./.	0/0	./.	0/0	1/1	1/1	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	1/1	./.	./.	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	1/1	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	./.
+3	17461629	SNP-3.17460410.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Ttg/Atg|p.Leu112Met/c.334C>A|239|LOC_Os03g30600|protein_coding|CODING|LOC_Os03g30600.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	./.	./.	1/1	./.	1/1	./.	0/0	1/1	./.	0/0	1/1	0/0	./.	0/0	1/1	./.	./.	./.	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17461871	SNP-3.17460652.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|gcG/gcA|p.Ala192Ala/c.576C>A|239|LOC_Os03g30600|protein_coding|CODING|LOC_Os03g30600.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/1	1/1	./.	./.	0/0	1/1	0/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	0/1	0/1	0/0	./.	1/1	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/1	0/1	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	./.	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/1	./.	0/0	./.	0/0	1/1	0/0	0/0	0/1	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	0/1	0/0	./.	0/0	./.	./.	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	./.	0/1	0/0	1/1	0/0
+3	17462093	SNP-3.17460874.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	17462213	SNP-3.17460994.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	0/1	0/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17462855	SNP-3.17461636.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	./.	0/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17464258	SNP-3.17463039.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/1	0/1	0/1	0/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	1/1	1/1	./.	0/1	1/1	0/0	0/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	17465300	SNP-3.17464081.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/1	0/0	0/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/1	./.	0/1	1/1	1/1	./.	./.	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17466511	SNP-3.17465292.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|tcC/tcT|p.Ser260Ser/c.780G>T|314|LOC_Os03g30620|protein_coding|CODING|LOC_Os03g30620.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	./.	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	./.	./.	0/0	1/1	1/1	0/0	1/1	./.	0/0	./.	./.	1/1	1/1	./.	1/1	./.	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	17466634	SNP-3.17465415.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aaG/aaT|p.Lys219Asn/c.657G>T|314|LOC_Os03g30620|protein_coding|CODING|LOC_Os03g30620.1|1|1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	./.	./.	0/0	./.	1/1	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	0/0	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	1/1	0/0	./.	0/0	./.	./.	./.	./.	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	./.	./.	./.	0/0
+3	17467370	SNP-3.17466151.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	./.	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	./.	0/0	./.	0/0	1/1	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	./.	./.	0/0	1/1	./.
+3	17467718	SNP-3.17466499.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17467753	SNP-3.17466534.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	./.	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	./.	0/0	1/1	./.	0/0	./.	./.	1/1	1/1	./.	./.	./.	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	1/1	./.	./.	1/1	1/1	0/0	./.	1/1	0/0	1/1	1/1	./.	./.	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17468835	SNP-3.17467616.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	./.	1/1	1/1	0/0	./.	./.	./.	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/1	1/1	1/1	0/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	./.	1/1	./.	./.	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0
+3	17474014	SNP-3.17472795.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.548+325G>T|199|LOC_Os03g30650|protein_coding|CODING|LOC_Os03g30650.1|1|1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	./.	0/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17476491	SNP-3.17475272.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	./.	./.	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0
+3	17480016	SNP-3.17478797.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	./.	0/0	./.	0/0	./.	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	1/1	0/0	./.	./.	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	./.	./.	./.	./.	./.	1/1	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	0/0	0/0	./.	0/0	1/1	./.	1/1	0/0	./.	1/1	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	./.	0/0
+3	17488862	SNP-3.17487643.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.56-494A>G|409|LOC_Os03g30700|protein_coding|CODING|LOC_Os03g30700.1|1|1)	GT	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	./.	./.	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	./.	./.	0/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/1	./.	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	1/1	./.	0/1	./.	0/0	./.	./.	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/1	./.	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	1/1	1/1	./.	./.	./.	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	0/0	1/1
+3	17489382	SNP-3.17488163.	C	A	.	.	PR;EFF=synonymous_variant(LOW||Acc/Acc|p.Thr28Thr/c.82C>A|409|LOC_Os03g30700|protein_coding|CODING|LOC_Os03g30700.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	1/1	1/1	1/1	./.	./.	1/1	0/0	./.	1/1	1/1	1/1	./.	1/1	1/1	./.	0/1	1/1	0/0	1/1	1/1	./.	./.	./.	1/1	1/1	0/0	1/1	./.	1/1	0/0	./.	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	./.	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17489992	SNP-3.17488773.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aTg/aGg|p.Met231Arg/c.692A>G|409|LOC_Os03g30700|protein_coding|CODING|LOC_Os03g30700.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0
+3	17493182	SNP-3.17491963.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	./.	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	0/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	0/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/1	./.	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/1	1/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/1	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/0	0/1
+3	17493629	SNP-3.17492410.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/1	1/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17493657	SNP-3.17492438.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0
+3	17506280	SNP-3.17505061.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/1	0/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	17506439	SNP-3.17505220.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17506741	SNP-3.17505522.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/1	./.	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	./.	1/1	0/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/1	1/1	./.	0/0	./.	./.	0/1	0/1	0/1	0/1	1/1	0/1	0/1	0/0	./.	0/0	0/1	0/0	1/1	0/1	0/0	./.	1/1	1/1	0/1	0/1	1/1	1/1	1/1	0/0	0/1	0/1	0/1	1/1	0/0	0/1	1/1	1/1	0/1	1/1	./.	./.	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	1/1	1/1	1/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	./.	0/1	0/1	0/0	1/1
+3	17507104	SNP-3.17505885.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/1	1/1	./.	0/1	1/1	0/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	0/0	0/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	0/0	1/1	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	0/1
+3	17508035	SNP-3.17506816.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17508310	SNP-3.17507091.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gCt/gGt|p.Ala7Gly/c.20A>G|361|LOC_Os03g30720|protein_coding|CODING|LOC_Os03g30720.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17508325	SNP-3.17507106.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cGc/cAc|p.Arg12His/c.35C>A|361|LOC_Os03g30720|protein_coding|CODING|LOC_Os03g30720.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/1	0/0	./.	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	0/0	1/1	0/0	0/0	./.	0/1	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0
+3	17509187	SNP-3.17507968.	C	A	.	.	PR;EFF=synonymous_variant(LOW||ctA/ctA|p.Leu263Leu/c.789C>A|361|LOC_Os03g30720|protein_coding|CODING|LOC_Os03g30720.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/1	./.	./.	0/0	0/0	0/0	0/0	0/1	1/1	./.	0/0	0/0	0/0	0/1	1/1	0/1	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/1	./.	0/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	0/0	0/1	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17509214	SNP-3.17507995.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|caC/caG|p.His272Gln/c.816A>G|361|LOC_Os03g30720|protein_coding|CODING|LOC_Os03g30720.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	1/1	1/1	0/1	./.	1/1	1/1	1/1	./.	1/1	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	./.	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	0/0	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	0/0	1/1
+3	17509298	SNP-3.17508079.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gaC/gaG|p.Asp300Glu/c.900A>G|361|LOC_Os03g30720|protein_coding|CODING|LOC_Os03g30720.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/1	0/0	./.	0/0	./.	1/1	0/0	0/1	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	17509481	SNP-3.17508262.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|tgC/tgG|p.Cys361Trp/c.1083A>G|361|LOC_Os03g30720|protein_coding|CODING|LOC_Os03g30720.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1
+3	17511061	SNP-3.17509842.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.280-39C>A|259|LOC_Os03g30730|protein_coding|CODING|LOC_Os03g30730.1|2|1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	./.	1/1	1/1	1/1	./.	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/1	1/1	./.	0/0	1/1	0/0	1/1	0/1	1/1	1/1	0/1	./.	1/1	1/1	1/1	0/0	0/1	./.	1/1	1/1	1/1	./.	1/1	./.	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/1	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/1	1/1	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	./.	0/0	1/1	1/1	0/0	1/1	./.	./.	./.	1/1	./.	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17511335	SNP-3.17510116.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.395+120C>A|259|LOC_Os03g30730|protein_coding|CODING|LOC_Os03g30730.1|3|1)	GT	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	0/1	1/1	0/0	1/1	1/1	0/1	1/1	0/1	0/0	./.	0/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	./.	./.	0/0	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/0	./.	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	1/1	0/0
+3	17511446	SNP-3.17510227.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.396-30C>A|259|LOC_Os03g30730|protein_coding|CODING|LOC_Os03g30730.1|3|1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	./.	1/1	./.	./.	./.	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0
+3	17511694	SNP-3.17510475.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.545+69C>A|259|LOC_Os03g30730|protein_coding|CODING|LOC_Os03g30730.1|4|1)	GT	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/1	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	./.	0/0	0/0	0/0	1/1	0/1	0/0	./.	0/0	0/0	0/0	0/1	1/1	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/1	0/0	1/1	1/1	0/0	1/1	./.	0/0	0/0	./.	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	./.	1/1	0/0	0/1	0/0	./.	0/1	1/1	0/0	1/1	./.	0/1	1/1	./.	1/1	0/1	1/1	./.	1/1	1/1	0/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	./.	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/1	0/1	0/0
+3	17512310	SNP-3.17511091.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|aaG/aaA|p.Lys232Lys/c.696C>A|259|LOC_Os03g30730|protein_coding|CODING|LOC_Os03g30730.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17512568	SNP-3.17511349.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17519704	SNP-3.17518485.	A	G	.	.	PR;EFF=splice_region_variant(LOW|||c.599T>C|436|LOC_Os03g30740|protein_coding|CODING|LOC_Os03g30740.1|4|1),intron_variant(MODIFIER|||c.598+7T>C|436|LOC_Os03g30740|protein_coding|CODING|LOC_Os03g30740.1|4|1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/1	0/0	./.	./.	0/0	./.	0/1	0/0	0/0	0/0	0/1	0/0	0/0	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/1	0/0	0/1	0/0	0/1	0/1	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/0	./.	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/1	1/1	0/0	1/1	0/0	1/1	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1
+3	17520597	SNP-3.17519378.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.125+39T>C|436|LOC_Os03g30740|protein_coding|CODING|LOC_Os03g30740.1|2|1)	GT	0/0	0/0	0/1	0/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/1	./.	1/1	./.	1/1	1/1	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0
+3	17520692	SNP-3.17519473.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|agC/agT|p.Ser23Ser/c.69G>T|436|LOC_Os03g30740|protein_coding|CODING|LOC_Os03g30740.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	./.	1/1	./.	1/1	0/1	0/0	1/1	1/1	1/1	0/1	0/0	1/1	./.	1/1	1/1	0/0	./.	0/1	0/0	0/1	./.	./.	0/0	0/1	./.	./.	0/1	0/1	./.	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	./.	0/0	1/1	0/1	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/1	0/0	./.	0/0	0/1	./.	0/1	0/0	./.	./.	1/1	0/0	0/0	0/1	./.	0/1	0/1	0/1	./.	0/1	0/1	0/0	0/0	./.	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	./.	./.	./.	./.	./.	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	./.	0/1	0/0	0/0	1/1	0/0
+3	17522136	SNP-3.17520917.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cCa/cAa|p.Pro72Gln/c.215C>A|92|LOC_Os03g30744|protein_coding|CODING|LOC_Os03g30744.1|2|1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	17523387	SNP-3.17522168.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17524099	SNP-3.17522880.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.148-220T>C|88|LOC_Os03g30750|protein_coding|CODING|LOC_Os03g30750.1|2|1)	GT	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	17524982	SNP-3.17523763.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.147+516G>T|88|LOC_Os03g30750|protein_coding|CODING|LOC_Os03g30750.1|2|1)	GT	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	1/1	0/0	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	./.	1/1	./.	./.	./.	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0
+3	17527062	SNP-3.17525843.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	./.	1/1	0/0	0/0	0/0	./.	1/1	./.	1/1	./.	./.	0/1	./.	./.	0/0	0/0	./.	0/0	1/1	./.	0/0	1/1	./.	0/0	./.	./.	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	./.	./.	0/0	./.	./.	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	./.	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	./.	./.	./.	./.	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0
+3	17527717	SNP-3.17526498.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	0/0	0/0	0/0	./.	1/1	0/1	1/1	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	./.	0/0	1/1	0/0
+3	17528096	SNP-3.17526877.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/1	1/1	0/0	1/1	./.	1/1	./.	0/0	0/0	./.	1/1	0/0	1/1	./.	0/0	1/1	0/0	1/1	1/1	0/0	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17529059	SNP-3.17527840.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/1	1/1	0/0	0/0	0/1	1/1	1/1	./.	1/1	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/1	./.	./.	./.	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	./.	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/1	0/0	./.	1/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/1	./.	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	./.	0/1	./.	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	./.	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	./.	./.	1/1	0/0
+3	17532885	SNP-3.17531666.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	1/1	./.	./.	0/0	0/1	0/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	1/1	1/1	0/0	0/0	0/1	0/1	./.	0/1	1/1	0/1	0/1	0/1	0/1	0/1	0/1	1/1	./.	./.	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/1	0/1	0/0	1/1	0/1	1/1	./.	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/1	1/1	0/1	0/1	0/0	0/1	0/1	./.	0/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	0/1	./.	0/1	0/1	./.	0/0	1/1	0/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17533563	SNP-3.17532344.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	0/1	1/1	./.	./.	./.	1/1	0/1	0/1	1/1	./.	./.	./.	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	./.	./.	./.	0/0	./.	./.	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	./.	./.	./.	0/0	./.	0/1	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	./.	./.	1/1	0/0
+3	17534470	SNP-3.17533251.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0
+3	17535552	SNP-3.17534333.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gAt/gCt|p.Asp225Ala/c.674T>C|352|LOC_Os03g30760|protein_coding|CODING|LOC_Os03g30760.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/1	0/0	./.	0/0	0/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	17535974	SNP-3.17534755.	C	A	.	.	PR;EFF=synonymous_variant(LOW||ccT/ccT|p.Pro84Pro/c.252G>T|352|LOC_Os03g30760|protein_coding|CODING|LOC_Os03g30760.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17537337	SNP-3.17536118.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.24+617T>C|352|LOC_Os03g30760|protein_coding|CODING|LOC_Os03g30760.1|1|1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	17537864	SNP-3.17536645.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.24+90G>T|352|LOC_Os03g30760|protein_coding|CODING|LOC_Os03g30760.1|1|1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17539868	SNP-3.17538649.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	./.	0/0	1/1	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17544513	SNP-3.17543294.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/1	0/0	./.	1/1	0/0
+3	17548078	SNP-3.17546859.	C	A	.	.	PR;EFF=start_lost(HIGH|MISSENSE|aTg/aAg|p.Met1?/c.2C>A|135|LOC_Os03g30770|protein_coding|CODING|LOC_Os03g30770.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME);LOF=(LOC_Os03g30770|LOC_Os03g30770|1|1.00)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	1/1	0/0	./.	1/1	./.	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	./.	./.	./.	0/0	./.	0/0	./.	0/0	./.	./.	1/1	./.	0/0	./.	1/1	0/0	1/1	1/1	./.	1/1	./.	1/1	./.	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	17548141	SNP-3.17546922.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cCt/cGt|p.Pro22Arg/c.65A>G|135|LOC_Os03g30770|protein_coding|CODING|LOC_Os03g30770.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17549444	SNP-3.17548225.	C	A	.	.	PR;EFF=synonymous_variant(LOW||gAg/gAg|p.Glu108Glu/c.323C>A|137|LOC_Os03g30780|protein_coding|CODING|LOC_Os03g30780.2|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	1/1	0/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/1	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/1	./.	./.	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	./.	1/1	0/1	1/1	1/1	0/0	1/1	./.	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/1	0/0	0/0	0/1	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0
+3	17552952	SNP-3.17551733.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.573+23T>C|374|LOC_Os03g30790|protein_coding|CODING|LOC_Os03g30790.1|5|1)	GT	1/1	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	1/1	1/1	./.	0/0	./.	./.	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	./.	./.	./.	./.	1/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	./.	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	./.	0/0	./.	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	1/1	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	./.	./.	0/0	0/0	./.	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	./.	1/1	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	./.	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	./.	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	./.
+3	17554980	SNP-3.17553761.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.184-884G>T|374|LOC_Os03g30790|protein_coding|CODING|LOC_Os03g30790.1|1|1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17559872	SNP-3.17558653.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.293-183A>G|268|LOC_Os03g30800|protein_coding|CODING|LOC_Os03g30800.1|2|1)	GT	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/0	1/1
+3	17560581	SNP-3.17559362.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.346-59A>G|268|LOC_Os03g30800|protein_coding|CODING|LOC_Os03g30800.1|3|1)	GT	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/0	1/1	1/1	0/0	1/1	./.	1/1	0/1	0/0	./.	1/1	0/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0
+3	17561005	SNP-3.17559786.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ctG/ctA|p.Leu237Leu/c.711C>A|268|LOC_Os03g30800|protein_coding|CODING|LOC_Os03g30800.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/0	./.	0/0	0/0	0/1	0/0	./.	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	./.	0/0	0/0	1/1	0/0
+3	17561063	SNP-3.17559844.	A	G	.	.	PR;EFF=synonymous_variant(LOW||Gag/Gag|p.Glu257Glu/c.769A>G|268|LOC_Os03g30800|protein_coding|CODING|LOC_Os03g30800.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/1	0/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/1	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17561435	SNP-3.17560216.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	1/1	1/1	./.	0/0	./.	0/0	./.	1/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	./.	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	./.	0/0	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	./.	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	./.	0/0	./.	./.	1/1	./.	./.	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	./.	1/1	./.	0/0	0/0	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17561589	SNP-3.17560370.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/1	1/1	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/1	0/0	0/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/1	0/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0
+3	17561662	SNP-3.17560443.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	0/0	0/0	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/1	./.	./.	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/1	0/1	0/0	0/1	1/1	1/1	0/0	0/0	./.	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	./.	0/0	0/0	1/1	0/0
+3	17562785	SNP-3.17561566.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Aat/Tat|p.Asn830Tyr/c.2488G>T|1136|LOC_Os03g30810|protein_coding|CODING|LOC_Os03g30810.1|8|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17562831	SNP-3.17561612.	C	A	.	.	PR;EFF=synonymous_variant(LOW||taT/taT|p.Tyr814Tyr/c.2442G>T|1136|LOC_Os03g30810|protein_coding|CODING|LOC_Os03g30810.1|8|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	./.	0/1	0/0	./.	1/1	./.	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	17562934	SNP-3.17561715.	A	G	.	.	PR;EFF=synonymous_variant(LOW||gCg/gCg|p.Ala780Ala/c.2339T>C|1136|LOC_Os03g30810|protein_coding|CODING|LOC_Os03g30810.1|8|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	1/1	1/1	0/0	0/0	0/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/1	0/0	1/1	1/1	0/1	0/0	0/0	0/1	0/1	0/0	0/0	0/0	1/1	./.	0/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1
+3	17563063	SNP-3.17561844.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.2236-26G>T|1136|LOC_Os03g30810|protein_coding|CODING|LOC_Os03g30810.1|7|1)	GT	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	./.	0/1	./.	0/1	0/1	./.	0/1	0/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	0/0	1/1	0/0	./.	0/1	1/1	./.	./.	./.	0/0	1/1	./.	0/0	1/1	1/1	1/1	./.	./.	./.	./.	./.	1/1	1/1	1/1	1/1	0/0	./.	./.	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17563250	SNP-3.17562031.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Aca/Tca|p.Thr706Ser/c.2116G>T|1136|LOC_Os03g30810|protein_coding|CODING|LOC_Os03g30810.1|7|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17563979	SNP-3.17562760.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.1485-19G>T|1136|LOC_Os03g30810|protein_coding|CODING|LOC_Os03g30810.1|5|1)	GT	0/0	0/1	./.	1/1	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/1	0/1	0/1	./.	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/1	0/0	0/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/1	0/1	./.	0/1	0/1	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/1	0/1	1/1	0/0	./.	0/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0
+3	17564067	SNP-3.17562848.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.1485-107G>T|1136|LOC_Os03g30810|protein_coding|CODING|LOC_Os03g30810.1|5|1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	1/1	0/1	1/1	0/1	1/1	0/0	1/1	0/0	0/1	0/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	./.	./.	1/1	1/1	0/0	./.	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	17565100	SNP-3.17563881.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.912+51G>T|1136|LOC_Os03g30810|protein_coding|CODING|LOC_Os03g30810.1|2|1)	GT	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	0/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/1	./.	0/0	0/1	0/0	0/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	./.	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	./.	1/1	0/1	1/1	0/1	./.	./.	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	./.	./.	0/0	0/1	0/0	1/1	1/1	./.	1/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	./.	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/1	0/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/1	0/1	./.	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	./.	0/0	./.	1/1	0/0
+3	17565577	SNP-3.17564358.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cAg/cCg|p.Gln174Pro/c.521T>C|1136|LOC_Os03g30810|protein_coding|CODING|LOC_Os03g30810.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/1	1/1	0/0	./.	1/1	./.	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/1	1/1	./.	0/1	./.	0/0	./.	1/1	./.	./.	./.	./.	1/1	0/0	1/1	./.	0/1	./.	./.	1/1	1/1	1/1	1/1	./.	./.	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	./.	./.	1/1	1/1	1/1	./.	0/0	./.	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/1	./.	0/0	1/1	0/0	0/0	1/1	./.	./.	0/0	./.	1/1	./.	./.	./.	0/0	0/0	0/1	./.	./.	./.	./.	./.	./.	./.	1/1	0/1	1/1	./.	./.	0/0	./.	1/1	./.	1/1	0/0	./.	0/0	./.	0/0	./.	0/1	0/1	0/0	0/0	0/0	0/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	./.	1/1	0/0	1/1
+3	17566239	SNP-3.17565020.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	1/1	1/1	0/1	0/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0
+3	17569115	SNP-3.17567896.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/1	0/0	0/1	0/0	1/1	0/0	1/1	0/1	./.	0/1	0/1	1/1	0/1	0/0	0/1	0/1	./.	0/1	0/1	0/0	0/1	0/1	0/1	./.	0/1	./.	./.	0/1	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	1/1	1/1	0/1	0/1	0/0	0/1	0/1	1/1	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/1	0/1	0/1	./.	0/1	0/1	0/1	0/1	0/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/1	0/0	0/1	0/1	0/1	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	./.	./.	./.	./.	./.	0/0	0/0	1/1	./.	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	17569291	SNP-3.17568072.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	./.	0/1	0/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	./.	1/1	1/1	./.	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0
+3	17571662	SNP-3.17570443.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|cgG/cgC|p.Arg29Arg/c.87T>C|188|LOC_Os03g30830|protein_coding|CODING|LOC_Os03g30830.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	0/1	0/0	1/1	0/0	0/1	0/1	0/0	./.	0/0	./.	0/0	1/1	./.	0/0	1/1	0/0	1/1	./.	0/1	0/1	1/1	0/0	1/1	0/1	0/1	./.	1/1	0/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/1	./.	0/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/1	1/1	1/1	0/0	1/1	0/1	0/1	0/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17572718	SNP-3.17571499.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17575636	SNP-3.17574417.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	./.	0/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/1	0/1	0/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17576639	SNP-3.17575420.	A	G	.	.	PR;EFF=synonymous_variant(LOW||ggG/ggG|p.Gly39Gly/c.117A>G|179|LOC_Os03g30840|protein_coding|CODING|LOC_Os03g30840.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	./.	0/0	1/1	./.	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/1	0/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	0/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	./.	1/1	0/1	./.	./.	1/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	1/1	0/0	0/1	./.	./.	0/0	1/1	./.	./.	./.	0/1	./.	0/0	0/0	0/1	0/1	0/1	0/1	0/0	1/1	./.	0/1	0/0	0/0	1/1	./.	./.	0/0	0/1	1/1	0/1	0/0	0/1	0/1	1/1	0/0	0/1	0/0	1/1	0/1	1/1	0/0	0/0	0/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	./.	0/0	1/1
+3	17576948	SNP-3.17575729.	C	A	.	.	PR;EFF=synonymous_variant(LOW||tcA/tcA|p.Ser142Ser/c.426C>A|179|LOC_Os03g30840|protein_coding|CODING|LOC_Os03g30840.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	./.	0/1	0/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	0/1	0/1	0/0	./.	1/1	1/1	0/0	./.	0/0	0/1	0/0	0/1	0/1	1/1	0/1	0/0	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0
+3	17576971	SNP-3.17575752.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aCg/aGg|p.Thr150Arg/c.449A>G|179|LOC_Os03g30840|protein_coding|CODING|LOC_Os03g30840.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	./.	0/0	0/0	./.	1/1	0/1	0/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	./.	./.	1/1	./.	1/1	0/1	1/1	0/0	1/1	1/1	./.	./.	./.	./.	0/1	1/1	./.	./.	0/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	1/1	0/1	./.	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	./.	0/0	./.	0/0	./.	1/1	1/1	./.	0/1	0/1	0/0	0/0	1/1	1/1	./.	1/1	./.	./.	./.	0/0	0/1	0/1	1/1	0/1	0/1	0/0	0/1	./.	1/1	1/1	./.	./.	0/1	0/0	0/0	0/1	./.	1/1	1/1	0/0	0/0	0/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	./.	1/1	0/0	1/1
+3	17577331	SNP-3.17576112.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	1/1	0/0	0/0	0/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	0/1	0/0	0/1	./.	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	0/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	./.	1/1	1/1	./.	0/0	1/1	./.	0/1	0/0	1/1	0/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0
+3	17578832	SNP-3.17577613.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	1/1	0/0	0/1	0/1	./.	1/1	0/0	1/1	0/0	0/1	./.	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	./.	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	./.	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17579282	SNP-3.17578063.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/1	0/0	0/0	0/1	0/1	0/1	0/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17579520	SNP-3.17578301.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/1	0/0	1/1	0/0	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17580566	SNP-3.17579347.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17580647	SNP-3.17579428.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0
+3	17582407	SNP-3.17581188.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	1/1	1/1	./.	0/0	0/0	0/1	0/0	0/0	1/1	0/1	0/1	0/1	./.	1/1	1/1	0/1	./.	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	./.	0/0	0/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	./.	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	./.
+3	17588477	SNP-3.17587258.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gAg/gGg|p.Glu92Gly/c.275A>G|321|LOC_Os03g30870|protein_coding|CODING|LOC_Os03g30870.1|1|1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	0/1	1/1	0/1	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/1	1/1	0/0	0/0	./.	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	./.	0/1	./.	./.	1/1	0/0	1/1	1/1	0/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/1	0/0	./.
+3	17589116	SNP-3.17587897.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ggC/ggA|p.Gly291Gly/c.873C>A|321|LOC_Os03g30870|protein_coding|CODING|LOC_Os03g30870.1|2|1)	GT	0/0	0/1	0/1	1/1	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17590927	SNP-3.17589708.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	0/1	0/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/1	1/1	0/0	0/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	1/1	0/1	0/0	0/1	0/1	0/0	0/0	0/1	./.	./.	0/0	./.	1/1	./.	0/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	./.	./.	1/1	0/0
+3	17591211	SNP-3.17589992.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/1	./.	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	./.	0/0	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/1	./.	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	0/1	0/0	0/1	0/1	0/0	./.	0/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0
+3	17591506	SNP-3.17590287cg.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	./.	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	./.	./.	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	./.	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/1	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/1	0/0	./.	0/0	0/0	./.	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0
+3	17591879	SNP-3.17590660.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	17592358	SNP-3.17591139.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	./.	./.	./.	0/0	0/0	./.	1/1	./.	1/1	./.	./.	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	1/1	1/1	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	./.	./.	./.	0/0	0/0	1/1	./.	0/0	./.	0/0	./.	1/1	0/0	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	./.	1/1	1/1	0/0	./.	1/1	./.	1/1	1/1	./.	./.	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	17593386	SNP-3.17592167.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17593464	SNP-3.17592245.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	./.	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	17594845	SNP-3.17593626.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	./.	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17595808	SNP-3.17594589.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/1	./.	0/0	0/1	0/0	./.	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	1/1	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	1/1	1/1	./.	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	./.	0/1	0/1	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17596615	SNP-3.17595396.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	0/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	./.	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	0/1	./.	./.	0/1	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	./.	1/1	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	./.	0/0	0/0	./.	1/1	0/0	1/1	0/0	1/1	0/0	./.	./.	./.	0/1	./.	./.	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	./.	0/0	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	17598380	SNP-3.17597161.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.139-68T>C|194|LOC_Os03g30880|protein_coding|CODING|LOC_Os03g30880.1|1|1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	17598768	SNP-3.17597549.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/1	0/1	1/1	0/0	0/0	1/1	0/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	0/1	1/1	1/1	1/1	0/0	./.	1/1	0/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	17599074	SNP-3.17597855.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/1	0/0	1/1	1/1	0/1	1/1	./.	1/1	0/1	0/1	0/1	0/1	0/1	./.	0/0	./.	0/1	1/1	1/1	./.	0/1	./.	./.	./.	./.	./.	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	0/1	0/1	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	./.	1/1	0/1	0/1	0/0	./.	0/1	1/1	1/1	0/1	1/1	1/1	0/1	0/1	1/1	0/0	0/0	0/1	./.	0/1	0/1	./.	./.	./.	./.	1/1	./.	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/1	./.	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/1	1/1	./.	./.	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	17600387	SNP-3.17599168.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.-79-378A>G|856|LOC_Os03g30890|protein_coding|CODING|LOC_Os03g30890.1|1|1),intron_variant(MODIFIER|||c.-183-637A>G|735|LOC_Os03g30890|protein_coding|CODING|LOC_Os03g30890.2|1|1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17602120	SNP-3.17600901.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aAt/aGt|p.Asn426Ser/c.1277A>G|856|LOC_Os03g30890|protein_coding|CODING|LOC_Os03g30890.1|2|1),missense_variant(MODERATE|MISSENSE|aAt/aGt|p.Asn305Ser/c.914A>G|735|LOC_Os03g30890|protein_coding|CODING|LOC_Os03g30890.2|2|1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0
+3	17602951	SNP-3.17601732.	A	G	.	.	PR;EFF=synonymous_variant(LOW||cGa/cGa|p.Arg703Arg/c.2108A>G|856|LOC_Os03g30890|protein_coding|CODING|LOC_Os03g30890.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW||cGa/cGa|p.Arg582Arg/c.1745A>G|735|LOC_Os03g30890|protein_coding|CODING|LOC_Os03g30890.2|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17603083	SNP-3.17601864.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aGt/aAt|p.Ser747Asn/c.2240C>A|856|LOC_Os03g30890|protein_coding|CODING|LOC_Os03g30890.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME),missense_variant(MODERATE|MISSENSE|aGt/aAt|p.Ser626Asn/c.1877C>A|735|LOC_Os03g30890|protein_coding|CODING|LOC_Os03g30890.2|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17605753	SNP-3.17604534.	A	G	.	.	PR;EFF=synonymous_variant(LOW||tGt/tGt|p.Cys161Cys/c.482A>G|774|LOC_Os03g30910|protein_coding|CODING|LOC_Os03g30910.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17606218	SNP-3.17604999.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.892+55C>A|774|LOC_Os03g30910|protein_coding|CODING|LOC_Os03g30910.1|1|1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17606459	SNP-3.17605240.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Tgt/Agt|p.Cys345Ser/c.1033C>A|774|LOC_Os03g30910|protein_coding|CODING|LOC_Os03g30910.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17607362	SNP-3.17606143.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Caa/Aaa|p.Gln646Lys/c.1936C>A|774|LOC_Os03g30910|protein_coding|CODING|LOC_Os03g30910.1|2|1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17607398	SNP-3.17606179.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Tgc/Agc|p.Cys658Ser/c.1972C>A|774|LOC_Os03g30910|protein_coding|CODING|LOC_Os03g30910.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17607425	SNP-3.17606206.	C	A	.	.	PR;EFF=synonymous_variant(LOW||Aag/Aag|p.Lys667Lys/c.1999C>A|774|LOC_Os03g30910|protein_coding|CODING|LOC_Os03g30910.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17610485	SNP-3.17609266.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17610961	SNP-3.17609742.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	./.	./.	0/1	0/1	0/1	0/1	1/1	1/1	1/1	./.	1/1	0/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	1/1	./.	./.	0/1	1/1	1/1	0/0	0/1	1/1	0/0	1/1	./.	1/1	1/1	0/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17611345	SNP-3.17610126.	A	G	.	.	PR;EFF=5_prime_UTR_variant(MODIFIER||1421|c.-348A>G|250|LOC_Os03g30920|protein_coding|CODING|LOC_Os03g30920.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	./.	./.	0/0	./.	0/0	./.	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1
+3	17613346	SNP-3.17612127.	C	A	.	.	PR;EFF=synonymous_variant(LOW||cAg/cAg|p.Gln194Gln/c.581C>A|250|LOC_Os03g30920|protein_coding|CODING|LOC_Os03g30920.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17614049	SNP-3.17612830.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	1/1	./.	0/1	0/0	0/0	0/1	0/1	1/1	0/1	0/1	0/1	1/1	0/0	0/0	1/1	0/1	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	./.	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	0/0	1/1	1/1	0/0	0/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	0/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0
+3	17615482	SNP-3.17614263.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	./.	0/0	1/1	0/0	0/1	0/0	./.	1/1	./.	./.	./.	0/1	./.	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	1/1	0/0	1/1	0/1	1/1	1/1	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/1	1/1	./.	1/1	0/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	./.	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0
+3	17616753	SNP-3.17615534.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.514-15T>C|229|LOC_Os03g30934|protein_coding|CODING|LOC_Os03g30934.1|6|1),intron_variant(MODIFIER|||c.514-15T>C|229|LOC_Os03g30934|protein_coding|CODING|LOC_Os03g30934.2|5|1),intron_variant(MODIFIER|||c.*3-15T>C|173|LOC_Os03g30934|protein_coding|CODING|LOC_Os03g30934.3|6|1),intron_variant(MODIFIER|||c.514-15T>C|229|LOC_Os03g30934|protein_coding|CODING|LOC_Os03g30934.4|6|1),intron_variant(MODIFIER|||c.514-15T>C|229|LOC_Os03g30934|protein_coding|CODING|LOC_Os03g30934.5|5|1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	17621240	SNP-3.17620021.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.-389-574T>C|229|LOC_Os03g30934|protein_coding|CODING|LOC_Os03g30934.1|1|1),intron_variant(MODIFIER|||c.-389-574T>C|173|LOC_Os03g30934|protein_coding|CODING|LOC_Os03g30934.3|1|1),intron_variant(MODIFIER|||c.-358-574T>C|229|LOC_Os03g30934|protein_coding|CODING|LOC_Os03g30934.4|1|1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	0/0	0/0	./.	./.	1/1	./.	./.	1/1	./.	0/0	1/1	1/1	./.	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1
+3	17621876	SNP-3.17620657.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.-390+157G>T|229|LOC_Os03g30934|protein_coding|CODING|LOC_Os03g30934.1|1|1),intron_variant(MODIFIER|||c.-390+157G>T|173|LOC_Os03g30934|protein_coding|CODING|LOC_Os03g30934.3|1|1),intron_variant(MODIFIER|||c.-359+157G>T|229|LOC_Os03g30934|protein_coding|CODING|LOC_Os03g30934.4|1|1)	GT	./.	1/1	1/1	1/1	0/0	./.	./.	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	./.	0/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	./.	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	./.	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/1	0/1	./.	./.	0/0	0/0	0/1	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/1	0/0	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	17621997	SNP-3.17620778.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.-390+36G>T|229|LOC_Os03g30934|protein_coding|CODING|LOC_Os03g30934.1|1|1),intron_variant(MODIFIER|||c.-390+36G>T|173|LOC_Os03g30934|protein_coding|CODING|LOC_Os03g30934.3|1|1),intron_variant(MODIFIER|||c.-359+36G>T|229|LOC_Os03g30934|protein_coding|CODING|LOC_Os03g30934.4|1|1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	./.	1/1	1/1	0/0	0/0	./.	./.	0/0	./.	0/0	1/1	0/0	1/1	./.	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	./.	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	1/1	0/0	0/0
+3	17623026	SNP-3.17621807.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	1/1	0/1	0/1	./.	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	1/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	./.	0/0	0/0	1/1	0/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	./.	0/0	./.	0/0	0/1	0/0	./.	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/1	0/0	0/0	0/0	1/1	0/1	./.	./.	0/0	./.	./.	1/1	./.	./.	0/1	0/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	./.	0/1	0/0
+3	17623785	SNP-3.17622566.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|gcC/gcT|p.Ala403Ala/c.1209G>T|418|LOC_Os03g30950|protein_coding|CODING|LOC_Os03g30950.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	./.	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	1/1	./.	./.	./.	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	1/1	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	./.	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	./.	./.	1/1	1/1	0/0	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	./.	./.	0/0	0/0	0/0	./.	./.	./.	1/1	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	./.	./.	./.	0/0	0/0	./.	1/1	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	1/1	1/1	./.	1/1	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	./.	1/1	0/0
+3	17625611	SNP-3.17624392.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0
+3	17626123	SNP-3.17624904.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	1/1	0/0	./.	./.	0/0	1/1	0/0	1/1	./.	0/0	./.	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	1/1	./.	1/1	0/0	./.	1/1	./.	./.	./.	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	./.	./.	./.	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	./.	./.	1/1	1/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	./.	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	./.	0/0	0/0	./.	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0
+3	17627375	SNP-3.17626156.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	0/0	1/1	0/0	1/1	./.	0/0	./.	./.	./.	./.	0/0	./.	1/1	1/1	1/1	./.	./.	./.	./.	1/1	1/1	0/0	0/0	./.	1/1	0/0	./.	0/0	./.	0/0	0/0	./.	1/1	1/1	0/0	1/1	./.	0/0	1/1	1/1	./.	1/1	1/1	./.	./.	./.	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0
+3	17634856	SNP-3.17633637.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0
+3	17634974	SNP-3.17633755.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	1/1	1/1	./.	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17635011	SNP-3.17633792.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/1	0/0	0/1	./.	./.	./.	0/0	0/0	./.	0/0	./.	./.	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	./.	./.	./.	0/0	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	0/0	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/1	./.	./.	0/0	./.	0/0	./.	0/0	0/0	./.	1/1	0/0	1/1	0/0	./.	./.	0/1	0/1	0/0	1/1	./.	0/1	1/1	0/0	./.	1/1	./.	0/0	0/0	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	0/0	1/1
+3	17636302	SNP-3.17635083.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	0/0	0/0	0/0	./.	1/1	0/0	./.	./.	0/0	0/0	./.	1/1	./.	./.	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	./.	1/1	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0
+3	17639132	SNP-3.17637913.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/1	0/0	1/1	0/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17639226	SNP-3.17638007.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/0	./.	0/1	1/1	1/1	0/1	0/1	./.	0/0	0/0	0/0	1/1	./.	0/1	0/0	0/1	1/1	./.	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/1	./.	0/0	./.	0/0	0/0	0/1	0/0	0/0	./.	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	./.	1/1	1/1	0/0	0/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/1	./.	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	./.	0/0	0/0	1/1	0/0
+3	17642147	SNP-3.17640928.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0
+3	17643112	SNP-3.17641893.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	1/1	1/1	0/1	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/1	0/0	1/1	1/1	0/1	./.	./.	./.	./.	0/0	0/0	0/0	0/0	./.	./.	0/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0
+3	17643875	SNP-3.17642656.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	0/1	0/1	0/0	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	./.	0/0	0/1	1/1	0/0
+3	17644445	SNP-3.17643226.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.57+364A>G|628|LOC_Os03g30980|protein_coding|CODING|LOC_Os03g30980.1|1|1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	17644856	SNP-3.17643637.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.58-126C>A|628|LOC_Os03g30980|protein_coding|CODING|LOC_Os03g30980.1|1|1)	GT	./.	1/1	1/1	1/1	0/0	0/0	./.	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/1	0/0	0/0	1/1	./.	0/0	1/1	0/0	./.	0/0	./.	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/1	0/0	./.	0/0	0/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	./.	0/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/1	1/1	0/0	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	./.	0/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	0/1	0/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	0/0	0/0	0/0	0/0	./.	0/0
+3	17647013	SNP-3.17645794.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ggC/ggA|p.Gly439Gly/c.1317C>A|628|LOC_Os03g30980|protein_coding|CODING|LOC_Os03g30980.1|5|1)	GT	0/0	1/1	1/1	0/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/1	0/0	0/0	0/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	0/1	./.	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/1	0/0	0/1	1/1	./.	1/1	1/1	./.	1/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0
+3	17650140	SNP-3.17648921.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|gcA/gcT|p.Ala1085Ala/c.3255G>T|1547|LOC_Os03g30990|protein_coding|CODING|LOC_Os03g30990.1|7|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	1/1	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	./.	0/0	1/1	0/0	./.	./.	./.	1/1	./.	./.	1/1	./.	./.	1/1	1/1	./.	1/1	./.	./.	./.	./.	1/1	./.	./.	0/0	./.	0/0	./.	0/0	./.	./.	1/1	./.	./.	./.	0/0	1/1	./.	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17662282	SNP-3.17661063.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ccG/ccA|p.Pro147Pro/c.441C>A|692|LOC_Os03g31000|protein_coding|CODING|LOC_Os03g31000.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0
+3	17664128	SNP-3.17662909.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.765+1161A>G|692|LOC_Os03g31000|protein_coding|CODING|LOC_Os03g31000.1|8|1)	GT	0/1	0/0	0/0	0/0	0/1	1/1	0/1	0/0	0/0	0/1	0/1	1/1	0/1	./.	0/1	0/0	0/1	./.	1/1	1/1	1/1	./.	./.	0/0	./.	0/1	0/1	0/1	1/1	1/1	0/1	0/1	1/1	0/1	0/1	0/0	0/0	1/1	1/1	0/0	0/1	./.	0/1	0/1	1/1	1/1	0/0	0/0	0/1	0/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	0/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/1	0/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/1	./.	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/0	0/1	0/1	./.	0/1	./.	1/1	0/0	0/1	0/0	1/1	1/1	0/1	1/1	./.	0/1	0/1	1/1	0/1	0/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/1	0/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/1	./.	0/1	0/0	1/1
+3	17667100	SNP-3.17665881.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|ttT/ttA|p.Phe601Leu/c.1803C>A|692|LOC_Os03g31000|protein_coding|CODING|LOC_Os03g31000.1|11|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	./.	0/0	0/1	0/0	./.	1/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	./.	0/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/1	./.	0/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0
+3	17667874	SNP-3.17666655.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	./.	./.	1/1	0/0	1/1	1/1	./.	./.	./.	0/1	./.	0/1	0/1	./.	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	0/0	0/1	1/1	./.	0/0	./.	0/0	./.	0/0	0/1	1/1	0/1	./.	0/0	./.	./.	0/0	./.	1/1	0/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	17670005	SNP-3.17668786.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.303+352A>G|525|LOC_Os03g31010|protein_coding|CODING|LOC_Os03g31010.1|2|1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	0/0	1/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17671978	SNP-3.17670759.	A	G	.	.	PR;EFF=synonymous_variant(LOW||Gct/Gct|p.Ala336Ala/c.1006A>G|525|LOC_Os03g31010|protein_coding|CODING|LOC_Os03g31010.1|7|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1
+3	17672027	SNP-3.17670808.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.1023+32A>G|525|LOC_Os03g31010|protein_coding|CODING|LOC_Os03g31010.1|7|1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	17675851	SNP-3.17674632.	A	G	.	.	PR;EFF=5_prime_UTR_premature_start_codon_gain_variant(LOW||||123|LOC_Os03g31026|protein_coding|CODING|LOC_Os03g31026.1|1|1),5_prime_UTR_premature_start_codon_gain_variant(LOW||||123|LOC_Os03g31026|protein_coding|CODING|LOC_Os03g31026.2|1|1),5_prime_UTR_variant(MODIFIER||847|c.-736A>G|123|LOC_Os03g31026|protein_coding|CODING|LOC_Os03g31026.1|1|1),5_prime_UTR_variant(MODIFIER||847|c.-736A>G|123|LOC_Os03g31026|protein_coding|CODING|LOC_Os03g31026.2|1|1)	GT	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	./.	1/1	./.	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	./.	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	./.	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	./.	./.	0/0	./.	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.
+3	17676214	SNP-3.17674995.	C	A	.	.	PR;EFF=5_prime_UTR_variant(MODIFIER||484|c.-484C>A|123|LOC_Os03g31026|protein_coding|CODING|LOC_Os03g31026.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME),5_prime_UTR_variant(MODIFIER||484|c.-484C>A|123|LOC_Os03g31026|protein_coding|CODING|LOC_Os03g31026.2|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/1	1/1	0/0	1/1	0/1	0/0	0/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17676653	SNP-3.17675434.	A	G	.	.	PR;EFF=5_prime_UTR_variant(MODIFIER||45|c.-45A>G|123|LOC_Os03g31026|protein_coding|CODING|LOC_Os03g31026.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME),5_prime_UTR_variant(MODIFIER||45|c.-45A>G|123|LOC_Os03g31026|protein_coding|CODING|LOC_Os03g31026.2|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	0/1	1/1	0/1	0/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	1/1	0/0	./.	1/1	1/1	1/1	0/1	1/1	./.	./.	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	./.	0/0	1/1	1/1	./.	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	./.	1/1	0/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	0/0	1/1
+3	17678550	SNP-3.17677331.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/1	1/1	./.	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	17678991	SNP-3.17677772.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17683160	SNP-3.17681941.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cAt/cCt|p.His351Pro/c.1052T>C|616|LOC_Os03g31044|protein_coding|CODING|LOC_Os03g31044.2|10|1|WARNING_REF_DOES_NOT_MATCH_GENOME),5_prime_UTR_variant(MODIFIER||526|c.-526T>C|167|LOC_Os03g31044|protein_coding|CODING|LOC_Os03g31044.1|8|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	17683326	SNP-3.17682107.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.-676-16T>C|167|LOC_Os03g31044|protein_coding|CODING|LOC_Os03g31044.1|7|1),intron_variant(MODIFIER|||c.902-16T>C|616|LOC_Os03g31044|protein_coding|CODING|LOC_Os03g31044.2|9|1)	GT	1/1	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	17687960	SNP-3.17686741.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.-1796-52T>C|167|LOC_Os03g31044|protein_coding|CODING|LOC_Os03g31044.1|1|1),intron_variant(MODIFIER|||c.49-52T>C|616|LOC_Os03g31044|protein_coding|CODING|LOC_Os03g31044.2|1|1)	GT	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	./.	0/0	0/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	./.	./.	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	0/0	./.	1/1	1/1	./.	0/0	1/1	1/1	0/1	./.	./.	0/1	0/1	1/1	0/0	0/1	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/1	1/1	0/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	./.	./.	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	./.	1/1	0/1	1/1	./.	0/0	0/1	./.	1/1	0/0	1/1	0/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	./.	0/0	0/0	./.	0/0	./.	./.	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1
+3	17688883	SNP-3.17687664.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1	0/0	./.	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17689826	SNP-3.17688607.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/1	0/0	0/0	1/1	1/1	./.	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	./.	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	./.	./.	./.	./.	./.	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0
+3	17691873	SNP-3.17690654.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	./.	./.	./.	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/1	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	./.	./.	./.	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	./.	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	1/1	./.	1/1	0/0	0/0	./.	0/1	0/0	1/1	0/1	0/0	0/0	./.	./.	0/0	./.	1/1	./.	0/0	0/0	0/0	./.	0/1	1/1	./.	0/1	./.	0/0	1/1	0/1	0/0	0/0	0/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	./.	0/0	./.	./.	0/0
+3	17692504	SNP-3.17691285.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	0/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/1	0/0	./.	0/0	1/1	0/1	0/1	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17695096	SNP-3.17693877.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	./.	./.	./.	0/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	./.	1/1	0/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	./.	0/1	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0
+3	17697028	SNP-3.17695809.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ggT/ggA|p.Gly61Gly/c.183C>A|618|LOC_Os03g31060|protein_coding|CODING|LOC_Os03g31060.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	0/1	0/1	./.	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0
+3	17697157	SNP-3.17695938.	C	A	.	.	PR;EFF=synonymous_variant(LOW||ccA/ccA|p.Pro104Pro/c.312C>A|618|LOC_Os03g31060|protein_coding|CODING|LOC_Os03g31060.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	./.	1/1	0/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17697224	SNP-3.17696005.	A	G	.	.	PR;EFF=synonymous_variant(LOW||Ggg/Ggg|p.Gly127Gly/c.379A>G|618|LOC_Os03g31060|protein_coding|CODING|LOC_Os03g31060.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0	1/1	1/1	1/1	./.	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/0	1/1	0/1	0/0	0/1	1/1	0/0	0/0	0/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/1	0/0	1/1
+3	17697781	SNP-3.17696562.	A	G	.	.	PR;EFF=synonymous_variant(LOW||ctG/ctG|p.Leu215Leu/c.645A>G|618|LOC_Os03g31060|protein_coding|CODING|LOC_Os03g31060.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	./.	./.	1/1	./.	1/1	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	./.	0/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1
+3	17697883	SNP-3.17696664.	C	A	.	.	PR;EFF=synonymous_variant(LOW||ttA/ttA|p.Leu249Leu/c.747C>A|618|LOC_Os03g31060|protein_coding|CODING|LOC_Os03g31060.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17698451	SNP-3.17697232.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|atC/atA|p.Ile316Ile/c.948C>A|618|LOC_Os03g31060|protein_coding|CODING|LOC_Os03g31060.1|6|1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17698502	SNP-3.17697283.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|ttT/ttA|p.Phe333Leu/c.999C>A|618|LOC_Os03g31060|protein_coding|CODING|LOC_Os03g31060.1|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17698841	SNP-3.17697622.	C	A	.	.	PR;EFF=stop_gained(HIGH|NONSENSE|taT/taA|p.Tyr446*/c.1338C>A|618|LOC_Os03g31060|protein_coding|CODING|LOC_Os03g31060.1|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME);LOF=(LOC_Os03g31060|LOC_Os03g31060|1|1.00);NMD=(LOC_Os03g31060|LOC_Os03g31060|1|1.00)	GT	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/1	0/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/1	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17698925	SNP-3.17697706.	C	A	.	.	PR;EFF=synonymous_variant(LOW||gcA/gcA|p.Ala474Ala/c.1422C>A|618|LOC_Os03g31060|protein_coding|CODING|LOC_Os03g31060.1|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/1	0/0	1/1	0/1	1/1	1/1	0/1	1/1	0/0	1/1	0/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0
+3	17699075	SNP-3.17697856.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ctG/ctA|p.Leu524Leu/c.1572C>A|618|LOC_Os03g31060|protein_coding|CODING|LOC_Os03g31060.1|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17700323	SNP-3.17699104.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17700524	SNP-3.17699305.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17702270	SNP-3.17701051.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	0/0	1/1	./.	./.	0/0	./.	0/0	1/1	./.	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	./.	./.	1/1	1/1	0/0	1/1	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17702415	SNP-3.17701196.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	./.	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.
+3	17710758	SNP-3.17709539.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	./.	1/1	0/0	1/1	./.	1/1	1/1	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	./.	./.	./.	1/1	./.	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	1/1	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	./.	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0
+3	17710982	SNP-3.17709763.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17713163	SNP-3.17711944.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	./.	1/1	0/0	1/1
+3	17714585	SNP-3.17713366.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0
+3	17714710	SNP-3.17713491.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17716008	SNP-3.17714789.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.181+59A>G|146|LOC_Os03g31090|protein_coding|CODING|LOC_Os03g31090.1|2|1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/1	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/0	1/1
+3	17717694	SNP-3.17716475.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17717750	SNP-3.17716531.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/1	0/1	0/0	0/0	0/0	./.	1/1	0/0	0/1	0/0	0/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	1/1	./.	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0
+3	17718986	SNP-3.17717767.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	17721273	SNP-3.17720054.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aGt/aTt|p.Ser180Ile/c.539G>T|417|LOC_Os03g31110|protein_coding|CODING|LOC_Os03g31110.1|2|1),missense_variant(MODERATE|MISSENSE|aGt/aTt|p.Ser180Ile/c.539G>T|417|LOC_Os03g31110|protein_coding|CODING|LOC_Os03g31110.2|2|1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17721786	SNP-3.17720567.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|tCc/tTc|p.Ser9Phe/c.26G>T|417|LOC_Os03g31110|protein_coding|CODING|LOC_Os03g31110.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME),missense_variant(MODERATE|MISSENSE|tCc/tTc|p.Ser9Phe/c.26G>T|417|LOC_Os03g31110|protein_coding|CODING|LOC_Os03g31110.2|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	17723480	SNP-3.17722261.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ggG/ggT|p.Gly178Gly/c.534G>T|202|LOC_Os03g31120|protein_coding|CODING|LOC_Os03g31120.1|3|1)	GT	0/0	1/1	1/1	1/1	0/0	./.	0/1	1/1	1/1	0/0	0/1	0/0	0/1	0/0	0/0	1/1	0/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	./.	0/1	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/1	./.	0/1	./.	0/1	./.	./.	0/1	0/0	0/1	1/1	0/1	1/1	1/1	0/0	./.	0/1	0/0	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	./.	1/1	0/0
+3	17723948	SNP-3.17722729.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.397-22G>T|202|LOC_Os03g31120|protein_coding|CODING|LOC_Os03g31120.1|1|1)	GT	0/0	1/1	./.	1/1	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17725427	SNP-3.17724208.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17725668	SNP-3.17724449.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17729295	SNP-3.17728076.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.427-50C>A|1518|LOC_Os03g31134|protein_coding|CODING|LOC_Os03g31134.1|4|1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	./.	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/1	0/1	0/1	0/1	0/0	0/1	1/1	1/1	./.	0/1	./.	./.	./.	0/1	1/1	1/1	./.	1/1	1/1	0/1	0/1	1/1	./.	0/0	1/1	1/1	0/1	0/0	1/1	0/0	1/1	0/0	./.	./.	1/1	0/1	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	./.	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17729801	SNP-3.17728582.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.521+362C>A|1518|LOC_Os03g31134|protein_coding|CODING|LOC_Os03g31134.1|5|1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17737118	SNP-3.17735899.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17737696	SNP-3.17736477.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	1/1	./.	./.	1/1	./.	0/0	1/1	./.	./.	./.	./.	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	./.	./.	./.	./.	0/0	./.	./.	1/1	0/0	./.	./.	./.	0/0	./.	./.	1/1	./.	0/0	./.	1/1	0/0	1/1	1/1	1/1	./.	1/1	./.	./.	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	./.	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	./.	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0
+3	17739317	SNP-3.17738098.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|gtG/gtA|p.Val373Val/c.1119C>A|640|LOC_Os03g31150|protein_coding|CODING|LOC_Os03g31150.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW|SILENT|gtG/gtA|p.Val373Val/c.1119C>A|640|LOC_Os03g31150|protein_coding|CODING|LOC_Os03g31150.2|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW|SILENT|gtG/gtA|p.Val373Val/c.1119C>A|640|LOC_Os03g31150|protein_coding|CODING|LOC_Os03g31150.3|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0
+3	17740471	SNP-3.17739252.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.1852-133C>A|640|LOC_Os03g31150|protein_coding|CODING|LOC_Os03g31150.1|2|1),intron_variant(MODIFIER|||c.1852-133C>A|640|LOC_Os03g31150|protein_coding|CODING|LOC_Os03g31150.2|2|1),intron_variant(MODIFIER|||c.1852-133C>A|640|LOC_Os03g31150|protein_coding|CODING|LOC_Os03g31150.3|2|1)	GT	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	0/1	0/0	./.	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/1	0/0	0/0	./.	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/1	0/0	0/0	1/1	0/1	1/1	0/0	0/0	./.	0/0	./.	0/0	0/1	0/0	0/0	./.	0/0	0/1	0/0	1/1	./.	1/1	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/1	0/0	1/1	0/0
+3	17741343	SNP-3.17740124.	A	G	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||668|c.*668A>G|640|LOC_Os03g31150|protein_coding|CODING|LOC_Os03g31150.1|3|1),3_prime_UTR_variant(MODIFIER||668|c.*421A>G|640|LOC_Os03g31150|protein_coding|CODING|LOC_Os03g31150.3|4|1),3_prime_UTR_variant(MODIFIER||668|c.*229A>G|640|LOC_Os03g31150|protein_coding|CODING|LOC_Os03g31150.2|4|1)	GT	./.	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/1	0/1	./.	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17743311	SNP-3.17742092ga.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.*296-407A>G|122|LOC_Os03g31160|protein_coding|CODING|LOC_Os03g31160.1|2|1)	GT	./.	0/0	0/0	0/0	1/1	./.	0/1	0/0	0/0	./.	0/0	0/1	1/1	1/1	1/1	0/1	./.	0/1	1/1	1/1	0/0	./.	./.	./.	./.	0/1	./.	1/1	1/1	./.	0/1	./.	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	0/0	0/1	1/1	0/0	./.	1/1	1/1	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	./.	1/1	0/1	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	17743358	SNP-3.17742139.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.*296-360A>G|122|LOC_Os03g31160|protein_coding|CODING|LOC_Os03g31160.1|2|1)	GT	./.	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	1/1	./.	./.	1/1	./.	./.	0/0	./.	./.	1/1	./.	0/0	0/0	./.	0/0	./.	./.	0/0	1/1	./.	0/0	./.	1/1	1/1	./.	./.	./.	./.	./.	1/1	1/1	./.	1/1	1/1	0/0	./.	0/0	./.	./.	1/1	1/1	1/1	0/0	./.	./.	1/1	1/1	1/1	0/0	./.	./.	./.	./.	./.	1/1	1/1	./.	./.	./.	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	./.	1/1	0/0	./.	0/0	0/0	./.	1/1	./.	./.	./.	1/1	./.	0/0	./.	./.	./.	./.	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	./.	1/1	./.	./.	1/1	./.	1/1	0/0	./.	./.	./.	1/1	./.	1/1	1/1	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0	./.	./.	./.	./.	./.	0/0	1/1	0/0	./.	./.	./.	./.	1/1	0/0	0/0	./.	./.	./.	1/1	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	./.	1/1	1/1	0/0	./.	./.
+3	17744426	SNP-3.17743207.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	./.	./.	./.	0/0	0/0	./.	./.	0/0	./.	1/1	0/0	0/0	0/0	./.	1/1	./.	0/0	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	./.	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0
+3	17746158	SNP-3.17744939.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.857+130G>T|322|LOC_Os03g31170|protein_coding|CODING|LOC_Os03g31170.1|8|1),intron_variant(MODIFIER|||c.*225+130G>T|258|LOC_Os03g31170|protein_coding|CODING|LOC_Os03g31170.3|7|1),intron_variant(MODIFIER|||c.722-401G>T|244|LOC_Os03g31170|protein_coding|CODING|LOC_Os03g31170.2|7|1)	GT	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/1	1/1	0/1	1/1	0/0	1/1	1/1	0/0	0/1	./.	0/0	0/0	0/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	0/0	./.	1/1	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/1	./.	0/0	0/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	17749213	SNP-3.17747994.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0
+3	17749696	SNP-3.17748477.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17749998	SNP-3.17748779.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	./.	./.	0/0	./.	1/1	1/1	0/0	0/0	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	./.	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	./.	./.	./.	./.	1/1	./.	./.	1/1	1/1	./.	./.	./.	./.	./.	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	./.	./.	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	1/1	./.	./.	./.	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1
+3	17750962	SNP-3.17749743.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0
+3	17752329	SNP-3.17751110.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	./.	1/1	1/1	./.	0/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/1	0/0	0/1	1/1	0/0	0/0	0/1	0/1	0/1	0/1	0/0	0/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	0/1	./.	0/0	0/1	0/1	0/1	0/1	0/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	17752493	SNP-3.17751274.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	./.	./.	0/1	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/1	0/1	0/0	./.	0/0	./.	0/1	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	0/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/1	./.	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	1/1	0/1	0/1	0/0	0/0	./.	0/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	./.	0/1	./.	./.	0/0	0/0	0/0	0/0	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	1/1	1/1	0/0	./.	0/1	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	./.	./.	0/0	./.	1/1	0/0
+3	17752871	SNP-3.17751652.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	17753299	SNP-3.17752080.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/1	0/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	17753741	SNP-3.17752522.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	0/0	0/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17755529	SNP-3.17754310.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.-57+596C>A|423|LOC_Os03g31180|protein_coding|CODING|LOC_Os03g31180.2|1|1),intron_variant(MODIFIER|||c.-49+596C>A|739|LOC_Os03g31180|protein_coding|CODING|LOC_Os03g31180.1|1|1)	GT	0/0	1/1	0/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17756804	SNP-3.17755585.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gTt/gAt|p.Val48Asp/c.143C>A|423|LOC_Os03g31180|protein_coding|CODING|LOC_Os03g31180.2|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME),missense_variant(MODERATE|MISSENSE|gTt/gAt|p.Val48Asp/c.143C>A|739|LOC_Os03g31180|protein_coding|CODING|LOC_Os03g31180.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	./.	./.	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/1	1/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17759634	SNP-3.17758415.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.1648-104C>A|739|LOC_Os03g31180|protein_coding|CODING|LOC_Os03g31180.1|4|1),intron_variant(MODIFIER|||c.*1096-104C>A|423|LOC_Os03g31180|protein_coding|CODING|LOC_Os03g31180.2|3|1),intron_variant(MODIFIER|||c.106-104C>A|225|LOC_Os03g31180|protein_coding|CODING|LOC_Os03g31180.3|3|1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17759705	SNP-3.17758486.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.1648-33C>A|739|LOC_Os03g31180|protein_coding|CODING|LOC_Os03g31180.1|4|1),intron_variant(MODIFIER|||c.*1096-33C>A|423|LOC_Os03g31180|protein_coding|CODING|LOC_Os03g31180.2|3|1),intron_variant(MODIFIER|||c.106-33C>A|225|LOC_Os03g31180|protein_coding|CODING|LOC_Os03g31180.3|3|1)	GT	0/0	1/1	0/1	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0
+3	17760048	SNP-3.17758829.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ccA/ccG|p.Pro621Pro/c.1863A>G|739|LOC_Os03g31180|protein_coding|CODING|LOC_Os03g31180.1|6|1),synonymous_variant(LOW|SILENT|ccA/ccG|p.Pro107Pro/c.321A>G|225|LOC_Os03g31180|protein_coding|CODING|LOC_Os03g31180.3|5|1),3_prime_UTR_variant(MODIFIER||2115|c.*1311A>G|423|LOC_Os03g31180|protein_coding|CODING|LOC_Os03g31180.2|5|1)	GT	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	1/1	./.	0/0	0/0	./.	./.	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	./.	./.	0/0	0/0	./.	1/1	0/0	0/0	./.	./.	1/1	./.	./.	1/1	./.	./.	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	./.	./.	./.	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/0
+3	17761017	SNP-3.17759798.	C	A	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||3084|c.*2087C>A|423|LOC_Os03g31180|protein_coding|CODING|LOC_Os03g31180.2|7|1),3_prime_UTR_variant(MODIFIER||419|c.*419C>A|739|LOC_Os03g31180|protein_coding|CODING|LOC_Os03g31180.1|8|1),3_prime_UTR_variant(MODIFIER||419|c.*419C>A|225|LOC_Os03g31180|protein_coding|CODING|LOC_Os03g31180.3|7|1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0
+3	17769310	SNP-3.17768091.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17772479	SNP-3.17771260.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	0/1	0/1	0/1	1/1	./.	0/0	0/1	0/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	./.	./.	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17772942	SNP-3.17771723.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	./.	./.	0/0	0/0	0/0	./.	./.	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1
+3	17776061	SNP-3.17774842.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|acT/acA|p.Thr430Thr/c.1290C>A|490|LOC_Os03g31210|protein_coding|CODING|LOC_Os03g31210.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	1/1	./.	./.	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	./.	./.	0/0	1/1	1/1	1/1	./.	0/0	1/1	./.	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17776178	SNP-3.17774959.	C	A	.	.	PR;EFF=synonymous_variant(LOW||ggA/ggA|p.Gly469Gly/c.1407C>A|490|LOC_Os03g31210|protein_coding|CODING|LOC_Os03g31210.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	0/1	./.	0/1	0/1	0/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/1	0/0	1/1	0/0	0/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17777038	SNP-3.17775819.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17777759	SNP-3.17776540.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	0/0	1/1	0/0	0/1	1/1	0/0	0/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	1/1	0/0	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0
+3	17781236	SNP-3.17780017.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.-6-416A>G|520|LOC_Os03g31230|protein_coding|CODING|LOC_Os03g31230.1|1|1),intron_variant(MODIFIER|||c.-6-416A>G|520|LOC_Os03g31230|protein_coding|CODING|LOC_Os03g31230.2|1|1)	GT	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	./.	./.	0/0	1/1	0/0	0/0	1/1	0/0	./.	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	0/0	./.	1/1	./.	0/0	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	0/0	./.	./.	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	./.	./.	0/0	./.	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	./.
+3	17787709	SNP-3.17786490.	A	G	.	.	PR;EFF=synonymous_variant(LOW||gCc/gCc|p.Ala401Ala/c.1202T>C|417|LOC_Os03g31240|protein_coding|CODING|LOC_Os03g31240.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/1	1/1	0/1	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	1/1	0/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	17788017	SNP-3.17786798.	A	G	.	.	PR;EFF=synonymous_variant(LOW||cgC/cgC|p.Arg298Arg/c.894T>C|417|LOC_Os03g31240|protein_coding|CODING|LOC_Os03g31240.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/1	0/1	./.	1/1	0/1	1/1	0/1	0/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	0/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	0/1	0/1	0/1	0/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	./.	./.	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/1	0/1	0/0	1/1
+3	17789783	SNP-3.17788564.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	0/0	./.	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	17790869	SNP-3.17789650.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	./.	0/0	0/0	./.	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/1	1/1	0/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	./.	1/1	./.	./.	1/1	1/1	0/0	0/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0
+3	17792735	SNP-3.17791516.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/1	0/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/1	1/1	./.	0/0	0/0	0/0	0/0	0/1	./.	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17794718	SNP-3.17793499.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0
+3	17795243	SNP-3.17794024.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	1/1	0/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1
+3	17795350	SNP-3.17794131.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/1	0/0	1/1	1/1	./.	0/0	0/0	./.	1/1	0/0	1/1	0/1	./.	1/1	0/1	./.	./.	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	1/1	./.	0/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0
+3	17796195	SNP-3.17794976.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0
+3	17797088	SNP-3.17795869.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17798652	SNP-3.17797433.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	./.	1/1	0/0	./.	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	./.	1/1	1/1	0/0	./.	1/1	0/0	0/0	1/1	./.	1/1	./.	./.	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	./.	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/0	1/1	./.	0/0	1/1	./.	./.	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	./.	./.	0/0	./.	0/0	./.	0/0
+3	17799588	SNP-3.17798369.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/1	0/0	./.	0/0	0/0	0/1	0/1	./.	0/1	0/1	0/1	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/1	1/1
+3	17802464	SNP-3.17801245.	A	G	.	.	PR;EFF=synonymous_variant(LOW||tCa/tCa|p.Ser91Ser/c.272T>C|100|LOC_Os03g31254|protein_coding|CODING|LOC_Os03g31254.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	17802533	SNP-3.17801314.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cGa/cTa|p.Arg68Leu/c.203G>T|100|LOC_Os03g31254|protein_coding|CODING|LOC_Os03g31254.1|1|1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17803332	SNP-3.17802113.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	1/1	./.	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	./.	./.	./.	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	./.	0/0	./.	1/1	0/0	1/1	./.	./.	0/0	1/1	1/1	1/1	./.	0/0	./.	1/1	0/0	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	1/1	0/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	./.	0/0
+3	17805262	SNP-3.17804043.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.318+40G>T|189|LOC_Os03g31260|protein_coding|CODING|LOC_Os03g31260.1|2|1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17806401	SNP-3.17805182.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/1	./.	./.	./.	0/0	1/1	./.	0/1	0/0	0/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	./.	1/1	./.	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0
+3	17806488	SNP-3.17805269.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	17806804	SNP-3.17805585.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17810344	SNP-3.17809125.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17811027	SNP-3.17809808.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/1	1/1	0/0	1/1	1/1	0/1	1/1	0/1	./.	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/1	1/1	./.	0/0	1/1	0/0	./.	0/0	1/1	./.	0/1	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	./.	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17811450	SNP-3.17810231.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	./.	0/0	0/0	0/0	0/1	1/1	0/0	0/1	0/0	0/1	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/1	0/1	./.	0/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	./.	1/1	0/0	./.	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1
+3	17811831	SNP-3.17810612.	A	G	.	.	PR;EFF=synonymous_variant(LOW||cCt/cCt|p.Pro72Pro/c.215T>C|150|LOC_Os03g31270|protein_coding|CODING|LOC_Os03g31270.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	17812437	SNP-3.17811218.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.38-222G>T|150|LOC_Os03g31270|protein_coding|CODING|LOC_Os03g31270.1|1|1)	GT	0/0	0/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17812885	SNP-3.17811666.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.37+287G>T|150|LOC_Os03g31270|protein_coding|CODING|LOC_Os03g31270.1|1|1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/1	0/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	./.	0/0	0/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17814827	SNP-3.17813608.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	1/1	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	0/0	1/1	./.	0/0	./.	1/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	./.	./.	1/1	0/0	1/1	0/0	./.	./.	./.	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	./.	0/0	./.	./.	./.	./.	0/0	./.	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0
+3	17815796	SNP-3.17814577.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/1	./.	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/1	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0
+3	17815870	SNP-3.17814651.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	./.	0/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/1	1/1	./.	0/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/1	1/1	./.	./.	./.	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/1	./.	0/1	./.	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	17816430	SNP-3.17815211.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	17817749	SNP-3.17816530.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	./.	0/0
+3	17818220	SNP-3.17817001.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	0/0	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	0/1	0/1	1/1	1/1	0/0	./.	0/0	0/1	0/0	1/1	0/1	0/0	0/0	0/0	1/1	./.	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	./.	0/0	./.	0/0	0/1	./.	1/1	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	./.	1/1	0/0	0/0	0/1	1/1	0/0
+3	17818324	SNP-3.17817105.	C	A	.	.	PR;EFF=stop_gained(HIGH|NONSENSE|Gag/Tag|p.Glu192*/c.574G>T|196|LOC_Os03g31280|protein_coding|CODING|LOC_Os03g31280.1|2|1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17822048	SNP-3.17820829.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	./.	0/1	1/1	0/0	1/1	1/1	./.	./.	0/1	./.	1/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17823232	SNP-3.17822013.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	./.	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	./.	0/0	1/1	0/0	./.	./.	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0
+3	17823757	SNP-3.17822538.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	./.	1/1	0/0	0/0	./.	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	./.	./.	./.	./.	1/1	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17824014	SNP-3.17822795.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/1	1/1	0/0	0/0	0/0	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/1	1/1	0/0	1/1	1/1	0/1	./.	0/1	0/1	0/1	0/0	0/1	1/1	1/1	./.	1/1	1/1	0/0	./.	0/1	./.	./.	1/1	1/1	1/1	0/0	0/1	0/0	1/1	0/0	0/1	1/1	0/1	0/0	0/0	0/1	./.	0/0	1/1	0/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	17825278	SNP-3.17824059.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.136+619C>A|120|LOC_Os03g31290|protein_coding|CODING|LOC_Os03g31290.1|2|1),intron_variant(MODIFIER|||c.136+619C>A|119|LOC_Os03g31290|protein_coding|CODING|LOC_Os03g31290.2|2|1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17828059	SNP-3.17826840.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/1	0/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	./.	0/1	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0
+3	17828261	SNP-3.17827042.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	1/1	1/1	0/1	./.	0/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	./.	./.	0/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	0/1	0/1	./.	0/1	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/1	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	1/1	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	1/1	0/1	./.	0/0	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	./.	./.	0/0	0/0	./.	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/1
+3	17831799	SNP-3.17830580.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17831851	SNP-3.17830632.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	1/1	1/1	1/1	./.	0/1	0/0	1/1	1/1	./.	0/0	0/0	./.	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	./.	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/1	1/1	0/0	0/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/1	0/1	./.	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/1	./.	./.	./.	0/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/1	0/0	0/1	1/1	0/0
+3	17834227	SNP-3.17833008.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.706+576C>A|978|LOC_Os03g31300|protein_coding|CODING|LOC_Os03g31300.1|4|1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/1	0/0	0/1	0/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17835071	SNP-3.17833852.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.903-25C>A|978|LOC_Os03g31300|protein_coding|CODING|LOC_Os03g31300.1|5|1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	./.	1/1	1/1	./.	./.	0/0	0/0	0/0	./.	./.	./.	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0
+3	17836160	SNP-3.17834941.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.1108+307C>A|978|LOC_Os03g31300|protein_coding|CODING|LOC_Os03g31300.1|7|1)	GT	0/0	0/0	./.	1/1	./.	0/0	0/1	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/1	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/1	1/1	0/0
+3	17842285	SNP-3.17841066.	C	A	.	.	PR;EFF=splice_region_variant(LOW|||c.875G>T|247|LOC_Os03g31310|protein_coding|CODING|LOC_Os03g31310.5|3|1),3_prime_UTR_variant(MODIFIER||651|c.*135G>T|247|LOC_Os03g31310|protein_coding|CODING|LOC_Os03g31310.3|3|1),intron_variant(MODIFIER|||c.*130+5G>T|247|LOC_Os03g31310|protein_coding|CODING|LOC_Os03g31310.5|3|1),intron_variant(MODIFIER|||c.*19+632G>T|247|LOC_Os03g31310|protein_coding|CODING|LOC_Os03g31310.1|2|1),intron_variant(MODIFIER|||c.*19+632G>T|247|LOC_Os03g31310|protein_coding|CODING|LOC_Os03g31310.2|2|1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17843926	SNP-3.17842707.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.-59+159T>C|247|LOC_Os03g31310|protein_coding|CODING|LOC_Os03g31310.2|1|1),intron_variant(MODIFIER|||c.-74+159T>C|247|LOC_Os03g31310|protein_coding|CODING|LOC_Os03g31310.1|1|1),intron_variant(MODIFIER|||c.-74+159T>C|247|LOC_Os03g31310|protein_coding|CODING|LOC_Os03g31310.3|1|1),intron_variant(MODIFIER|||c.-74+159T>C|247|LOC_Os03g31310|protein_coding|CODING|LOC_Os03g31310.4|1|1),intron_variant(MODIFIER|||c.-74+159T>C|247|LOC_Os03g31310|protein_coding|CODING|LOC_Os03g31310.5|1|1)	GT	./.	0/0	0/0	0/1	1/1	0/0	1/1	0/0	0/0	1/1	0/1	1/1	./.	1/1	0/1	0/0	1/1	1/1	1/1	0/1	0/1	./.	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	0/1	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/1	./.	1/1	0/1	1/1	0/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	./.	0/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	0/1	0/1	1/1	1/1	1/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/1	./.	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/1	0/0	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/1	0/1	1/1	1/1	0/1	0/0	0/0	./.	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1
+3	17845162	SNP-3.17843943.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	1/1	./.	0/0	./.	./.	1/1	./.	0/0	0/0	0/0	./.	0/0	./.	1/1	./.	0/0	./.	1/1	1/1	./.	1/1	./.	./.	0/0	0/0	./.	0/0	./.	./.	0/0	1/1	./.	1/1	./.	0/0	./.	0/0	0/0	0/0	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/0	./.	./.	0/0	1/1	0/0	./.	1/1	0/0	0/0	1/1	1/1	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	./.	./.	0/0	./.	0/0	./.	0/0	0/0	./.	./.	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0	./.	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	./.	1/1	./.	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	17845517	SNP-3.17844298.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/1	0/1	0/1	0/0	0/1	1/1	0/1	0/1	0/0	0/1	0/0	1/1	0/0	0/1	0/1	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/1	1/1	0/1	1/1	0/1	0/1	0/1	0/1	0/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/1	0/1	0/1	0/1	0/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/1	1/1	0/0	0/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/1	0/1	1/1	0/1	0/1	1/1	0/1	0/0	0/1	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1
+3	17846359	SNP-3.17845140.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	0/1	./.	1/1	0/1	1/1	0/0	0/0	1/1	0/1	0/0	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	./.	1/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/1	./.	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	./.	./.	./.	0/0	1/1	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/1	./.	1/1	0/0	./.	1/1	1/1	./.	1/1	./.	0/0	./.	0/0	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0
+3	17846743	SNP-3.17845524.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17846903	SNP-3.17845684.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/1	1/1	1/1	1/1	./.	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	17847862	SNP-3.17846643.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	./.	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0
+3	17848071	SNP-3.17846852.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0
+3	17850031	SNP-3.17848812.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	17850248	SNP-3.17849029.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17851173	SNP-3.17849954.	C	A	.	.	PR;EFF=synonymous_variant(LOW||tTg/tTg|p.Leu197Leu/c.590G>T|267|LOC_Os03g31320|protein_coding|CODING|LOC_Os03g31320.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW||tTg/tTg|p.Leu197Leu/c.590G>T|267|LOC_Os03g31320|protein_coding|CODING|LOC_Os03g31320.2|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	0/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17854397	SNP-3.17853178.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0
+3	17854705	SNP-3.17853486.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	17856249	SNP-3.17855030.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	1/1	./.	0/1	1/1	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	./.	./.	0/0	0/0	0/0	1/1	./.	1/1	./.	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	./.	./.	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/1	1/1	1/1	0/0	0/0
+3	17858169	SNP-3.17856950.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/1	0/1	./.	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17858214	SNP-3.17856995.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	./.	0/0	./.	./.	1/1	./.	./.	./.	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	./.	./.	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	./.	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	./.	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	./.	1/1	./.	0/0	1/1	./.	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	./.	0/0	./.	1/1	./.	0/0	1/1	0/0	./.	./.	0/0	1/1	0/0	./.	./.	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.
+3	17858548	SNP-3.17857329.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17859237	SNP-3.17858018.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Gca/Cca|p.Ala55Pro/c.163T>C|71|LOC_Os03g31340|protein_coding|CODING|LOC_Os03g31340.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	17859404	SNP-3.17858185.	C	A	.	.	PR;EFF=synonymous_variant(LOW||caT/caT|p.His26His/c.78G>T|71|LOC_Os03g31340|protein_coding|CODING|LOC_Os03g31340.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	./.	1/1	0/1	0/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	0/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/1	./.	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17859425	SNP-3.17858206.	C	A	.	.	PR;EFF=synonymous_variant(LOW||atT/atT|p.Ile19Ile/c.57G>T|71|LOC_Os03g31340|protein_coding|CODING|LOC_Os03g31340.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17861061	SNP-3.17859842.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17861116	SNP-3.17859897.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	./.	./.	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	./.	0/0	./.	./.	0/0	1/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	./.	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	./.	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	./.	./.	1/1	0/0	./.	./.	0/0	1/1	0/0	./.	0/0	1/1	./.	0/0	./.	1/1	1/1	./.	0/0	0/0	1/1	1/1	./.	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	1/1	0/0	./.
+3	17861866	SNP-3.17860647.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	17863220	SNP-3.17862001.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/1	0/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17864056	SNP-3.17862837.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	./.	./.	1/1	0/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/1	0/0	1/1	0/0
+3	17865173	SNP-3.17863954.	A	G	.	.	PR;EFF=synonymous_variant(LOW||tcG/tcG|p.Ser224Ser/c.672A>G|496|LOC_Os03g31360|protein_coding|CODING|LOC_Os03g31360.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	17865357	SNP-3.17864138.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Tcg/Acg|p.Ser286Thr/c.856C>A|496|LOC_Os03g31360|protein_coding|CODING|LOC_Os03g31360.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	17872703	SNP-3.17871484.	C	A	.	.	PR;EFF=synonymous_variant(LOW||gAt/gAt|p.Asp174Asp/c.521C>A|204|LOC_Os03g31370|protein_coding|CODING|LOC_Os03g31370.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	./.	./.	./.	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	1/1	0/1	0/0	0/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	./.	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	./.	0/0
+3	17874141	SNP-3.17872922.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	./.	1/1	1/1	0/1	1/1	1/1	0/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	17877248	SNP-3.17876029.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17878064	SNP-3.17876845.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0
+3	17878462	SNP-3.17877243.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	./.	1/1	0/0	./.	1/1	./.	./.	0/0	./.	./.	0/0	./.	1/1	./.	./.	./.	1/1	1/1	./.	./.	0/0	1/1	1/1	./.	./.	./.	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	1/1	./.	./.	0/0	1/1	0/0	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	./.	./.	./.	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	1/1	1/1	./.	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	./.	./.	./.	0/0	./.	./.	0/0	0/0	1/1	1/1	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	1/1	0/0	0/0	./.
+3	17878731	SNP-3.17877512.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	./.	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0
+3	17879535	SNP-3.17878316.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	0/1	1/1	1/1	1/1	./.	0/1	1/1	1/1	1/1	./.	1/1	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0
+3	17879666	SNP-3.17878447.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	1/1	1/1	./.	./.	./.	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	./.	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	./.	./.	1/1	1/1	0/0	./.	./.	1/1	./.	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	./.	1/1	0/0	./.	./.	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0
+3	17879911	SNP-3.17878692.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	./.	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	./.	1/1	./.	1/1	0/0	1/1	0/0	./.	0/1	1/1	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	./.	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	17879955	SNP-3.17878736.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/1	0/1	1/1	1/1	./.	1/1	0/1	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	./.	./.	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	1/1	./.	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	0/1	./.	0/0	0/0	0/0	1/1	1/1	./.	0/1	0/0	0/0	./.	0/0	0/1	0/0	0/0	1/1	./.	./.	1/1	1/1	0/1	0/1	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	0/0	./.	./.	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1
+3	17880337	SNP-3.17879118.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17881301	SNP-3.17880082.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17881763	SNP-3.17880544.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	17882403	SNP-3.17881184.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17882842	SNP-3.17881623.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17891933	SNP-3.17890714.	C	A	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||205|c.*205C>A|1036|LOC_Os03g31400|protein_coding|CODING|LOC_Os03g31400.1|16|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17896140	SNP-3.17894921.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	./.	1/1	./.	1/1	0/0	1/1	1/1	./.	0/1	1/1	./.	1/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	0/1	0/1	./.	0/1	0/0	./.	1/1	0/1	0/0	0/1	0/0	0/1	./.	1/1	0/1	./.	0/0	0/0	./.	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/1	0/0
+3	17896605	SNP-3.17895386.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/1	1/1	./.	./.	0/1	0/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	./.	0/0	./.	1/1	0/0	1/1	0/1	./.	1/1	1/1	0/1	0/0	./.	./.	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/1	1/1	./.	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/1	1/1	0/0	./.	1/1	./.	0/0	1/1	1/1	1/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	17899309	SNP-3.17898090.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	./.	0/0	1/1	0/0	1/1	0/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/1	0/0	0/0	0/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/1	0/1	0/0	./.	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	./.	0/0	0/0	0/0	1/1	0/1	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	./.	0/0
+3	17900103	SNP-3.17898884.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.1476-382T>C|611|LOC_Os03g31430|protein_coding|CODING|LOC_Os03g31430.1|8|1)	GT	1/1	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	1/1	0/0	./.	1/1	./.	./.	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	./.	./.	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	./.	1/1	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	./.	./.	./.	0/0	0/0	1/1	1/1	./.	1/1	./.	./.	./.	./.	./.	./.	./.	0/0	./.	0/0	./.	1/1	0/0	0/0	./.	0/0	1/1	1/1	./.	0/0	./.	./.	./.	0/0	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1
+3	17900223	SNP-3.17899004.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.1476-502T>C|611|LOC_Os03g31430|protein_coding|CODING|LOC_Os03g31430.1|8|1)	GT	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0
+3	17900413	SNP-3.17899194.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.1476-692G>T|611|LOC_Os03g31430|protein_coding|CODING|LOC_Os03g31430.1|8|1)	GT	0/1	1/1	./.	1/1	0/1	0/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/1	0/1	1/1	0/0	0/0	1/1	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	./.	0/0	1/1	0/1	0/1	0/0	0/0	0/0	./.	1/1	0/1	0/1	0/0	0/1	0/1	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/1	0/1	0/0	./.	0/0	0/0	0/1	./.	./.	0/0	0/0	0/0	0/0	0/1	0/1	./.	0/0	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/1	0/1	./.	0/0	1/1	0/0	0/0	0/0	0/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/1	0/1	0/0	0/1	0/1	0/0	0/0	0/1	1/1	1/1	0/0	0/1	0/0	0/1	0/1	0/0	0/0	0/0	./.	0/1	0/1	./.	1/1	0/1	0/1	0/1	0/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	./.	1/1	1/1	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	0/1	0/0	0/0	0/1	1/1	0/1
+3	17902941	SNP-3.17901722.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.1327-38G>T|611|LOC_Os03g31430|protein_coding|CODING|LOC_Os03g31430.1|6|1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17905010	SNP-3.17903791.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.170-67G>T|611|LOC_Os03g31430|protein_coding|CODING|LOC_Os03g31430.1|1|1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	0/1	0/1	0/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17905238	SNP-3.17904019.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.170-295G>T|611|LOC_Os03g31430|protein_coding|CODING|LOC_Os03g31430.1|1|1)	GT	./.	./.	0/0	1/1	./.	0/0	./.	0/0	1/1	0/0	./.	./.	0/0	./.	./.	1/1	./.	./.	0/0	0/0	./.	0/0	0/0	1/1	0/1	0/0	./.	0/0	0/1	./.	./.	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	./.	0/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/1	./.	0/0	0/0	./.	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	17906462	SNP-3.17905243.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/0	0/1	0/0	0/0	./.	0/0
+3	17906573	SNP-3.17905354.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	./.	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	0/0	1/1	1/1	./.	0/0	./.	./.	1/1	./.	./.	1/1	./.	./.	1/1	1/1	1/1	./.	./.	1/1	0/0	1/1	1/1	./.	0/0	1/1	0/0	./.	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	17907372	SNP-3.17906153.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	./.	0/0	0/0	./.	0/0	./.	./.	0/0	./.	./.	0/0	./.	1/1	./.	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	0/0	./.	./.	0/0	./.	./.	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	./.	1/1	0/0	./.	1/1	0/0	./.	./.	1/1	1/1	1/1	./.	1/1	./.	./.	1/1	0/0	./.	./.	./.	1/1	./.	./.	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	0/0	./.	./.	1/1	1/1	0/0	./.	./.	./.	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	./.	1/1	1/1	0/0	./.	1/1	1/1	0/0	./.	./.	./.	0/0	1/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	./.	1/1	0/0	./.	./.	0/0	./.	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	./.	./.	0/0	./.	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	1/1	0/0	0/0	./.	1/1	1/1	0/0	0/0	./.
+3	17908145	SNP-3.17906926.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/0	1/1	0/1	./.	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17909039	SNP-3.17907820.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/1	0/0	./.	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17909506	SNP-3.17908287.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/1	./.	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/1	0/1	0/0	0/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/1	./.	0/1	0/0	0/0	./.	0/1	1/1	0/0	./.	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/1	1/1	0/0
+3	17909598	SNP-3.17908379.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	./.	0/0	0/0	0/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/1	./.	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	0/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	./.	1/1	./.	./.	./.	./.	0/0	0/0	0/0	./.	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1
+3	17909991	SNP-3.17908772.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	1/1	0/1	0/0	0/0	0/0	0/1	0/0	1/1	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17910209	SNP-3.17908990.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	./.	0/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/1	./.	0/1	0/1	0/0	0/0	1/1	0/1	./.	./.	0/0	0/0	0/1	./.	0/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/1	0/0	./.	0/0	1/1	0/1	0/0	0/0	./.	0/1	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	0/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	./.	1/1	0/1	./.	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	1/1	./.	0/0	1/1	./.	0/0	./.	0/1	0/1	./.	./.	0/0	0/0	./.	0/0	./.	0/1	0/0	./.	./.	0/0	0/1	0/0	./.	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	./.	1/1	./.	1/1	0/0
+3	17910760	SNP-3.17909541.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	17911107	SNP-3.17909888.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	./.	0/1	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	17912986	SNP-3.17911767.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/1	0/0	0/1	0/0	0/1	0/1	0/0	0/1	./.	0/1	0/1	0/1	0/1	0/0	0/1	1/1	0/1	0/1	0/0	0/1	0/0	0/1	0/1	./.	0/1	0/1	0/1	0/1	0/1	0/1	0/1	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/1	0/1	0/1	0/1	1/1	1/1	0/0	1/1	0/1	1/1	0/0	0/0	./.	0/1	0/1	0/1	0/0	0/1	./.	0/1	0/1	0/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/1	1/1	0/0	0/1	0/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/1	0/1	0/0	1/1	0/1	0/1	1/1	0/0	0/1	0/0	0/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1
+3	17914329	SNP-3.17913110.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/1	0/1	1/1	0/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17914983	SNP-3.17913764.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ggA/ggC|p.Gly154Gly/c.462T>C|179|LOC_Os03g31440|protein_coding|CODING|LOC_Os03g31440.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/1	0/0	./.	1/1	./.	0/0	0/0	0/1	1/1	0/1	0/1	0/1	0/1	0/0	0/1	./.	./.	0/0	./.	0/1	1/1	0/0	0/1	0/0	0/1	0/0	0/1	0/1	0/1	0/1	0/0	0/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	0/1	0/1	0/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/1	0/1	1/1	0/1	0/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/1	0/0	1/1	0/1	./.	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	./.	./.	0/0	1/1	0/1	0/1	1/1	1/1	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1
+3	17918451	SNP-3.17917232.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/1	1/1	1/1	0/0	1/1	0/1	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	17920626	SNP-3.17919407.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	0/0	./.	1/1	0/1	0/0	./.	0/0	1/1	0/0	./.	1/1	./.	0/0	0/0	0/1	1/1	0/0	./.	1/1	./.	1/1	0/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17925657	SNP-3.17924438.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.44-413G>T|611|LOC_Os03g31446|protein_coding|CODING|LOC_Os03g31446.1|1|1)	GT	./.	1/1	./.	1/1	./.	0/0	1/1	1/1	1/1	./.	0/0	./.	0/0	0/0	./.	1/1	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	./.	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	1/1	0/0
+3	17926056	SNP-3.17924837.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.43+237G>T|611|LOC_Os03g31446|protein_coding|CODING|LOC_Os03g31446.1|1|1)	GT	./.	1/1	./.	1/1	0/0	0/0	./.	1/1	1/1	0/0	./.	./.	0/1	0/0	./.	1/1	./.	./.	0/0	./.	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	./.	0/0	./.	./.	1/1	0/0	0/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	17933050	SNP-3.17931831.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	./.	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	0/1	./.	1/1	./.	0/0	0/1	0/0	1/1	0/0	0/1	0/1	1/1	0/0	0/0	0/1	1/1	0/0	./.	1/1	0/0	1/1	1/1	0/1	./.	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0
+3	17934255	SNP-3.17933036.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17936247	SNP-3.17935028ag.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	./.	1/1	0/0	./.	0/0	1/1	0/1	./.	./.	0/1	0/0	0/0	1/1	0/1	0/0	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17936587	SNP-3.17935368.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	./.	./.	0/1	1/1	1/1	0/1	1/1	0/0	0/0	./.	./.	1/1	0/0	0/0	./.	./.	./.	./.	0/0	1/1	0/1	0/0	0/1	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	./.	./.	0/1	./.	./.	0/0	./.	0/0	0/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/1	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/1	1/1	./.	0/0	0/0	0/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	./.	./.	./.	1/1	0/0
+3	17936998	SNP-3.17935779.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/1	0/1	0/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	1/1	0/0	0/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	./.	0/0
+3	17937439	SNP-3.17936220.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/1	./.	0/1	1/1	0/0	0/0	0/0	./.	./.	0/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1
+3	17937570	SNP-3.17936351.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/1	0/0	./.	0/1	0/0	0/0	0/1	./.	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/1	0/0	./.	0/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0
+3	17937691	SNP-3.17936472.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	0/0	./.	./.	0/0	0/0	0/1	./.	0/0	./.	./.	0/0	./.	0/0	./.	0/1	0/0	./.	./.	0/0	0/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	0/1	1/1	1/1	1/1	1/1	0/1	./.	./.	./.	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/1	./.	./.	0/1	1/1	1/1	0/1	./.	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	./.	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17938830	SNP-3.17937611.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/1	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/1	0/1	./.	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	./.	0/1	0/0	0/0	./.	0/0	./.	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	./.	0/0	./.	./.	0/0	0/1	0/0	./.	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/1	0/0	1/1	0/0
+3	17939626	SNP-3.17938407.	A	G	.	.	PR;EFF=5_prime_UTR_premature_start_codon_gain_variant(LOW||||327|LOC_Os03g31490|protein_coding|CODING|LOC_Os03g31490.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),5_prime_UTR_variant(MODIFIER||55|c.-55A>G|327|LOC_Os03g31490|protein_coding|CODING|LOC_Os03g31490.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	0/0	1/1	./.	./.	1/1	./.	1/1	./.	./.	0/0	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	./.	./.	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	1/1	./.	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	1/1
+3	17940982	SNP-3.17939763.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.570+502A>G|327|LOC_Os03g31490|protein_coding|CODING|LOC_Os03g31490.1|2|1)	GT	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/1	./.	1/1	1/1	./.	0/0	./.	0/1	1/1	1/1	0/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	17944076	SNP-3.17942857.	C	A	.	.	PR;EFF=initiator_codon_variant(LOW|MISSENSE|Atg/Ttg|p.Met1?/c.1G>T|99|LOC_Os03g31500|protein_coding|CODING|LOC_Os03g31500.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	./.	./.	1/1	0/0	0/0	./.	./.	./.	./.	./.	1/1	0/0	1/1	1/1	1/1	./.	0/1	1/1	1/1	1/1	0/1	0/1	./.	./.	./.	1/1	0/0	1/1	./.	./.	0/0	0/1	1/1	./.	0/0	0/0	0/0	./.	1/1	1/1	0/0	./.	0/0	0/0	0/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	./.	0/0	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	1/1	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	./.	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	17944679	SNP-3.17943460.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	0/1	0/1	0/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/1	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	1/1	./.	0/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	0/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17945505	SNP-3.17944286.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/1	1/1	0/0	./.	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	./.	1/1	0/1	./.	./.	./.	./.	./.	0/0	./.	1/1	./.	0/1	./.	0/0	0/0	0/1	0/0	./.	0/1	./.	./.	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	./.	./.	0/0	./.	0/0	1/1	./.	1/1	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	./.	./.	1/1	./.	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	./.	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.
+3	17947981	SNP-3.17946762.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	0/0	1/1	./.	0/0	0/0	1/1	1/1	./.	1/1	./.	./.	0/0	0/1	1/1	0/0	./.	0/0	0/0	1/1	./.	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17948270	SNP-3.17947051.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	./.	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17948702	SNP-3.17947483.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17952951	SNP-3.17951732.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	17953359	SNP-3.17952140.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	./.	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1
+3	17954034	SNP-3.17952815.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/1	0/0	0/1	./.	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	17956417	SNP-3.17955198.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|gtC/gtT|p.Val464Val/c.1392G>T|511|LOC_Os03g31520|protein_coding|CODING|LOC_Os03g31520.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/1	0/0	./.	0/0	0/0	./.	0/0
+3	17958188	SNP-3.17956969.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	./.	0/0	./.	./.	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	./.	./.	0/0	./.	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	./.	./.	0/0	0/0	./.	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	./.	./.	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	1/1	1/1	./.
+3	17963359	SNP-3.17962140.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|aaC/aaT|p.Asn147Asn/c.441G>T|1177|LOC_Os03g31530|protein_coding|CODING|LOC_Os03g31530.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/1	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	1/1	1/1	1/1	0/1	0/1	1/1	0/0	1/1	1/1	0/1	0/0	0/1	0/0	1/1	./.	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/1	1/1	1/1	0/1	1/1	./.	1/1	0/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	./.	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	1/1	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	17964765	SNP-3.17963546.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	1/1	./.	0/1	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	./.	./.	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/1	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	./.	1/1	0/1	./.	./.	1/1	0/0	0/0	0/0	0/1	./.	./.	0/1	0/0	1/1	1/1	1/1	./.	./.	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	./.	./.	1/1
+3	17966864	SNP-3.17965645.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	17966914	SNP-3.17965695.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	1/1	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	./.	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	0/0	./.	1/1	1/1	0/0	./.	0/0	./.	0/0	./.	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0
+3	17967272	SNP-3.17966053.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/1	1/1	./.	1/1	0/1	0/1	1/1	1/1	0/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/1	1/1	1/1	1/1	1/1	0/1	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	./.	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1
+3	17970951	SNP-3.17969732.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	17971628	SNP-3.17970409.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/1	0/0	0/1	./.	1/1	0/0	0/0	0/1	./.	1/1	1/1	1/1	./.	0/0	./.	./.	./.	0/1	0/1	1/1	1/1	0/0	./.	0/1	0/1	0/1	./.	0/1	1/1	1/1	./.	1/1	./.	0/0	1/1	1/1	1/1	0/1	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	0/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/1	0/1	./.	./.	0/0	0/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/1	1/1	./.	./.	0/0	0/0	1/1	1/1	0/1	./.	0/0	./.	1/1	./.	./.	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1
+3	17972515	SNP-3.17971296.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aaT/aaA|p.Asn224Lys/c.672C>A|557|LOC_Os03g31542|protein_coding|CODING|LOC_Os03g31542.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	./.	./.	0/1	0/1	./.	0/0	./.	./.	1/1	0/0	./.	0/0	1/1	0/0	0/1	./.	0/1	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/1	./.	0/0	1/1	0/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	17972810	SNP-3.17971591.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Ctg/Atg|p.Leu280Met/c.838C>A|557|LOC_Os03g31542|protein_coding|CODING|LOC_Os03g31542.1|2|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/1	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/1	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	0/0	./.	1/1	0/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17973107	SNP-3.17971888.	C	A	.	.	PR;EFF=synonymous_variant(LOW||Ata/Ata|p.Ile379Ile/c.1135C>A|557|LOC_Os03g31542|protein_coding|CODING|LOC_Os03g31542.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	./.	./.	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	0/0	./.	./.	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17976158	SNP-3.17974939.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	./.	1/1	./.	0/0	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	./.	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	./.	1/1	0/0	./.
+3	17976415	SNP-3.17975196.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	1/1	0/0	./.	0/0	0/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	./.	0/0	0/1	1/1	0/0
+3	17977120	SNP-3.17975901.	A	G	.	.	PR;EFF=synonymous_variant(LOW||cGa/cGa|p.Arg89Arg/c.266A>G|107|LOC_Os03g31544|protein_coding|CODING|LOC_Os03g31544.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1
+3	17980378	SNP-3.17979159.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	0/1	0/0	./.	0/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	./.	./.	./.	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/1	0/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	./.	0/0	1/1	1/1	./.	0/0	0/0	./.	./.	./.	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	1/1	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	./.	./.	1/1	1/1	0/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	./.
+3	17982733	SNP-3.17981514.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	0/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	./.	0/1	0/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	./.	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	./.	0/0
+3	17982916	SNP-3.17981697.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	./.	./.	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	./.	0/0	0/0	1/1	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	1/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	1/1
+3	17982990	SNP-3.17981771.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/1	0/1	0/0	0/1	0/0	0/1	0/1	1/1	0/1	1/1	./.	0/1	0/1	./.	1/1	0/0	1/1	1/1	./.	0/0	0/1	0/0	1/1	0/0	0/1	1/1	0/1	0/0	0/0	0/1	./.	0/0	./.	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0
+3	17983222	SNP-3.17982003.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cTt/cAt|p.Leu22His/c.65C>A|223|LOC_Os03g31546|protein_coding|CODING|LOC_Os03g31546.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	./.	./.	0/1	0/1	./.	./.	1/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/1	0/0	./.	0/1	1/1	0/0	0/0	0/1	1/1	0/0	./.	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	17983505	SNP-3.17982286.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gaC/gaG|p.Asp116Glu/c.348A>G|223|LOC_Os03g31546|protein_coding|CODING|LOC_Os03g31546.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0
+3	17984594	SNP-3.17983375.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17984801	SNP-3.17983582.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/1	1/1	./.	0/0	./.	1/1	1/1	./.	./.	./.	./.	./.	0/0	1/1	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	./.	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	./.	0/1	0/0	./.	0/1	./.	0/0	0/0	0/0	0/1	0/0	1/1	1/1	./.	./.	0/0	0/0	1/1	./.	./.	./.	0/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	./.	0/1	0/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	17985314	SNP-3.17984095.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	17987234	SNP-3.17986015.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.-87+118A>G|1272|LOC_Os03g31550|protein_coding|CODING|LOC_Os03g31550.2|2|1),intron_variant(MODIFIER|||c.242+118A>G|1369|LOC_Os03g31550|protein_coding|CODING|LOC_Os03g31550.1|2|1)	GT	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	./.	0/0	1/1	0/0	./.	./.	./.	0/0	./.	./.	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	0/0	./.	1/1	1/1	0/0	./.	0/0	1/1	1/1	./.	1/1	./.	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	./.	./.	1/1	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	./.	0/0	0/0	1/1	1/1	0/0	0/0	./.	./.	0/0	./.	1/1	0/0	1/1	1/1	0/1	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1
+3	17992019	SNP-3.17990800.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.2413-588A>G|1369|LOC_Os03g31550|protein_coding|CODING|LOC_Os03g31550.1|6|1),intron_variant(MODIFIER|||c.2122-588A>G|1272|LOC_Os03g31550|protein_coding|CODING|LOC_Os03g31550.2|6|1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	17992271	SNP-3.17991052.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.2413-336A>G|1369|LOC_Os03g31550|protein_coding|CODING|LOC_Os03g31550.1|6|1),intron_variant(MODIFIER|||c.2122-336A>G|1272|LOC_Os03g31550|protein_coding|CODING|LOC_Os03g31550.2|6|1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1
+3	17993746	SNP-3.17992527.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|acT/acG|p.Thr1047Thr/c.3141A>G|1369|LOC_Os03g31550|protein_coding|CODING|LOC_Os03g31550.1|9|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW|SILENT|acT/acG|p.Thr950Thr/c.2850A>G|1272|LOC_Os03g31550|protein_coding|CODING|LOC_Os03g31550.2|9|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	17994360	SNP-3.17993141.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|acG/acA|p.Thr1069Thr/c.3207C>A|1369|LOC_Os03g31550|protein_coding|CODING|LOC_Os03g31550.1|10|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW|SILENT|acG/acA|p.Thr972Thr/c.2916C>A|1272|LOC_Os03g31550|protein_coding|CODING|LOC_Os03g31550.2|10|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/1	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/1	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0
+3	17998130	SNP-3.17996911.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|aaG/aaA|p.Lys1366Lys/c.4098C>A|1369|LOC_Os03g31550|protein_coding|CODING|LOC_Os03g31550.1|14|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW|SILENT|aaG/aaA|p.Lys1269Lys/c.3807C>A|1272|LOC_Os03g31550|protein_coding|CODING|LOC_Os03g31550.2|14|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18001028	SNP-3.17999809.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	1/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	0/1	0/0	1/1	0/0	0/1	0/1	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/1	0/1	0/0	1/1	0/1	0/1	1/1	0/1	1/1	0/1	1/1	1/1	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/1	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/1	0/1	0/1	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	0/1	1/1	1/1	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	18001240	SNP-3.18000021.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	./.	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	./.	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	./.	1/1	1/1
+3	18001843	SNP-3.18000624.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	./.	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	./.	0/0	0/0	0/0	0/1	0/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/1	0/0	0/1	0/1	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18002512	SNP-3.18001293.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18004541	SNP-3.18003322.	A	G	.	.	PR;EFF=synonymous_variant(LOW||gGt/gGt|p.Gly29Gly/c.86A>G|1500|LOC_Os03g31560|protein_coding|CODING|LOC_Os03g31560.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/1	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	./.	0/0	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	./.	0/1	0/0	1/1	1/1	./.	./.	1/1	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	./.	0/1	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	0/0	1/1	./.	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/1	0/1	./.	0/0	./.	0/0	./.	0/1	0/0	./.	0/0	0/0	0/1	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0
+3	18005201	SNP-3.18003982.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cGa/cAa|p.Arg249Gln/c.746C>A|1500|LOC_Os03g31560|protein_coding|CODING|LOC_Os03g31560.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/0	1/1	1/1	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1
+3	18005519	SNP-3.18004300.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aCt/aGt|p.Thr355Ser/c.1064A>G|1500|LOC_Os03g31560|protein_coding|CODING|LOC_Os03g31560.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	./.	0/0	./.	0/0	./.	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	./.	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	1/1	./.	0/0	0/0	1/1	1/1	./.	./.	0/0	./.	./.	0/0	0/1	./.	1/1	1/1	1/1	0/0	./.	./.	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1
+3	18006612	SNP-3.18005393.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gTt/gAt|p.Val643Asp/c.1928C>A|1500|LOC_Os03g31560|protein_coding|CODING|LOC_Os03g31560.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18007453	SNP-3.18006234.	A	G	.	.	PR;EFF=synonymous_variant(LOW||cGc/cGc|p.Arg805Arg/c.2414A>G|1500|LOC_Os03g31560|protein_coding|CODING|LOC_Os03g31560.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	0/0	./.	1/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	./.	1/1	0/0	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	./.	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0
+3	18007753	SNP-3.18006534.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aTa/aGa|p.Ile905Arg/c.2714A>G|1500|LOC_Os03g31560|protein_coding|CODING|LOC_Os03g31560.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0
+3	18008086	SNP-3.18006867.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|ttT/ttA|p.Phe946Leu/c.2838C>A|1500|LOC_Os03g31560|protein_coding|CODING|LOC_Os03g31560.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	1/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18008186	SNP-3.18006967.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.2927+11C>A|1500|LOC_Os03g31560|protein_coding|CODING|LOC_Os03g31560.1|4|1)	GT	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	./.	1/1	./.	0/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	./.	0/0	0/0	./.	./.	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18009334	SNP-3.18008115.	C	A	.	.	PR;EFF=synonymous_variant(LOW||tAc/tAc|p.Tyr1116Tyr/c.3347C>A|1500|LOC_Os03g31560|protein_coding|CODING|LOC_Os03g31560.1|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	./.	0/0	0/1	./.	./.	0/0	0/0	0/0	0/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/1	0/0	./.	./.	1/1	0/0
+3	18010017	SNP-3.18008798.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.3647+51C>A|1500|LOC_Os03g31560|protein_coding|CODING|LOC_Os03g31560.1|9|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/1	./.	0/0	0/1	0/0	0/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	18010363	SNP-3.18009144.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.3827+19C>A|1500|LOC_Os03g31560|protein_coding|CODING|LOC_Os03g31560.1|11|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18010609	SNP-3.18009390.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Cgc/Ggc|p.Arg1304Gly/c.3910A>G|1500|LOC_Os03g31560|protein_coding|CODING|LOC_Os03g31560.1|12|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	18010730	SNP-3.18009511.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gTt/gAt|p.Val1344Asp/c.4031C>A|1500|LOC_Os03g31560|protein_coding|CODING|LOC_Os03g31560.1|12|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18011285	SNP-3.18010066.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.4464+39C>A|1500|LOC_Os03g31560|protein_coding|CODING|LOC_Os03g31560.1|13|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/1	0/0	0/1	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/1	./.	1/1	0/0	0/0	./.	0/0	0/1	0/1	./.	0/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	./.	./.	0/0	0/0	./.	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/1	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/1	./.	0/0	./.	1/1	0/0
+3	18012005	SNP-3.18010786.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	./.	./.	0/0	0/0	1/1	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	./.	1/1	0/0	./.	1/1	1/1	./.	./.	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1
+3	18012176	SNP-3.18010957.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	1/1	0/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	./.	0/1	1/1	0/1	1/1	0/1	1/1	1/1	0/1	1/1	0/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/0	0/1	1/1	0/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	1/1	./.	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	18012537	SNP-3.18011318.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	18013199	SNP-3.18011980.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	18014557	SNP-3.18013338.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18015174	SNP-3.18013955.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	18017113	SNP-3.18015894.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ggC/ggG|p.Gly191Gly/c.573A>G|484|LOC_Os03g31570|protein_coding|CODING|LOC_Os03g31570.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	18018195	SNP-3.18016976.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.625-61A>G|484|LOC_Os03g31570|protein_coding|CODING|LOC_Os03g31570.1|4|1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	18018315	SNP-3.18017096.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|tcA/tcG|p.Ser228Ser/c.684A>G|484|LOC_Os03g31570|protein_coding|CODING|LOC_Os03g31570.1|5|1)	GT	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0
+3	18018917	SNP-3.18017698.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.781-27A>G|484|LOC_Os03g31570|protein_coding|CODING|LOC_Os03g31570.1|6|1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	18019947	SNP-3.18018728.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|acT/acA|p.Thr358Thr/c.1074C>A|484|LOC_Os03g31570|protein_coding|CODING|LOC_Os03g31570.1|9|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	./.	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/1	0/0	1/1	0/0
+3	18020149	SNP-3.18018930.	C	A	.	.	PR;EFF=splice_region_variant(LOW|||c.1188C>A|484|LOC_Os03g31570|protein_coding|CODING|LOC_Os03g31570.1|10|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW||cgA/cgA|p.Arg396Arg/c.1188C>A|484|LOC_Os03g31570|protein_coding|CODING|LOC_Os03g31570.1|10|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18022146	SNP-3.18020927.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	./.	./.	1/1	./.	./.	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	./.	./.	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	0/0	./.	./.	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.
+3	18022434	SNP-3.18021215.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1
+3	18023297	SNP-3.18022078.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	18023858	SNP-3.18022639.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	18024093	SNP-3.18022874.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	./.	./.	./.	0/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18027733	SNP-3.18026514.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.280-109C>A|1056|LOC_Os03g31594|protein_coding|CODING|LOC_Os03g31594.1|1|1),intron_variant(MODIFIER|||c.280-109C>A|1052|LOC_Os03g31594|protein_coding|CODING|LOC_Os03g31594.2|1|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	./.	0/0	0/0	0/1	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/1	0/0	1/1	0/0
+3	18027874	SNP-3.18026655.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|aaA/aaG|p.Lys104Lys/c.312A>G|1056|LOC_Os03g31594|protein_coding|CODING|LOC_Os03g31594.1|2|1),synonymous_variant(LOW|SILENT|aaA/aaG|p.Lys104Lys/c.312A>G|1052|LOC_Os03g31594|protein_coding|CODING|LOC_Os03g31594.2|2|1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	18030683	SNP-3.18029464.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.456+2665A>G|1056|LOC_Os03g31594|protein_coding|CODING|LOC_Os03g31594.1|2|1),intron_variant(MODIFIER|||c.456+2665A>G|1052|LOC_Os03g31594|protein_coding|CODING|LOC_Os03g31594.2|2|1)	GT	0/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/1	./.	./.	./.	./.	1/1	./.	./.	./.	./.	./.	1/1	./.	0/0	1/1	0/0	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	1/1	0/0	0/0	./.	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/1	./.	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1
+3	18035945	SNP-3.18034726.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.457-800A>G|1056|LOC_Os03g31594|protein_coding|CODING|LOC_Os03g31594.1|2|1),intron_variant(MODIFIER|||c.457-800A>G|1052|LOC_Os03g31594|protein_coding|CODING|LOC_Os03g31594.2|2|1)	GT	1/1	0/0	0/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	1/1	0/1	./.	./.	1/1	1/1	1/1	./.	0/0	./.	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1
+3	18037971	SNP-3.18036752.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gCa/gGa|p.Ala361Gly/c.1082A>G|1056|LOC_Os03g31594|protein_coding|CODING|LOC_Os03g31594.1|8|1|WARNING_REF_DOES_NOT_MATCH_GENOME),missense_variant(MODERATE|MISSENSE|gCa/gGa|p.Ala361Gly/c.1082A>G|1052|LOC_Os03g31594|protein_coding|CODING|LOC_Os03g31594.2|8|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/1	0/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/1	0/1	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	./.	./.	./.	0/0	0/0	0/0
+3	18038175	SNP-3.18036956.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|tTg/tGg|p.Leu429Trp/c.1286A>G|1056|LOC_Os03g31594|protein_coding|CODING|LOC_Os03g31594.1|8|1|WARNING_REF_DOES_NOT_MATCH_GENOME),missense_variant(MODERATE|MISSENSE|tTg/tGg|p.Leu429Trp/c.1286A>G|1052|LOC_Os03g31594|protein_coding|CODING|LOC_Os03g31594.2|8|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	1/1	./.	1/1	./.	1/1	1/1	0/0	1/1	./.	1/1	./.	1/1	1/1	0/1	0/0	./.	1/1	0/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	1/1	1/1	1/1	0/1	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	./.	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0
+3	18040460	SNP-3.18039241.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.2749+12C>A|1056|LOC_Os03g31594|protein_coding|CODING|LOC_Os03g31594.1|12|1),intron_variant(MODIFIER|||c.2749+12C>A|1052|LOC_Os03g31594|protein_coding|CODING|LOC_Os03g31594.2|12|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18041701	SNP-3.18040482.	C	A	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||369|c.*369C>A|1056|LOC_Os03g31594|protein_coding|CODING|LOC_Os03g31594.1|16|1|WARNING_REF_DOES_NOT_MATCH_GENOME),3_prime_UTR_variant(MODIFIER||369|c.*369C>A|1052|LOC_Os03g31594|protein_coding|CODING|LOC_Os03g31594.2|16|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18041916	SNP-3.18040697.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18042800	SNP-3.18041581.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18043099	SNP-3.18041880.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	18043844	SNP-3.18042625.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	./.	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/1	0/0	1/1	0/0	1/1	./.	0/1	./.	0/0	1/1	./.	0/0	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18043944	SNP-3.18042725.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	./.	0/0	1/1	0/0	1/1	./.	0/0	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	./.	1/1	./.	1/1	./.	./.	./.	./.	1/1	1/1	0/1	./.	1/1	./.	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	18044408	SNP-3.18043189.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	1/1	0/1	1/1	0/1	./.	0/1	./.	1/1	./.	./.	0/1	1/1	0/1	0/1	1/1	0/1	0/0	./.	0/1	./.	0/1	0/1	./.	0/1	0/1	0/1	0/1	0/1	0/0	0/1	./.	./.	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	./.	0/1	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	./.	0/1	0/1	1/1	0/1	0/1	0/1	0/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	./.	./.	0/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	./.	./.	./.	0/0	./.	./.	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18044523	SNP-3.18043304.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	18044759	SNP-3.18043540.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/0	1/1
+3	18044873	SNP-3.18043654.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/1	1/1	1/1	./.	./.	0/1	0/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1
+3	18045182	SNP-3.18043963.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/1	0/0	./.	0/0	0/1	0/0	0/0	./.	1/1	./.	./.	1/1	0/1	0/0	./.	./.	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	0/1	1/1	./.	1/1	./.	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	1/1	0/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	18046030	SNP-3.18044811.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gTa/gAa|p.Val5Glu/c.14C>A|1232|LOC_Os03g31620|protein_coding|CODING|LOC_Os03g31620.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	0/0	./.	./.	1/1	0/0	1/1	0/0	./.	0/0	./.	./.	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	18046077	SNP-3.18044858.	A	G	.	.	PR;EFF=synonymous_variant(LOW||Gga/Gga|p.Gly21Gly/c.61A>G|1232|LOC_Os03g31620|protein_coding|CODING|LOC_Os03g31620.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	1/1	./.	./.	1/1	0/0	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	0/0	./.	./.	./.	./.	0/0	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	./.	./.	1/1	1/1	0/0	./.	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	./.	0/0
+3	18048585	SNP-3.18047366.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|acA/acG|p.Thr729Thr/c.2187A>G|1232|LOC_Os03g31620|protein_coding|CODING|LOC_Os03g31620.1|5|1)	GT	1/1	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	./.	./.	./.	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	1/1	0/0	./.	./.	./.	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	./.	0/0	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	./.	./.	1/1	0/0	1/1	0/0	1/1	1/1	./.	./.	./.	1/1	0/0	./.	./.	./.	1/1	1/1	1/1	0/0	0/0	1/1	./.	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	18053020	SNP-3.18051801.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|tTt/tAt|p.Phe4Tyr/c.11C>A|788|LOC_Os03g31630|protein_coding|CODING|LOC_Os03g31630.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	0/0	1/1	./.	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/1	0/1	0/1	1/1	0/0	1/1	./.	0/1	0/1	0/1	./.	0/1	./.	0/1	1/1	1/1	1/1	1/1	0/1	./.	./.	0/0	1/1	0/0	1/1	0/1	./.	0/0	0/1	0/0	1/1	0/0	0/1	1/1	0/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	0/1	1/1	0/1	./.	0/1	1/1	0/1	1/1	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	18053071	SNP-3.18051852.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cTc/cGc|p.Leu21Arg/c.62A>G|788|LOC_Os03g31630|protein_coding|CODING|LOC_Os03g31630.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	./.	./.	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	./.	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0
+3	18054349	SNP-3.18053130.	A	G	.	.	PR;EFF=synonymous_variant(LOW||aGc/aGc|p.Ser447Ser/c.1340A>G|788|LOC_Os03g31630|protein_coding|CODING|LOC_Os03g31630.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	./.	0/0	./.	./.	./.	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	0/0	1/1	1/1	1/1	1/1	./.	0/0	./.	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	./.	./.	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	./.	0/0	./.	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	./.	0/0	./.	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	1/1	1/1	0/0	1/1
+3	18062019	SNP-3.18060800.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	./.	./.	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	18063349	SNP-3.18062130.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	./.	./.	0/0	1/1	1/1	0/1	0/0	1/1	./.	0/0	./.	1/1	./.	0/0	0/0	0/0	0/1	./.	0/1	./.	./.	0/0	1/1	./.	0/0	./.	0/0	0/1	0/0	./.	0/0	0/0	1/1	0/1	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/1	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/1	./.	0/1	0/0	./.	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	./.	0/0	0/0	./.	./.	0/1	./.	0/1	0/0	./.	0/0	0/0	./.	1/1	0/0	./.	./.	0/0	1/1	0/0	0/0	0/1	0/0	0/1	./.	0/0	0/0	1/1	./.	0/0	0/0	0/1	0/0	0/1	./.	./.	0/1	0/0	./.	./.	./.	1/1	0/0	0/0	0/1	0/0	0/1	0/0	1/1	1/1	./.	./.	1/1	./.	1/1	0/0	1/1	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	./.	1/1	0/0	./.	./.	0/0
+3	18063776	SNP-3.18062557.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	./.	0/0	./.	1/1	1/1	./.	1/1	0/1	1/1	1/1	./.	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	./.	./.	0/1	0/1	./.	1/1	./.	0/0	./.	./.	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1
+3	18066116	SNP-3.18064897.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/1	./.	0/1	1/1	./.	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1
+3	18068233	SNP-3.18067014.	A	G	.	.	PR;EFF=synonymous_variant(LOW||Gac/Gac|p.Asp276Asp/c.826A>G|700|LOC_Os03g31640|protein_coding|CODING|LOC_Os03g31640.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	./.	0/0	./.	./.	./.	0/0	0/0	1/1	./.	./.	./.	1/1	./.	0/0	1/1	./.	1/1	1/1	./.	./.	1/1	0/0	./.	./.	./.	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	./.	./.	./.	./.	1/1	1/1	./.	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/1	0/0	./.	1/1	./.	./.	./.	./.	0/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	./.	0/0	./.	./.	./.	./.	./.	./.	./.	./.	0/0	1/1	./.	1/1	1/1	./.	0/1	0/0	./.	1/1	1/1	1/1	0/1	1/1	0/0	./.	./.	1/1	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	1/1	./.	./.	0/0	1/1
+3	18068263	SNP-3.18067044.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Cac/Aac|p.His286Asn/c.856C>A|700|LOC_Os03g31640|protein_coding|CODING|LOC_Os03g31640.1|2|1)	GT	0/0	1/1	0/1	1/1	0/1	0/0	0/1	1/1	1/1	0/1	0/1	0/0	0/1	0/1	0/1	1/1	0/1	./.	0/1	0/1	0/1	0/1	0/1	0/0	./.	0/1	0/1	0/0	0/1	0/1	0/1	0/1	0/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/1	1/1	0/1	0/1	1/1	./.	0/1	./.	0/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/1	0/0	0/1	0/1	0/1	0/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	./.	1/1	0/0	0/1	0/0	0/0	./.	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18068326	SNP-3.18067107.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Caa/Gaa|p.Gln307Glu/c.919A>G|700|LOC_Os03g31640|protein_coding|CODING|LOC_Os03g31640.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/1	0/0	1/1	0/0	0/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	./.	1/1	0/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/1	./.	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	18068469	SNP-3.18067250.	A	G	.	.	PR;EFF=splice_acceptor_variant(HIGH|||c.981A>G|700|LOC_Os03g31640|protein_coding|CODING|LOC_Os03g31640.1|3|1),intron_variant(MODIFIER|||c.981-1A>G|700|LOC_Os03g31640|protein_coding|CODING|LOC_Os03g31640.1|2|1);LOF=(LOC_Os03g31640|LOC_Os03g31640|1|1.00)	GT	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	0/1	./.	./.	0/1	./.	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	1/1	0/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0	1/1	1/1	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0
+3	18068608	SNP-3.18067389.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|agC/agG|p.Ser373Arg/c.1119A>G|700|LOC_Os03g31640|protein_coding|CODING|LOC_Os03g31640.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1
+3	18069083	SNP-3.18067864.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cGt/cAt|p.Arg482His/c.1445C>A|700|LOC_Os03g31640|protein_coding|CODING|LOC_Os03g31640.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	./.	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/1	0/0	0/1	0/1	1/1	0/0	0/1	0/1	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18069191	SNP-3.18067972.	A	G	.	.	PR;EFF=synonymous_variant(LOW||gcG/gcG|p.Ala493Ala/c.1479A>G|700|LOC_Os03g31640|protein_coding|CODING|LOC_Os03g31640.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	./.	./.	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	./.	./.	0/0	./.	./.	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0
+3	18069653	SNP-3.18068434.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.1760-48A>G|700|LOC_Os03g31640|protein_coding|CODING|LOC_Os03g31640.1|6|1)	GT	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1	./.	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	1/1	1/1	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	./.	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	./.	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0
+3	18070684	SNP-3.18069465.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cAc/cTc|p.His1225Leu/c.3674G>T|1227|LOC_Os03g31650|protein_coding|CODING|LOC_Os03g31650.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	1/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	./.	0/0	1/1	0/0	1/1	./.	1/1	./.	./.	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/1	1/1	./.	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	./.	0/0	./.	1/1	0/0	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	./.	./.	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	./.	0/0	./.	./.	0/0
+3	18071668	SNP-3.18070449.	C	A	.	.	PR;EFF=stop_gained(HIGH|NONSENSE|Gaa/Taa|p.Glu983*/c.2947G>T|1227|LOC_Os03g31650|protein_coding|CODING|LOC_Os03g31650.1|3|1);LOF=(LOC_Os03g31650|LOC_Os03g31650|1|1.00);NMD=(LOC_Os03g31650|LOC_Os03g31650|1|1.00)	GT	0/0	0/1	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	./.	./.	./.	1/1	0/0	0/1	0/0	1/1	1/1	0/1	1/1	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	1/1	0/0
+3	18074088	SNP-3.18072869.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.1110-132G>T|1227|LOC_Os03g31650|protein_coding|CODING|LOC_Os03g31650.1|1|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	1/1	./.	1/1	./.	./.	1/1	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18076201	SNP-3.18074982.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/1	1/1	0/0	1/1	0/1	1/1	0/1	0/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	0/1	./.	1/1	0/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	./.	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/1	0/1	0/1	0/1	1/1	./.	1/1	1/1	1/1	0/1	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	1/1
+3	18076436	SNP-3.18075217.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	1/1	0/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	0/0	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1
+3	18078290	SNP-3.18077071.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	./.	1/1	0/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	1/1	./.	1/1	1/1	1/1	0/0	./.	0/0	0/1	./.	0/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	18079786	SNP-3.18078567.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	1/1	./.	1/1	0/0	0/0	1/1	./.	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	1/1	./.	1/1	0/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/1	0/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	./.	./.	./.	0/0	1/1	1/1	0/0	./.	./.	1/1	0/0	./.	1/1	1/1	1/1	./.	1/1	0/1	1/1	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	./.	0/1	1/1	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0
+3	18079936	SNP-3.18078717.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aTt/aAt|p.Ile32Asn/c.95C>A|571|LOC_Os03g31660|protein_coding|CODING|LOC_Os03g31660.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18080256	SNP-3.18079037.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Ttg/Atg|p.Leu139Met/c.415C>A|571|LOC_Os03g31660|protein_coding|CODING|LOC_Os03g31660.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	0/1	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	./.	1/1	0/1	1/1	0/1	0/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18080395	SNP-3.18079176.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cTg/cAg|p.Leu185Gln/c.554C>A|571|LOC_Os03g31660|protein_coding|CODING|LOC_Os03g31660.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	./.	1/1	0/0	0/0	0/0	./.	./.	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/1	./.	0/1	0/0	0/0	0/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	0/0	0/1	./.	./.	1/1	1/1	0/0	0/1	0/0	./.	0/0	0/1	0/1	1/1	0/0	0/0	1/1	0/1	0/0	1/1	1/1	0/1	1/1	./.	1/1	1/1	0/1	1/1	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	18080830	SNP-3.18079611.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aGg/aAg|p.Arg330Lys/c.989C>A|571|LOC_Os03g31660|protein_coding|CODING|LOC_Os03g31660.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	./.	1/1	0/1	0/0	0/1	1/1	1/1	0/1	0/1	0/1	0/1	./.	0/1	1/1	0/1	0/0	0/1	0/1	0/1	0/1	0/1	1/1	0/1	0/1	./.	0/1	0/1	0/1	0/1	0/1	0/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	./.	0/1	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/1	0/1	0/1	0/1	1/1	0/1	0/1	./.	0/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/1	0/0	0/1	./.	0/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	./.	0/1	0/1	0/0	0/1	0/1	0/0	./.	./.	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18080836	SNP-3.18079617.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|tCc/tGc|p.Ser332Cys/c.995A>G|571|LOC_Os03g31660|protein_coding|CODING|LOC_Os03g31660.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),splice_region_variant(LOW|||c.995A>G|571|LOC_Os03g31660|protein_coding|CODING|LOC_Os03g31660.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	./.	./.	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	18081440	SNP-3.18080221.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aaC/aaA|p.Asn455Lys/c.1365C>A|571|LOC_Os03g31660|protein_coding|CODING|LOC_Os03g31660.1|2|1)	GT	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/1	0/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0
+3	18082040	SNP-3.18080821.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|gcC/gcT|p.Ala156Ala/c.468G>T|173|LOC_Os03g31670|protein_coding|CODING|LOC_Os03g31670.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	1/1	./.	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	./.	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	./.	1/1	1/1	./.	./.	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	./.	./.	./.	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	./.
+3	18082263	SNP-3.18081044.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.351-106T>C|173|LOC_Os03g31670|protein_coding|CODING|LOC_Os03g31670.1|2|1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/0	1/1
+3	18082361	SNP-3.18081142.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.350+145T>C|173|LOC_Os03g31670|protein_coding|CODING|LOC_Os03g31670.1|2|1)	GT	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	./.	./.	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	0/0	0/0	1/1	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	./.	1/1	./.	1/1	./.	./.	1/1	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0
+3	18083205	SNP-3.18081986.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	18083836	SNP-3.18082617.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/1	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	0/0	./.	0/0	1/1	./.	0/1	0/0	./.	0/0	./.	0/0	./.	./.	1/1	0/0	0/0	1/1	0/1	0/0	1/1	1/1	0/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	18083935	SNP-3.18082716.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/1	0/0	./.	1/1	0/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	0/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	18084528	SNP-3.18083309.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	./.	1/1	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	0/0	1/1	./.	0/0	./.	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	1/1	1/1	0/0	./.	./.	0/0	1/1	./.	1/1	./.	./.	./.	1/1	0/0	1/1	1/1	./.	./.	0/0	./.	1/1	./.	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	1/1	0/0	./.	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	./.	0/0	./.	./.	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	1/1	./.	1/1
+3	18084790	SNP-3.18083571.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	./.	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	./.	./.	0/1	0/0	0/0	1/1	0/1	0/0	1/1	1/1	./.	1/1	0/0	./.	1/1	0/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18085078	SNP-3.18083859.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	18086336	SNP-3.18085117.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.251+256A>G|98|LOC_Os03g31679|protein_coding|CODING|LOC_Os03g31679.1|2|1)	GT	1/1	0/0	./.	0/0	0/0	1/1	0/1	0/0	./.	0/1	./.	1/1	0/1	./.	./.	0/0	./.	1/1	0/0	0/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	0/0	1/1
+3	18087754	SNP-3.18086535.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.1575-5G>T|576|LOC_Os03g31690|protein_coding|CODING|LOC_Os03g31690.1|9|1)	GT	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0
+3	18088128	SNP-3.18086909.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.1502-32T>C|576|LOC_Os03g31690|protein_coding|CODING|LOC_Os03g31690.1|8|1)	GT	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/1	./.	1/1	0/1	./.	./.	0/0	0/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	./.	0/1	1/1	0/1	0/1	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/1	0/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1
+3	18091827	SNP-3.18090608.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.349+381G>T|576|LOC_Os03g31690|protein_coding|CODING|LOC_Os03g31690.1|2|1)	GT	0/0	1/1	./.	1/1	0/0	./.	0/0	./.	1/1	0/0	./.	./.	0/0	0/1	./.	./.	./.	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	1/1	0/0
+3	18094199	SNP-3.18092980.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/1	0/0	1/1	0/1	0/1	0/0	0/0	./.	1/1	0/0	./.	./.	0/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	18095781	SNP-3.18094562.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/1	1/1	./.	0/0	./.	1/1	1/1	./.	0/1	./.	0/1	0/1	0/0	1/1	0/1	0/0	0/1	0/1	0/0	0/1	0/1	0/1	0/1	0/1	0/1	0/1	0/1	0/1	0/1	0/1	0/1	0/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/1	0/0	1/1	0/0	0/1	0/1	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/1	0/1	./.	0/1	1/1	./.	0/1	0/1	0/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/1	0/0	0/1	0/1	0/1	0/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	0/1	0/0	0/1	./.	0/0	0/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18098167	SNP-3.18096948.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	./.	0/0	0/0	./.	./.	./.	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	./.	0/0	0/0	./.	./.	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	./.	0/0	./.	./.	1/1	1/1	1/1	./.	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18098474	SNP-3.18097255.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/1	1/1	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0
+3	18100013	SNP-3.18098794.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	1/1	0/0	0/0	1/1	./.	./.	0/0	1/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	1/1	./.	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	1/1	./.	0/0	./.	./.	./.	1/1	0/0	0/0	./.	./.	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	./.	./.	0/0	0/0	1/1	1/1	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	1/1	1/1	0/0	./.	./.
+3	18101093	SNP-3.18099874.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	1/1	0/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	18101803	SNP-3.18100584.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	1/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	./.	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	./.	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	./.	1/1	./.	./.	./.	1/1	./.	./.	1/1	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	./.	./.	0/0	0/0	1/1	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	./.	./.	1/1	1/1	0/0	0/0
+3	18102046	SNP-3.18100827.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	./.	0/1	0/0	0/0	./.	./.	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	1/1	0/0	0/0	./.	0/0	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1
+3	18107278	SNP-3.18106059.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/1	1/1	0/1	./.	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/1	0/1	0/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/1	0/0	0/1	0/1	./.	0/1	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1
+3	18108444	SNP-3.18107225.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18109625	SNP-3.18108406.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	0/1	1/1	0/0	0/0	0/1	1/1	1/1	./.	./.	0/0	0/0	0/1	0/0	1/1	0/1	0/0	0/0	0/0	0/1	0/1	0/0	1/1	0/1	0/0	./.	0/0	0/0	./.	0/1	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/1	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	1/1	0/1	0/0	0/1	0/1	0/1	0/0	0/1	0/0	1/1	./.	./.	0/1	0/1	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/1	0/1	0/0	1/1	0/0
+3	18110366	SNP-3.18109147.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.104-165T>C|76|LOC_Os03g31706|protein_coding|CODING|LOC_Os03g31706.2|3|1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	18111046	SNP-3.18109827.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|caG/caC|p.Gln18His/c.54T>C|76|LOC_Os03g31706|protein_coding|CODING|LOC_Os03g31706.2|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0
+3	18112999	SNP-3.18111780.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	./.	./.	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	./.	./.	./.	1/1	./.	./.	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	18117044	SNP-3.18115825.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18117720	SNP-3.18116501.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/1	0/0	1/1	0/0	./.	0/0	0/0	0/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0
+3	18123585	SNP-3.18122366.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.-13+3845C>A|885|LOC_Os03g31730|protein_coding|CODING|LOC_Os03g31730.1|2|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18125023	SNP-3.18123804.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.-12-2725C>A|885|LOC_Os03g31730|protein_coding|CODING|LOC_Os03g31730.1|2|1)	GT	./.	1/1	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	./.	./.	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	./.	0/0	0/0	./.	./.	./.	0/0	./.	1/1	./.	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	1/1	./.	./.	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	./.	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	1/1	1/1	1/1	./.	./.	1/1	./.	0/0	1/1	1/1	1/1	./.	0/0	1/1	./.	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	./.	0/0	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	./.	./.	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	1/1	./.	1/1	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0
+3	18125204	SNP-3.18123985.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.-12-2544A>G|885|LOC_Os03g31730|protein_coding|CODING|LOC_Os03g31730.1|2|1)	GT	0/0	0/0	./.	0/0	./.	1/1	./.	0/0	0/0	0/0	./.	./.	./.	0/0	./.	0/0	1/1	1/1	./.	1/1	0/0	./.	1/1	./.	1/1	./.	./.	./.	1/1	./.	1/1	./.	1/1	0/0	./.	./.	./.	./.	0/1	./.	./.	./.	./.	1/1	./.	./.	0/0	./.	./.	0/0	./.	0/0	1/1	./.	./.	./.	./.	1/1	1/1	./.	0/0	0/1	./.	1/1	0/0	0/1	0/1	1/1	./.	./.	./.	./.	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	./.	./.	1/1	1/1	1/1	./.	./.	1/1	0/0	0/1	1/1	./.	1/1	./.	1/1	1/1	0/0	./.	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	1/1	./.	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	./.	./.	./.	0/0	1/1
+3	18127525	SNP-3.18126306.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.-12-223A>G|885|LOC_Os03g31730|protein_coding|CODING|LOC_Os03g31730.1|2|1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	./.	./.	./.	./.	0/0	0/1	0/1	0/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/1	1/1	1/1	./.	1/1	0/0	0/1	0/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1
+3	18129260	SNP-3.18128041.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.68-31A>G|885|LOC_Os03g31730|protein_coding|CODING|LOC_Os03g31730.1|3|1)	GT	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	18130823	SNP-3.18129604.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gaC/gaA|p.Asp94Glu/c.282C>A|885|LOC_Os03g31730|protein_coding|CODING|LOC_Os03g31730.1|6|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18130888	SNP-3.18129669.	C	A	.	.	PR;EFF=synonymous_variant(LOW||gAg/gAg|p.Glu116Glu/c.347C>A|885|LOC_Os03g31730|protein_coding|CODING|LOC_Os03g31730.1|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18132049	SNP-3.18130830.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.790+718A>G|885|LOC_Os03g31730|protein_coding|CODING|LOC_Os03g31730.1|6|1)	GT	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0
+3	18134289	SNP-3.18133070.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.1181+134C>A|885|LOC_Os03g31730|protein_coding|CODING|LOC_Os03g31730.1|11|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18137206	SNP-3.18135987.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ctT/ctA|p.Leu531Leu/c.1593C>A|885|LOC_Os03g31730|protein_coding|CODING|LOC_Os03g31730.1|16|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	18137340	SNP-3.18136121.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aTc/aAc|p.Ile576Asn/c.1727C>A|885|LOC_Os03g31730|protein_coding|CODING|LOC_Os03g31730.1|16|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18140715	SNP-3.18139496.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.1992+32A>G|885|LOC_Os03g31730|protein_coding|CODING|LOC_Os03g31730.1|18|1)	GT	0/0	0/0	1/1	./.	./.	./.	1/1	0/0	0/0	1/1	1/1	./.	./.	1/1	./.	./.	1/1	0/0	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	1/1	./.	1/1	1/1	0/0	0/0
+3	18141261	SNP-3.18140042.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.1993-147C>A|885|LOC_Os03g31730|protein_coding|CODING|LOC_Os03g31730.1|18|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18141694	SNP-3.18140475.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|caT/caG|p.His725Gln/c.2175A>G|885|LOC_Os03g31730|protein_coding|CODING|LOC_Os03g31730.1|20|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/1	./.	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	./.	0/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0
+3	18143019	SNP-3.18141800.	C	A	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||165|c.*69C>A|885|LOC_Os03g31730|protein_coding|CODING|LOC_Os03g31730.1|23|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/1	./.	0/1	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	./.	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/1	0/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18145208	SNP-3.18143989.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	0/1	0/1	0/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	18147444	SNP-3.18146225.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/1	./.	0/0	./.	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/1	./.	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	./.	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	./.	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18148988	SNP-3.18147769.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18149311	SNP-3.18148092.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18149640	SNP-3.18148421.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	./.	0/0	./.	./.	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	./.	0/1	./.	1/1	./.	./.	./.	0/0	0/0	./.	./.	1/1	1/1	./.	./.	./.	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	./.	0/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	1/1	./.	1/1	0/1	./.	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1
+3	18151046	SNP-3.18149827.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	1/1	0/1	1/1	0/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/1	1/1	0/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1
+3	18151458	SNP-3.18150239.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0
+3	18151506	SNP-3.18150287.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/1	0/0	./.	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0
+3	18152715	SNP-3.18151496.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/1	1/1	0/0	1/1	0/0	0/1	1/1	0/0	1/1	./.	0/0	./.	0/1	0/1	./.	1/1	0/1	0/1	./.	0/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/1	1/1	./.	0/0	0/0	./.	1/1	0/0	./.	1/1	./.	./.	./.	1/1	1/1	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	18154695	SNP-3.18153476.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.2184+69T>C|887|LOC_Os03g31750|protein_coding|CODING|LOC_Os03g31750.1|13|1),intron_variant(MODIFIER|||c.1707+69T>C|728|LOC_Os03g31750|protein_coding|CODING|LOC_Os03g31750.2|12|1),intron_variant(MODIFIER|||c.2199+69T>C|892|LOC_Os03g31750|protein_coding|CODING|LOC_Os03g31750.3|13|1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/1	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	18158943	SNP-3.18157724.	C	A	.	.	PR;EFF=5_prime_UTR_variant(MODIFIER||343|c.-75G>T|728|LOC_Os03g31750|protein_coding|CODING|LOC_Os03g31750.2|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),intron_variant(MODIFIER|||c.475-340G>T|887|LOC_Os03g31750|protein_coding|CODING|LOC_Os03g31750.1|2|1),intron_variant(MODIFIER|||c.475-340G>T|892|LOC_Os03g31750|protein_coding|CODING|LOC_Os03g31750.3|2|1)	GT	0/0	0/0	1/1	./.	./.	0/0	./.	0/0	./.	./.	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	0/0	./.	1/1	./.	1/1	0/0	0/0	1/1	./.	./.	0/0	./.	./.	./.	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	./.	1/1	1/1	./.	./.	1/1	./.	0/0	0/0	./.	0/0	./.	./.	./.	./.	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	./.	0/0	./.	./.	0/0	./.	1/1	./.	./.	1/1	1/1	1/1	./.	./.	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	./.	./.	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0
+3	18160285	SNP-3.18159066.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	./.	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	./.	./.	0/1	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	./.	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	./.	./.	./.	./.	0/0	./.	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	0/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0
+3	18160356	SNP-3.18159137.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	18162961	SNP-3.18161742.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	18163077	SNP-3.18161858.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	18163718	SNP-3.18162499.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	./.	0/1	0/0	0/1	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/1	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/1	./.	1/1	1/1	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	18163964	SNP-3.18162745.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	./.	1/1	./.	0/0	0/0	0/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	./.	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	1/1	0/0
+3	18164335	SNP-3.18163116.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	./.	0/0	./.	./.	./.	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18166088	SNP-3.18164869.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	18166305	SNP-3.18165086.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18169292	SNP-3.18168073.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.422+352G>T|218|LOC_Os03g31760|protein_coding|CODING|LOC_Os03g31760.1|4|1)	GT	./.	1/1	./.	1/1	./.	0/0	./.	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	./.	0/0	1/1	0/0
+3	18170132	SNP-3.18168913.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Atg/Ctg|p.Met109Leu/c.325T>C|218|LOC_Os03g31760|protein_coding|CODING|LOC_Os03g31760.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	18170561	SNP-3.18169342.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.281+80G>T|218|LOC_Os03g31760|protein_coding|CODING|LOC_Os03g31760.1|2|1)	GT	0/0	1/1	0/0	1/1	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	0/1	./.	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	0/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18171460	SNP-3.18170241.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	./.	./.	0/0	0/0	0/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/1	0/1	0/0	./.	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	./.	./.	1/1	0/0
+3	18171786	SNP-3.18170567.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	18175859	SNP-3.18174640.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/1	1/1	0/1	0/0	0/0	1/1	1/1	./.	0/1	0/1	0/0	./.	0/0	1/1	1/1	0/0	./.	1/1	0/0	./.	./.	0/0	0/1	0/0	./.	0/1	0/1	./.	./.	1/1	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	./.	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	./.	1/1	0/0	0/0	0/1	./.	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/1	0/1	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	0/1	0/1	./.	1/1	0/1	./.	./.	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/0	1/1	./.	1/1	./.	./.	./.	0/0	./.	0/0	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	18176323	SNP-3.18175104.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	./.	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	0/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/1	0/0	1/1	0/0
+3	18176660	SNP-3.18175441.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/1	1/1	1/1	0/0	0/0	0/1	0/0	0/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	18176783	SNP-3.18175564.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/1	./.	./.	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/1	0/0	1/1	./.	0/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	./.	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/1	0/0
+3	18178565	SNP-3.18177346.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	1/1	0/1	./.	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	./.	0/0	1/1	1/1	./.	0/1	./.	0/1	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	./.	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	./.	1/1	./.	0/0	./.	0/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	./.	0/0	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1
+3	18178993	SNP-3.18177774.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	./.	0/0
+3	18180388	SNP-3.18179169.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/1	1/1	0/0	0/0	0/1	1/1	1/1	./.	0/0	./.	0/0	./.	0/0	1/1	./.	./.	0/1	0/0	1/1	0/0	1/1	./.	./.	./.	./.	0/0	0/0	0/0	1/1	./.	./.	./.	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	./.	0/0	./.	1/1	./.	0/1	1/1	./.	./.	0/0	0/0	0/0	1/1	0/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	./.	./.	./.	0/0	./.	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.
+3	18180561	SNP-3.18179342.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/1	0/1	./.	0/0	1/1	0/1	./.	0/0	0/0	0/0	0/1	0/1	0/0	0/1	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/1	0/1	1/1	./.	0/1	./.	./.	0/1	0/1	0/1	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	0/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/1	0/0	0/1	0/0	0/0	./.	./.	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/1	0/0	0/1	0/1	0/0	0/1	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	0/0	0/0	0/1	1/1	0/0
+3	18181071	SNP-3.18179852.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	0/0	1/1	0/1	1/1	./.	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	18181591	SNP-3.18180372.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/1	./.	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	./.	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/1	1/1	0/0	1/1	1/1	0/1	./.	./.	0/1	1/1	./.	./.	./.	1/1	./.	1/1	1/1	0/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/1	0/0
+3	18184907	SNP-3.18183688.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	./.	0/0	1/1	./.	1/1	0/0	0/0	1/1	./.	1/1	./.	1/1	./.	0/0	1/1	0/0	1/1	./.	./.	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	./.	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0
+3	18189053	SNP-3.18187834.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	18189077	SNP-3.18187858.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	0/1	0/1	0/0	1/1	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0
+3	18190742	SNP-3.18189523.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	1/1	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	./.	./.	1/1	1/1	0/0	./.	./.	./.	./.	./.	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0
+3	18191154	SNP-3.18189935.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	./.	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	./.	1/1	1/1	1/1	0/1	./.	0/0	0/0	0/0	0/1	0/1	0/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	./.	0/0	./.	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/1
+3	18194227	SNP-3.18193008.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	0/0	0/0	0/0	./.	1/1	0/0	./.	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	./.	0/0	1/1	1/1	0/1	./.	0/0	0/0	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	1/1	./.	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	18194382	SNP-3.18193163.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	./.	0/0	./.	0/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	./.	./.	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/1	0/0	1/1	1/1	0/1	0/1	1/1	0/0	0/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	./.	0/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	./.	./.	./.	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	18195767	SNP-3.18194548.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	./.	1/1	1/1	0/0	0/0
+3	18195904	SNP-3.18194685.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/1	1/1	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	0/1	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/1	0/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	./.	0/0	0/1	0/0	0/0	0/0	1/1
+3	18197169	SNP-3.18195950.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	./.	0/0	1/1	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	./.	1/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	1/1	./.	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	1/1	0/0	1/1	1/1	./.	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0
+3	18197577	SNP-3.18196358.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/1	0/0	0/1	0/0	0/1	0/0	0/0	./.	0/1	./.	1/1	0/1	0/0	0/0	./.	1/1	0/1	0/1	0/0	0/1	0/1	0/0	0/1	0/1	0/1	0/0	0/1	0/0	0/1	0/1	0/1	0/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	0/1	0/1	0/0	./.	0/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/1	0/1	0/1	0/0	./.	0/1	0/1	0/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/1	1/1	0/0	1/1	0/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	./.	1/1	./.	1/1	1/1	0/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	18197640	SNP-3.18196421.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	1/1	1/1	./.	0/0	0/0	0/1	./.	0/1	0/0	0/1	./.	0/0	1/1	0/0	./.	./.	0/1	./.	1/1	0/0	0/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	0/1	0/0	1/1	0/1	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/1	0/1	0/1	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	./.	./.	1/1	1/1	0/0	1/1	1/1	0/1	0/1	0/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0
+3	18197797	SNP-3.18196578.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/1	1/1	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/1	./.	./.	1/1	0/0	./.	0/0	./.	0/0	./.	0/1	0/1	0/0	0/0	0/1	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/1	./.	./.	./.	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/1	0/0	0/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/1	0/1	./.	0/0	0/0	1/1	0/0	0/0	0/1	0/1	0/0	0/0	0/1	0/0	1/1	0/1	0/1	0/0	0/1	1/1	0/0	0/1	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/1	1/1	0/0
+3	18198206	SNP-3.18196987.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18201428	SNP-3.18200209.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	1/1	0/0	./.	./.	./.	./.	./.	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	0/0	./.	0/0	0/0	1/1	1/1	./.	0/0	./.	./.	0/0	./.	./.	1/1	0/0	0/0	1/1	./.	0/0	./.	./.	./.	1/1	1/1	./.	1/1	./.	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	18202173	SNP-3.18200954.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	1/1	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	./.	1/1	1/1	./.	1/1	1/1	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	./.	./.	1/1	1/1	0/0	./.	0/0	1/1	./.	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0
+3	18204250	SNP-3.18203031.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	18205698	SNP-3.18204479.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18206732	SNP-3.18205513.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	18206990	SNP-3.18205771.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	18207367	SNP-3.18206148.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	./.	./.	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/1	1/1	0/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0
+3	18210131	SNP-3.18208912.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/1	0/1	1/1	0/0	1/1	./.	0/0	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/1	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0
+3	18212977	SNP-3.18211758.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.544-301A>G|1837|LOC_Os03g31839|protein_coding|CODING|LOC_Os03g31839.1|4|1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	18217394	SNP-3.18216175.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Gag/Aag|p.Glu515Lys/c.1543C>A|1837|LOC_Os03g31839|protein_coding|CODING|LOC_Os03g31839.1|9|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/1	1/1	0/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/1	./.	0/1	0/0	./.	0/1	0/0	0/0	1/1	0/1	0/0	0/0	./.	0/0	0/1	./.	0/0	./.	0/0	0/0	0/1	0/0	0/0	./.	./.	0/1	0/1	0/1	0/1	0/0	./.	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/1	./.	0/0	0/0	0/1	0/0	0/1	0/0	0/0	./.	./.	./.	0/1	1/1	0/0	0/0	0/1	./.	0/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	./.	./.	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.
+3	18218772	SNP-3.18217553.	C	A	.	.	PR;EFF=synonymous_variant(LOW||cAt/cAt|p.His963His/c.2888C>A|1837|LOC_Os03g31839|protein_coding|CODING|LOC_Os03g31839.1|10|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/1	0/1	0/1	./.	1/1	0/1	0/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	./.	0/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	0/1	./.	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	18220398	SNP-3.18219179.	C	A	.	.	PR;EFF=splice_acceptor_variant(HIGH|||c.3927C>A|1837|LOC_Os03g31839|protein_coding|CODING|LOC_Os03g31839.1|12|1),intron_variant(MODIFIER|||c.3927-2C>A|1837|LOC_Os03g31839|protein_coding|CODING|LOC_Os03g31839.1|11|1);LOF=(LOC_Os03g31839|LOC_Os03g31839|1|1.00)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	1/1	1/1	0/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18221043	SNP-3.18219824.	A	G	.	.	PR;EFF=synonymous_variant(LOW||Gac/Gac|p.Asp1472Asp/c.4414A>G|1837|LOC_Os03g31839|protein_coding|CODING|LOC_Os03g31839.1|14|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	./.	0/0	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	./.	1/1	./.	0/0	./.	1/1	./.	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	0/0	0/0	./.	./.	1/1	./.	./.	./.	./.	./.	0/0	./.	0/0	./.	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	1/1	./.	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	./.	./.	./.	./.	0/0	./.	./.	1/1	./.	0/0	./.	./.	1/1	./.	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	./.	./.	./.	1/1	./.	1/1	./.	1/1	./.	0/0	./.	./.	./.	0/0	./.	1/1	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	1/1	1/1	0/0	./.
+3	18222058	SNP-3.18220839.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Ctg/Atg|p.Leu1727Met/c.5179C>A|1837|LOC_Os03g31839|protein_coding|CODING|LOC_Os03g31839.1|18|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	./.	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	18222085	SNP-3.18220866.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Aac/Gac|p.Asn1736Asp/c.5206A>G|1837|LOC_Os03g31839|protein_coding|CODING|LOC_Os03g31839.1|18|1)	GT	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	./.	0/0	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	./.	./.	./.	./.	0/0	./.	1/1	./.	1/1	./.	0/0	./.	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	./.	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	1/1	0/0	1/1	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	1/1	./.	./.	./.	0/0	./.
+3	18223715	SNP-3.18222496.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	./.	1/1	./.	./.	1/1	1/1	0/0	0/0	1/1	0/0	./.	./.	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	./.	./.	./.	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	./.	1/1	./.	./.	1/1	./.	0/0	1/1	./.	./.	./.	1/1	0/0	1/1	1/1	0/0	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	./.	./.	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	./.	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	./.	1/1	0/0	1/1	1/1	./.	./.	0/0	./.	0/0	0/0	1/1	./.	./.	./.	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	./.	./.
+3	18223828	SNP-3.18222609.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	0/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18224813	SNP-3.18223594.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	./.	0/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/1	./.	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	./.	0/1	0/1	0/0	./.	0/1	./.	1/1	1/1	1/1	1/1	./.	./.	0/1	0/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/1	0/1	0/0	0/0	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18226980	SNP-3.18225761.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18227370	SNP-3.18226151.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/1	0/1	0/1	0/1	./.	0/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	18229318	SNP-3.18228099.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18232933	SNP-3.18231714.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	1/1	./.	./.	1/1	./.	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	./.	./.	./.	./.	0/0	./.	0/0	1/1	./.	1/1	./.	./.	0/0	0/0	1/1	./.	0/0	./.	1/1	1/1	./.	1/1	./.	./.	1/1	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	18234891	SNP-3.18233672.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	./.	0/0	0/0	1/1	0/0	0/0	1/1	./.	./.	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	./.	1/1	0/0	./.	./.	./.	./.	0/0	./.	1/1	./.	0/0	./.	0/0	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	./.
+3	18235515	SNP-3.18234296.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	./.	0/1	0/1	0/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18235969	SNP-3.18234750.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	./.	1/1	./.	0/1	./.	0/0	0/0	./.	0/0	1/1	0/1	0/0	1/1	1/1	./.	./.	0/1	1/1	1/1	1/1	./.	./.	./.	./.	./.	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/1	0/1	1/1	./.	./.	./.	1/1	1/1	0/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/1	1/1	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	18250460	SNP-3.18249241.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.487-48C>A|678|LOC_Os03g31910|protein_coding|CODING|LOC_Os03g31910.1|2|1)	GT	./.	./.	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	./.	0/0	./.	1/1	./.	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	./.	0/0	./.	./.	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	./.	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	18251991	SNP-3.18250772.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.1800+99A>G|678|LOC_Os03g31910|protein_coding|CODING|LOC_Os03g31910.1|4|1)	GT	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	1/1	0/0	1/1	./.	./.	./.	1/1	0/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/1	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	./.	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1
+3	18252450	SNP-3.18251231.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.1801-540A>G|678|LOC_Os03g31910|protein_coding|CODING|LOC_Os03g31910.1|4|1)	GT	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	./.	./.	./.	./.	./.	0/0	0/0	1/1	./.	./.	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	0/0	./.	./.	0/0	./.	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	./.	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	./.	./.	0/0	./.	./.	./.	0/0	./.	./.	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1
+3	18255353	SNP-3.18254134.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	./.	./.	0/0	1/1	./.	1/1	0/0	0/0	1/1	0/1	1/1	0/1	./.	0/0	0/1	1/1	0/0	1/1	1/1	0/0	0/1	0/1	./.	1/1	1/1	./.	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	./.	0/0	0/0	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	./.	0/1	1/1	0/1	./.	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	./.	./.	0/0	./.	0/0	0/0
+3	18265320	SNP-3.18264101.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	./.	1/1	0/1	1/1	./.	0/0	0/0	0/1	./.	./.	0/1	0/0	0/0	0/1	./.	./.	./.	./.	1/1	1/1	./.	./.	./.	0/1	0/0	0/0	0/0	0/0	0/1	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	./.	1/1	0/1	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	1/1	1/1	1/1	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/0	./.	./.	0/0	./.	0/0	0/0	./.	1/1	0/1	./.	0/0	0/0	1/1	./.	0/1	0/0	1/1	./.	0/0	./.	./.	./.	./.	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	0/0	1/1	./.	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	./.	./.	./.	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	./.	./.	0/0	1/1
+3	18265555	SNP-3.18264336.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/1
+3	18265571	SNP-3.18264352.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cCg/cGg|p.Pro5Arg/c.14A>G|86|LOC_Os03g31934|protein_coding|CODING|LOC_Os03g31934.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	18266303	SNP-3.18265084.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	./.	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	18268430	SNP-3.18267211.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	./.	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	./.	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	./.	./.	1/1	1/1	./.	0/0	./.	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	18269402	SNP-3.18268183.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	./.	./.	1/1	1/1	0/0	./.	0/0	0/0	./.	0/1	0/1	0/0	0/1	./.	1/1	0/1	1/1	0/1	0/0	1/1	0/0	./.	0/1	0/1	0/0	0/0	./.	./.	./.	./.	0/1	0/1	./.	./.	0/0	./.	0/0	./.	0/0	./.	./.	./.	0/1	./.	0/1	0/1	0/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/1	./.	0/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	0/0	./.	./.	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	./.	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/1	0/0	1/1	./.	./.	0/0	1/1	./.	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	./.	1/1	./.	0/0	0/0	0/0	0/1	0/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	./.	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	0/0	1/1	0/0
+3	18270795	SNP-3.18269576.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	./.	0/0	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	0/0	./.	./.	1/1	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	./.	0/0
+3	18274457	SNP-3.18273238.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	./.	0/0	0/0	./.	1/1	0/0	./.	./.	./.	./.	0/0	0/0	1/1	./.	./.	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	0/0	1/1	./.	0/0	0/0	./.	0/0	1/1	1/1	./.	1/1	./.	./.	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	./.	1/1	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	./.	./.	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	./.	1/1	1/1	./.	./.	0/0	1/1	1/1	1/1	./.	./.	0/0	./.	./.	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	1/1	0/0	1/1	1/1	1/1	./.	0/0	./.	./.	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	1/1
+3	18277824	SNP-3.18276605.	C	A	.	.	PR;EFF=splice_region_variant(LOW|||c.160C>A|236|LOC_Os03g31940|protein_coding|CODING|LOC_Os03g31940.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW||Aac/Aac|p.Asn54Asn/c.160C>A|236|LOC_Os03g31940|protein_coding|CODING|LOC_Os03g31940.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/1	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/1	0/1	0/0	0/1	1/1	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/1	./.	0/0	0/0	0/1	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18278591	SNP-3.18277372.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cCt/cGt|p.Pro148Arg/c.443A>G|236|LOC_Os03g31940|protein_coding|CODING|LOC_Os03g31940.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	./.	0/1	0/1	0/1	./.	0/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1
+3	18278747	SNP-3.18277528.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gCt/gGt|p.Ala200Gly/c.599A>G|236|LOC_Os03g31940|protein_coding|CODING|LOC_Os03g31940.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	18279472	SNP-3.18278253.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|Agg/Cgg|p.Arg150Arg/c.448T>C|213|LOC_Os03g31944|protein_coding|CODING|LOC_Os03g31944.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	1/1	./.	./.	./.	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	./.	./.	./.	1/1	1/1	0/0	./.	./.	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	./.	1/1	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	./.	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1
+3	18281115	SNP-3.18279896.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.432+241C>A|175|LOC_Os03g31950|protein_coding|CODING|LOC_Os03g31950.1|1|1)	GT	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/1	0/0	./.	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	0/0	./.	1/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	0/0	./.	0/1	1/1	./.	0/0	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18283201	SNP-3.18281982.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	./.	0/0	./.	./.	1/1	1/1	0/0	0/0	0/1	0/0	1/1	0/1	1/1	./.	0/1	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/1	0/1	0/0	0/0	./.	0/1	0/1	0/0	0/0	0/0	0/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/1	./.	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/1	0/1	0/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	0/1	./.	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	./.	./.	0/0	0/0	./.	./.	0/0	./.	./.	0/0	./.	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0
+3	18284753	SNP-3.18283534.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Cag/Gag|p.Gln9Glu/c.25A>G|87|LOC_Os03g31970|protein_coding|CODING|LOC_Os03g31970.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/1	0/0	0/1	0/0	1/1	0/0	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/1	0/0	1/1	1/1	0/0	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/0	1/1	0/1	1/1	0/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	1/1	0/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	18286194	SNP-3.18284975.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	0/1	1/1	./.	./.	0/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	./.	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1
+3	18289270	SNP-3.18288051.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	./.	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18289941	SNP-3.18288722.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	./.	0/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	1/1	./.	0/0	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/1	1/1	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1
+3	18291412	SNP-3.18290193.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/1	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	./.	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	0/1	1/1	./.	1/1	./.	1/1	1/1	./.	0/1	0/0	1/1	./.	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	0/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	./.	./.	0/0	0/0	./.	1/1	0/0	0/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	./.	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	18292401	SNP-3.18291182.	C	A	.	.	PR;EFF=synonymous_variant(LOW||caA/caA|p.Gln254Gln/c.762C>A|1317|LOC_Os03g31986|protein_coding|CODING|LOC_Os03g31986.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	./.	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	1/1	./.	0/0	./.	0/0	./.	./.	1/1	1/1	./.	1/1	1/1	./.	0/0	./.	./.	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	1/1	1/1	./.	1/1	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	./.	./.	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	./.	1/1	./.	./.	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.
+3	18299589	SNP-3.18298370.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.36-166C>A|182|LOC_Os03g31992|protein_coding|CODING|LOC_Os03g31992.1|1|1)	GT	0/0	1/1	./.	1/1	./.	0/0	0/0	1/1	1/1	./.	./.	0/1	./.	0/1	0/0	1/1	0/1	./.	0/1	./.	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	0/0	./.	1/1	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18299632	SNP-3.18298413.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.36-123A>G|182|LOC_Os03g31992|protein_coding|CODING|LOC_Os03g31992.1|1|1)	GT	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	18299669	SNP-3.18298450.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.36-86A>G|182|LOC_Os03g31992|protein_coding|CODING|LOC_Os03g31992.1|1|1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	./.	1/1	./.	./.	0/0	./.	./.	./.	./.	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	1/1	0/1	./.	1/1	./.	0/1	./.	1/1	0/1	./.	1/1	./.	0/0	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	./.	0/0	0/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/1	0/0	./.	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	./.	1/1	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/1	0/1	0/1	./.	1/1	0/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	./.	0/0	./.	0/0	./.	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	./.	1/1	0/0	0/0	./.	0/0	1/1	0/0	./.	./.	1/1	./.	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1
+3	18300383	SNP-3.18299164.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	0/1	0/1	./.	./.	0/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	0/0	1/1	./.	1/1	0/1	1/1	0/0	./.	0/0	0/1	0/0	1/1	./.	0/1	0/0	0/0	0/1	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/1	0/0
+3	18301062	SNP-3.18299843.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	1/1	0/0	1/1	0/1	0/0	0/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/1	1/1	1/1	1/1	./.	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	./.	0/0	0/1	0/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18305619	SNP-3.18304400.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	0/0	1/1	./.	0/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/1	0/0	0/1	0/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	1/1	0/0	0/1	0/0	1/1	1/1	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1
+3	18310618	SNP-3.18309399.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	./.	0/0	0/0	1/1	1/1	0/0	0/1	0/1	0/0	0/1	0/0	1/1	0/1	0/0	0/1	0/1	0/0	0/1	0/1	./.	0/0	0/0	0/0	0/0	./.	0/1	0/0	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	0/1	0/0	0/1	0/0	./.	0/0	0/0	0/1	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	0/1	0/1	./.	0/0	1/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/1	0/0	0/1	0/0	./.	0/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	18310792	SNP-3.18309573.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	./.	1/1	./.	1/1	0/0	1/1	1/1	0/0	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	./.	./.	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	./.	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	./.	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	1/1	0/0	./.	1/1	1/1	./.	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	./.	1/1	1/1	0/0	1/1
+3	18318196	SNP-3.18316977.	C	A	.	.	PR;EFF=synonymous_variant(LOW||ttT/ttT|p.Phe60Phe/c.180G>T|90|LOC_Os03g32020|protein_coding|CODING|LOC_Os03g32020.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18318613	SNP-3.18317394.	A	G	.	.	PR;EFF=synonymous_variant(LOW||cCt/cCt|p.Pro9Pro/c.26T>C|90|LOC_Os03g32020|protein_coding|CODING|LOC_Os03g32020.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	./.	1/1	0/0	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	./.	1/1	1/1	./.	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	./.	0/0	0/0	./.	./.	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	./.	./.	1/1	./.	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	./.	0/0	./.	1/1	./.	./.	0/0	./.	./.	./.	0/0	./.	1/1	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0
+3	18318628	SNP-3.18317409.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|tCt/tTt|p.Ser4Phe/c.11G>T|90|LOC_Os03g32020|protein_coding|CODING|LOC_Os03g32020.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18319097	SNP-3.18317878.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cCg/cAg|p.Pro53Gln/c.158C>A|175|LOC_Os03g32030|protein_coding|CODING|LOC_Os03g32030.1|1|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	18319439	SNP-3.18318220.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aCc/aGc|p.Thr167Ser/c.500A>G|175|LOC_Os03g32030|protein_coding|CODING|LOC_Os03g32030.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	0/0	0/0	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/1	0/0	0/0	1/1	./.	./.	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/1	0/0	0/0	0/0	0/1	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	1/1	./.	1/1	./.	./.	./.	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1
+3	18328011	SNP-3.18326792.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.617-2174T>C|335|LOC_Os03g32050|protein_coding|CODING|LOC_Os03g32050.1|3|1)	GT	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	0/1	0/1	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/1	./.	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	./.	0/0	./.	1/1	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1
+3	18333137	SNP-3.18331918.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/1	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0
+3	18341760	SNP-3.18340541.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.819+562A>G|575|LOC_Os03g32070|protein_coding|CODING|LOC_Os03g32070.1|3|1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/1	0/1	1/1	0/0	0/1	1/1	0/1	1/1	1/1	0/1	0/1	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	1/1	1/1	0/0	./.	1/1	0/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1
+3	18347733	SNP-3.18346514.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0
+3	18364447	SNP-3.18363228.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	./.	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	./.	0/0	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	0/0	1/1	./.	./.	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	./.	./.	0/0	0/0	1/1	./.	./.	0/0	./.	0/0	./.	1/1	./.	0/0	./.	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	./.	./.	./.	1/1	1/1	0/0	1/1	./.	0/0	./.	1/1	./.	1/1	./.	1/1	0/0	./.	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	./.	0/0	1/1	1/1	1/1	./.	0/0	./.	./.	0/0	./.	0/0	1/1	1/1	./.	1/1	./.	./.	0/0	./.	1/1	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	1/1	./.	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	./.	1/1	1/1	0/0	./.
+3	18372495	SNP-3.18371276.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18372682	SNP-3.18371463.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	18373365	SNP-3.18372146.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/1	./.	0/0	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/1	1/1	0/1	./.	./.	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	./.	./.	1/1	0/1	1/1	1/1	./.	./.	1/1	0/0	./.	0/0	0/0	1/1	./.	./.	0/0	0/0	0/1	0/0	./.	1/1	1/1	./.	./.	./.	0/0	0/0	1/1	./.	./.	0/1	0/1	./.	0/1	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	./.	./.	0/0	1/1	0/0
+3	18390010	SNP-3.18388791.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/1	0/0	0/1	./.	0/0	0/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/1	./.	0/1	1/1	./.	1/1	./.	./.	1/1	0/1	./.	0/0	0/0	./.	0/1	0/1	0/0	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	1/1	0/1	0/0	./.	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	./.	1/1	./.	0/0	0/0
+3	18407077	SNP-3.18405858.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	./.	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	1/1	0/0	./.	1/1	1/1	0/0	1/1	0/0	./.	0/0	./.	1/1	./.	0/0	0/0	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	./.	./.	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0
+3	18407351	SNP-3.18406132.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/1	1/1	0/0	0/1	./.	1/1	1/1	1/1	0/0	0/0	./.	0/0	./.	1/1	0/1	./.	0/0	0/1	./.	./.	0/0	1/1	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/1	0/1	0/0	./.	0/1	0/0	0/0	0/1	./.	0/0	0/1	0/1	./.	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/1	./.	0/0	0/0	0/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/0	0/1	0/0	0/0	0/0	0/1	./.	0/0	0/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	1/1	./.	0/0	./.	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/1	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0
+3	18408572	SNP-3.18407353.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aGa/aTa|p.Arg190Ile/c.569G>T|240|LOC_Os03g32190|protein_coding|CODING|LOC_Os03g32190.1|2|1)	GT	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/1	0/0	./.	0/1	0/0	0/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	./.	./.	0/1	0/0	0/1	./.	0/1	0/0	0/0	0/0	./.	0/0	0/1	0/0	./.	0/0	0/0	0/1	0/0	0/1	0/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/1	0/0	1/1	0/0
+3	18408752	SNP-3.18407533.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gCt/gTt|p.Ala130Val/c.389G>T|240|LOC_Os03g32190|protein_coding|CODING|LOC_Os03g32190.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	./.	0/0	0/0	1/1	0/1	0/0	0/0	0/0	./.	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	./.	./.	0/1	./.	./.	0/1	0/1	./.	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	./.	0/0	./.	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	./.	./.	./.	0/1	0/1	0/0	./.	1/1	0/0	./.	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	./.	0/1	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/1	0/0	1/1	0/0
+3	18409058	SNP-3.18407839.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cGc/cTc|p.Arg28Leu/c.83G>T|240|LOC_Os03g32190|protein_coding|CODING|LOC_Os03g32190.1|2|1)	GT	0/0	1/1	0/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	1/1	./.	./.	0/0	0/1	./.	0/0	0/0	1/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/1	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	./.	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	1/1	0/1	0/0	./.	1/1	0/0	./.	./.	./.	1/1	0/0	0/0	1/1	0/0	1/1	./.	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/1	1/1	0/0	./.	1/1	0/0
+3	18409330	SNP-3.18408111.	A	G	.	.	PR;EFF=5_prime_UTR_premature_start_codon_gain_variant(LOW||||240|LOC_Os03g32190|protein_coding|CODING|LOC_Os03g32190.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),5_prime_UTR_variant(MODIFIER||190|c.-104T>C|240|LOC_Os03g32190|protein_coding|CODING|LOC_Os03g32190.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	0/0	1/1	./.	0/0	./.	0/0	1/1	./.	1/1	1/1	0/0	0/0	./.	0/0	1/1	./.	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	0/0	./.	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	1/1	./.	0/0	0/0	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	./.	1/1	./.	0/0	./.	1/1	./.	0/0	./.	./.	0/0	./.	./.	0/0	1/1	./.	1/1	./.	./.	./.	0/0	1/1	1/1	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	./.	./.	./.	./.	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.
+3	18409331	SNP-3.18408112.	A	G	.	.	PR;EFF=5_prime_UTR_variant(MODIFIER||191|c.-105T>C|240|LOC_Os03g32190|protein_coding|CODING|LOC_Os03g32190.1|1|1)	GT	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0
+3	18409522	SNP-3.18408303.	C	A	.	.	PR;EFF=5_prime_UTR_premature_start_codon_gain_variant(LOW||||240|LOC_Os03g32190|protein_coding|CODING|LOC_Os03g32190.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),5_prime_UTR_variant(MODIFIER||382|c.-296G>T|240|LOC_Os03g32190|protein_coding|CODING|LOC_Os03g32190.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/1	0/1	./.	./.	0/0	0/0	0/1	./.	./.	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	0/1	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	1/1	0/0	0/0	0/1	0/0	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	./.	./.	./.	./.	0/0	./.	./.	./.	./.	./.	0/0	0/0	./.	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	./.
+3	18410408	SNP-3.18409189.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Ttc/Atc|p.Phe116Ile/c.346C>A|273|LOC_Os03g32180|protein_coding|CODING|LOC_Os03g32180.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),5_prime_UTR_premature_start_codon_gain_variant(LOW||||240|LOC_Os03g32190|protein_coding|CODING|LOC_Os03g32190.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),5_prime_UTR_variant(MODIFIER||1268|c.-1182G>T|240|LOC_Os03g32190|protein_coding|CODING|LOC_Os03g32190.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	./.	./.	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/0	./.	0/0	0/0	./.	./.	./.	1/1	1/1	1/1	./.	0/0	./.	./.	0/0	1/1	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0
+3	18435790	SNP-3.18434571.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	1/1	0/0	./.	0/0	0/0	0/0	./.	1/1	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18438070	SNP-3.18436851.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18438144	SNP-3.18436925.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	18439247	SNP-3.18438028.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	./.	1/1	1/1	0/0	1/1	./.	1/1	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	18442144	SNP-3.18440925.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	1/1	0/0	1/1	0/1	0/1	0/1	0/0	./.	./.	0/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0
+3	18442726	SNP-3.18441507.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	./.	0/0	./.	0/1	0/0	0/0	0/0	./.	0/0	0/1	./.	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	1/1	0/0	1/1	1/1	0/1	0/0
+3	18443068	SNP-3.18441849.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	./.	./.	./.	0/0	1/1	0/0	./.	./.	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	./.	0/0	./.	1/1	./.	1/1	1/1	1/1	0/0	0/0	./.	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	./.	./.	0/0	./.	0/0	0/0	./.	0/0	./.	1/1	./.	1/1	0/0	0/0	0/0	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.
+3	18443765	SNP-3.18442546.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/0	1/1	0/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	./.	0/1	0/1	./.	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0
+3	18444167	SNP-3.18442948.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18444805	SNP-3.18443586.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.252-37C>A|170|LOC_Os03g32250|protein_coding|CODING|LOC_Os03g32250.1|1|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/1	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	./.	1/1	0/0
+3	18458739	SNP-3.18457520.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0
+3	18462480	SNP-3.18461261.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	18463409	SNP-3.18462190.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	1/1	0/0	./.	1/1	1/1	./.	0/0	0/0	0/1	1/1	0/0	./.	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/1	./.	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0
+3	18463744	SNP-3.18462525.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	./.	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	1/1	0/0	0/1	./.	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	./.	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1
+3	18467139	SNP-3.18465920.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	./.	0/0	./.	0/0	1/1	1/1	0/1	1/1	./.	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0
+3	18467606	SNP-3.18466387.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18475869	SNP-3.18474650.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	18480186	SNP-3.18478967.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/1	0/0	./.	0/0	./.	0/0	./.	0/0	0/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/1	./.	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	0/1	./.	1/1	./.	1/1	0/0	./.	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	1/1	0/0	./.	0/1	./.	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/0	1/1	./.	0/0	./.	0/0	0/0	./.	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	1/1	0/0
+3	18481758	SNP-3.18480539.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	./.	./.	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0
+3	18483130	SNP-3.18481911.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Cat/Gat|p.His20Asp/c.58A>G|124|LOC_Os03g32302|protein_coding|CODING|LOC_Os03g32302.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	./.	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	./.	./.	1/1	0/0	1/1	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1
+3	18484788	SNP-3.18483569.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/1	0/0	0/1	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	./.	./.	0/1	0/0	1/1	./.	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/1	./.	./.	./.	0/1	1/1	./.	./.	./.	1/1	1/1	1/1	0/1	1/1	0/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/1	1/1	1/1	./.	1/1
+3	18490760	SNP-3.18489541.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	0/1	1/1	0/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/1	0/0	0/1	1/1	0/0
+3	18493244	SNP-3.18492025.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	1/1	./.	./.	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/1	0/0	./.	./.	./.	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	0/0	./.	./.	0/1	./.	./.	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/1	./.	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18494873	SNP-3.18493654.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	1/1
+3	18495638	SNP-3.18494419.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	./.	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	./.	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	18496206	SNP-3.18494987.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cCg/cGg|p.Pro30Arg/c.89A>G|124|LOC_Os03g32330|protein_coding|CODING|LOC_Os03g32330.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	./.	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	./.	./.	./.	0/0	./.	1/1	1/1	1/1	0/0	1/1	./.	./.	1/1	0/0	./.	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	./.	0/0	1/1	./.	./.	1/1	./.	0/0	1/1	0/0	1/1	./.	./.	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	./.	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1
+3	18496335	SNP-3.18495116.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cGa/cAa|p.Arg73Gln/c.218C>A|124|LOC_Os03g32330|protein_coding|CODING|LOC_Os03g32330.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0
+3	18501666	SNP-3.18500447.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	0/0	./.	1/1	0/0	1/1	./.	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	0/0	./.	1/1	1/1	0/0	./.	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1
+3	18501950	SNP-3.18500731.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	./.	./.	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	1/1	0/0	1/1	1/1	./.	1/1	./.	./.	1/1	0/0	0/0	./.	./.	0/0	./.	./.	1/1	./.	0/0	./.	0/0	1/1	./.	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	0/0	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	./.	0/0
+3	18503660	SNP-3.18502441.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	18503942	SNP-3.18502723.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	./.	0/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	18513093	SNP-3.18511874.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Gtc/Atc|p.Val308Ile/c.922C>A|403|LOC_Os03g32360|protein_coding|CODING|LOC_Os03g32360.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	./.	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	./.	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.
+3	18521763	SNP-3.18520544.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|aaG/aaA|p.Lys296Lys/c.888C>A|934|LOC_Os03g32380|protein_coding|CODING|LOC_Os03g32380.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	0/0	1/1	./.	1/1	./.	1/1	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	0/0	./.	0/0	0/0	1/1	0/0
+3	18524055	SNP-3.18522836.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	./.	./.	./.	1/1	1/1	1/1	0/0	./.	./.	./.	./.	1/1	./.	./.	./.	1/1	0/0	0/0	./.	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	./.	./.	0/0	./.	./.	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	./.	./.	./.	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	./.	0/0	1/1	./.	1/1	0/0	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	./.	0/0	./.	0/0	./.	0/0	1/1	./.	./.	1/1	./.	1/1	0/0	./.	1/1	./.	./.	./.	./.	./.	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	./.	./.	./.	1/1	0/0	1/1	1/1	0/0	./.	1/1	./.	1/1	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	./.	0/0
+3	18529021	SNP-3.18527802.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gGa/gAa|p.Gly57Glu/c.170C>A|182|LOC_Os03g32390|protein_coding|CODING|LOC_Os03g32390.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	./.	./.	./.	0/0	1/1	0/0	0/0	1/1	0/0	./.	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	./.	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0
+3	18530324	SNP-3.18529105.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	./.	1/1	0/0	0/1	./.	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	18530788	SNP-3.18529569.	C	A	.	.	PR;EFF=start_lost(HIGH|MISSENSE|aTg/aAg|p.Met1?/c.2C>A|146|LOC_Os03g32400|protein_coding|CODING|LOC_Os03g32400.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME);LOF=(LOC_Os03g32400|LOC_Os03g32400|1|1.00)	GT	0/0	1/1	0/0	1/1	./.	0/0	0/0	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/1	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0
+3	18531959	SNP-3.18530740.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	18533769	SNP-3.18532550.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	18535113	SNP-3.18533894.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	1/1	0/0	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/1	./.	0/0	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	./.	0/0	./.	0/0	0/0	./.	0/0
+3	18535365	SNP-3.18534146.	C	A	.	.	PR;EFF=synonymous_variant(LOW||aAg/aAg|p.Lys3Lys/c.8C>A|108|LOC_Os03g32410|protein_coding|CODING|LOC_Os03g32410.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18542604	SNP-3.18541385.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/1	0/0	1/1	0/0	0/0	0/0	./.	0/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	./.	0/1	./.	./.	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	1/1	0/1	1/1	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/1	1/1	0/0	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	1/1	./.	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18543348	SNP-3.18542129.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	0/1	./.	0/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/1	./.	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	18544639	SNP-3.18543420.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.68-298C>A|77|LOC_Os03g32430|protein_coding|CODING|LOC_Os03g32430.1|1|1)	GT	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18545523	SNP-3.18544304.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/1	0/1	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18548077	SNP-3.18546858.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18548882	SNP-3.18547663.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/1	0/0	./.	./.	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/1	./.	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/1	./.	0/0	0/1	0/0	0/0	./.	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/1	1/1	./.	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/1	0/1	0/1	0/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/1	./.	0/1	./.	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	18549767	SNP-3.18548548.	C	A	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||359|c.*359G>T|321|LOC_Os03g32440|protein_coding|CODING|LOC_Os03g32440.1|3|1)	GT	./.	1/1	1/1	1/1	./.	0/0	./.	1/1	1/1	1/1	0/1	./.	0/1	0/0	0/0	1/1	0/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/1	0/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	./.	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0	0/1	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	1/1	0/0	./.	./.	0/1	1/1	0/0	0/0	./.	./.	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	./.	0/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	0/1	0/0	0/0	0/0	./.	0/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	0/1	1/1	./.	0/0	0/1	./.	./.	0/0	0/0	1/1	0/0	./.	1/1	0/1	0/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0
+3	18550008	SNP-3.18548789.	A	G	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||118|c.*118T>C|321|LOC_Os03g32440|protein_coding|CODING|LOC_Os03g32440.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	./.	1/1	1/1	0/1	0/0	./.	0/0	1/1	1/1	./.	0/1	./.	./.	1/1	1/1	0/0	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/1	1/1	./.	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	1/1	0/1	0/1	./.	1/1	1/1	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	./.	1/1	1/1	0/0	./.	./.	1/1	1/1	0/0	1/1	0/0	./.	./.	./.	1/1	./.	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/1	0/1	0/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	./.	0/0	./.
+3	18550225	SNP-3.18549006.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|caA/caT|p.Gln289His/c.867G>T|321|LOC_Os03g32440|protein_coding|CODING|LOC_Os03g32440.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	./.	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	./.	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	18552549	SNP-3.18551330.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	./.	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	./.	1/1	./.	1/1	1/1	./.	0/0	1/1	./.	./.	./.	./.	./.	./.	./.	1/1	1/1	1/1	1/1	./.	./.	0/0	./.	0/0	./.	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	1/1	./.	./.	0/0	0/0	1/1	1/1	0/0	1/1	./.	./.	1/1	1/1	0/0	./.	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0
+3	18555016	SNP-3.18553797.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	1/1	0/0	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	1/1	0/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	./.	1/1	0/1	1/1	1/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	./.	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	18555796	SNP-3.18554577.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|gtC/gtT|p.Val57Val/c.171G>T|152|LOC_Os03g32450|protein_coding|CODING|LOC_Os03g32450.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/1	1/1	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	./.	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	18556230	SNP-3.18555011.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	./.	./.	1/1	0/0	./.	1/1	0/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/1	1/1	./.	./.	./.	./.	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0
+3	18558573	SNP-3.18557354.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	1/1	0/0	./.	0/0	./.	1/1	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	./.	1/1	0/0
+3	18558627	SNP-3.18557408.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	./.	0/1	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	1/1	0/0	1/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	0/0	./.	0/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0
+3	18559120	SNP-3.18557901.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	./.	./.	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0
+3	18559268	SNP-3.18558049.	C	A	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||541|c.*541G>T|401|LOC_Os03g32460|protein_coding|CODING|LOC_Os03g32460.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/1	0/1	0/0	1/1	0/0	0/0	0/0	0/1	0/1	0/0	0/1	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	0/1	0/1	0/1	1/1	0/1	0/1	0/1	1/1	1/1	0/1	0/1	1/1	./.	0/0	./.	0/0	./.	0/1	0/1	0/0	0/0	0/0	0/1	0/0	0/1	./.	./.	0/0	0/0	1/1	./.	0/0	0/0	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/1	./.	./.	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	1/1	1/1	0/1	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/1	0/1	./.	1/1	./.	0/1	./.	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0
+3	18561310	SNP-3.18560091.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.20-104G>T|401|LOC_Os03g32460|protein_coding|CODING|LOC_Os03g32460.1|1|1)	GT	0/0	1/1	0/1	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	1/1	0/0
+3	18561974	SNP-3.18560755.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	0/1	0/0	./.	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	./.	0/1	0/0	0/0	0/0	./.	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/1	./.	./.	0/0	0/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18564453	SNP-3.18563234.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	./.	0/0	0/0	1/1	1/1	1/1	./.	./.	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/1	0/1	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	./.	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/1	1/1	0/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	./.	0/1	0/0	0/1	0/0	0/0	./.	./.	0/1	1/1	./.	0/0	1/1	0/0	1/1	./.	0/0	1/1	0/0	./.	./.	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/1	0/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	./.	0/0	1/1	0/0
+3	18564499	SNP-3.18563280.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	./.	0/1	./.	0/1	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/1	1/1	1/1	0/0	0/1	0/0	0/1	0/0	1/1	1/1	./.	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18568709	SNP-3.18567490.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	0/0	1/1	./.	./.	./.	1/1	1/1	0/0	0/0	./.	./.	./.	./.	1/1	./.	0/0	1/1	./.	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	./.	./.	0/0	0/0	./.	1/1	./.	0/0	0/0	./.	./.	./.	./.	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	./.	1/1	0/0
+3	18574317	SNP-3.18573098.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cGg/cAg|p.Arg394Gln/c.1181C>A|701|LOC_Os03g32480|protein_coding|CODING|LOC_Os03g32480.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18574632	SNP-3.18573413.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aTa/aAa|p.Ile499Lys/c.1496C>A|701|LOC_Os03g32480|protein_coding|CODING|LOC_Os03g32480.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	0/1	0/1	./.	./.	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	./.	0/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	18574749	SNP-3.18573530.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gTt/gGt|p.Val538Gly/c.1613A>G|701|LOC_Os03g32480|protein_coding|CODING|LOC_Os03g32480.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	./.	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	./.	./.	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	1/1	./.	0/0	./.	./.	1/1	./.	./.	0/0	./.	0/0	./.	0/0	./.	0/0	./.	./.	1/1	0/0	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	./.	./.	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	./.	0/0	./.	1/1	./.	0/0	1/1	0/0	0/0	./.	0/0	./.	./.	0/0	1/1	./.	1/1	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	1/1	./.	0/0	./.	0/0	./.	./.	0/0	0/0	./.	./.	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	./.	0/0	./.	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1
+3	18575195	SNP-3.18573976.	A	G	.	.	PR;EFF=synonymous_variant(LOW||gtG/gtG|p.Val660Val/c.1980A>G|701|LOC_Os03g32480|protein_coding|CODING|LOC_Os03g32480.1|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	18578550	SNP-3.18577331.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/1	1/1	0/0	0/0	0/1	0/0	./.	./.	./.	./.	./.	0/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/1	./.	0/1	1/1	0/1	./.	./.	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/1	0/0	1/1	1/1	./.	0/1	0/1	0/0	1/1	./.	0/0	./.	0/0	1/1	0/1	1/1	1/1	./.	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	1/1	0/1	./.	0/0	./.	./.	0/1	0/0	0/1	0/1	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/1	0/0	./.	0/1	0/1	1/1	1/1	0/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	0/0	0/0	0/0	1/1	./.	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1
+3	18578564	SNP-3.18577345.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	1/1	./.	1/1	./.	0/0	./.	1/1	0/0	0/0	./.	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	1/1	./.	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	./.	0/0	1/1	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	./.	./.	./.	./.	./.	0/0	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	./.	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	1/1	0/0	./.	0/0	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.
+3	18578743	SNP-3.18577524.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	1/1	0/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/1	1/1	0/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	./.	0/0	./.	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/1	0/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	./.	1/1	0/0	1/1
+3	18580725	SNP-3.18579506.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.114+619C>A|90|LOC_Os03g32499|protein_coding|CODING|LOC_Os03g32499.1|2|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/1	1/1	0/0	0/1	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	./.	0/0	0/1	./.	0/1	0/0	0/1	0/1	0/0	0/1	0/1	0/0	./.	0/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	./.	0/0
+3	18615582	SNP-3.18614363.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	1/1	./.	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	1/1	./.	./.	1/1	1/1	./.	./.	./.	0/0	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	./.	./.	0/0	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	./.	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/1	0/0	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1
+3	18617626	SNP-3.18616407.	C	A	.	.	PR;EFF=synonymous_variant(LOW||cAc/cAc|p.His558His/c.1673C>A|658|LOC_Os03g32550|protein_coding|CODING|LOC_Os03g32550.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	./.	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	./.	0/0	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0
+3	18617856	SNP-3.18616637.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Tgc/Agc|p.Cys635Ser/c.1903C>A|658|LOC_Os03g32550|protein_coding|CODING|LOC_Os03g32550.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	1/1	./.	0/0	./.	1/1	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	./.	./.	1/1	./.	0/0	1/1	0/0	0/0	./.	./.	0/0	1/1	0/0	./.	1/1	0/0	1/1	1/1	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	./.	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	1/1	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0
+3	18618966	SNP-3.18617747.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.1804-14G>T|746|LOC_Os03g32560|protein_coding|CODING|LOC_Os03g32560.1|4|1)	GT	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	./.	0/0	./.	./.	1/1	./.	0/1	0/1	1/1	1/1	./.	1/1	./.	0/1	0/1	0/0	./.	0/0	1/1	./.	./.	0/0	1/1	0/0	0/1	0/1	1/1	0/0	0/1	0/0	0/0	./.	./.	0/0	1/1	1/1	0/1	1/1	1/1	0/1	0/1	0/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	./.	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18618983	SNP-3.18617764.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.1804-31T>C|746|LOC_Os03g32560|protein_coding|CODING|LOC_Os03g32560.1|4|1)	GT	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/1	0/1	0/1	0/0	./.	0/1	0/0	./.	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/1	./.	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	./.	0/1	0/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	18620936	SNP-3.18619717.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.283+42T>C|746|LOC_Os03g32560|protein_coding|CODING|LOC_Os03g32560.1|2|1)	GT	./.	0/0	./.	0/0	1/1	0/0	./.	./.	0/0	./.	./.	1/1	0/0	1/1	1/1	0/0	./.	./.	./.	./.	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	0/0	0/0	0/0	./.	./.	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	./.	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	./.	./.	1/1	./.	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0
+3	18621127	SNP-3.18619908.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gTt/gCt|p.Val45Ala/c.134T>C|746|LOC_Os03g32560|protein_coding|CODING|LOC_Os03g32560.1|2|1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	./.	1/1	./.	0/0	./.	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	./.	./.	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	./.	./.	./.	0/0	1/1	1/1	0/0	./.	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	1/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	./.	./.	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	./.	0/0	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0
+3	18622401	SNP-3.18621182.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	./.	1/1	0/0	./.	0/1	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/1	0/1	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	0/1	1/1	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/1	1/1	0/0
+3	18623735	SNP-3.18622516.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	./.	./.	./.	0/0	./.	./.	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	./.	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1
+3	18625404	SNP-3.18624185.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/1	./.	1/1	./.	1/1	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	18625780	SNP-3.18624561.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/1	0/0	1/1	./.	0/0	./.	./.	0/1	1/1	./.	./.	0/1	0/1	0/1	1/1	0/1	1/1	1/1	0/1	1/1	./.	0/1	0/1	1/1	1/1	0/0	1/1	0/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/0	./.	0/1	./.	0/0	1/1	0/0	1/1	1/1	./.	./.	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	1/1	./.	0/1	1/1	1/1	0/1	0/0	0/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	0/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1
+3	18625896	SNP-3.18624677.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	18626554	SNP-3.18625335.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	./.	./.	0/0	./.	./.	./.	./.	./.	./.	./.	1/1	./.	0/1	./.	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	./.	0/0	./.	./.	./.	0/0	./.	0/0	./.	./.	0/0	./.	1/1	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	./.	0/0
+3	18627874	SNP-3.18626655.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	./.	./.	./.	1/1	./.	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	./.	1/1	1/1	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	./.	0/0	0/0	./.	./.	./.	./.	0/0	0/0	./.	./.	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	./.	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18628603	SNP-3.18627384.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/1	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/1	0/0	0/1	0/1	0/0	./.	1/1	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/1	./.	1/1	0/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	./.	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	./.	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/1	./.	./.	0/0	0/0	0/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	0/1	0/0	0/1	1/1	0/0
+3	18629060	SNP-3.18627841.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	./.	./.	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	./.	./.	./.	1/1	1/1	./.	./.	./.	./.	1/1	./.	1/1	1/1	0/0	0/0	1/1	./.	0/0	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0
+3	18632563	SNP-3.18631344.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	./.	1/1	0/0	0/0	./.	./.	1/1	1/1	./.	./.	./.	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/1	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	1/1	0/0
+3	18634358	SNP-3.18633139.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	./.	1/1	./.	1/1	./.	0/0	./.	0/0	./.	1/1	1/1	./.	./.	1/1	./.	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	./.	./.	1/1	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	./.	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	./.	1/1	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0
+3	18640611	SNP-3.18639392.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.1745-28G>T|819|LOC_Os03g32590|protein_coding|CODING|LOC_Os03g32590.1|9|1),intron_variant(MODIFIER|||c.1745-28G>T|685|LOC_Os03g32590|protein_coding|CODING|LOC_Os03g32590.2|9|1)	GT	0/0	1/1	0/0	1/1	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	18645295	SNP-3.18644076.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.167-904T>C|819|LOC_Os03g32590|protein_coding|CODING|LOC_Os03g32590.1|2|1),intron_variant(MODIFIER|||c.167-904T>C|685|LOC_Os03g32590|protein_coding|CODING|LOC_Os03g32590.2|2|1)	GT	0/0	0/0	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/1	0/1	0/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/1	1/1	1/1	./.	./.	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/1	1/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0
+3	18648463	SNP-3.18647244.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	./.	0/0	1/1	./.	1/1	1/1	./.	0/0	./.	./.	0/0	./.	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	0/0	1/1	1/1	./.	./.	0/0	./.	1/1	1/1	./.	0/0	./.	./.	1/1	./.	1/1	0/0	./.	./.	./.	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	./.	./.	./.	0/0	1/1	./.	0/0	0/0	0/0	1/1	1/1	0/0	./.	./.	./.	1/1	./.	./.	./.	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1
+3	18649030	SNP-3.18647811.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	0/0	1/1	1/1	1/1	1/1	./.	0/0	./.	1/1	./.	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	./.	1/1	0/0	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	./.	0/0	0/0	0/0	./.	1/1	0/0
+3	18655483	SNP-3.18654264.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.2422+370G>T|1183|LOC_Os03g32600|protein_coding|CODING|LOC_Os03g32600.1|5|1)	GT	0/0	1/1	./.	1/1	0/0	0/0	./.	0/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	./.	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	./.	0/1	0/0	./.	0/0	./.	0/0	0/0	1/1	./.	./.	1/1	./.	1/1	0/0	1/1	1/1	0/0	0/1	./.	./.	1/1	0/0	0/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	0/0	0/0	1/1	0/0
+3	18655739	SNP-3.18654520.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.2422+114T>C|1183|LOC_Os03g32600|protein_coding|CODING|LOC_Os03g32600.1|5|1)	GT	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	./.	./.	./.	./.	0/0	./.	0/0	./.	./.	1/1	0/0	1/1	./.	./.	./.	./.	./.	0/0	./.	1/1	0/0	./.	0/0	./.	./.	1/1	0/0	./.	0/0	./.	1/1	0/0	1/1	1/1	1/1	./.	./.	1/1	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	1/1	./.	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	./.	0/0	1/1	0/0	0/0	1/1	./.	./.	1/1	1/1	./.	0/0	0/0	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	./.	0/0	1/1	1/1	0/0	1/1	./.	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.
+3	18658396	SNP-3.18657177.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.1675-75T>C|1183|LOC_Os03g32600|protein_coding|CODING|LOC_Os03g32600.1|2|1)	GT	./.	./.	./.	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0	./.	./.	0/0	1/1	./.	./.	1/1	0/0	1/1	0/1	./.	1/1	./.	./.	./.	./.	1/1	0/0	./.	1/1	1/1	./.	./.	0/0	./.	./.	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/1	1/1	./.	0/0	0/0	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	1/1	./.	0/0	./.	./.	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	./.	1/1	0/0	./.	./.	1/1	0/1	./.	1/1	0/0	0/0	0/0	0/1	1/1	0/1	0/0	1/1	0/0	1/1	0/1	0/0	0/1	1/1	1/1	./.	./.	0/0	0/0	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	./.	./.	1/1
+3	18659416	SNP-3.18658197.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.899+6T>C|1183|LOC_Os03g32600|protein_coding|CODING|LOC_Os03g32600.1|1|1)	GT	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	./.	0/0	1/1	1/1	0/0	1/1	./.	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/0	./.	1/1	./.	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0
+3	18662162	SNP-3.18660943.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	./.	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18662402	SNP-3.18661183.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	1/1	./.	./.	./.	1/1	./.	./.	1/1	./.	./.	./.	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	1/1	./.	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	./.	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	./.	0/0	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	0/0	./.
+3	18664428	SNP-3.18663209.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	1/1	1/1	./.	./.	./.	1/1	0/0	0/0	1/1	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	0/0	1/1	./.	./.	1/1	0/0	./.	1/1	./.	0/0	0/0	1/1	./.	./.	0/0	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/0	1/1	0/0	./.	1/1	./.	./.	./.	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	1/1	./.	0/0	./.	0/0	0/0	./.	1/1	./.	1/1	0/0	1/1	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	0/0	1/1	./.	1/1	1/1	1/1	0/0	./.	0/0	0/0	./.	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.
+3	18667112	SNP-3.18665893.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	18667892	SNP-3.18666673.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	18668534	SNP-3.18667315.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	./.	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18672293	SNP-3.18671074.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	./.	0/0	./.	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/1	./.	1/1	0/0	0/1	0/0	0/0	./.	0/1	0/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	18672970	SNP-3.18671751.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18673545	SNP-3.18672326.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	./.	0/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	18675080	SNP-3.18673861.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	./.	./.	./.	0/0	1/1	0/0	./.	./.	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	18675738	SNP-3.18674519.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/1	0/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18681590	SNP-3.18680349.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aAg/aCg|p.Lys283Thr/c.848T>C|837|LOC_Os03g32620|protein_coding|CODING|LOC_Os03g32620.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	./.	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	./.	0/1	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	./.	0/1	0/0
+3	18683390	SNP-3.18682149.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/1	0/1	0/1	0/0	0/0	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	./.	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/1	1/1	0/0	1/1	./.	0/0	1/1	0/0	./.	./.	0/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/1	0/1	0/1	./.	1/1	0/0
+3	18683411	SNP-3.18682170.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18687173	SNP-3.18685932.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gAg/gTg|p.Glu710Val/c.2129G>T|710|LOC_Os03g32630|protein_coding|CODING|LOC_Os03g32630.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	./.	0/0	0/0	./.	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	0/1	0/1	0/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	./.	1/1	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	./.	0/0
+3	18687536	SNP-3.18686295.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aAg/aCg|p.Lys589Thr/c.1766T>C|710|LOC_Os03g32630|protein_coding|CODING|LOC_Os03g32630.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/1	0/0	./.	0/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/1	1/1	0/0	0/1	0/0	1/1	1/1	0/1	0/0	1/1	0/0	1/1	0/0	0/1	0/1	1/1	1/1	1/1	0/0	0/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	./.	0/1	0/0	0/1	1/1
+3	18688918	SNP-3.18687677.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|gcA/gcT|p.Ala128Ala/c.384G>T|710|LOC_Os03g32630|protein_coding|CODING|LOC_Os03g32630.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	./.	./.	0/0	1/1	0/0	./.	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	./.	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	18691370	SNP-3.18690129.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.75+241C>A|71|LOC_Os03g32636|protein_coding|CODING|LOC_Os03g32636.1|1|1)	GT	0/0	1/1	./.	1/1	0/1	0/0	./.	1/1	1/1	1/1	./.	0/1	0/0	./.	0/1	1/1	./.	0/0	1/1	0/0	0/1	0/1	0/1	1/1	0/1	0/1	0/1	0/1	0/1	0/1	./.	./.	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/1	0/1	./.	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	1/1	./.	0/1	1/1	./.	0/1	0/1	0/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	./.	0/0	./.	./.	./.	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	./.	./.	0/1	0/0	./.	0/0	0/0	./.	./.	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	18691782	SNP-3.18690541.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.76-224A>G|71|LOC_Os03g32636|protein_coding|CODING|LOC_Os03g32636.1|1|1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	18691986	SNP-3.18690745.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.76-20C>A|71|LOC_Os03g32636|protein_coding|CODING|LOC_Os03g32636.1|1|1)	GT	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	./.	0/0	1/1	0/0
+3	18692796	SNP-3.18691555.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	18693936	SNP-3.18692695.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	./.	0/0	./.	1/1	0/0	./.	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	./.	0/0	0/1	0/0	./.	./.	./.	0/0	0/0	./.	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	./.	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	0/1	./.	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/1	./.	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/1	0/0	0/0	0/1	0/0	1/1	0/1	0/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	./.	1/1	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	0/0	./.	./.	0/0	1/1	0/0
+3	18694773	SNP-3.18693532.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.109-13G>T|111|LOC_Os03g32642|protein_coding|CODING|LOC_Os03g32642.1|1|1)	GT	./.	1/1	0/0	./.	./.	0/0	./.	1/1	1/1	./.	./.	./.	0/0	./.	./.	./.	0/0	./.	1/1	./.	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	./.	0/1	./.	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	./.	0/0
+3	18695016	SNP-3.18693775.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/1	0/0	1/1	1/1	0/0	1/1	./.	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0
+3	18697802	SNP-3.18696561.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	./.	./.	1/1	0/1	1/1	1/1	./.	0/1	./.	0/0	./.	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/1	1/1	1/1	0/1	0/0	0/1	0/1	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	./.	0/1	./.	./.	0/0	0/0	0/0	1/1	1/1	0/1	./.	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1
+3	18697909	SNP-3.18696668.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	./.	0/0	0/0	./.	./.	1/1	./.	./.	0/0	./.	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	./.	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	./.	./.	./.	./.	./.	0/0	./.	./.	1/1	1/1	1/1	./.	0/0	./.	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	1/1	./.	1/1	./.	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	./.	0/1	0/0	./.	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	./.	./.	0/0	./.	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	0/0	./.	1/1	./.	./.	0/0	./.	./.	0/0
+3	18707780	SNP-3.18706539.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	./.	./.	./.	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	1/1	0/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	./.	0/0	./.	./.	1/1	1/1	1/1	0/0	0/1	./.	0/1	./.	./.	0/0	1/1	1/1	./.	0/1	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	18710665	SNP-3.18709424.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aCt/aTt|p.Thr45Ile/c.134G>T|116|LOC_Os03g32664|protein_coding|CODING|LOC_Os03g32664.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	1/1	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/1	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	./.	0/1	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/1	./.	./.	0/0	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	0/1	0/1	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/1	./.	0/0	0/0	0/0	./.	1/1	0/1	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	./.	./.	1/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.
+3	18712119	SNP-3.18710878.	C	A	.	.	PR;EFF=synonymous_variant(LOW||cAg/cAg|p.Gln42Gln/c.125C>A|98|LOC_Os03g32670|protein_coding|CODING|LOC_Os03g32670.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	0/1	./.	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18714288	SNP-3.18713047.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	1/1	0/1	0/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/1	./.	0/0	0/1	0/1	0/0	0/1	0/1	0/0	0/1	0/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/1	./.	0/0
+3	18716479	SNP-3.18715238.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18718548	SNP-3.18717307.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	0/0	1/1	0/0	1/1	1/1	0/0	./.	./.	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	1/1	./.	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	./.	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	./.	./.	1/1
+3	18721636	SNP-3.18720395.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	18722594	SNP-3.18721353.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	./.	./.	0/0	1/1	0/0	0/0	0/1	./.	1/1	1/1	0/0	1/1	./.	0/1	./.	1/1	1/1	1/1	0/1	1/1	1/1	0/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/1	1/1	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/1	1/1	0/0	0/0
+3	18728215	SNP-3.18726974.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18729426	SNP-3.18728185.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	./.	1/1	./.	./.	./.	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	./.	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	./.	./.	./.	./.	./.	./.	1/1	./.	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	./.	0/0	1/1	./.	./.	./.	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	1/1	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	./.	1/1	1/1	./.	./.	./.	1/1	./.	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	./.	./.	1/1	./.	0/0	1/1	./.	./.	0/0	0/0	1/1	./.	1/1	0/0	0/0	1/1	./.	1/1	1/1	0/0	./.	./.	./.	0/0	1/1	0/0	0/0	./.	./.	./.	0/0	0/0	./.	./.	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	./.	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	./.	1/1	./.	1/1	0/0	./.	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	./.	1/1	1/1	0/0	./.
+3	18730511	SNP-3.18729270.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/1	0/0	1/1	0/1	./.	0/0	0/0	0/0	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	0/0	./.	./.	1/1	./.	0/0	./.	0/1	./.	1/1	1/1	./.	./.	./.	0/1	./.	1/1	0/0	./.	1/1	1/1	0/0	./.	0/0	./.	./.	./.	1/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	./.	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	1/1	0/1	0/0	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	./.	./.	1/1	./.	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	./.	0/0	1/1	./.	./.	./.	./.	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	./.	./.	1/1
+3	18732079	SNP-3.18730838.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|tTc/tAc|p.Phe291Tyr/c.872C>A|654|LOC_Os03g32690|protein_coding|CODING|LOC_Os03g32690.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	./.	1/1	0/0	1/1	./.	./.	1/1	1/1	./.	1/1	./.	1/1	0/0	0/0	1/1	./.	1/1	1/1	./.	0/0	./.	./.	./.	0/0	./.	1/1	1/1	./.	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	1/1	0/0
+3	18733051	SNP-3.18731810.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|acC/acA|p.Thr544Thr/c.1632C>A|654|LOC_Os03g32690|protein_coding|CODING|LOC_Os03g32690.1|4|1)	GT	0/0	1/1	0/0	1/1	1/1	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0
+3	18733512	SNP-3.18732271.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/1	1/1	0/0	./.	1/1	0/0	./.	./.	1/1	./.	0/0	0/0	0/0	1/1	./.	./.	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	./.	0/0	0/0	./.	0/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	./.	0/0	0/1	./.	0/0	./.	./.	./.	./.	1/1	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	0/1	1/1	1/1	1/1	./.	./.	./.	1/1	./.	1/1	./.	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/1	./.	./.	./.	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	./.	./.	0/0	0/0	0/1	0/0	0/1	./.	./.	0/0	1/1	0/0	0/1	1/1	1/1	./.	./.	./.	0/0	1/1	0/0	0/0	0/0	./.	./.	./.	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	0/0	./.	./.	1/1	0/0
+3	18734715	SNP-3.18733474.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	0/0	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	./.	./.	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	./.	./.	1/1	0/0	1/1	./.	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.	1/1	0/0	1/1	./.	0/0	0/0	1/1	./.	1/1	./.	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	./.	0/0	0/0	1/1	./.	./.	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0
+3	18739438	SNP-3.18738197.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	1/1	./.	1/1	1/1	0/0	./.	./.	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	./.	./.	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	./.	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	./.	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	./.	./.	./.	1/1	1/1	./.	./.	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1
+3	18745988	SNP-3.18744747.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/1	./.	0/0	./.	0/0	0/1	0/1	./.	0/1	0/0	./.	0/0	0/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	0/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/1	1/1	0/0	./.	0/0	0/0	0/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	./.	0/0	1/1	0/0
+3	18747914	SNP-3.18746673.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	0/0	./.	0/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/1	./.	0/1	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	./.	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/1	0/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	./.	1/1	0/0
+3	18749265	SNP-3.18748024.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|tGg/tCg|p.Trp262Ser/c.785T>C|396|LOC_Os03g32730|protein_coding|CODING|LOC_Os03g32730.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/1	./.	1/1	1/1	0/0	1/1	./.	0/1	1/1	1/1	./.	1/1	1/1	./.	1/1	0/1	0/1	1/1	./.	0/1	0/1	./.	0/1	1/1	1/1	1/1	./.	./.	1/1	0/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/1	./.	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/1	./.	0/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	./.	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	./.	0/0	0/0	./.	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	./.	0/0	1/1	1/1	./.	./.	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/1	./.	0/1	./.	0/1	0/1	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	./.	0/0	1/1
+3	18749284	SNP-3.18748043.	C	A	.	.	PR;EFF=stop_gained(HIGH|NONSENSE|Aaa/Taa|p.Lys256*/c.766G>T|396|LOC_Os03g32730|protein_coding|CODING|LOC_Os03g32730.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	./.	1/1	1/1	0/0	1/1	1/1	0/1	1/1	./.	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	./.	1/1	0/1	0/0	./.	0/0	1/1	1/1	1/1	0/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18749395	SNP-3.18748154.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Gcg/Ccg|p.Ala219Pro/c.655T>C|396|LOC_Os03g32730|protein_coding|CODING|LOC_Os03g32730.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/1	0/0	./.	0/0	1/1	0/1	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	0/1	0/0	./.	./.	0/0	./.	./.	1/1	1/1	1/1	1/1	./.	0/0	0/1	1/1	1/1	1/1	./.	1/1	0/1	0/0	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	./.	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	1/1	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/1	0/0	1/1	1/1	0/0	0/1	1/1	./.	./.	1/1	./.	0/1	0/0	1/1	1/1	0/0	./.	0/0	1/1	1/1	0/0	0/0	./.	1/1	./.	0/0	1/1	0/0	1/1	0/0	./.	1/1	1/1	0/0	./.	./.	0/1	1/1	./.	./.	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	1/1	./.	./.	0/0	1/1
+3	18749735	SNP-3.18748494.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ccG/ccT|p.Pro138Pro/c.414G>T|396|LOC_Os03g32730|protein_coding|CODING|LOC_Os03g32730.1|2|1)	GT	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	./.	0/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	0/0	0/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/1	1/1	0/0	0/0	./.	./.	./.	1/1	0/0	./.	0/0	./.	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/1	0/0	./.	0/0	./.	./.	./.	1/1	./.	0/0	./.	1/1	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	./.	1/1	./.	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	18750724	SNP-3.18749483.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	./.	0/0	./.	./.	./.	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	./.	./.	1/1	0/0	./.	./.	./.	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.
+3	18751362	SNP-3.18750121.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Agg/Tgg|p.Arg593Trp/c.1777G>T|738|LOC_Os03g32749|protein_coding|CODING|LOC_Os03g32749.1|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	./.	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	0/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18751506	SNP-3.18750265.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Cgc/Tgc|p.Arg545Cys/c.1633G>T|738|LOC_Os03g32749|protein_coding|CODING|LOC_Os03g32749.1|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/1	./.	0/0	0/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	18753459	SNP-3.18752218.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.463-349G>T|738|LOC_Os03g32749|protein_coding|CODING|LOC_Os03g32749.1|2|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	0/1	0/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	1/1	1/1	0/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	18753953	SNP-3.18752712.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.462+190G>T|738|LOC_Os03g32749|protein_coding|CODING|LOC_Os03g32749.1|2|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	18754343	SNP-3.18753102.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.373-111G>T|738|LOC_Os03g32749|protein_coding|CODING|LOC_Os03g32749.1|1|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	1/1	./.	1/1	1/1	0/0	1/1	./.	./.	0/0	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	1/1	./.	1/1	1/1	./.	./.	1/1	./.	0/0	0/0	./.	1/1	./.	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	./.	1/1	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0
+3	18755603	SNP-3.18754362.	C	A	.	.	PR;EFF=synonymous_variant(LOW||aTa/aTa|p.Ile84Ile/c.251G>T|738|LOC_Os03g32749|protein_coding|CODING|LOC_Os03g32749.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/1	0/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18758727	SNP-3.18757486.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.157-390C>A|476|LOC_Os03g32770|protein_coding|CODING|LOC_Os03g32770.1|1|1)	GT	./.	1/1	0/1	1/1	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	1/1	1/1	./.	1/1	0/0	./.	1/1	1/1	./.	./.	./.	1/1	./.	1/1	./.	./.	./.	./.	1/1	1/1	./.	0/0	./.	0/0	1/1	1/1	./.	./.	./.	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0
+3	18759891	SNP-3.18758650.	C	A	.	.	PR;EFF=synonymous_variant(LOW||Aca/Aca|p.Thr294Thr/c.880C>A|476|LOC_Os03g32770|protein_coding|CODING|LOC_Os03g32770.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/1	0/1	0/0	./.	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	./.	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/1	0/0	1/1	0/0	./.	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	1/1	0/0	0/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	./.	1/1	1/1	0/0
+3	18761242	SNP-3.18760001.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	./.	0/0	1/1	0/0	0/0	./.	1/1	1/1	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	./.	1/1	0/0	./.	1/1	./.	1/1	./.	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	1/1	./.
+3	18761440	SNP-3.18760199.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	0/0	1/1	1/1	0/0	1/1	./.	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/1	0/1	0/1	./.	./.	0/0	0/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	./.	0/1	1/1	0/0	1/1	./.	1/1	0/0	0/1	0/0	./.	0/1	1/1	./.	0/0	0/0	1/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/1	1/1	1/1	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	./.	0/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	./.	./.	1/1	./.	1/1	./.	./.	1/1	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1
+3	18767602	SNP-3.18766361.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18767876	SNP-3.18766635.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0
+3	18770394	SNP-3.18769153.	A	G	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||209|c.*209A>G|191|LOC_Os03g32790|protein_coding|CODING|LOC_Os03g32790.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME),3_prime_UTR_variant(MODIFIER||209|c.*209A>G|191|LOC_Os03g32790|protein_coding|CODING|LOC_Os03g32790.2|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME),3_prime_UTR_variant(MODIFIER||209|c.*209A>G|150|LOC_Os03g32790|protein_coding|CODING|LOC_Os03g32790.3|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/1	0/0	1/1	1/1	0/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	0/0	0/1	./.	0/1	1/1	0/0	./.	./.	./.	1/1	0/1	1/1	0/1	0/1	./.	./.	0/1	./.	./.	1/1	1/1	0/0	1/1	./.	0/0	0/1	1/1	./.	1/1	./.	0/1	0/0	./.	0/1	1/1	0/0	1/1	0/0	1/1	./.	./.	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	./.	0/1	./.	0/1	./.	0/0	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/1	./.	1/1	0/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/1	0/0	0/1	./.	./.	./.	0/1	1/1	0/1	0/0	0/0	0/0	./.	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1
+3	18770657	SNP-3.18769416.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18770748	SNP-3.18769507.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18771856	SNP-3.18770615.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	./.	1/1	./.	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/1	0/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	18772680	SNP-3.18771439.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	1/1	0/0	./.	1/1	./.	1/1	0/0	./.	./.	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	./.	./.	0/0	1/1	./.	1/1	./.	1/1	./.	./.	0/0	1/1	1/1	1/1	0/0	1/1	1/1	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	./.	./.	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	1/1	./.	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0
+3	18773308	SNP-3.18772067.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	18774925	SNP-3.18773684.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	./.	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	./.	0/0	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	./.	1/1	1/1	./.	./.	1/1	0/0	1/1	./.	0/0	1/1	./.	0/0	1/1	1/1	0/0	./.	./.	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	0/0	./.	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0
+3	18775732	SNP-3.18774491.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ctG/ctA|p.Leu25Leu/c.75C>A|162|LOC_Os03g32810|protein_coding|CODING|LOC_Os03g32810.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	./.	1/1	0/0	./.	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	./.	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	0/0	./.	./.	1/1	./.	0/0	0/0	./.	0/0	1/1	./.	./.	1/1	0/0	1/1	0/0	0/0	1/1	./.	./.	0/0	./.	1/1	0/0	./.	0/0	1/1	./.	0/0	0/0	1/1	1/1	./.	./.	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	./.	1/1	0/0
+3	18775875	SNP-3.18774634.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cTg/cAg|p.Leu73Gln/c.218C>A|162|LOC_Os03g32810|protein_coding|CODING|LOC_Os03g32810.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	./.	1/1	1/1	1/1	./.	./.	1/1	./.	./.	1/1	1/1	./.	1/1	./.	1/1	./.	./.	./.	0/0	1/1	1/1	0/1	0/0	0/1	0/0	0/0	1/1	0/0	0/1	1/1	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/1	0/0	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	./.	0/0
+3	18776754	SNP-3.18775513.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	1/1	0/1	0/1	./.	0/1	1/1	0/0	0/1	1/1	./.	0/0	0/0	0/0	0/1	0/0	0/0	./.	./.	1/1	./.	1/1	0/0	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/1	./.	./.	./.	1/1	1/1	0/1	0/1	0/0	1/1	1/1	0/0	1/1	0/0	./.	./.	0/0	0/0	0/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	0/0	1/1	1/1	0/1	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	./.	0/0	./.	1/1	./.	1/1	1/1	0/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	./.	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	18779415	SNP-3.18778174.	C	A	.	.	PR;EFF=synonymous_variant(LOW||tcA/tcA|p.Ser94Ser/c.282C>A|275|LOC_Os03g32820|protein_coding|CODING|LOC_Os03g32820.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	./.	0/0	1/1	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/1	0/1	1/1	1/1	0/1	0/1	1/1	0/0	./.	1/1	1/1	0/1	0/1	0/1	1/1	0/1	0/0	./.	1/1	1/1	0/1	./.	./.	./.	0/0	1/1	0/0	./.	./.	0/1	0/0	0/1	0/0	0/1	./.	./.	1/1	0/1	0/0	0/0	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	./.	0/0	./.	./.	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	1/1	0/0
+3	18779525	SNP-3.18778284.	A	G	.	.	PR;EFF=synonymous_variant(LOW||tGg/tGg|p.Trp131Trp/c.392A>G|275|LOC_Os03g32820|protein_coding|CODING|LOC_Os03g32820.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	./.	./.	1/1	1/1	./.	./.	./.	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	./.	1/1	./.	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	1/1	1/1	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	./.	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	./.	1/1	./.	1/1	0/0	./.	1/1	1/1	./.	./.	0/0	./.	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1
+3	18779961	SNP-3.18778720.	A	G	.	.	PR;EFF=stop_retained_variant(LOW||taG/taG|p.Ter276Ter/c.828A>G|275|LOC_Os03g32820|protein_coding|CODING|LOC_Os03g32820.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/1	0/0	./.	./.	0/0	0/0	0/0	./.	./.	0/1	1/1	./.	./.	0/0	0/1	1/1	./.	0/0	1/1	0/1	1/1	1/1	0/0	0/0	./.	./.	0/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	./.	0/1	0/0	1/1	0/0	./.	0/1	0/1	0/1	./.	./.	./.	0/1	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	./.	0/1	./.	0/0	1/1	1/1	0/0	0/1	1/1	./.	0/0	./.	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	./.	./.	0/0	./.	./.	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	./.	0/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	0/0	./.	1/1	./.	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	./.	./.	0/0	1/1
+3	18784095	SNP-3.18782854.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|ttG/ttC|p.Leu62Phe/c.186T>C|105|LOC_Os03g32830|protein_coding|CODING|LOC_Os03g32830.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0	./.	./.	0/0	./.	0/0	0/0	1/1	0/0	./.	1/1	0/0	./.	./.	./.	./.	./.	1/1	1/1	./.	./.	1/1	1/1	0/0	./.	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	0/0	1/1	0/0	0/0	./.	1/1	./.	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0
+3	18785749	SNP-3.18784508.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	./.	0/0	0/1	./.	0/0	0/0	./.	0/1	1/1	0/0	0/1	0/0	0/0	./.	0/0	./.	0/0	./.	./.	0/0	./.	0/1	0/1	./.	0/0	0/1	0/0	0/0	0/1	0/0	0/1	1/1	0/0	./.	./.	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	1/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	./.	0/1	0/0	./.	./.	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	./.	./.	./.	0/0	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	0/0	1/1	0/0	./.	0/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	./.	./.	1/1	0/0	1/1	1/1	./.	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1
+3	18786421	SNP-3.18785180.	A	G	.	.	PR;EFF=synonymous_variant(LOW||acG/acG|p.Thr115Thr/c.345A>G|155|LOC_Os03g32840|protein_coding|CODING|LOC_Os03g32840.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	./.	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	./.	1/1	./.	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	./.	1/1	0/0	./.
+3	18787780	SNP-3.18786539.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	./.	./.	1/1	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	./.	./.	1/1	1/1	0/0	./.	0/0	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	./.	./.	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	./.	1/1	0/0	0/0	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	./.	./.	./.	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	1/1	0/0	1/1
+3	18788889	SNP-3.18787648.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	./.	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1
+3	18789275	SNP-3.18788034.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	18791188	SNP-3.18789947.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.121-130A>G|809|LOC_Os03g32850|protein_coding|CODING|LOC_Os03g32850.1|1|1)	GT	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	0/0	./.	./.	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	1/1	1/1	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	1/1	./.	./.	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	1/1	./.	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	./.	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0
+3	18791989	SNP-3.18790748.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gaC/gaA|p.Asp264Glu/c.792C>A|809|LOC_Os03g32850|protein_coding|CODING|LOC_Os03g32850.1|2|1)	GT	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	1/1	./.	1/1	./.	0/0	0/0	1/1	0/0	./.	./.	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	./.	0/0	./.	1/1	0/0	./.	1/1	1/1	0/0	./.	0/0	1/1	1/1	./.	1/1	0/0	./.	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	./.	0/0	1/1	0/0
+3	18792338	SNP-3.18791097.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Gtt/Att|p.Val367Ile/c.1099C>A|809|LOC_Os03g32850|protein_coding|CODING|LOC_Os03g32850.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	0/0	./.	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	./.	./.	./.	0/0
+3	18792424	SNP-3.18791183.	C	A	.	.	PR;EFF=synonymous_variant(LOW||tcA/tcA|p.Ser395Ser/c.1185C>A|809|LOC_Os03g32850|protein_coding|CODING|LOC_Os03g32850.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	./.	./.	1/1	1/1	1/1	0/0	0/0	./.	./.	./.	./.	./.	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	0/0	./.	0/0	1/1	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	./.	./.	1/1	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	18792649	SNP-3.18791408.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ctC/ctA|p.Leu470Leu/c.1410C>A|809|LOC_Os03g32850|protein_coding|CODING|LOC_Os03g32850.1|3|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/1	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	1/1	0/0	0/0	0/0	0/1	0/1	./.	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/1	./.	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	0/1	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/1	0/1	./.	0/0	./.	1/1	1/1	0/1	0/0	0/0	./.	0/0	1/1	0/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	1/1	0/0	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/1	./.	1/1	0/0
+3	18792735	SNP-3.18791494.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cCt/cGt|p.Pro499Arg/c.1496A>G|809|LOC_Os03g32850|protein_coding|CODING|LOC_Os03g32850.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	18792809	SNP-3.18791568.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Gtt/Att|p.Val524Ile/c.1570C>A|809|LOC_Os03g32850|protein_coding|CODING|LOC_Os03g32850.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	./.	1/1	0/0	./.	./.	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	./.	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/1	0/1	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	1/1	0/0	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	0/0	./.	0/0	1/1	0/0
+3	18793195	SNP-3.18791954.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|aaG/aaA|p.Lys606Lys/c.1818C>A|809|LOC_Os03g32850|protein_coding|CODING|LOC_Os03g32850.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	0/1	1/1	1/1	1/1	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	./.	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0
+3	18793546	SNP-3.18792305.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|caC/caA|p.His723Gln/c.2169C>A|809|LOC_Os03g32850|protein_coding|CODING|LOC_Os03g32850.1|5|1)	GT	0/0	1/1	0/0	1/1	./.	./.	./.	./.	1/1	1/1	0/0	0/0	./.	./.	./.	1/1	./.	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	0/0	1/1	0/0	./.	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	0/0	./.	1/1	./.	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	./.	0/0	1/1	0/0	./.	./.	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0
+3	18798137	SNP-3.18796896.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	0/1	0/1	./.	1/1	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/1	0/0	1/1	1/1	./.	0/0	1/1	0/0	./.	./.	1/1	0/1	./.	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18798764	SNP-3.18797523.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	0/0	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	./.	./.	1/1	./.	./.	0/0	1/1	0/0	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	./.	0/0	1/1	./.	./.	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/1	1/1	0/0	0/0	./.	./.	1/1	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	./.	0/0	./.	./.	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0
+3	18802486	SNP-3.18801245.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.463-240T>C|397|LOC_Os03g32860|protein_coding|CODING|LOC_Os03g32860.1|2|1)	GT	./.	0/0	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	1/1	./.	0/0	./.	./.	0/0	1/1	./.	0/0	1/1	1/1	1/1	./.	0/0	1/1	0/0	./.	./.	1/1	1/1	0/0	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	1/1	./.	./.	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	1/1	./.	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	./.	./.	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	1/1	0/0	./.
+3	18805281	SNP-3.18804040.	A	G	.	.	PR;EFF=synonymous_variant(LOW||cCa/cCa|p.Pro19Pro/c.56T>C|369|LOC_Os03g32870|protein_coding|CODING|LOC_Os03g32870.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	./.	0/0	./.	1/1	1/1	1/1	./.	./.	0/0	./.	0/0	0/0	./.	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	./.	./.	1/1	0/0	./.	./.	./.	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	0/0	./.	1/1	./.	1/1	1/1	./.	./.	1/1	./.	1/1	./.	./.	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	./.	0/0	./.	./.	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	0/0	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	./.	1/1	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1
+3	18805487	SNP-3.18804246.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	./.	./.	./.	./.	./.	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	0/0	./.	./.	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	./.	1/1	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1	./.	0/0	0/0	1/1	0/0	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1
+3	18807288	SNP-3.18806047.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.91+214C>A|157|LOC_Os03g32880|protein_coding|CODING|LOC_Os03g32880.1|1|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	./.	0/0	./.	0/0	0/0	1/1	./.	./.	1/1	0/0	1/1	1/1	./.	./.	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0	./.	./.	./.	0/0	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	./.
+3	18808258	SNP-3.18807017.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Ttc/Atc|p.Phe135Ile/c.403C>A|157|LOC_Os03g32880|protein_coding|CODING|LOC_Os03g32880.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	./.	1/1	0/1	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18808464	SNP-3.18807223.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	./.	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/1	0/0	0/0	0/1	./.	./.	0/1	0/0	0/0	0/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	0/1	1/1	./.	./.	0/1	0/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/1	0/0	0/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	./.	0/0	0/0	./.	0/0
+3	18808696	SNP-3.18807455.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	./.	1/1	0/0	./.	./.	0/0	0/0	0/0	./.	1/1	./.	./.	1/1	./.	0/0	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	./.	./.	./.	./.	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	./.	1/1	0/0
+3	18809082	SNP-3.18807841.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	18812689	SNP-3.18811448.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.164-18G>T|503|LOC_Os03g32890|protein_coding|CODING|LOC_Os03g32890.1|1|1)	GT	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	0/0	1/1	0/0	./.	1/1	./.	1/1	./.	0/0	0/0	./.	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	./.	0/0	./.	0/0	1/1	./.	1/1	1/1	./.	./.	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	./.	1/1	./.	./.	./.	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	./.	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	./.	./.	1/1	0/0	./.	0/0
+3	18813873	SNP-3.18812632.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	0/1	./.	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	1/1	0/1	1/1	0/1	0/1	1/1	./.	0/0	0/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	1/1	./.	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/1	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/1	0/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	./.	./.	1/1	1/1	1/1	./.	0/1	0/0	0/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	./.	0/0	1/1	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	./.	1/1	0/0	1/1
+3	18815144	SNP-3.18813903.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	./.	0/0	./.	1/1	./.	0/0	0/0	./.	1/1	./.	./.	0/0	./.	0/0	1/1	./.	0/0	0/0	./.	1/1	./.	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	./.	./.	1/1	0/0	0/0	./.	./.	./.	1/1	./.	./.	1/1	./.	./.	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	0/0	1/1	./.	./.	0/0	0/0	./.	1/1	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1
+3	18817425	SNP-3.18816184.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	./.	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	./.	./.	./.	1/1	1/1	1/1	0/0	./.	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	1/1	1/1	0/0	./.	0/0	./.	0/0	./.	1/1	1/1	0/0	1/1	./.	./.	./.	1/1	0/0	1/1	0/0	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	./.
+3	18826402	SNP-3.18825161.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.221-268T>C|403|LOC_Os03g32920|protein_coding|CODING|LOC_Os03g32920.1|1|1)	GT	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	./.	./.	./.	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	./.	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	./.	0/0	./.	./.	0/0	0/0	1/1	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.
+3	18828845	SNP-3.18827604.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Acc/Tcc|p.Thr403Ser/c.1207G>T|712|LOC_Os03g32930|protein_coding|CODING|LOC_Os03g32930.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	./.	1/1	0/0	./.	./.	1/1	1/1	1/1	./.	./.	0/0	./.	./.	1/1	./.	0/0	1/1	./.	0/0	./.	./.	0/0	./.	0/1	./.	./.	0/0	./.	0/0	./.	./.	./.	0/0	./.	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	./.	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	1/1	./.	./.	1/1	./.	./.	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	./.	1/1	0/0
+3	18829038	SNP-3.18827797.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ctC/ctT|p.Leu338Leu/c.1014G>T|712|LOC_Os03g32930|protein_coding|CODING|LOC_Os03g32930.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	0/0	0/0	./.	1/1	./.	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	./.	./.	1/1	0/0	0/0	1/1	./.	0/0	1/1	./.	0/0	./.	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	0/0	./.	0/0	0/0	1/1	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	./.	./.	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.
+3	18834871	SNP-3.18833630.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Agt/Tgt|p.Ser240Cys/c.718G>T|586|LOC_Os03g32940|protein_coding|CODING|LOC_Os03g32940.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	./.	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	./.	./.	0/0	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.
+3	18834928	SNP-3.18833687.	A	G	.	.	PR;EFF=synonymous_variant(LOW||Caa/Caa|p.Gln221Gln/c.661T>C|586|LOC_Os03g32940|protein_coding|CODING|LOC_Os03g32940.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	./.	./.	./.	./.	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	./.	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	./.	0/0	./.	1/1	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	./.	./.	./.	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1
+3	18835579	SNP-3.18834338.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.354-204T>C|586|LOC_Os03g32940|protein_coding|CODING|LOC_Os03g32940.1|1|1)	GT	1/1	0/0	./.	0/0	0/1	./.	./.	0/0	0/0	0/0	0/1	0/1	1/1	0/1	./.	0/0	./.	1/1	0/0	./.	1/1	./.	0/0	1/1	0/1	./.	./.	./.	./.	0/1	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	./.	./.	0/0	0/0	0/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	0/1	./.	./.	./.	./.	./.	1/1	0/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/1	./.	0/0	0/1	./.	0/1	./.	./.	1/1	0/1	./.	0/0	1/1	./.	0/1	0/0	1/1	./.	1/1	./.	./.	./.	./.	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	./.	./.	1/1	./.	1/1	1/1	./.	./.	./.	./.	1/1	1/1	./.	./.	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	./.	./.	./.	0/0	1/1
+3	18852669	SNP-3.18851428.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ggA/ggG|p.Gly396Gly/c.1188A>G|401|LOC_Os03g32970|protein_coding|CODING|LOC_Os03g32970.1|2|1)	GT	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	./.	0/0	1/1	1/1	./.	1/1	./.	./.	./.	./.	1/1	./.	0/0	0/0	1/1	1/1	./.	./.	1/1	./.	0/0	./.	./.	0/0	./.	./.	0/0	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	0/0	0/0	./.	1/1	./.	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	1/1	./.	0/0	1/1	./.	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	1/1	0/0	./.	./.	./.	1/1	./.	./.	./.	./.	./.	1/1	0/0	0/0	./.	./.	./.	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	./.	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1
+3	18855626	SNP-3.18854385.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	./.	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	./.	./.	1/1	./.	./.	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18863952	SNP-3.18862711.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0
+3	18865056	SNP-3.18863815.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.205+739C>A|214|LOC_Os03g33000|protein_coding|CODING|LOC_Os03g33000.1|1|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	18865076	SNP-3.18863835.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.205+759A>G|214|LOC_Os03g33000|protein_coding|CODING|LOC_Os03g33000.1|1|1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	18865095	SNP-3.18863854.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.205+778A>G|214|LOC_Os03g33000|protein_coding|CODING|LOC_Os03g33000.1|1|1)	GT	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	1/1	0/1	1/1	./.	1/1	0/0	1/1	0/1	0/0	1/1	0/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	./.	0/1	1/1	0/1	0/1	0/1	./.	0/0	1/1	./.	0/1	0/0	0/1	0/0	1/1	1/1	1/1	0/1	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	0/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/1	0/1	0/1	0/1	0/0	0/0	1/1	0/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	0/1	./.	0/1	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/1	0/0	1/1	./.	0/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1
+3	18865748	SNP-3.18864507.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.206-189C>A|214|LOC_Os03g33000|protein_coding|CODING|LOC_Os03g33000.1|1|1)	GT	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	./.	./.	./.	./.	./.	./.	1/1	1/1	1/1	./.	./.	./.	./.	0/0	./.	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	./.	./.	./.	1/1	0/0	0/0	./.	1/1	0/0	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	18866029	SNP-3.18864788.	C	A	.	.	PR;EFF=synonymous_variant(LOW||Agc/Agc|p.Ser100Ser/c.298C>A|214|LOC_Os03g33000|protein_coding|CODING|LOC_Os03g33000.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	18866047	SNP-3.18864806.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Ggt/Agt|p.Gly106Ser/c.316C>A|214|LOC_Os03g33000|protein_coding|CODING|LOC_Os03g33000.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/1	0/1	0/1	0/1	./.	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	./.	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	18866067	SNP-3.18864826.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|acG/acA|p.Thr112Thr/c.336C>A|214|LOC_Os03g33000|protein_coding|CODING|LOC_Os03g33000.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/1	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	./.	./.	1/1	0/0
+3	18866089	SNP-3.18864848.	C	A	.	.	PR;EFF=synonymous_variant(LOW||Aca/Aca|p.Thr120Thr/c.358C>A|214|LOC_Os03g33000|protein_coding|CODING|LOC_Os03g33000.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18866323	SNP-3.18865082.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Cgc/Agc|p.Arg198Ser/c.592C>A|214|LOC_Os03g33000|protein_coding|CODING|LOC_Os03g33000.1|2|1)	GT	0/0	1/1	0/1	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/1	0/0	./.	0/0	./.	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/1	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	./.	./.	0/0	1/1	0/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	18868242	SNP-3.18867001.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	0/1	0/0	1/1	0/0	1/1	0/1	./.	./.	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0
+3	18868282	SNP-3.18867041.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	18868406	SNP-3.18867165.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	./.	./.	./.	./.	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	./.	./.	./.	0/0	1/1	0/0	1/1	1/1	./.	./.	./.	0/0	0/0	1/1	./.	0/0	1/1	./.	1/1	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	./.	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	./.	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	18869491	SNP-3.18868250.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	1/1	0/1	0/0	0/1	0/0	./.	1/1	0/1	0/1	./.	0/1	0/0	./.	./.	./.	./.	0/1	0/0	0/0	./.	./.	0/0	0/0	./.	1/1	./.	0/1	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/1	0/1	0/1	0/1	0/0	./.	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	./.	1/1	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	./.	1/1	./.	1/1	0/0	0/1	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	1/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	./.	./.	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/1	0/0	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	./.
+3	18869854	SNP-3.18868613.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	0/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/1	0/0	./.	1/1	1/1	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	0/0	./.	0/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	./.	0/0	./.	0/0	./.	./.	./.	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	18869855	SNP-3.18868614.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/1	./.	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/1	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/1	0/1	0/1	./.	0/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/1	0/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	1/1	./.	0/0	0/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/1	0/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/1	./.	./.	0/0	./.	0/0	0/1	0/1	0/0	./.	0/1	0/0	0/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/1	0/1	0/0	0/1	1/1	0/0
+3	18870770	SNP-3.18869529.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18870916	SNP-3.18869675.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	./.	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	./.	1/1	0/0	0/1	0/0	0/1	1/1	1/1	0/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18870952	SNP-3.18869711.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	./.	./.	0/0	./.	0/0	1/1	1/1	0/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	./.	0/0	./.	./.	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	./.	0/0	1/1	./.	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	./.	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.
+3	18871142	SNP-3.18869901.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18872231	SNP-3.18870990at.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	1/1	0/0	0/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	./.	0/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	./.	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	0/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/1	0/0	1/1	1/1	./.	./.	1/1	./.	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1
+3	18872231	SNP-3.18870990ac.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	18875926	SNP-3.18874685.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	0/1	0/1	0/0	0/1	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	1/1	0/0	0/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18875999	SNP-3.18874758.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	18880737	SNP-3.18879496.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	18882188	SNP-3.18880947.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	./.	0/0	0/0	./.	./.	./.	./.	./.	0/0	0/0	./.	1/1	./.	./.	1/1	0/0	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	./.	./.	1/1	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	./.	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0
+3	18883386	SNP-3.18882145.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.321+595C>A|477|LOC_Os03g33012|protein_coding|CODING|LOC_Os03g33012.1|1|1)	GT	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	./.	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18884077	SNP-3.18882836.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.321+1286C>A|477|LOC_Os03g33012|protein_coding|CODING|LOC_Os03g33012.1|1|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/1	0/1	1/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	18884772	SNP-3.18883531.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.321+1981C>A|477|LOC_Os03g33012|protein_coding|CODING|LOC_Os03g33012.1|1|1)	GT	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/1	./.	0/0	0/0	0/0	1/1	0/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0
+3	18887307	SNP-3.18886066.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.322-2108A>G|477|LOC_Os03g33012|protein_coding|CODING|LOC_Os03g33012.1|1|1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	./.	1/1	1/1	1/1	./.	0/0	./.	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	18889381	SNP-3.18888140.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.322-34C>A|477|LOC_Os03g33012|protein_coding|CODING|LOC_Os03g33012.1|1|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	0/1	0/1	0/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18891889	SNP-3.18890648.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.1161-819C>A|477|LOC_Os03g33012|protein_coding|CODING|LOC_Os03g33012.1|3|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/1	1/1	./.	0/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	1/1	0/1	0/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/1	./.	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	18893246	SNP-3.18892005.	C	A	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||265|c.*265C>A|477|LOC_Os03g33012|protein_coding|CODING|LOC_Os03g33012.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18901067	SNP-3.18899826.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Tca/Aca|p.Ser209Thr/c.625C>A|351|LOC_Os03g33042|protein_coding|CODING|LOC_Os03g33042.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	./.	0/0	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	./.	1/1	1/1	1/1	./.	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	18901541	SNP-3.18900300.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	./.	1/1	./.	./.	0/0	1/1	./.	1/1	1/1	0/0	1/1	./.	0/0	./.	0/0	0/0	1/1	1/1	./.	1/1	./.	0/0	./.	./.	./.	./.	1/1	./.	./.	0/0	1/1	./.	./.	./.	./.	./.	./.	0/0	0/0	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0
+3	18901857	SNP-3.18900616.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	./.	1/1	0/0	0/0	0/0	1/1	./.	0/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/1	./.	0/0	1/1	1/1	0/1	0/1	./.	./.	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	./.	./.	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	18902596	SNP-3.18901355.	A	G	.	.	PR;EFF=synonymous_variant(LOW||ctG/ctG|p.Leu179Leu/c.537A>G|209|LOC_Os03g33044|protein_coding|CODING|LOC_Os03g33044.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	./.	1/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	0/0	0/0	1/1	./.	0/0	./.	./.	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	./.	1/1	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	./.	./.	./.	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1
+3	18919878	SNP-3.18918637.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.378-278G>T|242|LOC_Os03g33060|protein_coding|CODING|LOC_Os03g33060.1|2|1)	GT	0/0	1/1	./.	./.	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18921244	SNP-3.18920003.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.207-16G>T|242|LOC_Os03g33060|protein_coding|CODING|LOC_Os03g33060.1|1|1)	GT	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	./.	1/1	./.	1/1	0/0	1/1	./.	0/1	1/1	1/1	0/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	./.	1/1	./.	0/1	0/0	1/1	0/0	1/1	0/1	./.	0/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	18922800	SNP-3.18921559.	C	A	.	.	PR;EFF=synonymous_variant(LOW||aTt/aTt|p.Ile110Ile/c.329G>T|189|LOC_Os03g33070|protein_coding|CODING|LOC_Os03g33070.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/1	1/1	0/0	1/1	0/1	0/1	0/0	0/1	0/0	1/1	0/1	0/0	0/1	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/1	0/0	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	./.	1/1	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/1	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0
+3	18923292	SNP-3.18922051.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/1	1/1	0/1	0/1	0/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	1/1	0/1	./.	0/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	1/1	0/0
+3	18923377	SNP-3.18922136.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	./.	1/1	./.	./.	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1
+3	18923502	SNP-3.18922261.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0
+3	18924201	SNP-3.18922960.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	0/0	0/0	1/1	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	./.	0/0	./.	0/0	1/1	0/0
+3	18925620	SNP-3.18924379.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	1/1	0/0	./.	0/0	./.	0/0	1/1	0/0	1/1	./.	./.	1/1	0/0	./.	1/1	0/0	./.	0/0	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	./.	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	./.	./.	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	./.	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0
+3	18926620	SNP-3.18925379.	C	A	.	.	PR;EFF=synonymous_variant(LOW||aTa/aTa|p.Ile786Ile/c.2357G>T|819|LOC_Os03g33080|protein_coding|CODING|LOC_Os03g33080.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/1	1/1	0/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0
+3	18929154	SNP-3.18927913.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Gta/Cta|p.Val20Leu/c.58T>C|819|LOC_Os03g33080|protein_coding|CODING|LOC_Os03g33080.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1
+3	18929968	SNP-3.18928727.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	./.	0/0	0/1	1/1	1/1	1/1	0/1	./.	0/0	0/1	0/1	1/1	0/0	0/1	0/1	0/1	0/0	0/1	0/1	0/0	./.	0/1	0/1	0/1	0/1	./.	0/1	0/1	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	./.	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/1	0/0	0/1	0/0	1/1	0/1	0/1	./.	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	1/1	0/1	./.	0/1	0/1	./.	./.	0/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/1	0/1	1/1	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	0/1	./.	./.	0/0	0/1	0/0	0/0	0/1	0/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	18930411	SNP-3.18929170.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	18930486	SNP-3.18929245.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	1/1	./.	0/0	./.	./.	0/0	./.	./.	./.	./.	1/1	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	./.	1/1	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	./.	0/0	./.	0/0	./.	./.	./.	0/0	0/0	./.	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	1/1	./.	./.	1/1	./.	0/0	./.	0/0
+3	18930903	SNP-3.18929662.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/1	0/0	1/1	0/0	0/0	0/1	0/0	0/1	0/1	./.	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	18932532	SNP-3.18931291.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/1	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	18934236	SNP-3.18932995.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18937085	SNP-3.18935844.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	./.	./.	0/0	1/1	./.	0/0	1/1	./.	1/1	0/0	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	./.	./.	0/0	./.	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	./.	0/0	0/0	1/1	1/1	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	./.	0/0	./.	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	0/0	./.	./.	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.
+3	18937985	SNP-3.18936744.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Aat/Cat|p.Asn1224His/c.3670T>C|1370|LOC_Os03g33100|protein_coding|CODING|LOC_Os03g33100.1|9|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	1/1	./.	1/1	./.	1/1	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/1	0/0	./.	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/1	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	./.	./.	0/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0
+3	18939087	SNP-3.18937846.	C	A	.	.	PR;EFF=synonymous_variant(LOW||gTt/gTt|p.Val928Val/c.2783G>T|1370|LOC_Os03g33100|protein_coding|CODING|LOC_Os03g33100.1|8|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	./.	./.	0/0	0/0	./.	./.	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	./.	./.	./.	./.	./.	./.	./.	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	1/1	./.	1/1	./.	1/1	0/0	1/1	0/0	./.	./.	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0
+3	18939114	SNP-3.18937873.	C	A	.	.	PR;EFF=synonymous_variant(LOW||gTc/gTc|p.Val919Val/c.2756G>T|1370|LOC_Os03g33100|protein_coding|CODING|LOC_Os03g33100.1|8|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	./.	1/1	0/0	./.	0/1	0/0	./.	./.	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/1	./.	0/0	1/1	0/0	1/1	0/1	0/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	0/1	0/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	18948677	SNP-3.18947436.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.101-230C>A|370|LOC_Os03g33110|protein_coding|CODING|LOC_Os03g33110.1|1|1)	GT	0/1	1/1	./.	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	./.	./.	./.	0/0
+3	18948838	SNP-3.18947597.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.101-69C>A|370|LOC_Os03g33110|protein_coding|CODING|LOC_Os03g33110.1|1|1)	GT	0/0	1/1	./.	1/1	./.	1/1	0/0	./.	1/1	1/1	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	./.	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	./.	./.	1/1	0/0	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	./.	./.	1/1	./.	./.	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	1/1	./.	./.	./.	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	./.	./.	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	1/1	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	./.	0/0	./.	./.	1/1	0/0
+3	18950066	SNP-3.18948825.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|gcG/gcA|p.Ala351Ala/c.1053C>A|370|LOC_Os03g33110|protein_coding|CODING|LOC_Os03g33110.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	./.	./.	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	1/1	0/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	./.	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	./.	./.	0/0	1/1	0/0	1/1	./.	./.	1/1	0/0	./.	1/1	0/0	1/1	0/0	1/1	./.	0/1	0/0	0/0	0/0	./.	0/0	./.	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/1	1/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	1/1	0/0	./.	./.	0/0
+3	18950548	SNP-3.18949307.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	0/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/1	./.	1/1	1/1	./.	0/0	0/1	1/1	0/0	0/1	0/0	1/1	1/1	0/0	0/0	1/1	0/1	1/1	1/1	1/1	0/1	1/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	./.	0/0	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/1	0/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	./.	./.	0/0	0/0	./.	1/1	1/1	./.	0/0	1/1	./.	0/0	0/1	0/0	0/1	./.	0/0	0/1	1/1	./.	0/0	./.	1/1	0/0	0/1	0/0	0/1	1/1	1/1	0/0	./.	0/1	0/0	./.	0/0	0/1	0/1	1/1	0/1	0/0	1/1	0/0	1/1	0/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	./.	./.	1/1	0/0	1/1
+3	18950913	SNP-3.18949672.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	./.	./.	./.	./.	./.	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	./.	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	./.	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0
+3	18964247	SNP-3.18963006.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18967087	SNP-3.18965846.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Gca/Cca|p.Ala382Pro/c.1144T>C|645|LOC_Os03g33160|protein_coding|CODING|LOC_Os03g33160.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	./.	0/0	./.	./.	0/0	./.	./.	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	1/1	./.	0/0	./.	./.	0/0	./.	1/1	./.	./.	1/1	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.
+3	18967396	SNP-3.18966155.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aaA/aaC|p.Lys297Asn/c.891T>C|645|LOC_Os03g33160|protein_coding|CODING|LOC_Os03g33160.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	18967417	SNP-3.18966176.	A	G	.	.	PR;EFF=synonymous_variant(LOW||aaC/aaC|p.Asn290Asn/c.870T>C|645|LOC_Os03g33160|protein_coding|CODING|LOC_Os03g33160.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	./.	./.	1/1	1/1	0/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/0	0/1	0/0	1/1	./.	./.	0/1	0/0	0/0	./.	./.	0/0	./.	1/1	1/1	1/1	./.	1/1	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	0/0	./.	1/1	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	./.	./.	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1
+3	18968191	SNP-3.18966950.	C	A	.	.	PR;EFF=synonymous_variant(LOW||aTa/aTa|p.Ile92Ile/c.275G>T|645|LOC_Os03g33160|protein_coding|CODING|LOC_Os03g33160.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	./.	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0
+3	18986724	SNP-3.18985483.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	./.	0/0	1/1	1/1	1/1	./.	./.	./.	./.	./.	1/1	1/1	./.	1/1	./.	0/0	1/1	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	./.	0/0	./.	./.	0/0	1/1	1/1	0/0	0/0	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	./.	0/0	0/0	./.	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	18987135	SNP-3.18985894.	C	A	.	.	PR;EFF=stop_gained(HIGH|NONSENSE|Aga/Tga|p.Arg409*/c.1225G>T|531|LOC_Os03g33190|protein_coding|CODING|LOC_Os03g33190.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	./.	./.	0/0	./.	0/0	0/0	1/1	1/1	1/1	./.	1/1	./.	./.	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	./.	1/1	0/0	0/0	0/0	1/1	0/0	./.	./.	1/1	1/1	0/0	./.	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0	./.	0/0	./.	1/1	./.	0/0
+3	18988598	SNP-3.18987357.	C	A	.	.	PR;EFF=splice_region_variant(LOW|||c.821G>T|531|LOC_Os03g33190|protein_coding|CODING|LOC_Os03g33190.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW||gTc/gTc|p.Val274Val/c.821G>T|531|LOC_Os03g33190|protein_coding|CODING|LOC_Os03g33190.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18988892	SNP-3.18987651.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cAt/cTt|p.His176Leu/c.527G>T|531|LOC_Os03g33190|protein_coding|CODING|LOC_Os03g33190.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	./.	0/0	1/1	./.	1/1	0/0	./.	0/0	./.	./.	1/1	./.	1/1	0/0	0/0	./.	1/1	0/0	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	0/0	./.	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	18988967	SNP-3.18987726.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|tGg/tTg|p.Trp151Leu/c.452G>T|531|LOC_Os03g33190|protein_coding|CODING|LOC_Os03g33190.1|1|1)	GT	./.	1/1	0/0	1/1	./.	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	./.	1/1	0/0
+3	18988984	SNP-3.18987743.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|tcC/tcT|p.Ser145Ser/c.435G>T|531|LOC_Os03g33190|protein_coding|CODING|LOC_Os03g33190.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/1	1/1	0/1	1/1	0/1	0/1	0/0	./.	./.	0/1	./.	0/0	0/1	0/0	0/0	./.	./.	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	./.	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/1	./.	0/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	./.	0/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18989003	SNP-3.18987762.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gCg/gTg|p.Ala139Val/c.416G>T|531|LOC_Os03g33190|protein_coding|CODING|LOC_Os03g33190.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/1	1/1	0/0	1/1	0/0	0/0	0/1	1/1	1/1	1/1	./.	./.	0/0	0/1	./.	1/1	0/0	0/0	1/1	./.	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/1	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/1	1/1	1/1	./.	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/1	1/1	0/0	0/0	0/1	0/1	1/1	0/0	./.	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/0	./.	./.	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	./.	0/0	./.	1/1	0/0
+3	18989771	SNP-3.18988530.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	./.	0/0	./.	./.	1/1	0/0	0/0	1/1	0/1	./.	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/1	0/1	0/1	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	./.	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18990208	SNP-3.18988967.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|tAc/tTc|p.Tyr228Phe/c.683G>T|236|LOC_Os03g33200|protein_coding|CODING|LOC_Os03g33200.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	./.	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/1	./.	0/1	1/1	0/0	1/1	1/1	0/1	0/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	./.	0/1	1/1	1/1	./.	0/0	0/1	0/0	1/1	./.	0/1	1/1	0/1	0/0	0/0	1/1	0/1	0/0	1/1	1/1	./.	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	18990589	SNP-3.18989348.	C	A	.	.	PR;EFF=synonymous_variant(LOW||gTa/gTa|p.Val101Val/c.302G>T|236|LOC_Os03g33200|protein_coding|CODING|LOC_Os03g33200.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	./.	./.	./.	./.	0/0	0/0	1/1	1/1	./.	1/1	./.	./.	./.	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	18991158	SNP-3.18989917.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	18993950	SNP-3.18992709.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	./.	./.	./.	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/1	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	18994468	SNP-3.18993227.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aCc/aAc|p.Thr108Asn/c.323C>A|736|LOC_Os03g33220|protein_coding|CODING|LOC_Os03g33220.1|1|1)	GT	0/0	1/1	0/0	1/1	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	./.	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	1/1	./.	1/1	./.	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	19000902	SNP-3.18999661.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|Ctg/Ttg|p.Leu905Leu/c.2713G>T|1631|LOC_Os03g33230|protein_coding|CODING|LOC_Os03g33230.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	0/0	1/1	./.	0/0	./.	1/1	1/1	./.	0/0	./.	./.	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	1/1	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	1/1	./.
+3	19011011	SNP-3.19009770.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/1	./.	0/0	0/0	0/0	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	0/1	1/1	0/1	./.	0/1	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	1/1	1/1	./.	0/1	0/0	./.	./.	0/0	1/1	1/1	./.	0/0	0/1	0/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	1/1	./.	0/0	0/0	./.	0/1	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	./.	0/0
+3	19015538	SNP-3.19014297.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0
+3	19016872	SNP-3.19015631.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	0/0	./.	0/0	1/1	1/1	./.	0/0	./.	0/0	./.	./.	0/0	./.	./.	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	./.	./.	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19017621	SNP-3.19016380.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|ttT/ttA|p.Phe82Leu/c.246C>A|777|LOC_Os03g33240|protein_coding|CODING|LOC_Os03g33240.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/1	0/0	0/0	1/1	0/0
+3	19018686	SNP-3.19017445.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Att/Gtt|p.Ile358Val/c.1072A>G|777|LOC_Os03g33240|protein_coding|CODING|LOC_Os03g33240.1|2|1)	GT	0/1	0/0	0/1	0/1	0/0	0/1	./.	0/1	0/0	0/0	0/0	0/0	1/1	0/1	0/1	0/0	0/1	1/1	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/1	1/1	0/0	./.	./.	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	0/1	1/1	0/1	./.	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/1	./.	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	./.	0/1	1/1	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	0/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1
+3	19018989	SNP-3.19017748.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Ccg/Acg|p.Pro459Thr/c.1375C>A|777|LOC_Os03g33240|protein_coding|CODING|LOC_Os03g33240.1|2|1)	GT	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	0/0	./.	./.	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	./.	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	./.	./.	1/1	0/0	0/0	./.	1/1	0/0	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	19019053	SNP-3.19017812.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cCt/cAt|p.Pro480His/c.1439C>A|777|LOC_Os03g33240|protein_coding|CODING|LOC_Os03g33240.1|2|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	./.	1/1	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	./.	0/0	0/0	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	./.	./.	0/0	./.	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	19019327	SNP-3.19018086.	C	A	.	.	PR;EFF=synonymous_variant(LOW||ctA/ctA|p.Leu571Leu/c.1713C>A|777|LOC_Os03g33240|protein_coding|CODING|LOC_Os03g33240.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/1	1/1	1/1	0/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	0/0	1/1	0/0	1/1	0/1	1/1	./.	1/1	0/0	1/1	./.	./.	0/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19019901	SNP-3.19018660.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Cca/Aca|p.Pro698Thr/c.2092C>A|777|LOC_Os03g33240|protein_coding|CODING|LOC_Os03g33240.1|3|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/1	0/0	0/0	0/0	0/1	0/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	19020214	SNP-3.19018973.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	0/1	./.	1/1	0/0	./.	0/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/1	./.	0/0	0/0	0/1	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/1	0/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/1	1/1	0/1	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	./.	0/0	0/0	1/1	0/0
+3	19021018	SNP-3.19019777.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|gtA/gtT|p.Val832Val/c.2496G>T|839|LOC_Os03g33250|protein_coding|CODING|LOC_Os03g33250.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	./.	./.	0/0	./.	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	./.	./.	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	./.	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	./.	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	./.	./.	1/1	1/1	1/1	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1
+3	19021276	SNP-3.19020035.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|ttA/ttC|p.Leu746Phe/c.2238T>C|839|LOC_Os03g33250|protein_coding|CODING|LOC_Os03g33250.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	./.	./.	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	./.	1/1	./.	1/1	./.	./.	0/0	./.	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	./.	./.	0/0	0/0	0/1	0/0	0/1	1/1	./.	1/1	1/1	0/1	0/1	1/1	0/1	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	0/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	./.	0/0	0/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	./.	./.	./.	./.	1/1	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	./.	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/1	1/1	0/0	0/1	0/0	1/1	1/1	./.	1/1	0/0	0/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	./.	1/1	0/0	./.	0/0	1/1	0/1	./.	0/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1
+3	19022831	SNP-3.19021590.	C	A	.	.	PR;EFF=synonymous_variant(LOW||ttT/ttT|p.Phe272Phe/c.816G>T|839|LOC_Os03g33250|protein_coding|CODING|LOC_Os03g33250.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	./.	./.	./.	1/1	0/0	./.	1/1	0/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/1	0/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	0/1	0/1	./.	1/1	1/1	./.	./.	./.	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	19029066	SNP-3.19027825.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Tca/Cca|p.Ser223Pro/c.667T>C|600|LOC_Os03g33260|protein_coding|CODING|LOC_Os03g33260.1|1|1)	GT	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	./.	./.	./.	./.	./.	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	1/1	./.	1/1	0/0	0/0	1/1	./.	./.	./.	./.	1/1	./.	0/0	./.	1/1	0/0	1/1	./.	./.	./.	./.	1/1	./.	0/0	./.	./.	0/0	./.	0/0	1/1	1/1	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	./.	./.	./.	1/1	./.	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	./.	0/0	1/1	0/0	0/0	1/1	./.	./.	1/1	1/1	./.	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	1/1	./.	./.	0/0	1/1	./.	1/1	1/1	./.	./.	./.	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	./.	0/0	1/1
+3	19033441	SNP-3.19032200.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/1	0/0	./.	./.	1/1	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	0/1	0/0	0/0	./.	0/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	19033520	SNP-3.19032279.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	1/1	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	./.	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	./.	./.	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	./.	0/0	./.	./.	./.	1/1	./.	1/1	0/0	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	./.	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	1/1	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	./.	./.	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	0/0	./.	./.	1/1	1/1	1/1	./.	./.	0/0	0/0	./.	1/1	./.	0/0	0/0	./.	1/1	0/0	1/1	./.	./.	0/0	1/1	0/0	./.	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	./.	./.	./.	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	1/1	./.	1/1	./.
+3	19034694	SNP-3.19033453.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cTg/cGg|p.Leu95Arg/c.284A>G|1132|LOC_Os03g33280|protein_coding|CODING|LOC_Os03g33280.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	1/1	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	./.	1/1	1/1	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	./.	0/0
+3	19034859	SNP-3.19033618.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|tTc/tAc|p.Phe150Tyr/c.449C>A|1132|LOC_Os03g33280|protein_coding|CODING|LOC_Os03g33280.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	./.	1/1	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	./.	1/1	./.	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	./.	./.	1/1	0/0	./.	1/1	./.	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	./.	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0
+3	19038189	SNP-3.19036948.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ctC/ctG|p.Leu1058Leu/c.3174A>G|1132|LOC_Os03g33280|protein_coding|CODING|LOC_Os03g33280.1|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	./.	./.	1/1	./.	1/1	0/0	0/0	0/0	./.	./.	1/1	1/1	./.	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	./.	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	./.	0/0	1/1	1/1	0/1	1/1	./.	./.	1/1	0/0	./.	0/0	0/0	./.	0/0	./.	1/1	0/0	1/1	0/0	1/1	./.	./.	1/1	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	0/0	./.	./.	./.	0/0	./.	1/1	./.	0/0	0/0	0/0	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1
+3	19038303	SNP-3.19037062.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ccG/ccA|p.Pro1096Pro/c.3288C>A|1132|LOC_Os03g33280|protein_coding|CODING|LOC_Os03g33280.1|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0	./.	0/0	1/1	./.	./.	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	./.	0/1	1/1	0/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	./.	./.	./.	0/0	0/0	./.	./.	0/0	0/0	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	./.	0/0	1/1	./.	./.	0/0	0/0	0/0	1/1	0/0
+3	19039014	SNP-3.19037773.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	./.	0/0	1/1	./.	./.	./.	1/1	./.	./.	./.	./.	1/1	1/1	1/1	./.	0/1	./.	./.	./.	1/1	0/0	0/0	1/1	./.	./.	./.	0/0	1/1	./.	0/0	./.	1/1	./.	./.	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	./.	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	./.	1/1	./.	./.	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0
+3	19041315	SNP-3.19040074.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.1120-124G>T|651|LOC_Os03g33290|protein_coding|CODING|LOC_Os03g33290.1|3|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	1/1	1/1	0/0	./.	1/1	1/1	./.	1/1	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0	./.	0/0	./.	1/1	./.	0/0	./.	0/0	./.	./.	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	19043574	SNP-3.19042333.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aTg/aAg|p.Met29Lys/c.86C>A|1187|LOC_Os03g33300|protein_coding|CODING|LOC_Os03g33300.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	./.	0/0	./.	1/1	1/1	./.	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	19044516	SNP-3.19043275.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|acC/acG|p.Thr256Thr/c.768A>G|1187|LOC_Os03g33300|protein_coding|CODING|LOC_Os03g33300.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	0/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	1/1	./.	0/0	0/1	0/0	0/0	0/1	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/1	0/1	0/1	0/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/1	1/1	./.	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1
+3	19045129	SNP-3.19043888.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.836+545C>A|1187|LOC_Os03g33300|protein_coding|CODING|LOC_Os03g33300.1|3|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19046131	SNP-3.19044890.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.837-65A>G|1187|LOC_Os03g33300|protein_coding|CODING|LOC_Os03g33300.1|3|1)	GT	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	19046856	SNP-3.19045615.	C	A	.	.	PR;EFF=stop_gained(HIGH|NONSENSE|taC/taA|p.Tyr449*/c.1347C>A|1187|LOC_Os03g33300|protein_coding|CODING|LOC_Os03g33300.1|5|1);LOF=(LOC_Os03g33300|LOC_Os03g33300|1|1.00);NMD=(LOC_Os03g33300|LOC_Os03g33300|1|1.00)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/1	0/0	0/1	0/0	0/0	0/1	0/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	19046904	SNP-3.19045663.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|gtC/gtG|p.Val465Val/c.1395A>G|1187|LOC_Os03g33300|protein_coding|CODING|LOC_Os03g33300.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0
+3	19046950	SNP-3.19045709.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Gcc/Acc|p.Ala481Thr/c.1441C>A|1187|LOC_Os03g33300|protein_coding|CODING|LOC_Os03g33300.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	./.	0/0	0/1	0/0	0/0	0/1	0/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0
+3	19049058	SNP-3.19047817.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Gca/Aca|p.Ala689Thr/c.2065C>A|1187|LOC_Os03g33300|protein_coding|CODING|LOC_Os03g33300.1|8|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	19049571	SNP-3.19048330.	C	A	.	.	PR;EFF=synonymous_variant(LOW||Ata/Ata|p.Ile860Ile/c.2578C>A|1187|LOC_Os03g33300|protein_coding|CODING|LOC_Os03g33300.1|8|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/1	./.	0/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/1	./.	./.	./.	0/1	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	0/0	0/0	0/1	0/0	0/0	0/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	./.	./.	0/0	./.	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/1	1/1	./.	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	1/1	0/0	0/0	0/0	./.	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19050988	SNP-3.19049747.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Tgg/Agg|p.Trp1116Arg/c.3346C>A|1187|LOC_Os03g33300|protein_coding|CODING|LOC_Os03g33300.1|11|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	./.	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	19052901	SNP-3.19051660.	C	A	.	.	PR;EFF=synonymous_variant(LOW||cAa/cAa|p.Gln154Gln/c.461C>A|215|LOC_Os03g33310|protein_coding|CODING|LOC_Os03g33310.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	./.	./.	./.	1/1	0/0	./.	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/1	./.	./.	0/0	0/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	./.	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/1	1/1	./.	0/0	./.	./.	./.	0/0	0/0	./.	0/1	0/0	./.	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/1	0/0	./.	0/0	0/0	1/1	0/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/1	0/0	0/0	0/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	19053056	SNP-3.19051815.	A	G	.	.	PR;EFF=synonymous_variant(LOW||Ggt/Ggt|p.Gly206Gly/c.616A>G|215|LOC_Os03g33310|protein_coding|CODING|LOC_Os03g33310.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/1	./.	0/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	./.	0/0	1/1	1/1	0/0	1/1	0/0	./.	1/1	1/1	1/1	./.	1/1	./.	0/0	0/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	19062082	SNP-3.19060841.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Tgt/Agt|p.Cys716Ser/c.2146C>A|1031|LOC_Os03g33328|protein_coding|CODING|LOC_Os03g33328.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	./.	1/1	0/0	./.	1/1	./.	1/1	./.	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	./.	./.	./.	./.	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0
+3	19065499	SNP-3.19064258.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	./.	0/0	0/0	./.	1/1	1/1	0/0	0/0	./.	0/0	./.	1/1	0/0	./.	1/1	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	./.	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19065690	SNP-3.19064449.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	./.	./.	0/0	./.	1/1	./.	0/0	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	0/0	./.	./.	./.	./.	./.	./.	0/0	1/1	1/1	0/0	./.	./.	1/1	1/1	./.	1/1	./.	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	19076909	SNP-3.19075668.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aCg/aAg|p.Thr360Lys/c.1079C>A|442|LOC_Os03g33360|protein_coding|CODING|LOC_Os03g33360.1|3|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	./.	1/1	1/1	0/0	1/1	0/0	./.	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/1	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	1/1	./.	./.	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	1/1	0/0
+3	19077956	SNP-3.19076715.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	./.	0/0	0/0	./.	0/0	./.	./.	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	1/1	./.	./.	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	./.	./.	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	1/1	0/0	0/0	0/0	./.	0/0	1/1	./.	./.	0/0	./.	./.	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	./.	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	./.	0/0	./.	1/1	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1
+3	19079194	SNP-3.19077953.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Cgc/Ggc|p.Arg6Gly/c.16A>G|415|LOC_Os03g33370|protein_coding|CODING|LOC_Os03g33370.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	1/1	0/0	./.	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	./.	./.	1/1	./.	1/1	1/1	./.	1/1	./.	0/0	./.	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	./.	./.	1/1	./.	1/1	./.	./.	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	./.	0/0	1/1	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	./.	./.	./.	./.	./.	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	./.	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1
+3	19085363	SNP-3.19084122.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.226+776A>G|300|LOC_Os03g33380|protein_coding|CODING|LOC_Os03g33380.1|1|1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	./.	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/1	1/1	1/1	./.	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	1/1	1/1	./.	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1
+3	19086741	SNP-3.19085500.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.227-226A>G|300|LOC_Os03g33380|protein_coding|CODING|LOC_Os03g33380.1|1|1)	GT	./.	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	./.	1/1	./.	1/1	0/0	./.	1/1	0/0	1/1	1/1	./.	./.	./.	./.	1/1	./.	./.	./.	./.	./.	1/1	0/0	./.	1/1	./.	1/1	./.	1/1	0/0	1/1	0/0	0/0	./.	./.	1/1	1/1	./.	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	1/1	./.	./.	1/1	./.	0/0	0/0	1/1	0/0	1/1	./.	1/1	1/1	./.	./.	./.	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	./.	0/0	./.	./.	1/1	./.	0/0	./.	./.	0/0	1/1	0/0	0/0	1/1	0/0	./.	1/1	0/0	./.	./.	./.	./.	./.	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	./.	0/0	0/0	1/1	1/1	./.	./.	1/1	./.	0/0	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	./.	0/0	1/1
+3	19087267	SNP-3.19086026.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cAt/cGt|p.His176Arg/c.527A>G|300|LOC_Os03g33380|protein_coding|CODING|LOC_Os03g33380.1|2|1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/1	1/1	0/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1
+3	19087338	SNP-3.19086097.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Ctg/Atg|p.Leu200Met/c.598C>A|300|LOC_Os03g33380|protein_coding|CODING|LOC_Os03g33380.1|2|1)	GT	0/1	1/1	0/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/1	1/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	0/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/1	1/1	0/0	0/0	0/0	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/1	./.	0/0	1/1	1/1	0/0
+3	19087621	SNP-3.19086380.	C	A	.	.	PR;EFF=synonymous_variant(LOW||aAc/aAc|p.Asn294Asn/c.881C>A|300|LOC_Os03g33380|protein_coding|CODING|LOC_Os03g33380.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	1/1	0/0	1/1	0/0	./.	./.	1/1	1/1	./.	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	./.	./.	./.	./.	./.	0/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	./.	./.	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	./.	1/1	0/0	./.	./.	0/1	./.	0/0	0/0	0/0	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	./.	./.	./.	./.	0/0	0/0
+3	19089509	SNP-3.19088268.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	1/1	0/0	0/0	./.	1/1	1/1	./.	./.	0/0	./.	0/0	./.	0/0	1/1	./.	1/1	0/0	0/0	./.	0/0	./.	./.	1/1	0/0	./.	1/1	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	1/1	1/1	./.	./.	1/1	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	./.
+3	19092918	SNP-3.19091677.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	./.	0/0
+3	19095009	SNP-3.19093768.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	1/1	./.	./.	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/1	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/1	1/1	1/1	1/1	0/0	0/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1
+3	19096319	SNP-3.19095078.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/0	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	1/1	0/0	0/1	1/1	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0
+3	19097885	SNP-3.19096644.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Gga/Cga|p.Gly70Arg/c.208T>C|198|LOC_Os03g33400|protein_coding|CODING|LOC_Os03g33400.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	./.	0/0	0/0	1/1	./.	./.	./.	0/0	0/0	1/1	./.	./.	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	./.	./.	./.	0/0	./.	1/1	1/1	./.	1/1	./.	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	0/0	./.	./.	./.	./.	./.	1/1	1/1	./.	./.	1/1	0/0	./.	1/1	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	1/1	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	./.	./.	./.	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.
+3	19097980	SNP-3.19096739.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gGa/gCa|p.Gly38Ala/c.113T>C|198|LOC_Os03g33400|protein_coding|CODING|LOC_Os03g33400.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	./.	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	1/1	./.	1/1	1/1	0/0	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	./.	1/1	./.	1/1	./.	1/1	./.	./.	1/1	./.	1/1	1/1	./.	1/1	./.	0/0	./.	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	./.	./.	1/1	./.	./.	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	1/1	./.	./.	./.	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	./.	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	./.	0/0	1/1	./.	./.	1/1
+3	19103719	SNP-3.19102478.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	./.	./.	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	./.	./.	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	./.	0/0
+3	19104084	SNP-3.19102843.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	1/1	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	1/1	./.	./.	1/1	0/0	1/1	1/1	0/0	1/1	./.	./.	1/1	0/0	./.	1/1	./.	0/0	./.	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	./.	./.	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	./.	1/1	0/0	./.	./.	./.	1/1	./.	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	1/1	./.	1/1	./.	./.	./.	0/0	./.	./.	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	./.	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.
+3	19104548	SNP-3.19103307.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ctC/ctA|p.Leu44Leu/c.132C>A|190|LOC_Os03g33430|protein_coding|CODING|LOC_Os03g33430.1|1|1)	GT	./.	1/1	0/1	1/1	0/1	./.	0/0	1/1	1/1	1/1	0/0	./.	./.	0/0	0/0	1/1	./.	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/1	./.	0/0	./.	./.	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	1/1	0/1	0/1	./.	0/0	0/0	0/1	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	./.	0/0	0/0	./.	0/0
+3	19105632	SNP-3.19104391.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	1/1	0/0	./.	1/1	1/1	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/1	1/1	./.	0/0	./.	0/0	0/1	1/1	1/1	1/1	./.	0/0	0/0	./.	1/1	0/0	./.	1/1	./.	1/1	./.	./.	1/1	1/1	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0
+3	19107776	SNP-3.19106535.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	1/1	0/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	./.	0/0	0/1	0/0	0/0	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0
+3	19107792	SNP-3.19106551.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/1	0/0	0/1	0/0	0/0	0/1	0/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19110031	SNP-3.19108790.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	./.	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	./.	0/0	0/0	1/1	./.	1/1	./.	./.	./.	1/1	./.	1/1	1/1	1/1	0/0	./.	1/1	./.	./.	1/1	0/0	1/1	1/1	1/1	./.	0/0	./.	./.	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	./.	1/1	./.	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1	./.	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1
+3	19111719	SNP-3.19110478.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/1	0/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	./.	0/0	./.	0/0	0/0	1/1	0/0
+3	19112213	SNP-3.19110972.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	./.	1/1	./.	0/0	./.	./.	0/0	./.	0/0	1/1	1/1	./.	1/1	./.	0/0	./.	./.	0/0	1/1	0/0	./.	1/1	./.	./.	0/0	0/0	./.	./.	0/0	0/0	./.	1/1	./.	0/0	1/1	./.	0/0	./.	1/1	1/1	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	./.	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	./.	./.	./.	0/0	./.	0/0	1/1	./.	./.	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	./.	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	./.	1/1	./.	1/1	1/1	1/1	./.	./.	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1
+3	19113142	SNP-3.19111901.	C	A	.	.	PR;EFF=splice_acceptor_variant(HIGH|||c.293C>A|147|LOC_Os03g33450|protein_coding|CODING|LOC_Os03g33450.1|3|1),intron_variant(MODIFIER|||c.293-1C>A|147|LOC_Os03g33450|protein_coding|CODING|LOC_Os03g33450.1|2|1);LOF=(LOC_Os03g33450|LOC_Os03g33450|1|1.00)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	0/0	./.	0/0	0/0	0/1	0/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	./.	0/0	0/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0
+3	19113904	SNP-3.19112663.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	19114865	SNP-3.19113624.	C	A	.	.	PR;EFF=splice_region_variant(LOW|||c.873G>T|487|LOC_Os03g33460|protein_coding|CODING|LOC_Os03g33460.1|6|1),intron_variant(MODIFIER|||c.873-7G>T|487|LOC_Os03g33460|protein_coding|CODING|LOC_Os03g33460.1|6|1)	GT	0/0	1/1	0/0	./.	./.	0/0	./.	./.	1/1	./.	./.	0/0	0/0	0/0	./.	./.	./.	0/0	1/1	./.	0/0	1/1	./.	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	./.	./.	0/0	./.	1/1	./.	1/1	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	./.	0/0	1/1	1/1	./.	0/0	./.	0/0	./.	./.	./.	./.	./.	0/0	0/0	./.	./.	0/0	./.	1/1	./.	./.	1/1	./.	1/1	1/1	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	./.	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	1/1	./.	./.	./.	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	19116045	SNP-3.19114804.	C	A	.	.	PR;EFF=synonymous_variant(LOW||aTg/aTg|p.Met229Met/c.686G>T|487|LOC_Os03g33460|protein_coding|CODING|LOC_Os03g33460.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	1/1	0/1	1/1	1/1	./.	0/0	1/1	0/0	./.	1/1	./.	./.	./.	0/0	0/0	./.	./.	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19119983	SNP-3.19118742.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	./.	./.	0/0	./.	./.	./.	./.	1/1	0/0	./.	./.	./.	./.	1/1	./.	1/1	./.	./.	./.	0/0	1/1	0/0	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	./.	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	./.	0/0	1/1	./.	0/0	1/1	1/1	./.	1/1	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0
+3	19120835	SNP-3.19119594.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	./.	0/0	0/1	0/0	1/1	0/1	./.	0/0	0/1	0/0	0/1	0/0	1/1	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	0/0	./.	./.	0/0	./.	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	1/1	./.	./.	0/0	0/1	0/0	0/0	0/1	./.	0/0	1/1	1/1	0/1	1/1	1/1	./.	0/1	1/1	0/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/1	0/0
+3	19120968	SNP-3.19119727.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/1	./.	./.	0/0	1/1	0/0	0/0	./.	1/1	0/1	./.	./.	0/0	1/1	./.	0/1	./.	1/1	./.	1/1	./.	0/0	0/1	0/0	1/1	0/0	./.	0/0	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	0/1	./.	1/1	1/1	1/1	./.	1/1	0/1	1/1	0/1	1/1	./.	0/0	./.	0/0	1/1	./.	1/1	1/1	0/1	1/1	0/1	./.	./.	./.	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	./.	0/0	1/1	./.	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	./.	0/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	./.	0/0	./.	./.	./.	0/1	1/1	0/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	1/1	1/1	./.	0/0	1/1
+3	19123027	SNP-3.19121786.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	./.	0/0	./.	1/1	0/0	0/0	1/1	./.	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	./.	./.	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	0/0	./.	0/0	./.	./.	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	./.	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	./.	./.	./.	./.	./.	./.	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	0/0	0/0
+3	19123074	SNP-3.19121833.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	./.	1/1	1/1	1/1	./.	./.	./.	1/1	0/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/1	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/1	./.	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	./.	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	./.	1/1	1/1	0/0	0/0
+3	19124647	SNP-3.19123406.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	./.	1/1	./.	1/1	./.	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	./.	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0
+3	19125149	SNP-3.19123908.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	0/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19127054	SNP-3.19125813.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/1	./.	./.	0/0	1/1	./.	./.	1/1	./.	1/1	./.	0/0	1/1	./.	0/1	1/1	0/0	./.	0/0	0/0	./.	./.	./.	1/1	./.	./.	1/1	./.	./.	0/0	0/1	1/1	1/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	1/1	./.	0/0	./.	./.	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	./.	./.	0/0	./.	0/0	0/0	./.	0/0	./.	1/1	0/0	0/1	./.	./.	./.	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	./.	0/0	1/1	./.	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	./.	0/0	1/1	1/1	./.	./.	./.	0/0	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	./.
+3	19127791	SNP-3.19126550.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Ctg/Gtg|p.Leu134Val/c.400A>G|268|LOC_Os03g33480|protein_coding|CODING|LOC_Os03g33480.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	1/1	0/0	0/1	1/1	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/1	0/1	0/0	1/1	0/0	0/0	1/1	./.	./.	0/1	0/1	1/1	./.	0/1	1/1	0/1	1/1	1/1	1/1	1/1	0/1	0/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/1	0/1	./.	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/1	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/1	0/0	0/1	0/0	0/0	0/1	1/1	./.	0/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0
+3	19127952	SNP-3.19126711.	A	G	.	.	PR;EFF=stop_gained(HIGH|NONSENSE|taT/taG|p.Tyr187*/c.561A>G|268|LOC_Os03g33480|protein_coding|CODING|LOC_Os03g33480.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	19128108	SNP-3.19126867.	C	A	.	.	PR;EFF=synonymous_variant(LOW||aaA/aaA|p.Lys239Lys/c.717C>A|268|LOC_Os03g33480|protein_coding|CODING|LOC_Os03g33480.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	./.	0/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/1	./.	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0
+3	19128197	SNP-3.19126956.	C	A	.	.	PR;EFF=stop_retained_variant(LOW||tAg/tAg|p.Ter269Ter/c.806C>A|268|LOC_Os03g33480|protein_coding|CODING|LOC_Os03g33480.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	./.	1/1	./.	1/1	0/0	./.	./.	./.	./.	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	./.	1/1	1/1	./.	0/0	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	1/1	1/1	0/0	./.	0/0	./.	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	./.	./.	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.
+3	19128237	SNP-3.19126996.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	./.	./.	0/1	0/0	./.	0/0	./.	0/1	./.	./.	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	./.	./.	0/0	./.	0/0	0/1	0/0	0/0	./.	0/0	./.	0/1	0/0	1/1	1/1	1/1	0/0	0/1	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	./.	./.	./.	./.	./.	./.	./.	0/0	./.	0/0	./.	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/1
+3	19128315	SNP-3.19127074.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	19129577	SNP-3.19128336.	C	A	.	.	PR;EFF=splice_region_variant(LOW|||c.201G>T|118|LOC_Os03g33490|protein_coding|CODING|LOC_Os03g33490.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),synonymous_variant(LOW|SILENT|acA/acT|p.Thr67Thr/c.201G>T|118|LOC_Os03g33490|protein_coding|CODING|LOC_Os03g33490.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	1/1	0/0	1/1	./.	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	./.	1/1	1/1	./.	./.	./.	0/0	0/0	./.	./.	1/1	0/0	1/1	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	./.	0/0	0/0	./.	0/0	./.	./.	1/1	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	./.	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	1/1	0/0	./.	1/1	0/0
+3	19129604	SNP-3.19128363.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ctG/ctT|p.Leu58Leu/c.174G>T|118|LOC_Os03g33490|protein_coding|CODING|LOC_Os03g33490.1|1|1)	GT	0/0	1/1	0/0	1/1	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/1	0/0	0/0	0/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/1	0/1	1/1	0/0
+3	19129676	SNP-3.19128435.	A	G	.	.	PR;EFF=synonymous_variant(LOW||ctC/ctC|p.Leu34Leu/c.102T>C|118|LOC_Os03g33490|protein_coding|CODING|LOC_Os03g33490.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	./.	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	./.	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	19130100	SNP-3.19128859.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	0/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	1/1	0/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	19130299	SNP-3.19129058.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	1/1	1/1	0/1	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	19133639	SNP-3.19132398.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	0/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	./.	0/0	./.	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1	./.	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	1/1	0/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/1	1/1	0/0	1/1
+3	19136653	SNP-3.19135412.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/0	./.	0/0	0/0	1/1	0/0
+3	19136855	SNP-3.19135614.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1
+3	19137832	SNP-3.19136591.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	19138983	SNP-3.19137742.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/1	1/1	./.	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	0/0	0/0	./.	0/1	0/0	0/1	./.	0/0	0/1	0/0	./.	0/0	0/1	./.	0/0	0/0	0/0	1/1	0/0	0/1	0/1	0/1	1/1	./.	0/0	0/1	0/0	0/0	./.	./.	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/1	1/1	0/1	1/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0
+3	19139036	SNP-3.19137795.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	./.	0/0	0/0	1/1	./.	./.	0/0	1/1	0/0	0/0	./.	./.	./.	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	./.	1/1	./.	0/0	./.	./.	./.	./.	./.	0/0	1/1	./.	./.	1/1	./.	./.	./.	./.	./.	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	./.	./.	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	1/1	./.	./.	0/0	0/0	1/1	./.	1/1	./.	0/0	./.	./.	./.	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	./.
+3	19139491	SNP-3.19138250.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0
+3	19142199	SNP-3.19140958.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.406+192G>T|746|LOC_Os03g33500|protein_coding|CODING|LOC_Os03g33500.1|2|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0
+3	19142346	SNP-3.19141105.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.406+45G>T|746|LOC_Os03g33500|protein_coding|CODING|LOC_Os03g33500.1|2|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/1	0/0	1/1	0/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/1	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	19142467	SNP-3.19141226.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ccA/ccT|p.Pro110Pro/c.330G>T|746|LOC_Os03g33500|protein_coding|CODING|LOC_Os03g33500.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19142663	SNP-3.19141422.	A	G	.	.	PR;EFF=synonymous_variant(LOW||aCa/aCa|p.Thr45Thr/c.134T>C|746|LOC_Os03g33500|protein_coding|CODING|LOC_Os03g33500.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/0	1/1	0/1	./.	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/1	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	./.	./.	./.	0/0	./.	0/0	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/1	0/1	1/1
+3	19144676	SNP-3.19143435.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	19145269	SNP-3.19144028.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gCg/gAg|p.Ala37Glu/c.110C>A|50|LOC_Os03g33509|protein_coding|CODING|LOC_Os03g33509.1|1|1),splice_region_variant(LOW|||c.110C>A|50|LOC_Os03g33509|protein_coding|CODING|LOC_Os03g33509.1|1|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0
+3	19145523	SNP-3.19144282.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	./.	./.	1/1	1/1	0/0	0/0	0/0	./.	0/1	./.	./.	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/1	1/1	1/1	0/1	1/1	1/1	./.	./.	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	0/1	./.	./.	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	1/1	0/0	1/1
+3	19146331	SNP-3.19145090.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	./.	1/1	0/1	0/0	0/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/1	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/1	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19149086	SNP-3.19147845.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	./.	1/1	./.	0/0	1/1	1/1	./.	0/0	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1
+3	19149479	SNP-3.19148238.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	1/1	0/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	1/1	0/1	0/1	1/1	0/1	0/0	0/0	0/1	1/1	0/0	0/1	0/1	./.	0/1	0/0	0/1	1/1	./.	1/1	1/1	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	./.	0/1	./.	0/1	0/0	0/0	1/1	0/0
+3	19149706	SNP-3.19148465.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	./.	1/1	./.	0/1	./.	1/1	1/1	1/1	./.	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/1	./.	0/0	0/0	0/0	./.	0/0	0/1	1/1	./.	./.	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/1	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/1	./.	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/1	./.	0/1	0/0	0/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	1/1	./.	0/0	1/1	./.	./.	./.	0/0	1/1	./.	./.	0/0	./.	./.	0/0	./.	0/1	1/1	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	./.	./.	0/0	1/1	0/0
+3	19151296	SNP-3.19150055.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/1	./.	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	1/1	./.	0/0	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19156140	SNP-3.19154899.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|caT/caC|p.His1399His/c.4197T>C|2027|LOC_Os03g33530|protein_coding|CODING|LOC_Os03g33530.1|3|1)	GT	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/1	./.	./.	1/1	./.	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1
+3	19158048	SNP-3.19156807.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Cct/Tct|p.Pro812Ser/c.2434G>T|2027|LOC_Os03g33530|protein_coding|CODING|LOC_Os03g33530.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/1	./.	0/0	0/0	./.	./.	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/1	0/0	./.	./.	0/0	./.	0/0	./.	./.	./.	./.	1/1	./.	1/1	0/1	./.	1/1	1/1	0/1	./.	./.	0/0	0/0	0/0	./.	./.	0/1	0/0	./.	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0
+3	19158432	SNP-3.19157191.	C	A	.	.	PR;EFF=splice_acceptor_variant(HIGH|||c.2052G>T|2027|LOC_Os03g33530|protein_coding|CODING|LOC_Os03g33530.1|2|1),intron_variant(MODIFIER|||c.2052-2G>T|2027|LOC_Os03g33530|protein_coding|CODING|LOC_Os03g33530.1|1|1);LOF=(LOC_Os03g33530|LOC_Os03g33530|1|1.00)	GT	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	./.	0/1	./.	0/0	1/1	./.	0/1	1/1	1/1	1/1	1/1	0/1	./.	0/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/1	./.	1/1	0/1	0/0	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	19165258	SNP-3.19164017.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	./.	1/1	0/1	1/1	0/0	./.	1/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	./.	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	0/1	1/1	0/1	1/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/1	0/0	1/1
+3	19165316	SNP-3.19164075.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	./.	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/1	0/1	./.	1/1	1/1	0/1	0/0	1/1	./.	0/0	./.	./.	0/0	0/1	./.	./.	1/1	0/0	0/0	./.	0/0	0/0	./.	0/1	0/0	0/0	0/1	0/0	./.	0/0	0/1	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/1	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	./.	0/0	0/0	./.	0/0	0/1	0/0	./.	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	./.	1/1	1/1	0/0
+3	19169014	SNP-3.19167773.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	1/1	1/1	0/0	1/1	./.	1/1	./.	1/1	./.	0/0	./.	1/1	0/0	1/1	./.	./.	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/1	./.	1/1	./.	0/0	./.	./.	./.	./.	1/1	0/0	./.	0/1	./.	./.	1/1	0/0	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	0/1	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	./.	1/1	1/1	./.	./.	./.	1/1	./.	./.	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	1/1	0/0	./.
+3	19172308	SNP-3.19171067.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	./.	0/0	1/1	1/1	0/0	1/1	0/0	./.	./.	0/0	0/0	1/1	./.	1/1	1/1	0/1	1/1	0/0	0/0	0/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	1/1	1/1	./.	./.	1/1	1/1	./.	0/0	0/0	./.	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.
+3	19177904	SNP-3.19176663.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	./.	1/1	./.	./.	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	./.	1/1	1/1	0/0	1/1	1/1	0/0	1/1	./.	./.	./.	./.	1/1	./.	0/0	0/0	./.	./.	1/1	0/0	1/1	0/0	./.	1/1	./.	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	./.	0/0	./.	1/1	./.	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	./.	1/1	./.	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	1/1	./.	./.	1/1	0/0	1/1	1/1	./.	1/1	0/0	./.	1/1	./.	0/0	./.	1/1	0/0	./.	./.	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1
+3	19178113	SNP-3.19176872.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/1	./.	./.	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/1	0/0
+3	19178400	SNP-3.19177159.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	./.	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	./.	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	0/0	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	1/1	0/0
+3	19178485	SNP-3.19177244.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/1	0/0	0/0	1/1	./.	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0
+3	19178506	SNP-3.19177265.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/1	0/0	0/0	1/1	./.	0/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0
+3	19181841	SNP-3.19180600.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	./.	./.	1/1	1/1	0/0	./.	./.	./.	1/1	1/1	0/0	./.	0/0	1/1	1/1	./.	./.	./.	0/0	0/0	1/1	0/0	0/0	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	19181864	SNP-3.19180623.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/1	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	./.	./.	0/1	1/1	./.	1/1	0/1	0/0	./.	./.	0/1	1/1	0/0	0/0	0/1	0/1	0/0	./.	0/1	0/1	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	./.	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	./.	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	1/1	0/1	0/1	0/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/1	1/1	0/0	1/1	0/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	./.	0/0	1/1	./.	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	./.	1/1	0/0	1/1
+3	19193977	SNP-3.19192736.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	./.	1/1	0/1	0/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	./.	1/1	0/0	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	./.	0/0	./.	0/1	0/1	./.	0/0	0/1	1/1	0/0	./.	1/1	0/0	1/1	./.	0/0	1/1	0/0	./.	./.	0/1	0/1	./.	0/1	0/0	1/1	0/1	0/0	./.	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/1	1/1	0/0
+3	19194196	SNP-3.19192955.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	19194737	SNP-3.19193496.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	19198829	SNP-3.19197588.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.1222-611T>C|448|LOC_Os03g33590|protein_coding|CODING|LOC_Os03g33590.1|11|1),intron_variant(MODIFIER|||c.1222-611T>C|440|LOC_Os03g33590|protein_coding|CODING|LOC_Os03g33590.2|11|1)	GT	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0
+3	19204549	SNP-3.19203308.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	0/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	19207080	SNP-3.19205839.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.219-95G>T|308|LOC_Os03g33600|protein_coding|CODING|LOC_Os03g33600.1|1|1)	GT	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	0/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0
+3	19207198	SNP-3.19205957.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.219-213T>C|308|LOC_Os03g33600|protein_coding|CODING|LOC_Os03g33600.1|1|1)	GT	./.	0/0	./.	0/0	1/1	0/1	./.	0/0	0/0	0/0	1/1	./.	0/0	./.	./.	0/0	1/1	1/1	0/0	1/1	0/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	./.	./.	1/1	./.	1/1	1/1	./.	0/0	0/0	1/1	0/1	1/1	1/1	./.	./.	1/1	./.	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	1/1	0/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	./.	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/1	0/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	./.	./.	1/1	0/0	0/1	1/1	1/1	./.	./.	./.	0/0	0/0	./.	0/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1
+3	19207283	SNP-3.19206042.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.219-298G>T|308|LOC_Os03g33600|protein_coding|CODING|LOC_Os03g33600.1|1|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	19207843	SNP-3.19206602.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.218+338G>T|308|LOC_Os03g33600|protein_coding|CODING|LOC_Os03g33600.1|1|1)	GT	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	./.	1/1	0/0	1/1	1/1	./.	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	1/1	0/1	1/1	0/0	0/1	0/0	0/0	./.	1/1	0/0	./.	0/0	1/1	0/1	1/1	./.	1/1	0/0	0/0	./.	1/1	0/0	1/1	0/1	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19210587	SNP-3.19209346.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	19213861	SNP-3.19212620.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/1	1/1	1/1	0/1	1/1	0/1	0/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/1	1/1	1/1	0/1	1/1	0/1	1/1	0/0	./.	0/1	0/1	0/0	1/1	0/0	1/1	0/1	0/1	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/1	0/1	0/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/1	1/1	0/1	1/1	./.	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	1/1	./.	1/1
+3	19214991	SNP-3.19213750.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	1/1	0/0	./.	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/1	./.	1/1	0/0	0/1	./.	0/0	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/1	0/0	./.	0/0	0/0	0/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	./.	0/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1
+3	19217756	SNP-3.19216515.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	0/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	./.	0/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/1	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/1	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19217918	SNP-3.19216677.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	0/0	./.	0/0	0/1	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	./.	1/1	0/0	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	./.	0/0	1/1	./.	./.	0/0	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	./.	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	./.	./.	1/1	0/0
+3	19218405	SNP-3.19217164.	C	A	.	.	PR;EFF=stop_lost(HIGH|MISSENSE|tAg/tTg|p.Ter122Leuext*?/c.365G>T|121|LOC_Os03g33620|protein_coding|CODING|LOC_Os03g33620.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/1	./.	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	./.	1/1	0/1	./.	0/0	1/1	0/0	1/1	./.	1/1	1/1	./.	./.	0/0	0/1	0/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	./.	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	./.	0/1	0/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/1	0/0
+3	19218540	SNP-3.19217299.	C	A	.	.	PR;EFF=synonymous_variant(LOW||aTg/aTg|p.Met77Met/c.230G>T|121|LOC_Os03g33620|protein_coding|CODING|LOC_Os03g33620.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19222783	SNP-3.19221542.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	./.	0/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	1/1	1/1	0/1	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	./.	1/1	0/1	0/1	0/0	1/1	1/1	0/1	./.	1/1	1/1	0/1	0/1	1/1	0/0	1/1	1/1	0/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	./.	0/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	0/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1
+3	19223361	SNP-3.19222120.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	./.	1/1	./.	1/1	./.	0/0	0/1	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	./.	0/0	1/1	./.	1/1	0/0	./.	0/0	1/1	./.	1/1	1/1	./.	1/1	0/1	1/1	./.	./.	1/1	1/1	1/1	./.	0/1	./.	./.	./.	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	./.	0/0	0/1	1/1	0/0	1/1	0/0	1/1	1/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	./.	1/1	./.	1/1	1/1	0/1	0/1	1/1	./.	0/0	./.	0/0	0/1	./.	0/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	./.	./.	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	./.	1/1	0/0	./.
+3	19225307	SNP-3.19224066.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	0/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/1	1/1	./.	1/1	0/0	./.	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19238836	SNP-3.19237595.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/1	0/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/1	./.	0/0	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	./.	0/1	0/1	./.	0/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	./.	0/1	0/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	0/1	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19238905	SNP-3.19237664.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	./.	1/1	./.	./.	0/0	./.	./.	1/1	./.	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	./.	./.	./.	./.	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	./.	./.	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	./.	0/0	0/0	1/1	./.	0/0	./.	./.	1/1	./.	./.	1/1	1/1	./.	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19241250	SNP-3.19240009.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/0	0/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/1	1/1	1/1	0/1	0/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0
+3	19243170	SNP-3.19241929.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	./.	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	./.	./.	1/1	1/1	./.	0/0	1/1	./.	0/0	./.	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	./.	1/1	1/1	0/0	1/1	1/1	./.	./.	1/1	./.	./.	./.	1/1	0/0	1/1	0/1	./.	0/0	./.	0/0	./.	0/1	1/1	1/1	./.	0/0	1/1	./.	0/0	1/1	./.	1/1	1/1	0/1	./.	./.	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	0/0	1/1	1/1	./.	./.	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/1	1/1	0/0	./.	1/1	1/1	./.	0/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	./.	1/1	./.	./.	0/0	./.	./.	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	./.	0/0	1/1
+3	19243554	SNP-3.19242313.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19246770	SNP-3.19245529.	A	G	.	.	PR;EFF=synonymous_variant(LOW||tcG/tcG|p.Ser585Ser/c.1755A>G|1048|LOC_Os03g33650|protein_coding|CODING|LOC_Os03g33650.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	1/1	1/1	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	19247694	SNP-3.19246453.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ccG/ccA|p.Pro893Pro/c.2679C>A|1048|LOC_Os03g33650|protein_coding|CODING|LOC_Os03g33650.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19247862	SNP-3.19246621.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ctG/ctA|p.Leu949Leu/c.2847C>A|1048|LOC_Os03g33650|protein_coding|CODING|LOC_Os03g33650.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19248594	SNP-3.19247353.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19248842	SNP-3.19247601.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19248864	SNP-3.19247623.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19248886	SNP-3.19247645.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19251900	SNP-3.19250659.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/1	1/1	0/0	0/0	0/0	0/0	0/1	./.	0/0	./.	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/1	./.	0/0	./.	1/1	./.	0/0	0/0	1/1	0/0	./.	./.	1/1	./.	0/0	./.	0/0	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	1/1	./.	./.	1/1	0/0
+3	19251932	SNP-3.19250691.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/1	0/1	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/1	0/0	1/1	1/1	1/1	1/1	0/1	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0
+3	19252276	SNP-3.19251035.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/1	1/1	0/1	0/1	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/1	1/1	0/0	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/1	0/0	./.	1/1	1/1	1/1	1/1	0/1	0/0	0/0	1/1	0/1	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/1	0/0	./.	./.	1/1	0/1	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/1
+3	19253417	SNP-3.19252176.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	0/0	1/1	1/1	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	1/1	1/1	./.	./.	0/1	1/1	0/1	./.	1/1	0/0	1/1	0/1	0/1	0/0	0/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	1/1	./.	0/0	./.	1/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	./.	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/1	0/0	1/1
+3	19256045	SNP-3.19254804.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	./.	./.	./.	0/0	./.	./.	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19257814	SNP-3.19256573.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gTt/gGt|p.Val15Gly/c.44A>G|356|LOC_Os03g33670|protein_coding|CODING|LOC_Os03g33670.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	./.	1/1	./.	0/0	./.	1/1	./.	./.	0/0	./.	0/0	./.	1/1	./.	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	1/1	0/0	0/0	1/1	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	./.	./.	1/1	./.	./.	1/1	1/1	./.	0/0	./.	1/1	1/1	./.	./.	0/0	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0
+3	19258481	SNP-3.19257240.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.626-50C>A|356|LOC_Os03g33670|protein_coding|CODING|LOC_Os03g33670.1|1|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	0/0	1/1	./.	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	./.	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	./.	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	19264529	SNP-3.19263288.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.1340+59A>G|1149|LOC_Os03g33680|protein_coding|CODING|LOC_Os03g33680.1|4|1)	GT	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/0	./.	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	./.	0/0	./.	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/1	1/1	./.	0/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	19265090	SNP-3.19263849.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ctG/ctA|p.Leu573Leu/c.1719C>A|1149|LOC_Os03g33680|protein_coding|CODING|LOC_Os03g33680.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	1/1	0/0	1/1	0/1	./.	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/1	1/1	./.	0/0	1/1	0/1	0/0	./.	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	./.	./.	1/1	1/1	0/1	0/0	./.	0/0	./.	0/0	./.	1/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	./.	1/1	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	19266201	SNP-3.19264960.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gaC/gaG|p.Asp905Glu/c.2715A>G|1149|LOC_Os03g33680|protein_coding|CODING|LOC_Os03g33680.1|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	1/1	0/1	0/1	0/0	0/1	0/0	0/1	1/1	0/0	0/0	1/1	0/1	0/1	0/1	./.	./.	./.	0/1	./.	0/1	0/1	1/1	0/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	./.	0/1	0/1	./.	1/1	1/1	1/1	1/1	0/0	0/1	0/0	1/1	1/1	1/1	0/1	0/1	0/0	1/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	./.	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	1/1	./.	0/1	0/1	0/0	0/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/1	0/0	1/1	./.	0/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	1/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	./.	0/1	./.	0/1	1/1	1/1	./.	0/1	./.	1/1	./.	1/1	1/1	1/1	./.	./.	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1
+3	19266413	SNP-3.19265172.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gTa/gAa|p.Val976Glu/c.2927C>A|1149|LOC_Os03g33680|protein_coding|CODING|LOC_Os03g33680.1|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	./.	1/1	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	0/0	1/1	0/0	./.	./.	./.	./.	1/1	0/0	0/1	1/1	1/1	0/1	0/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	1/1	0/0
+3	19266618	SNP-3.19265377.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ggT/ggA|p.Gly1044Gly/c.3132C>A|1149|LOC_Os03g33680|protein_coding|CODING|LOC_Os03g33680.1|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	0/1	0/1	0/1	1/1	0/1	0/1	1/1	1/1	1/1	0/1	0/1	0/1	./.	0/0	1/1	./.	1/1	./.	1/1	./.	0/1	0/0	./.	./.	0/1	0/1	1/1	0/0	0/0	0/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19271202	SNP-3.19269961.	C	A	.	.	PR;EFF=splice_region_variant(LOW|||c.2116C>A|749|LOC_Os03g33690|protein_coding|CODING|LOC_Os03g33690.1|6|1),synonymous_variant(LOW|SILENT|Cgg/Agg|p.Arg706Arg/c.2116C>A|749|LOC_Os03g33690|protein_coding|CODING|LOC_Os03g33690.1|6|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0
+3	19273141	SNP-3.19271900.	C	A	.	.	PR;EFF=synonymous_variant(LOW||ctT/ctT|p.Leu365Leu/c.1095G>T|606|LOC_Os03g33700|protein_coding|CODING|LOC_Os03g33700.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	./.	./.	1/1	0/0	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	./.	1/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0
+3	19281719	SNP-3.19280478.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.51+15G>T|699|LOC_Os03g33730|protein_coding|CODING|LOC_Os03g33730.1|1|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/1	0/0	./.	./.	0/1	1/1	./.	1/1	1/1	./.	./.	0/1	1/1	1/1	./.	0/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/1	0/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/1	0/0
+3	19282070	SNP-3.19280829.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/1	./.	1/1	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	./.	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/1	0/1	0/0	0/1	0/1	./.	0/1	1/1	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	./.	1/1	./.	0/1	0/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	1/1
+3	19283750	SNP-3.19282509.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	./.	./.	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	0/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/1	1/1	0/0	1/1	./.	0/1	0/1	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0
+3	19284115	SNP-3.19282874.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	./.	./.	1/1	0/0	./.	1/1	1/1	1/1	./.	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	0/0	./.	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	./.	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	./.	1/1	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	./.	./.	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0
+3	19284183	SNP-3.19282942.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	./.	0/0	./.	0/1	0/1	0/0	0/0	0/0	./.	./.	1/1	./.	./.	0/0	0/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	./.	./.	1/1	1/1	1/1	0/1	1/1	./.	./.	0/1	0/0	./.	1/1	./.	1/1	./.	./.	1/1	0/1	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	0/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	./.	1/1	./.	./.	1/1	0/1	1/1	0/1	./.	./.	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	./.	./.	./.	0/1	0/0	./.	1/1	0/0	./.	0/0	1/1	1/1	0/0	./.	./.	./.	./.	0/0	1/1	./.	./.	0/0	./.	1/1	./.	0/0	./.	0/0	1/1	./.	0/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1
+3	19284232	SNP-3.19282991.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/1	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/0	1/1	0/0
+3	19287495	SNP-3.19286254.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gGa/gAa|p.Gly6Glu/c.17C>A|726|LOC_Os03g33740|protein_coding|CODING|LOC_Os03g33740.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),splice_region_variant(LOW|||c.17C>A|726|LOC_Os03g33740|protein_coding|CODING|LOC_Os03g33740.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	./.	./.	0/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/1	0/0	0/1	./.	0/0	1/1	0/0	0/0	1/1	0/1	0/0	1/1	0/1	1/1	0/0	0/0	1/1	./.	0/0	./.	./.	0/0	0/0	0/0	0/1	1/1	./.	./.	0/0	1/1	0/0	1/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0
+3	19287814	SNP-3.19286573.	C	A	.	.	PR;EFF=synonymous_variant(LOW||Aag/Aag|p.Lys73Lys/c.217C>A|726|LOC_Os03g33740|protein_coding|CODING|LOC_Os03g33740.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/1	0/0	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/1	0/0	0/1	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/0	1/1	0/1	0/1	0/1	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	./.	0/0	1/1	0/0
+3	19288045	SNP-3.19286804.	C	A	.	.	PR;EFF=synonymous_variant(LOW||Agt/Agt|p.Ser150Ser/c.448C>A|726|LOC_Os03g33740|protein_coding|CODING|LOC_Os03g33740.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	1/1	0/0	0/0	0/1	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/0	./.	0/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	19288594	SNP-3.19287353.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cCg/cAg|p.Pro275Gln/c.824C>A|726|LOC_Os03g33740|protein_coding|CODING|LOC_Os03g33740.1|3|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	./.	./.	./.	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	19289149	SNP-3.19287908.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aCa/aAa|p.Thr434Lys/c.1301C>A|726|LOC_Os03g33740|protein_coding|CODING|LOC_Os03g33740.1|4|1)	GT	0/0	1/1	0/0	1/1	0/0	0/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/1	0/0	0/1	0/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0	./.	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/1	0/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	./.	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/1	./.	0/1	0/1	0/1	0/0	0/0	0/1	0/1	0/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/1	0/0	1/1	0/0
+3	19289418	SNP-3.19288177.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Cat/Aat|p.His524Asn/c.1570C>A|726|LOC_Os03g33740|protein_coding|CODING|LOC_Os03g33740.1|4|1)	GT	0/0	./.	0/0	1/1	0/0	0/0	./.	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	./.	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	1/1	./.	1/1	0/0	./.	./.	./.	./.	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	./.	1/1	1/1	./.	./.	0/0	1/1	1/1	./.	0/0	./.	1/1	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	0/0	1/1	1/1	0/0	0/0	./.	1/1	1/1	0/0
+3	19289684	SNP-3.19288443.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aaT/aaG|p.Asn560Lys/c.1680A>G|726|LOC_Os03g33740|protein_coding|CODING|LOC_Os03g33740.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	./.	0/0	1/1	0/0	1/1	./.	1/1	./.	1/1	./.	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	1/1	./.	1/1	./.	./.	1/1	0/0	0/0	1/1	./.	./.	0/0	./.	./.	1/1	./.	./.	0/0	0/0	0/0	./.	1/1	0/0	1/1	./.	1/1	1/1	./.	./.	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	./.	1/1	1/1	1/1	./.	./.	0/0	./.	./.	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	./.	0/0	./.	1/1	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	1/1	./.	./.	1/1	0/0	1/1	./.	1/1	0/0	1/1	./.	0/0	./.	1/1	./.	./.	./.	1/1	1/1	1/1	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.
+3	19292046	SNP-3.19290805.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	./.	0/0	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/1	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/1	1/1	./.	0/0	./.	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	./.	./.	./.	0/0	1/1	0/1	1/1	./.	1/1	0/0	0/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	0/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	19294696	SNP-3.19293206.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|tCt/tAt|p.Ser119Tyr/c.356C>A|353|LOC_Os03g33750|protein_coding|CODING|LOC_Os03g33750.1|2|1)	GT	./.	1/1	0/0	1/1	0/0	./.	0/0	1/1	1/1	./.	0/0	./.	./.	0/0	0/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	1/1	0/0	0/0	./.	1/1	0/0	./.	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	./.	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	19295568	SNP-3.19294078.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.876+352C>A|353|LOC_Os03g33750|protein_coding|CODING|LOC_Os03g33750.1|2|1)	GT	1/1	1/1	./.	1/1	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	./.	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	./.	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	./.	1/1	./.	./.	./.	1/1	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	./.	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.
+3	19296252	SNP-3.19294762.	A	G	.	.	PR;EFF=splice_donor_variant(HIGH|||c.910A>G|353|LOC_Os03g33750|protein_coding|CODING|LOC_Os03g33750.1|3|1),intron_variant(MODIFIER|||c.909+1A>G|353|LOC_Os03g33750|protein_coding|CODING|LOC_Os03g33750.1|3|1);LOF=(LOC_Os03g33750|LOC_Os03g33750|1|1.00)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	0/0	1/1	./.	1/1	1/1	0/0	1/1	./.	0/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/1	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	19296949	SNP-3.19295459.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	0/0	1/1	0/1	0/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	1/1	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1
+3	19297394	SNP-3.19295904.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	0/0	1/1	0/1	0/1	1/1	0/0	0/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	1/1	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1
+3	19301555	SNP-3.19300065.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gTa/gAa|p.Val773Glu/c.2318C>A|1535|LOC_Os03g33760|protein_coding|CODING|LOC_Os03g33760.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	./.	./.	1/1	1/1	./.	./.	./.	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	0/0	./.	./.	0/0	1/1	./.	1/1	1/1	./.	0/0	1/1	0/0	0/0	1/1	./.	./.	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	./.	./.	0/0	./.	./.	0/0	0/0	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	./.	1/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	./.	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19302439	SNP-3.19300949.	C	A	.	.	PR;EFF=synonymous_variant(LOW||Aag/Aag|p.Lys989Lys/c.2965C>A|1535|LOC_Os03g33760|protein_coding|CODING|LOC_Os03g33760.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	./.	1/1	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	./.	./.	1/1	0/0	1/1	./.	./.	1/1	./.	0/0	1/1	./.	./.	./.	./.	1/1	1/1	./.	1/1	./.	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	./.	1/1	./.	0/0	./.	./.	0/0	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	1/1	0/0	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	./.	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0
+3	19309647	SNP-3.19308157.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/1	0/1	0/0	0/0	1/1	./.	./.	./.	0/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/1	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/1	0/1	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	./.	0/1	0/1	0/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	./.	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	./.	0/1	./.	./.	0/0	0/0	0/1	1/1	./.	0/0	0/0	1/1	0/0	./.	0/1	0/0	./.	0/1	0/0	0/0	0/0	0/1	0/1	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0
+3	19315968	SNP-3.19314478.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Tgc/Agc|p.Cys170Ser/c.508C>A|282|LOC_Os03g33790|protein_coding|CODING|LOC_Os03g33790.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	0/0	./.	0/0	0/1	./.	./.	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	19316683	SNP-3.19315193.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	0/0	0/0	1/1	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	19317266	SNP-3.19315776.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	0/0	1/1	0/1	0/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1
+3	19317544	SNP-3.19316054.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/1	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	19318627	SNP-3.19317137.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.343+98G>T|122|LOC_Os03g33800|protein_coding|CODING|LOC_Os03g33800.1|1|1)	GT	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	./.	1/1	./.	./.	1/1	1/1	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	0/0	0/0	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	./.	0/0	1/1	./.	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0
+3	19318755	SNP-3.19317265.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Aca/Cca|p.Thr105Pro/c.313T>C|122|LOC_Os03g33800|protein_coding|CODING|LOC_Os03g33800.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	./.	./.	./.	1/1	./.	./.	1/1	./.	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	0/0	./.	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0
+3	19321635	SNP-3.19320145.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|caA/caT|p.Gln135His/c.405G>T|546|LOC_Os03g33810|protein_coding|CODING|LOC_Os03g33810.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/1	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	./.	./.	0/1	1/1	1/1	0/0	0/0	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	19321748	SNP-3.19320258.	C	A	.	.	PR;EFF=synonymous_variant(LOW||Tgc/Tgc|p.Cys98Cys/c.292G>T|546|LOC_Os03g33810|protein_coding|CODING|LOC_Os03g33810.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/1	./.	1/1	0/0	./.	./.	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	0/0	1/1	./.	0/0	./.	./.	0/0	1/1	0/0
+3	19321768	SNP-3.19320278.	C	A	.	.	PR;EFF=synonymous_variant(LOW||gTt/gTt|p.Val91Val/c.272G>T|546|LOC_Os03g33810|protein_coding|CODING|LOC_Os03g33810.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	./.	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/1	1/1	1/1	1/1	0/1	0/1	1/1	0/0	1/1	0/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/1	1/1	1/1	0/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	19321908	SNP-3.19320418.	A	G	.	.	PR;EFF=synonymous_variant(LOW||atC/atC|p.Ile44Ile/c.132T>C|546|LOC_Os03g33810|protein_coding|CODING|LOC_Os03g33810.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/1	0/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	0/1	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/1	0/0	1/1	0/0	./.	0/0	./.	1/1	0/0	0/0	0/1	./.	1/1	0/0	0/1	./.	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1
+3	19322247	SNP-3.19320757.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	0/0	1/1	0/1	0/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	1/1	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1
+3	19323330	SNP-3.19321840.	C	A	.	.	PR;EFF=stop_retained_variant(LOW||Taa/Taa|p.Ter901Ter/c.2701G>T|900|LOC_Os03g33819|protein_coding|CODING|LOC_Os03g33819.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/1	1/1	./.	0/0	./.	1/1	./.	./.	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	./.	1/1	1/1	./.	0/0	1/1	0/0	0/1	1/1	./.	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	19325067	SNP-3.19323577.	A	G	.	.	PR;EFF=synonymous_variant(LOW||gCa/gCa|p.Ala337Ala/c.1010T>C|900|LOC_Os03g33819|protein_coding|CODING|LOC_Os03g33819.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/1	0/0	1/1	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	./.	1/1	./.	1/1	1/1	1/1	0/1	./.	1/1	./.	./.	1/1	1/1	./.	0/1	1/1	0/1	./.	1/1	0/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	./.	0/0	1/1	0/0	1/1	./.	1/1	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/1	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	./.	1/1	1/1	1/1	0/1	0/0	1/1	0/0	1/1	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	./.	0/0	1/1
+3	19330460	SNP-3.19328970.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.763-124T>C|483|LOC_Os03g33828|protein_coding|CODING|LOC_Os03g33828.1|3|1)	GT	0/0	0/0	./.	1/1	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	./.	1/1	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	./.	0/0	0/0	1/1	./.	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0
+3	19339191	SNP-3.19337701.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	0/0	1/1	0/1	1/1	1/1	0/0	1/1	0/0	0/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	./.	1/1	1/1	0/0	0/0	./.	0/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1
+3	19340848	SNP-3.19339358.	C	A	.	.	PR;EFF=synonymous_variant(LOW||cAt/cAt|p.His43His/c.128C>A|380|LOC_Os03g33860|protein_coding|CODING|LOC_Os03g33860.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	./.	1/1	0/0	1/1	1/1	./.	./.	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	1/1	./.	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	./.	./.	1/1	0/0	./.	./.	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	19341601	SNP-3.19340111.	A	G	.	.	PR;EFF=synonymous_variant(LOW||cGc/cGc|p.Arg294Arg/c.881A>G|380|LOC_Os03g33860|protein_coding|CODING|LOC_Os03g33860.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	1/1	0/0	./.	./.	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	./.	0/0	./.	1/1	0/0	./.	1/1	1/1	1/1	0/0	./.	1/1	1/1	./.	./.	./.	1/1	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	./.	./.	./.	./.	./.	0/0	./.	./.	./.	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	0/0	./.	1/1	0/0	./.	./.	./.	./.	./.	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	./.	0/0	1/1	0/0	0/0	./.	./.	./.	1/1	0/0	1/1	1/1	1/1	./.	1/1	./.	./.	./.	1/1	1/1	./.	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	./.	1/1	./.	1/1	./.	./.	0/0	0/0	1/1	1/1	1/1	0/0	./.	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1
+3	19350828	SNP-3.19349338.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Gct/Cct|p.Ala199Pro/c.595T>C|240|LOC_Os03g33890|protein_coding|CODING|LOC_Os03g33890.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	1/1	0/0	./.	1/1	./.	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/0	1/1	./.	./.	./.	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	./.	./.	./.	./.	./.	1/1	0/0	./.	./.	1/1	1/1	./.	./.	1/1	./.	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	0/0	1/1	./.	./.	0/0	0/0	1/1	./.	0/0	1/1	./.	./.	1/1	./.	./.	./.	1/1	./.	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	1/1	0/0	1/1	0/0	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	./.	1/1	1/1	0/0	./.	./.	1/1	./.	0/0	./.	./.	1/1	./.	0/0	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	0/0	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	1/1	1/1	./.	0/0	1/1
+3	19351341	SNP-3.19349851.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.158-76G>T|240|LOC_Os03g33890|protein_coding|CODING|LOC_Os03g33890.1|1|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	1/1	./.	./.	0/0	1/1	1/1	1/1	./.	./.	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	./.	./.	1/1	./.	0/0	0/0	./.	./.	0/0	1/1	1/1	1/1	./.	1/1	./.	./.	./.	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0
+3	19352903	SNP-3.19351413.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	./.	./.	./.	./.	./.	1/1	0/0	1/1	./.	1/1	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	./.	1/1	./.	1/1	0/0	./.	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	./.	./.	1/1	1/1	./.	0/0	0/0	./.	./.	./.	1/1	0/0	1/1	./.	0/0	1/1	1/1	1/1	./.	1/1	./.	0/0	./.	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	./.	./.	./.	0/0	0/0	./.	0/0	./.	./.	./.	0/0	0/0	./.	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	./.	./.	1/1	./.	./.	0/0	0/0	1/1	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0
+3	19353261	SNP-3.19351771.	C	A	.	.	PR;EFF=stop_gained(HIGH|NONSENSE|Cga/Tga|p.Arg364*/c.1090G>T|475|LOC_Os03g33900|protein_coding|CODING|LOC_Os03g33900.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	1/1	0/0	1/1	0/0	./.	0/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	1/1	./.	0/0	1/1	0/0	0/0	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	./.	./.	./.	0/1	./.	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	./.	0/0	0/0	./.	./.	1/1	0/0	./.	./.	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	1/1	./.	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	1/1	1/1	0/0	./.	./.	./.	1/1	./.
+3	19354321	SNP-3.19352831.	C	A	.	.	PR;EFF=synonymous_variant(LOW||gaT/gaT|p.Asp170Asp/c.510G>T|475|LOC_Os03g33900|protein_coding|CODING|LOC_Os03g33900.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	./.	1/1	0/0	1/1	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	./.	./.	0/0	./.	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	./.	./.	./.	0/0	0/0	./.	0/0	1/1	./.	./.	1/1	1/1	1/1	./.	./.	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	1/1	./.	./.	0/0	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	./.
+3	19354906	SNP-3.19353416.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.292-26G>T|475|LOC_Os03g33900|protein_coding|CODING|LOC_Os03g33900.1|1|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	./.	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/1	1/1	0/0
+3	19356291	SNP-3.19354801.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	./.	./.	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0
+3	19365137	SNP-3.19363647.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	1/1	0/0	0/1	1/1	1/1	1/1	0/1	./.	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	0/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	./.	0/1	1/1	0/0	0/0	./.	./.	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0
+3	19365516	SNP-3.19364026.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	0/0	1/1	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	./.	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	1/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	1/1	1/1	1/1	./.	./.	1/1	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	1/1	1/1	1/1	0/1	1/1	./.	0/0	./.	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1
+3	19365823	SNP-3.19364333.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	./.	./.	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19366033	SNP-3.19364543.	A	G	.	.	PR;EFF=synonymous_variant(LOW||gtC/gtC|p.Val250Val/c.750T>C|278|LOC_Os03g33930|protein_coding|CODING|LOC_Os03g33930.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	19367600	SNP-3.19366110.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/1	0/1	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	./.	./.	1/1	0/1	./.	1/1	1/1	./.	1/1	1/1	./.	0/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	./.	1/1	1/1	./.	0/0	./.	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0
+3	19368394	SNP-3.19366904.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	./.	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/1	1/1	./.	1/1	./.	0/0	1/1	1/1	0/1	0/0	./.	0/0	1/1	./.	1/1	1/1	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/1	./.	1/1	1/1	1/1	./.	./.	./.	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1
+3	19368681	SNP-3.19367191.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Aac/Tac|p.Asn1039Tyr/c.3115G>T|1115|LOC_Os03g33940|protein_coding|CODING|LOC_Os03g33940.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	1/1	0/0	./.	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	./.	./.	0/0	0/0	1/1	1/1	0/0	./.	0/0	./.	1/1	./.	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	./.	0/0	1/1	./.	1/1	0/0	0/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	1/1	./.	1/1	./.	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	./.	1/1	./.	./.	./.	./.	1/1	0/0
+3	19368705	SNP-3.19367215.	C	A	.	.	PR;EFF=stop_gained(HIGH|NONSENSE|Gaa/Taa|p.Glu1031*/c.3091G>T|1115|LOC_Os03g33940|protein_coding|CODING|LOC_Os03g33940.1|3|1)	GT	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	./.	./.	1/1	0/0	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	./.	./.	0/0	./.	1/1	1/1	./.	./.	./.	1/1	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	19369044	SNP-3.19367554.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Cgg/Tgg|p.Arg918Trp/c.2752G>T|1115|LOC_Os03g33940|protein_coding|CODING|LOC_Os03g33940.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	./.	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	./.	./.	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	./.	1/1	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	./.	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	19376452	SNP-3.19374962.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	./.	0/1	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	./.	./.	0/0	0/0	0/1	1/1	0/0	0/0	0/1	1/1	0/0	0/1	0/1	./.	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	./.	0/1	./.	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/1	1/1	0/1	0/1	1/1	0/0
+3	19382095	SNP-3.19380605.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/1	1/1	1/1	1/1	./.	0/0	0/1	./.	0/1	1/1	0/0	0/0	1/1	0/0	0/1	0/1	0/0	0/0	0/1	0/1	./.	0/0	0/1	0/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/1	1/1	0/0	0/0	1/1	./.	1/1	0/1	./.	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	1/1	0/0	./.	0/0	1/1	0/0	0/0	./.	./.	0/0	0/1	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	19390968	SNP-3.19389478.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.187+961A>G|88|LOC_Os03g33980|protein_coding|CODING|LOC_Os03g33980.1|1|1)	GT	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	./.	1/1	1/1	./.	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	./.	./.	0/0	./.	0/0	0/0	0/1	./.	1/1	0/0	0/0	./.	./.	1/1	./.	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	./.	./.
+3	19404735	SNP-3.19403245.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	0/0	1/1	0/1	1/1	./.	1/1	0/1	1/1	1/1	0/0	1/1	./.	0/1	0/1	0/0	./.	1/1	0/1	1/1	1/1	1/1	./.	0/0	0/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	./.	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1
+3	19404760	SNP-3.19403270.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/1	0/0	0/0	1/1	0/0
+3	19405421	SNP-3.19403931.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	1/1	0/0	0/0
+3	19407854	SNP-3.19406364.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/1	./.	0/1	0/0	1/1	./.	0/0	1/1	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/1	0/0
+3	19408391	SNP-3.19406901.	A	G	.	.	PR;EFF=synonymous_variant(LOW||cGa/cGa|p.Arg47Arg/c.140A>G|190|LOC_Os03g34020|protein_coding|CODING|LOC_Os03g34020.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	1/1	./.	./.	1/1	0/0	0/0	./.	./.	0/0	0/0	1/1	1/1	0/0	./.	1/1	0/0	./.	./.	1/1	./.	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	./.	./.	1/1	./.	./.	0/0	0/0	1/1	0/0	1/1	./.	1/1	1/1	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	1/1	./.	0/0	0/0	./.	0/0	1/1	0/0	./.	./.	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	./.	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	19409064	SNP-3.19407574.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	./.	./.	0/0	1/1	0/0	1/1	./.	./.	0/1	./.	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/1	./.	1/1	./.	1/1	0/0	./.	0/1	1/1	0/0	./.	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	19409221	SNP-3.19407731.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	1/1	0/0	1/1	0/1	0/0	0/0	0/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/1	0/0	0/1	0/0	0/0	0/0	./.	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	19412162	SNP-3.19410672.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	19414835	SNP-3.19413345.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.732-1306G>T|326|LOC_Os03g34040|protein_coding|CODING|LOC_Os03g34040.1|1|1),intron_variant(MODIFIER|||c.615-1306G>T|287|LOC_Os03g34040|protein_coding|CODING|LOC_Os03g34040.2|2|1),intron_variant(MODIFIER|||c.732-466G>T|272|LOC_Os03g34040|protein_coding|CODING|LOC_Os03g34040.3|1|1)	GT	0/0	1/1	0/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/1	0/0	./.	0/0	0/0	1/1	./.	0/0	1/1	./.	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/1	0/1	0/0	0/0	./.	1/1	./.	0/0	0/1	1/1	0/0	0/0	./.	0/1	./.	0/0	0/0	0/0	0/1	1/1	0/1	1/1	0/0	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	./.	./.	1/1	0/0
+3	19415864	SNP-3.19414374.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.731+444T>C|326|LOC_Os03g34040|protein_coding|CODING|LOC_Os03g34040.1|1|1),intron_variant(MODIFIER|||c.614+444T>C|287|LOC_Os03g34040|protein_coding|CODING|LOC_Os03g34040.2|2|1),intron_variant(MODIFIER|||c.731+444T>C|272|LOC_Os03g34040|protein_coding|CODING|LOC_Os03g34040.3|1|1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	./.	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/0	./.	./.	./.	1/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	./.	./.	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	19417157	SNP-3.19415667.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	0/0	1/1	1/1	0/1	./.	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	./.	0/1	0/0	0/0	./.	1/1	0/1	./.	0/0	0/0	1/1	1/1	0/0	./.	1/1	./.	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	19417344	SNP-3.19415854.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	0/0	1/1	./.	./.	./.	./.	1/1	1/1	./.	./.	0/0	0/0	0/0	1/1	./.	./.	1/1	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	./.	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	./.	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	./.	./.	1/1	./.	./.	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	1/1	./.	0/0	./.	1/1	./.	0/0	./.	1/1	0/0	./.	./.	1/1	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	./.	./.	1/1	./.	1/1	0/0	./.	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	./.	0/0	0/0	./.	./.	0/0	0/0	./.	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0
+3	19420407	SNP-3.19418917.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	1/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	./.	0/0	./.	1/1	0/0	./.	./.	1/1	1/1	0/0	0/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	19422085	SNP-3.19420595.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gaC/gaG|p.Asp193Glu/c.579A>G|404|LOC_Os03g34070|protein_coding|CODING|LOC_Os03g34070.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	./.	0/0	1/1	0/0	0/1	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	0/1	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/1	0/0	0/0	1/1	0/0	0/0	./.	0/1	0/0	0/0	0/1	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	19422174	SNP-3.19420684.	C	A	.	.	PR;EFF=splice_acceptor_variant(HIGH|||c.616C>A|404|LOC_Os03g34070|protein_coding|CODING|LOC_Os03g34070.1|3|1),intron_variant(MODIFIER|||c.616-2C>A|404|LOC_Os03g34070|protein_coding|CODING|LOC_Os03g34070.1|2|1);LOF=(LOC_Os03g34070|LOC_Os03g34070|1|1.00)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	./.	./.	1/1	./.	0/0	./.	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	1/1	./.	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	./.	0/0
+3	19422218	SNP-3.19420728.	C	A	.	.	PR;EFF=synonymous_variant(LOW||Aac/Aac|p.Asn220Asn/c.658C>A|404|LOC_Os03g34070|protein_coding|CODING|LOC_Os03g34070.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/1	1/1	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	./.	1/1	0/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	./.	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19422797	SNP-3.19421307.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.934+146C>A|404|LOC_Os03g34070|protein_coding|CODING|LOC_Os03g34070.1|4|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0
+3	19425823	SNP-3.19424333.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19425921	SNP-3.19424431.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	0/0	./.	./.	1/1	./.	0/0	1/1	1/1	1/1	./.	./.	./.	./.	0/0	./.	0/0	./.	1/1	1/1	0/0	./.	0/0	./.	0/0	0/0	./.	./.	./.	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	./.
+3	19426001	SNP-3.19424511.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	./.	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	1/1	./.	1/1	0/0	1/1	./.	./.	1/1	1/1	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	./.	1/1	0/0	0/0	./.	./.	0/0	0/0	./.	./.	1/1	1/1	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	./.	0/0	./.	./.	0/0	./.	1/1	0/0	./.	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0
+3	19426360	SNP-3.19424870.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	./.	1/1	1/1	0/0	./.	./.	./.	0/0	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	./.	./.	0/0	0/0	./.	1/1	0/0	1/1	0/0	./.	0/0	1/1	./.	0/0	1/1	0/0	1/1	0/0	./.	1/1	1/1	0/0	1/1	./.	1/1	./.	1/1	./.	./.	1/1	./.	0/0	0/0	./.	0/0	1/1	./.	./.	./.	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	19426735	SNP-3.19425245.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|tcT/tcA|p.Ser35Ser/c.105C>A|235|LOC_Os03g34090|protein_coding|CODING|LOC_Os03g34090.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	0/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/1	0/1	0/0	0/0	0/1	./.	0/1	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	./.	0/0	./.	1/1	./.	0/0	0/0	0/0	0/1	0/1	0/1	1/1	0/1	0/0	0/0	0/1	0/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	19426905	SNP-3.19425415.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aGg/aAg|p.Arg92Lys/c.275C>A|235|LOC_Os03g34090|protein_coding|CODING|LOC_Os03g34090.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/1	1/1	0/0	0/0	./.	1/1	./.	./.	0/0	0/0	0/0	0/1	0/0	./.	0/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	1/1	0/0	0/0	1/1	0/1	0/0	./.	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0
+3	19427164	SNP-3.19425674.	A	G	.	.	PR;EFF=synonymous_variant(LOW||ccG/ccG|p.Pro178Pro/c.534A>G|235|LOC_Os03g34090|protein_coding|CODING|LOC_Os03g34090.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	1/1	1/1	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	./.	1/1	1/1	./.	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	./.	0/0	./.	1/1	0/0	1/1	1/1	./.	./.	./.	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	1/1	1/1	./.	1/1	./.	0/0	0/0	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	./.	./.	0/0	./.	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	19427190	SNP-3.19425700.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cGt/cAt|p.Arg187His/c.560C>A|235|LOC_Os03g34090|protein_coding|CODING|LOC_Os03g34090.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	./.	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	./.	./.	./.	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	./.	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	./.	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0
+3	19432253	SNP-3.19430763.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	./.	1/1	./.	1/1	0/0	0/0	./.	1/1	1/1	./.	./.	1/1	0/0	./.	1/1	./.	1/1	./.	./.	1/1	0/0	./.	1/1	./.	./.	./.	1/1	1/1	./.	1/1	1/1	./.	./.	./.	./.	./.	0/0	1/1	1/1	1/1	./.	./.	./.	1/1	./.	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	./.	./.	0/0	1/1	./.	0/0	1/1	./.	0/0	1/1	./.	./.	1/1	./.	./.	1/1	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	./.	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	1/1	0/0	0/0	0/0	1/1	./.	1/1	./.	./.	0/0	1/1	./.	./.	./.	./.	0/0	1/1	0/0	./.	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/0	1/1	./.	./.	./.	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	1/1	./.	./.
+3	19434788	SNP-3.19433298.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	./.	0/0	0/0	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	./.	./.	0/0	1/1	1/1	./.	1/1	1/1	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	19435700	SNP-3.19434210.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	1/1	./.	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	1/1	./.	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	./.	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	./.	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	1/1	./.	./.	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	19435878	SNP-3.19434388.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	0/0	./.	0/0	./.	./.	./.	0/0	./.	0/0	1/1	./.	./.	./.	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/0	./.	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0
+3	19436097	SNP-3.19434607.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0
+3	19437591	SNP-3.19436101.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	0/0	./.	./.	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0
+3	19439640	SNP-3.19438150.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	./.	1/1	0/0	1/1	1/1	0/1	./.	0/1	./.	./.	0/1	./.	1/1	./.	0/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	./.	0/1	0/1	0/0	1/1	0/0	1/1	0/1	./.	1/1	0/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	19448247	SNP-3.19446757.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cAc/cTc|p.His30Leu/c.89G>T|404|LOC_Os03g34140|protein_coding|CODING|LOC_Os03g34140.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	./.	./.	0/0	./.	0/0	0/0	./.	0/0	1/1	./.	./.	./.	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	0/0	0/0	./.	0/0	1/1	./.	0/0	1/1	0/0	./.	./.	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	./.	1/1	./.	1/1	1/1	./.	./.	1/1	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	19450614	SNP-3.19449124.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	1/1	0/0	./.	./.	1/1	0/0	0/0	./.	1/1	1/1	1/1	./.	./.	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	1/1	./.	1/1	1/1	./.	./.	1/1	0/1	0/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/1	1/1	./.	0/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	./.	0/1	1/1	0/0	1/1
+3	19452826	SNP-3.19451336.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|gcC/gcA|p.Ala127Ala/c.381C>A|314|LOC_Os03g34150|protein_coding|CODING|LOC_Os03g34150.1|2|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	0/1	1/1	1/1	0/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/1	0/1	0/0	1/1	0/0
+3	19452836	SNP-3.19451346.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Gtc/Atc|p.Val131Ile/c.391C>A|314|LOC_Os03g34150|protein_coding|CODING|LOC_Os03g34150.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/1	0/0	1/1	0/0	1/1	./.	./.	1/1	./.	1/1	./.	./.	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/1	./.	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	1/1	./.	1/1	./.	./.	0/0	1/1	0/0	0/0	1/1	1/1	./.	1/1	./.	0/1	./.	./.	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	./.	0/0	0/0	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	19453291	SNP-3.19451801.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gaT/gaA|p.Asp282Glu/c.846C>A|314|LOC_Os03g34150|protein_coding|CODING|LOC_Os03g34150.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	./.	./.	0/0	1/1	1/1	./.	1/1	0/0	./.	./.	./.	./.	./.	1/1	1/1	1/1	./.	./.	./.	0/0	./.	0/0	./.	./.	1/1	0/0	./.	0/0	./.	./.	./.	./.	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0
+3	19453506	SNP-3.19452016.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	19454317	SNP-3.19452827.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/1	1/1	0/0	1/1	./.	0/1	1/1	0/1	0/0	0/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	./.	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	1/1	./.	0/1	0/0	0/0	./.	./.	0/0	1/1	1/1	0/1	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19454570	SNP-3.19453080.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|tGg/tCg|p.Trp70Ser/c.209T>C|80|LOC_Os03g34160|protein_coding|CODING|LOC_Os03g34160.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	1/1	./.	./.	0/1	0/1	1/1	1/1	0/0	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	19458144	SNP-3.19456654.	C	A	.	.	PR;EFF=stop_gained(HIGH|NONSENSE|Gga/Tga|p.Gly360*/c.1078G>T|388|LOC_Os03g34170|protein_coding|CODING|LOC_Os03g34170.1|2|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19458371	SNP-3.19456881.	C	A	.	.	PR;EFF=splice_acceptor_variant(HIGH|||c.853G>T|388|LOC_Os03g34170|protein_coding|CODING|LOC_Os03g34170.1|2|1),intron_variant(MODIFIER|||c.853-2G>T|388|LOC_Os03g34170|protein_coding|CODING|LOC_Os03g34170.1|1|1);LOF=(LOC_Os03g34170|LOC_Os03g34170|1|1.00)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19459022	SNP-3.19457532.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aGc/aCc|p.Ser283Thr/c.848T>C|388|LOC_Os03g34170|protein_coding|CODING|LOC_Os03g34170.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	./.	0/0	./.	1/1	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1	./.	1/1	./.	0/0	1/1	1/1	1/1	./.	1/1	1/1	./.	./.	./.	./.	1/1	./.	0/0	1/1	./.	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	./.	./.	0/0	0/0	./.	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	./.	./.	./.	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	./.	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	0/0	./.	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1
+3	19459428	SNP-3.19457938.	C	A	.	.	PR;EFF=synonymous_variant(LOW||Tat/Tat|p.Tyr148Tyr/c.442G>T|388|LOC_Os03g34170|protein_coding|CODING|LOC_Os03g34170.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	0/1	0/1	1/1	0/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	19459557	SNP-3.19458067.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Gtc/Ctc|p.Val105Leu/c.313T>C|388|LOC_Os03g34170|protein_coding|CODING|LOC_Os03g34170.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	./.	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	./.	1/1	./.	./.	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	1/1	0/0	1/1	./.	./.	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	./.	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/0	./.	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	./.	1/1
+3	19459649	SNP-3.19458159.	C	A	.	.	PR;EFF=synonymous_variant(LOW||aTt/aTt|p.Ile74Ile/c.221G>T|388|LOC_Os03g34170|protein_coding|CODING|LOC_Os03g34170.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/1	1/1	0/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19460831	SNP-3.19459341.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/1	0/0	0/0	1/1	1/1	1/1	./.	./.	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19461049	SNP-3.19459559.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/1	0/1	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/1	./.	0/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	1/1	0/0	0/0	0/1	1/1	1/1	0/1	0/0	1/1	0/1	1/1	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1
+3	19462836	SNP-3.19461346.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|aaG/aaA|p.Lys181Lys/c.543C>A|285|LOC_Os03g34180|protein_coding|CODING|LOC_Os03g34180.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	19463025	SNP-3.19461535.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|ttT/ttA|p.Phe244Leu/c.732C>A|285|LOC_Os03g34180|protein_coding|CODING|LOC_Os03g34180.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19463104	SNP-3.19461614.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Aag/Gag|p.Lys271Glu/c.811A>G|285|LOC_Os03g34180|protein_coding|CODING|LOC_Os03g34180.1|5|1)	GT	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0
+3	19476117	SNP-3.19474627.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.436+118C>A|313|LOC_Os03g34200|protein_coding|CODING|LOC_Os03g34200.1|4|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	19477391	SNP-3.19475901.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	19478609	SNP-3.19477119.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	./.	./.	./.	./.	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	./.	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	./.	./.	1/1	0/0
+3	19480097	SNP-3.19478607.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.355+468C>A|401|LOC_Os03g34210|protein_coding|CODING|LOC_Os03g34210.1|2|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	1/1	0/0
+3	19482708	SNP-3.19481218.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	0/0	1/1	1/1	0/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/1	0/0	1/1	1/1	0/0	./.	./.	./.	./.	0/0	0/1	0/1	1/1	1/1	1/1	./.	1/1	./.	0/1	0/1	0/0	1/1	./.	./.	0/1	0/0	0/1	1/1	1/1	0/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	1/1	0/0	1/1	./.	1/1	./.	0/0	./.	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/1	1/1	0/0	1/1	0/1	1/1	0/0	./.	0/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	./.	1/1	./.	1/1	0/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	./.	./.	0/0	./.	./.	./.	0/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1
+3	19483515	SNP-3.19482025.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	./.	0/1	./.	1/1	0/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	./.	1/1	0/0	0/1	0/0	0/1	./.	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	19483872	SNP-3.19482382.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19483955	SNP-3.19482465.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	./.	0/0	0/1	0/1	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1
+3	19484593	SNP-3.19483103.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/1	0/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	./.	0/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	./.	0/0	./.	./.	0/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.
+3	19485735	SNP-3.19484245.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19486781	SNP-3.19485291.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	1/1	./.	0/1	0/0	0/1	1/1	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	19488301	SNP-3.19486811.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	./.	0/0	./.	./.	./.	0/0	0/0	0/0	./.	./.	./.	./.	./.	0/0	./.	1/1	0/0	1/1	1/1	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	./.	./.	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	./.	./.	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1
+3	19488438	SNP-3.19486948.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	19488488	SNP-3.19486998.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/1	1/1	./.	1/1	0/0	1/1	./.	0/1	./.	./.	0/1	0/1	0/1	0/1	1/1	0/1	1/1	./.	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	./.	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/1	0/1	0/1	1/1	./.	./.	1/1	1/1	1/1	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0
+3	19490479	SNP-3.19488989.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.240+14G>T|433|LOC_Os03g34220|protein_coding|CODING|LOC_Os03g34220.1|2|1)	GT	./.	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	./.	1/1	0/0	1/1	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	1/1	./.	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0	./.	./.	./.	0/0	./.	1/1	1/1	1/1	./.	./.	1/1	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0
+3	19491182	SNP-3.19489692.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/1	./.	1/1	1/1	1/1	./.	1/1	./.	./.	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	./.	./.	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1
+3	19491464	SNP-3.19489974.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19491625	SNP-3.19490135.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	1/1	./.	0/0	0/0	./.	./.	1/1	./.	0/0	./.	0/0	0/0	0/0	./.	1/1	./.	1/1	./.	./.	0/0	./.	./.	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	1/1	./.	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	./.	1/1
+3	19497929	SNP-3.19496439.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.2070+30C>A|908|LOC_Os03g34240|protein_coding|CODING|LOC_Os03g34240.1|1|1)	GT	0/0	1/1	./.	1/1	./.	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	./.	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	./.	1/1	./.	./.	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	./.	0/0	1/1	./.	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	./.	./.	0/0	1/1	0/0
+3	19508441	SNP-3.19506951.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Cgc/Tgc|p.Arg527Cys/c.1579G>T|931|LOC_Os03g34270|protein_coding|CODING|LOC_Os03g34270.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	./.	./.	./.	1/1	0/0	1/1	./.	./.	0/0	./.	./.	./.	./.	./.	1/1	./.	./.	1/1	./.	0/0	./.	0/0	./.	0/0	./.	1/1	./.	0/0	./.	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	./.	1/1	0/0	./.	./.	1/1	1/1	./.	./.	0/0	1/1	./.	1/1	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	19511582	SNP-3.19510092.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	1/1	0/0	./.	0/0	./.	1/1	./.	0/0	./.	1/1	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	./.	./.	./.	1/1	0/0	0/0	./.	0/0	0/0	1/1	./.	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	./.	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	./.	0/0	1/1	0/0	1/1	./.	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	./.	./.	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/0
+3	19516921	SNP-3.19515431.	C	A	.	.	PR;EFF=stop_gained(HIGH|NONSENSE|Gag/Tag|p.Glu89*/c.265G>T|176|LOC_Os03g34290|protein_coding|CODING|LOC_Os03g34290.1|2|1),splice_region_variant(LOW|||c.265G>T|176|LOC_Os03g34290|protein_coding|CODING|LOC_Os03g34290.1|2|1);LOF=(LOC_Os03g34290|LOC_Os03g34290|1|1.00);NMD=(LOC_Os03g34290|LOC_Os03g34290|1|1.00)	GT	./.	1/1	./.	1/1	0/0	./.	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	./.	./.	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	./.	1/1	1/1	./.	1/1	./.	./.	./.	./.	1/1	0/0	1/1	./.	1/1	1/1	./.	./.	1/1	0/0	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0
+3	19517647	SNP-3.19516157.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/1	0/0	0/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	./.	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	./.	./.	1/1	0/0
+3	19517760	SNP-3.19516270.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/1	0/1	1/1	0/1	./.	0/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/1	0/0	./.	0/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0
+3	19518179	SNP-3.19516689.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	1/1	./.	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/1	./.	0/1	0/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/1	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	./.
+3	19518782	SNP-3.19517292.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/1	1/1	./.	1/1	1/1	0/0	1/1	0/1	0/1	0/0	./.	0/0	1/1	1/1	0/0	1/1	0/1	0/0	0/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/1	0/1	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	19525732	SNP-3.19524242.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Ata/Tta|p.Ile44Leu/c.130G>T|417|LOC_Os03g34300|protein_coding|CODING|LOC_Os03g34300.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),missense_variant(MODERATE|MISSENSE|Ata/Tta|p.Ile44Leu/c.130G>T|372|LOC_Os03g34300|protein_coding|CODING|LOC_Os03g34300.2|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	./.	./.	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/1	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/1	0/0
+3	19526547	SNP-3.19525057.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	./.	0/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	0/1	./.	./.	1/1	./.	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/1	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/1	0/1	0/1	0/1	./.	0/1	0/0	0/0	0/0	0/1	0/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	0/1	0/0	1/1	0/1	0/0	0/0	0/0	0/1	./.	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	1/1	0/0	1/1
+3	19526749	SNP-3.19525259.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	./.	1/1	./.	1/1	1/1	0/0	0/0	1/1	./.	./.	1/1	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	./.	1/1	./.	./.	1/1	0/0	0/0	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	./.	./.	0/0	0/0	./.	0/0	./.	0/0	1/1	1/1	0/0	./.	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	./.	1/1	./.	1/1	./.	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	19529334	SNP-3.19527844.	A	G	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||772|c.*772A>G|143|LOC_Os03g34310|protein_coding|CODING|LOC_Os03g34310.5|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),3_prime_UTR_variant(MODIFIER||226|c.*226A>G|176|LOC_Os03g34310|protein_coding|CODING|LOC_Os03g34310.4|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME),intron_variant(MODIFIER|||c.417-61A>G|180|LOC_Os03g34310|protein_coding|CODING|LOC_Os03g34310.3|1|1),intron_variant(MODIFIER|||c.417-61A>G|181|LOC_Os03g34310|protein_coding|CODING|LOC_Os03g34310.6|1|1),intron_variant(MODIFIER|||c.460-61A>G|255|LOC_Os03g34310|protein_coding|CODING|LOC_Os03g34310.1|2|1),intron_variant(MODIFIER|||c.460-61A>G|209|LOC_Os03g34310|protein_coding|CODING|LOC_Os03g34310.2|2|1)	GT	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	19530150	SNP-3.19528660.	C	A	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||1588|c.*1588C>A|143|LOC_Os03g34310|protein_coding|CODING|LOC_Os03g34310.5|1|1),3_prime_UTR_variant(MODIFIER||1042|c.*1042C>A|176|LOC_Os03g34310|protein_coding|CODING|LOC_Os03g34310.4|2|1),3_prime_UTR_variant(MODIFIER||629|c.*629C>A|180|LOC_Os03g34310|protein_coding|CODING|LOC_Os03g34310.3|2|1),3_prime_UTR_variant(MODIFIER||447|c.*447C>A|255|LOC_Os03g34310|protein_coding|CODING|LOC_Os03g34310.1|3|1),3_prime_UTR_variant(MODIFIER||80|c.*80C>A|181|LOC_Os03g34310|protein_coding|CODING|LOC_Os03g34310.6|3|1),3_prime_UTR_variant(MODIFIER||39|c.*39C>A|209|LOC_Os03g34310|protein_coding|CODING|LOC_Os03g34310.2|4|1)	GT	0/0	1/1	./.	1/1	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	19530426	SNP-3.19528936.	C	A	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||1864|c.*1864C>A|143|LOC_Os03g34310|protein_coding|CODING|LOC_Os03g34310.5|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),intron_variant(MODIFIER|||c.*549+174C>A|255|LOC_Os03g34310|protein_coding|CODING|LOC_Os03g34310.1|3|1),intron_variant(MODIFIER|||c.*141+174C>A|209|LOC_Os03g34310|protein_coding|CODING|LOC_Os03g34310.2|4|1),intron_variant(MODIFIER|||c.*731+174C>A|180|LOC_Os03g34310|protein_coding|CODING|LOC_Os03g34310.3|2|1),intron_variant(MODIFIER|||c.*1144+174C>A|176|LOC_Os03g34310|protein_coding|CODING|LOC_Os03g34310.4|2|1),intron_variant(MODIFIER|||c.*182+174C>A|181|LOC_Os03g34310|protein_coding|CODING|LOC_Os03g34310.6|3|1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/1	0/1	./.	./.	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	./.	1/1	0/0	0/0	1/1	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	19531487	SNP-3.19529997.	A	G	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||2925|c.*2673A>G|143|LOC_Os03g34310|protein_coding|CODING|LOC_Os03g34310.5|2|1),3_prime_UTR_variant(MODIFIER||1784|c.*1001A>G|255|LOC_Os03g34310|protein_coding|CODING|LOC_Os03g34310.1|6|1),3_prime_UTR_variant(MODIFIER||1376|c.*593A>G|209|LOC_Os03g34310|protein_coding|CODING|LOC_Os03g34310.2|7|1),3_prime_UTR_variant(MODIFIER||1966|c.*1183A>G|180|LOC_Os03g34310|protein_coding|CODING|LOC_Os03g34310.3|5|1),3_prime_UTR_variant(MODIFIER||2379|c.*1596A>G|176|LOC_Os03g34310|protein_coding|CODING|LOC_Os03g34310.4|5|1),3_prime_UTR_variant(MODIFIER||1417|c.*634A>G|181|LOC_Os03g34310|protein_coding|CODING|LOC_Os03g34310.6|6|1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	19531818	SNP-3.19530328.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	19532303	SNP-3.19530813.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	19532340	SNP-3.19530850.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1
+3	19532597	SNP-3.19531107.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/1	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/1	./.	1/1	0/1	0/1	0/0	0/1	1/1	1/1	0/1	1/1	./.	0/1	1/1	0/1	0/1	1/1	0/0	1/1	1/1	./.	1/1	0/1	0/1	1/1	1/1	1/1	./.	./.	./.	1/1	0/1	./.	./.	0/0	0/1	1/1	1/1	1/1	1/1	./.	0/1	0/0	0/1	1/1	0/1	./.	1/1	0/1	0/0	0/1	1/1	1/1	0/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/1	0/1	0/1	0/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/1	1/1	0/0	0/0	0/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	0/1	./.	0/1	1/1	./.	1/1	./.	1/1	0/1	0/0	0/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/1	0/1	1/1	./.	0/1	./.	./.	./.	./.	./.	0/1	./.	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	1/1	./.	0/1	0/0	1/1
+3	19536512	SNP-3.19535022.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.354+12G>T|469|LOC_Os03g34320|protein_coding|CODING|LOC_Os03g34320.1|2|1)	GT	./.	1/1	./.	1/1	0/1	./.	1/1	1/1	1/1	1/1	0/1	./.	0/0	0/0	0/1	1/1	0/0	./.	1/1	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/1	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	./.	1/1	./.	0/0	0/1	./.	0/1	0/0	./.	0/0	0/0	./.	./.	./.	./.	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	./.	0/0	0/0	0/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/1	1/1	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	./.	0/0	0/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	19538465	SNP-3.19536975.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	./.	./.	1/1	./.	0/0	./.	./.	0/0	1/1	0/0	./.	1/1	1/1	0/0	1/1	0/0	./.	./.	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	./.	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	19543078	SNP-3.19541588.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/1	0/1	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	./.	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	19570108	SNP-3.19568618.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ttC/ttT|p.Phe113Phe/c.339G>T|540|LOC_Os03g35330|protein_coding|CODING|LOC_Os03g35330.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/1	1/1	./.	1/1	0/0	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	0/1	1/1	./.	1/1	0/0	1/1	0/1	1/1	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	0/1	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	19580263	SNP-3.19578773.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	./.	0/0	1/1	0/0	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	./.	0/1	0/1	1/1	./.	0/1	1/1	./.	1/1	0/1	1/1	./.	./.	0/1	0/0	1/1	0/0	1/1	1/1	1/1	0/1	0/0	0/0	1/1	1/1	0/0	1/1	./.	./.	1/1	./.	./.	./.	0/1	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/1	0/1	0/1	./.	0/0	0/0	./.	0/1	0/0	1/1	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/1	1/1	0/1	0/1	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1
+3	19580733	SNP-3.19579243.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/1	0/0	1/1	1/1	1/1	0/0	./.	./.	./.	0/1	1/1	./.	0/0	1/1	./.	0/0	./.	0/0	1/1	./.	0/0	0/1	0/0	0/0	0/0	0/1	0/1	0/1	0/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/1	0/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/1	0/0	./.	0/1	0/0	0/0	0/0	./.	1/1	0/1	0/0	0/1	1/1	0/0	0/1	0/0	0/1	./.	0/0	0/0	0/0	./.	1/1	0/0	1/1	./.	./.	0/0	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0
+3	19581039	SNP-3.19579549.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	0/0	./.	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	./.	./.	./.	./.	1/1	./.	./.	1/1	1/1	./.	0/0	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	./.	0/0	./.	./.	0/0	./.	1/1	./.	1/1	./.	./.	0/0	1/1	0/0	0/0	./.	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	./.	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0
+3	19587166	SNP-3.19585676.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cGt/cTt|p.Arg1787Leu/c.5360G>T|2128|LOC_Os03g35340|protein_coding|CODING|LOC_Os03g35340.1|26|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19588936	SNP-3.19587446.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.3954-296G>T|2128|LOC_Os03g35340|protein_coding|CODING|LOC_Os03g35340.1|24|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/1	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	./.	./.	./.	0/1	0/1	0/0	0/0	./.	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19595062	SNP-3.19593572.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|tcG/tcC|p.Ser632Ser/c.1896T>C|2128|LOC_Os03g35340|protein_coding|CODING|LOC_Os03g35340.1|13|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	19596740	SNP-3.19595250.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.1600+87G>T|2128|LOC_Os03g35340|protein_coding|CODING|LOC_Os03g35340.1|10|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19596996	SNP-3.19595506.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.1559-128T>C|2128|LOC_Os03g35340|protein_coding|CODING|LOC_Os03g35340.1|9|1)	GT	0/0	0/1	1/1	0/0	0/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/1	1/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	./.	0/0	0/0	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/1	0/0	0/0	1/1	./.	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	1/1	1/1	0/0	0/0
+3	19601864	SNP-3.19600374.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.360+255G>T|2128|LOC_Os03g35340|protein_coding|CODING|LOC_Os03g35340.1|4|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0
+3	19605197	SNP-3.19603707.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19605762	SNP-3.19604272.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19606910	SNP-3.19605420.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	19607249	SNP-3.19605759.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/1	1/1	1/1	0/0	0/0
+3	19610709	SNP-3.19609219.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/1	0/0	0/1	0/0	0/1	1/1	./.	./.	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	./.	0/0
+3	19611179	SNP-3.19609689.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	./.	1/1	0/0	0/0	0/0	./.	0/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/1	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	./.	0/0
+3	19612474	SNP-3.19610984.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	./.	0/0	./.	0/0	./.	./.	./.	./.	./.	0/0	0/0	./.	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	19614779	SNP-3.19613289.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0
+3	19615499	SNP-3.19614009.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.106-49G>T|212|LOC_Os03g35370|protein_coding|CODING|LOC_Os03g35370.1|1|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	19616179	SNP-3.19614689.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.105+361T>C|212|LOC_Os03g35370|protein_coding|CODING|LOC_Os03g35370.1|1|1)	GT	0/1	./.	1/1	./.	0/0	./.	0/0	0/0	0/1	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/1	./.	0/1	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	./.	0/0	0/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	0/0	./.	./.	1/1	./.	1/1	0/0	1/1	1/1	0/0	./.	0/0	./.	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	./.	./.	0/0	0/0	./.	./.	0/0	1/1	./.	0/0	0/0	./.	./.	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/1	0/1	1/1	0/0	0/1	0/0	./.	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/1	1/1	0/0	1/1	0/0	./.	./.	0/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	1/1
+3	19616877	SNP-3.19615387.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	./.	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	./.	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	./.	./.	1/1	1/1	./.	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	1/1	0/0	1/1	./.	1/1	0/0	./.	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.
+3	19616878	SNP-3.19615388.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	1/1	./.	0/0	0/0	1/1	1/1	./.	./.	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	./.	./.	0/0	0/0	1/1	1/1	0/0	0/1	1/1	0/1	./.	./.	1/1	./.	1/1	./.	./.	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	19618127	SNP-3.19616637.	A	G	.	.	PR;EFF=synonymous_variant(LOW||aGc/aGc|p.Ser294Ser/c.881A>G|1028|LOC_Os03g35380|protein_coding|CODING|LOC_Os03g35380.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	./.	0/0	./.	./.	./.	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	./.	./.	./.	1/1	0/0	./.	./.	0/0	./.	./.	./.	1/1	./.	./.	./.	0/0	./.	./.	./.	1/1	./.	1/1	./.	1/1	0/0	1/1	./.	1/1	1/1	./.	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	./.	./.	./.	1/1	1/1	1/1	./.	./.	./.	0/0	1/1	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	./.	./.	0/0	./.	1/1	1/1	./.	0/0	./.	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	0/0	./.	./.	./.	0/0	./.	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1
+3	19618567	SNP-3.19617077.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Cca/Aca|p.Pro441Thr/c.1321C>A|1028|LOC_Os03g35380|protein_coding|CODING|LOC_Os03g35380.1|2|1)	GT	0/0	1/1	0/0	1/1	./.	./.	0/0	1/1	1/1	./.	./.	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	./.	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	1/1	./.	1/1	./.	./.	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1	1/1	0/0	1/1	./.	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	./.	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	./.	./.	1/1	0/0
+3	19623746	SNP-3.19622256.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|acG/acT|p.Thr1082Thr/c.3246G>T|1908|LOC_Os03g35390|protein_coding|CODING|LOC_Os03g35390.1|4|1)	GT	0/0	1/1	./.	./.	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	./.	1/1	0/0	./.	1/1	./.	0/0	./.	./.	1/1	0/0	./.	1/1	1/1	1/1	1/1	./.	./.	./.	0/0	./.	./.	1/1	0/0	1/1	./.	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/1	1/1	0/0	./.	1/1	./.	0/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	1/1	0/0
+3	19627672	SNP-3.19626182.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	0/0	0/0	./.	./.	./.	1/1	1/1	./.	./.	./.	0/0	./.	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	./.	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1
+3	19628617	SNP-3.19627127.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/1	1/1	./.	1/1	0/0	0/0	0/0	./.	1/1	0/1	1/1	1/1	0/0	1/1	0/1	./.	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0
+3	19629736	SNP-3.19628246.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	0/0	1/1	./.	0/1	./.	1/1	1/1	1/1	0/0	./.	0/1	0/1	0/1	1/1	0/0	0/1	1/1	./.	0/1	0/0	0/0	./.	./.	0/1	./.	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/1	1/1	./.	./.	0/0	0/1	./.	0/0	./.	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/1	1/1	./.	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	./.	1/1	0/1	./.	0/0	0/0	1/1	0/1	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	1/1	./.	0/0	1/1	0/0	0/0	0/1	0/0	0/0	./.	1/1	0/0	1/1	./.	0/0	./.	0/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/1
+3	19630493	SNP-3.19629003.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cGt/cCt|p.Arg374Pro/c.1121T>C|550|LOC_Os03g35400|protein_coding|CODING|LOC_Os03g35400.1|8|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	1/1	1/1	0/0	0/0
+3	19630519	SNP-3.19629029.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|aaC/aaT|p.Asn365Asn/c.1095G>T|550|LOC_Os03g35400|protein_coding|CODING|LOC_Os03g35400.1|8|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	0/1	./.	1/1	./.	1/1	1/1	./.	0/0	./.	0/0	1/1	1/1	./.	0/0	0/1	0/0	./.	1/1	1/1	1/1	0/1	0/0	0/0	1/1	1/1	0/0	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19630572	SNP-3.19629082.	C	A	.	.	PR;EFF=splice_region_variant(LOW|||c.1048G>T|550|LOC_Os03g35400|protein_coding|CODING|LOC_Os03g35400.1|7|1),intron_variant(MODIFIER|||c.1048-6G>T|550|LOC_Os03g35400|protein_coding|CODING|LOC_Os03g35400.1|7|1)	GT	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	./.	0/0	1/1	./.	1/1	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	1/1	./.	0/0	1/1	0/0
+3	19631305	SNP-3.19629815.	C	A	.	.	PR;EFF=splice_acceptor_variant(HIGH|||c.644G>T|550|LOC_Os03g35400|protein_coding|CODING|LOC_Os03g35400.1|5|1),intron_variant(MODIFIER|||c.644-2G>T|550|LOC_Os03g35400|protein_coding|CODING|LOC_Os03g35400.1|4|1);LOF=(LOC_Os03g35400|LOC_Os03g35400|1|1.00)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	0/1	./.	0/0	0/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1
+3	19632687	SNP-3.19631197.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|atC/atT|p.Ile8Ile/c.24G>T|550|LOC_Os03g35400|protein_coding|CODING|LOC_Os03g35400.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	./.	1/1	./.	./.	./.	./.	./.	1/1	0/0	./.	./.	./.	./.	./.	./.	./.	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	./.	0/1	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	19632711	SNP-3.19631221.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/1	0/1	./.	1/1	0/0	1/1	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	./.	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	19636067	SNP-3.19634577.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	./.	./.	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	./.	./.	0/0	1/1	1/1	0/0	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	19638983	SNP-3.19637493.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/1	./.	0/0	1/1	1/1	./.	0/0	./.	./.	0/0	0/0	1/1	0/0	./.	1/1	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19643016	SNP-3.19641526.	C	A	.	.	PR;EFF=synonymous_variant(LOW||aTc/aTc|p.Ile1357Ile/c.4070G>T|1436|LOC_Os03g35430|protein_coding|CODING|LOC_Os03g35430.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/1	./.	0/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	0/1	0/1	0/0	0/0	0/1	0/0	./.	0/1	0/0	0/0	0/1	./.	./.	./.	./.	./.	1/1	0/0	0/0	./.	1/1	0/0	./.	./.	1/1	1/1	./.	./.	0/1	1/1	./.	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	1/1	0/0
+3	19652068	SNP-3.19650578.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	1/1	0/0	1/1	./.	0/1	0/0	0/0	0/0	./.	./.	./.	0/0	1/1	0/0	./.	./.	0/0	1/1	0/0	./.	./.	0/0	1/1	0/1	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	0/0	./.	./.	./.	0/1	0/0	./.	./.	1/1	0/0	./.	./.	./.	1/1	0/1	0/0	1/1	./.	./.	0/0	0/1	0/0	./.	1/1	./.	./.	0/0	0/0	1/1	./.	0/0	0/1	0/1	./.	1/1	1/1	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	./.	1/1	0/1	./.	./.	0/0	1/1	1/1	./.	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	./.	./.	./.	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	./.	./.	./.	0/1	0/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	./.	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	./.	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1
+3	19654407	SNP-3.19652917.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	./.	0/0	./.	./.	1/1	1/1	./.	0/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	./.	1/1	./.	0/1	./.	0/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	0/1	./.	1/1	0/0	0/0	1/1	0/1	0/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	0/0	0/1	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	19654713	SNP-3.19653223.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	19656074	SNP-3.19654584.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Aca/Tca|p.Thr1194Ser/c.3580G>T|1210|LOC_Os03g35454|protein_coding|CODING|LOC_Os03g35454.1|11|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	19656332	SNP-3.19654842.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Ggg/Tgg|p.Gly1108Trp/c.3322G>T|1210|LOC_Os03g35454|protein_coding|CODING|LOC_Os03g35454.1|11|1)	GT	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	./.	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19656379	SNP-3.19654889.	C	A	.	.	PR;EFF=synonymous_variant(LOW||cTg/cTg|p.Leu1092Leu/c.3275G>T|1210|LOC_Os03g35454|protein_coding|CODING|LOC_Os03g35454.1|11|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	19657351	SNP-3.19655861.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.3028+119G>T|1210|LOC_Os03g35454|protein_coding|CODING|LOC_Os03g35454.1|10|1)	GT	1/1	0/0	1/1	0/0	./.	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	1/1	./.	./.	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	1/1	./.	0/0	./.	./.	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	./.	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	0/0	0/0	./.	./.	./.	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	./.	./.	0/0	0/0	./.	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	./.	1/1	1/1	./.	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.
+3	19664349	SNP-3.19662859.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.188+926T>C|1210|LOC_Os03g35454|protein_coding|CODING|LOC_Os03g35454.1|1|1)	GT	0/0	0/0	0/1	0/0	0/1	0/0	0/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	./.	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	19665188	SNP-3.19663698.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.188+87G>T|1210|LOC_Os03g35454|protein_coding|CODING|LOC_Os03g35454.1|1|1)	GT	./.	1/1	./.	1/1	0/0	./.	0/0	0/1	1/1	1/1	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/1	./.	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	./.	./.	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/1	1/1	1/1	0/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	./.	1/1	0/0	0/1	0/0	0/0	0/1	0/0	1/1	0/0	./.	1/1	0/0	1/1	./.	./.	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	./.	./.	./.	1/1	0/0	1/1	0/0	./.	0/1	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/0	1/1	./.
+3	19665222	SNP-3.19663732.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.188+53G>T|1210|LOC_Os03g35454|protein_coding|CODING|LOC_Os03g35454.1|1|1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/1	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/1	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19667063	SNP-3.19665573.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	./.	./.	0/0	./.	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	0/0	0/0	./.	1/1	1/1	1/1	./.	./.	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	1/1	0/0
+3	19667335	SNP-3.19665845.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	1/1	0/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	0/1	0/1	1/1	1/1	0/1	0/0	1/1	0/1	0/1	./.	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/1	./.	0/1	0/1	./.	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	19667669	SNP-3.19666179.	C	A	.	.	PR;EFF=stop_gained(HIGH|NONSENSE|tCg/tAg|p.Ser34*/c.101C>A|126|LOC_Os03g35470|protein_coding|CODING|LOC_Os03g35470.1|1|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0
+3	19668515	SNP-3.19667025.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	./.	./.	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	./.	1/1	0/0	./.	0/0	./.	./.	./.	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	1/1	./.	0/0	0/0	./.	./.	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	1/1	./.	0/0	./.	./.	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1
+3	19671820	SNP-3.19670330.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|atC/atG|p.Ile604Met/c.1812A>G|697|LOC_Os03g35480|protein_coding|CODING|LOC_Os03g35480.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/1	0/0	0/1	0/0	0/0	0/1	./.	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/1	0/1	1/1	./.	0/1	./.	0/0	0/1	0/0	./.	0/0	0/1	0/1	0/1	1/1	./.	./.	1/1	0/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	./.	1/1	1/1	0/1	0/0	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/1	0/1	./.	0/1	0/0	./.	0/0	0/1	1/1	0/1	0/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	./.	./.	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/1	./.	1/1	./.	1/1	1/1	./.	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/1	0/0	1/1	./.	1/1
+3	19672105	SNP-3.19670615.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	./.	0/1	1/1	0/0	./.	0/0	1/1	1/1	0/1	0/0	0/0	./.	0/0	./.	1/1	0/0	./.	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	./.	./.	./.	0/0	0/0	0/0	./.	0/0	./.	./.	./.	./.	./.	0/0	./.	./.	0/0	0/1	./.	1/1	./.	0/0	./.	0/0	./.	./.	./.	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	./.	./.	1/1	./.	0/0	0/1	0/0	./.	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	./.	./.	0/0	0/0	1/1	./.	0/0	./.	0/0	./.	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/1	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	./.	./.	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	./.	./.	./.	./.	0/0
+3	19672425	SNP-3.19670935.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	./.	./.	./.	0/0	1/1	0/0	./.	./.	0/0	1/1	1/1	1/1	1/1	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	1/1	./.	./.	./.	./.	1/1	1/1	1/1	0/0	1/1	./.	./.	./.	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	./.	./.	0/0	./.	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	1/1	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	1/1	1/1	./.	./.	./.	./.	0/0	./.	1/1	0/0	./.	./.	0/0	./.	0/0	1/1	1/1	0/0	./.	1/1	./.	0/0	./.	1/1	1/1	./.	0/0	1/1	1/1	./.	0/0	1/1	0/0	./.	./.	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	./.	1/1	./.	./.	1/1
+3	19672940	SNP-3.19671450.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	./.	./.	0/0	1/1	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	./.	./.	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0
+3	19680398	SNP-3.19678908.	A	G	.	.	PR;EFF=synonymous_variant(LOW||Ggt/Ggt|p.Gly125Gly/c.373A>G|159|LOC_Os03g35500|protein_coding|CODING|LOC_Os03g35500.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	0/0	./.	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	./.	./.	0/0	1/1	0/0	./.	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	./.	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	./.	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	1/1	0/0	0/0	1/1	1/1	./.	./.	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	19684618	SNP-3.19683128.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	./.	0/0	0/1	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/1	./.	1/1	0/0	./.	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/1	1/1	1/1	1/1	./.	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	0/0	0/1	0/1	0/0	./.	0/0	0/1	0/0	./.	1/1	1/1	1/1	./.	0/1	1/1	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/1	1/1	0/0	1/1	0/0	0/0	1/1	0/1	./.	./.	0/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/1	./.	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	./.	0/1	./.	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0
+3	19684739	SNP-3.19683249.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/1	0/0	0/0	0/1	1/1	1/1	1/1	0/1	1/1	0/0	./.	1/1	0/1	./.	0/1	0/0	0/1	0/1	0/1	1/1	1/1	1/1	1/1	./.	./.	./.	./.	1/1	0/0	./.	1/1	1/1	0/0	1/1	0/0	./.	./.	1/1	./.	1/1	0/0	0/0	0/1	./.	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19686461	SNP-3.19684971.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.106-156C>A|159|LOC_Os03g35520|protein_coding|CODING|LOC_Os03g35520.1|2|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19686821	SNP-3.19685331.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Cag/Gag|p.Gln104Glu/c.310A>G|159|LOC_Os03g35520|protein_coding|CODING|LOC_Os03g35520.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/1	0/0	0/1	1/1	./.	0/0	0/0	0/0	1/1	./.	./.	./.	0/1	0/0	0/1	0/1	0/0	./.	1/1	./.	1/1	0/0	0/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	./.	./.	0/0	./.	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/1	./.	1/1	0/0	0/0	0/0	0/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	1/1	0/0	1/1
+3	19686986	SNP-3.19685496.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Gtc/Atc|p.Val159Ile/c.475C>A|159|LOC_Os03g35520|protein_coding|CODING|LOC_Os03g35520.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19687520	SNP-3.19686030.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/1	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	./.	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	0/1	0/0
+3	19688121	SNP-3.19686631.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	./.	0/0	./.	./.	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	./.	./.	1/1	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	19688841	SNP-3.19687351.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	./.	1/1	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	19690754	SNP-3.19689264.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	./.	0/1	1/1	1/1	0/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	./.	1/1	0/0
+3	19690846	SNP-3.19689356.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	./.	0/0	1/1	0/0	0/0	0/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	19698612	SNP-3.19697122.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	1/1	1/1	0/1	./.	./.	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/1	./.	1/1	0/1	1/1	1/1	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	./.	0/0	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	./.	./.	1/1	0/0	0/0	0/0	./.	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1
+3	19702588	SNP-3.19701098.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/1	1/1	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	./.	0/1	0/1	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/1	0/1	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/1	0/0	1/1	0/0
+3	19703781	SNP-3.19702291.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	1/1	0/0	1/1	./.	0/0	./.	1/1	1/1	1/1	0/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/1	0/0	0/1	0/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	./.	0/0	1/1	./.
+3	19704698	SNP-3.19703208.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/1	./.	0/0	./.	1/1	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/1	./.	./.	./.	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/1	./.	./.	0/0	0/0	./.	./.	0/1	0/0	0/0	./.	0/1	0/0	0/1	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/1	./.	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	./.	0/0	0/0	./.	./.	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0
+3	19705578	SNP-3.19704088.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/1	./.	0/0	./.	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/1	1/1	0/0	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	0/0	./.	0/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/1	./.	1/1	0/0	0/1	./.	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/1	./.	./.	1/1	./.	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	1/1	1/1	1/1	./.	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0
+3	19707481	SNP-3.19705991.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	0/0	./.	./.	1/1	1/1	./.	0/0	./.	0/0	./.	0/0	1/1	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	1/1	0/0
+3	19716025	SNP-3.19714535.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	1/1	./.	1/1	0/1	0/0	0/0	1/1	1/1	1/1	0/1	./.	0/0	0/1	0/0	1/1	./.	0/0	1/1	0/0	0/1	0/1	0/0	0/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	./.	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	./.	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/1	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	0/0	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/1	0/0	./.	./.	0/0	0/1	0/0	0/0	0/0	0/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/1	0/0	0/0	./.	0/0
+3	19716093	SNP-3.19714603.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/1	0/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/1	0/0	0/1	0/1	0/0	0/1	0/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19717564	SNP-3.19716074.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	0/0	./.	1/1	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	./.	./.	./.	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0
+3	19717948	SNP-3.19716458.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/1	0/0	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	./.	0/1	1/1	0/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/1	1/1	./.	./.	0/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19718204	SNP-3.19716714.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	1/1	0/0	1/1	./.	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	1/1	0/1	./.	0/0	0/0	0/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19718527	SNP-3.19717037.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	19718720	SNP-3.19717230.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/1	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	./.	0/1	0/0	1/1	0/0	1/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	./.	./.	0/1	./.	0/0	0/1	0/0	1/1	1/1	0/1	1/1	0/1	0/0	0/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	./.	0/0	./.	1/1	0/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	./.	0/0
+3	19719018	SNP-3.19717528.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	./.	1/1	./.	./.	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	./.	1/1	./.	1/1	0/0	1/1	./.	./.	1/1	1/1	0/0	./.	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	./.	0/0
+3	19719052	SNP-3.19717562.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	./.	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	./.	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	./.	./.	0/0	./.	0/0	./.	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19720745	SNP-3.19719255.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|gcC/gcG|p.Ala224Ala/c.672A>G|642|LOC_Os03g35570|protein_coding|CODING|LOC_Os03g35570.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	./.	./.	./.	1/1	1/1	./.	1/1	1/1	0/0	./.	1/1	1/1	./.	./.	0/0	1/1	1/1	./.	1/1	1/1	./.	0/0	./.	1/1	./.	./.	./.	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	./.	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	./.	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	./.	./.	1/1	./.	./.	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	./.	./.	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	./.	0/0	./.	0/0	./.	./.	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	./.	0/0	0/0	1/1
+3	19720838	SNP-3.19719348.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|caG/caA|p.Gln255Gln/c.765C>A|642|LOC_Os03g35570|protein_coding|CODING|LOC_Os03g35570.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/1	0/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	1/1	0/1	0/1	./.	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	./.	0/0	./.	1/1	0/0
+3	19721419	SNP-3.19719929.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.1291-22C>A|642|LOC_Os03g35570|protein_coding|CODING|LOC_Os03g35570.1|2|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	./.	./.	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	./.	1/1	1/1	0/0	./.	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	./.	0/0	0/1	0/1	./.	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/1	./.	1/1	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19721460	SNP-3.19719970.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aGt/aAt|p.Ser437Asn/c.1310C>A|642|LOC_Os03g35570|protein_coding|CODING|LOC_Os03g35570.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	1/1	0/0	./.	0/0	0/0	0/1	0/1	1/1	./.	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	./.	0/1	0/1	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	19721861	SNP-3.19720371.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Ttc/Gtc|p.Phe571Val/c.1711A>G|642|LOC_Os03g35570|protein_coding|CODING|LOC_Os03g35570.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	1/1	./.	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	./.	./.	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0
+3	19721975	SNP-3.19720485.	C	A	.	.	PR;EFF=synonymous_variant(LOW||Agt/Agt|p.Ser609Ser/c.1825C>A|642|LOC_Os03g35570|protein_coding|CODING|LOC_Os03g35570.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	./.	1/1	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/1	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0
+3	19722889	SNP-3.19721399.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	19723107	SNP-3.19721617.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1
+3	19723127	SNP-3.19721637.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	./.	1/1	./.	0/0	0/0	./.	1/1	./.	./.	./.	1/1	./.	0/0	./.	0/0	1/1	./.	0/0	0/0	1/1	0/0	1/1	./.	./.	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	./.	0/0	./.	./.	0/0	./.	./.	0/0	./.	0/0	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	0/0	1/1	./.	0/0	./.	0/0	0/0	1/1	0/0	1/1	./.	0/0	./.	1/1	1/1	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.
+3	19723998	SNP-3.19722508.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gaA/gaC|p.Glu420Asp/c.1260T>C|497|LOC_Os03g35580|protein_coding|CODING|LOC_Os03g35580.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	19724422	SNP-3.19722932.	A	G	.	.	PR;EFF=synonymous_variant(LOW||cCa/cCa|p.Pro279Pro/c.836T>C|497|LOC_Os03g35580|protein_coding|CODING|LOC_Os03g35580.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	./.	0/0	./.	0/0	./.	./.	1/1	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	./.	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	./.	0/0	./.	./.	1/1	./.	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0
+3	19724860	SNP-3.19723370.	A	G	.	.	PR;EFF=synonymous_variant(LOW||Cgg/Cgg|p.Arg199Arg/c.595T>C|497|LOC_Os03g35580|protein_coding|CODING|LOC_Os03g35580.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/0	0/0	0/1	./.	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/1	1/1	./.	1/1	0/0	1/1	1/1	./.	./.	0/0	0/0	0/1	1/1	0/0	1/1	./.	1/1	1/1	./.	./.	0/0	0/1	0/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	1/1	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	0/1	1/1	./.	1/1	0/0	./.	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/1	0/0	0/1	1/1	1/1	./.	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	1/1	./.	1/1	0/0	./.	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1
+3	19725751	SNP-3.19724261.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	19727065	SNP-3.19725575.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gaT/gaA|p.Asp27Glu/c.81C>A|868|LOC_Os03g35600|protein_coding|CODING|LOC_Os03g35600.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	1/1	0/1	0/0	0/0	0/1	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	./.	0/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	0/1	./.	./.	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	0/1	0/1	./.	0/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	./.	0/0	./.	0/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	./.	1/1	0/0	./.	0/0	./.	./.	0/0
+3	19727730	SNP-3.19726240.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cGg/cAg|p.Arg249Gln/c.746C>A|868|LOC_Os03g35600|protein_coding|CODING|LOC_Os03g35600.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	./.	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	19731749	SNP-3.19730259.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	1/1	1/1	./.	./.	0/0	1/1	1/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	./.	1/1	0/0	1/1	0/0	./.	1/1	./.	./.	1/1	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	0/0	./.	./.	./.	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1
+3	19731783	SNP-3.19730293.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	0/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	0/1	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	19732132	SNP-3.19730642.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	./.	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	0/0	0/1	1/1	0/0	1/1	1/1	./.	0/0	1/1	1/1	1/1	./.	./.	1/1	./.	0/0	0/0	0/0	0/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	./.	./.	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/1	./.	0/1	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	19734634	SNP-3.19733144.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	0/0	1/1	1/1	0/0	1/1	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	19735124	SNP-3.19733634.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0
+3	19735146	SNP-3.19733656.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1
+3	19741750	SNP-3.19740260.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.508-571G>T|417|LOC_Os03g35640|protein_coding|CODING|LOC_Os03g35640.1|4|1)	GT	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	./.	0/0	0/0	0/0	0/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/1	./.	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	./.	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/1	0/0
+3	19744116	SNP-3.19742626.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	./.	1/1	0/1	0/0	0/0	1/1	1/1	1/1	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	1/1	1/1	./.	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	./.	0/0
+3	19744886	SNP-3.19743396.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	0/0	./.	./.	1/1	0/0	./.	./.	./.	./.	./.	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	./.	./.	./.	0/0	./.	./.	0/0	./.	0/0	1/1	0/0	./.	0/0	./.	./.	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	./.	./.	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	./.	1/1	1/1	1/1	./.	./.	0/0	./.	./.	0/0	./.	0/0	0/0	./.	0/0	./.	./.	0/0	1/1	./.	./.	0/0	1/1	./.	0/0	0/0	0/0	./.	./.	0/0	./.	./.	0/0	1/1	1/1	./.	0/0	0/0	./.	1/1	0/0	1/1	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	./.	0/0	1/1	./.	./.	1/1	./.	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	./.
+3	19747751	SNP-3.19746261.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.112-457C>A|134|LOC_Os03g35650|protein_coding|CODING|LOC_Os03g35650.1|2|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/1	0/0	1/1	0/0	1/1	1/1	0/1	1/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	19747918	SNP-3.19746428.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.112-290C>A|134|LOC_Os03g35650|protein_coding|CODING|LOC_Os03g35650.1|2|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	0/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	./.	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	0/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	1/1	1/1	0/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0
+3	19751038	SNP-3.19749548.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	0/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	19762971	SNP-3.19761481.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/1	1/1	1/1	0/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	./.	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	0/0	./.	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	1/1
+3	19763222	SNP-3.19761732.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	0/0	./.	0/0	./.	./.	0/1	./.	1/1	0/0	0/0	./.	0/0	./.	0/1	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	1/1	./.	0/1	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	./.	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0
+3	19764705	SNP-3.19763215.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19765552	SNP-3.19764062.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	./.	./.	./.	./.	./.	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	./.	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/1	0/0	1/1	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	1/1	0/0	./.	1/1	0/0	./.	./.	0/0	0/0	1/1	1/1	./.	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	19766171	SNP-3.19764681.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	./.	0/0	1/1	./.	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	./.	./.	0/0	1/1	./.	1/1	0/0	1/1	0/0	./.	0/0	1/1	./.	0/0	1/1	./.	0/0	0/0	./.	./.	0/0	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	19767442	SNP-3.19765952.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Ttg/Atg|p.Leu119Met/c.355C>A|798|LOC_Os03g35690|protein_coding|CODING|LOC_Os03g35690.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	./.	./.	1/1	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	./.	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	./.	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	./.
+3	19770398	SNP-3.19768908.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19777683	SNP-3.19776193.	A	G	.	.	PR;EFF=synonymous_variant(LOW||Cag/Cag|p.Gln293Gln/c.877T>C|506|LOC_Os03g35710|protein_coding|CODING|LOC_Os03g35710.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	./.	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	1/1	0/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/1	1/1	1/1	./.	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	./.	0/1	0/0	0/0	0/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	./.	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	./.	0/0	0/0	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1
+3	19777886	SNP-3.19776396.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.776-102T>C|506|LOC_Os03g35710|protein_coding|CODING|LOC_Os03g35710.1|4|1)	GT	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	1/1	./.	./.	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	./.	1/1	./.	0/0	1/1	0/0	0/0	./.	1/1	./.	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	./.	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	./.	0/0	1/1	1/1	1/1	./.	./.	./.	./.	1/1	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0
+3	19777977	SNP-3.19776487.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.775+26G>T|506|LOC_Os03g35710|protein_coding|CODING|LOC_Os03g35710.1|4|1)	GT	./.	1/1	./.	1/1	0/0	./.	0/0	1/1	1/1	1/1	./.	./.	./.	0/1	./.	1/1	./.	./.	1/1	./.	./.	./.	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	./.	0/1	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/1	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/1	0/0	0/1	./.	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/1	0/0	1/1	0/0	./.	0/0	./.	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	./.	1/1	0/0
+3	19778078	SNP-3.19776588.	C	A	.	.	PR;EFF=stop_gained(HIGH|NONSENSE|Gag/Tag|p.Glu234*/c.700G>T|506|LOC_Os03g35710|protein_coding|CODING|LOC_Os03g35710.1|4|1);LOF=(LOC_Os03g35710|LOC_Os03g35710|1|1.00);NMD=(LOC_Os03g35710|LOC_Os03g35710|1|1.00)	GT	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/1	0/0	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	./.	./.	./.	0/0	0/1	0/1	0/1	0/1	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	./.	0/0	0/1	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	./.	1/1	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	./.	1/1	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	./.	0/0	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	./.	./.	0/1	0/0	1/1	0/0	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/1	0/1	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	./.	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	./.	./.	./.	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/1
+3	19785679	SNP-3.19784189.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.885+96T>C|326|LOC_Os03g35720|protein_coding|CODING|LOC_Os03g35720.1|1|1)	GT	./.	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	./.	0/1	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	0/0	./.	1/1	1/1	1/1	./.	./.	1/1	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	./.	0/0	./.	0/0	0/0	0/1	0/0	0/0	./.	1/1	1/1	1/1	./.	0/0	./.	./.	0/1	0/0	0/0	./.	0/1	./.	./.	0/0	./.	1/1	1/1	0/0	./.	./.	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	./.	1/1	0/0	1/1
+3	19786568	SNP-3.19785078.	C	A	.	.	PR;EFF=synonymous_variant(LOW||cTt/cTt|p.Leu31Leu/c.92G>T|326|LOC_Os03g35720|protein_coding|CODING|LOC_Os03g35720.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	19787590	SNP-3.19786100.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	./.	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	0/0	./.	0/0	1/1	1/1	./.	0/0	./.	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	./.	./.	./.	./.	./.	./.	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0
+3	19788235	SNP-3.19786745.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	0/0	0/0	./.	1/1	./.	0/0	1/1	0/0	1/1	1/1	./.	./.	0/0	1/1	1/1	0/0	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	./.	./.	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	./.	./.	0/0	./.	./.	0/0	./.	0/0	1/1	1/1	./.	0/0	./.	0/0	./.	./.	1/1	0/0	1/1	./.	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	./.	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	1/1	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	./.
+3	19788877	SNP-3.19787387.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	./.	./.	0/0	0/0	0/0	1/1	./.	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	./.	./.	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/0	./.	1/1	0/0	./.	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	0/0	./.	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	19789181	SNP-3.19787691.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	./.	0/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/1	0/1	1/1	0/0
+3	19790313	SNP-3.19788823.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/1	1/1	./.	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	./.	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	./.	1/1	0/0
+3	19793580	SNP-3.19792090.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/1	0/1	./.	1/1	0/0	1/1	./.	0/1	1/1	./.	0/1	./.	0/1	./.	1/1	./.	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/1	./.	./.	1/1	0/0	./.	0/0	1/1	./.	0/1	./.	0/0	0/0	0/0	0/1	1/1	0/0	1/1	1/1	./.	1/1	0/1	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19794579	SNP-3.19793089.	C	A	.	.	PR;EFF=synonymous_variant(LOW||caA/caA|p.Gln51Gln/c.153C>A|659|LOC_Os03g35730|protein_coding|CODING|LOC_Os03g35730.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	0/1	0/1	0/1	0/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	0/0	1/1	0/0	1/1	./.	0/1	0/0	0/0	0/0	1/1	./.	./.	./.	./.	./.	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	19795654	SNP-3.19794164.	C	A	.	.	PR;EFF=synonymous_variant(LOW||cAc/cAc|p.His383His/c.1148C>A|659|LOC_Os03g35730|protein_coding|CODING|LOC_Os03g35730.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	0/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	19796643	SNP-3.19795153.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gGa/gAa|p.Gly509Glu/c.1526C>A|659|LOC_Os03g35730|protein_coding|CODING|LOC_Os03g35730.1|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	./.	0/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	./.	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	1/1	0/1	0/0	./.	0/0	./.	0/1	./.	0/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	./.	./.	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	./.	0/0
+3	19796959	SNP-3.19795469.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|gtC/gtG|p.Val614Val/c.1842A>G|659|LOC_Os03g35730|protein_coding|CODING|LOC_Os03g35730.1|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/1	1/1	0/0	1/1	0/0	1/1	0/0	0/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/1	./.	0/0	0/0	./.	./.	./.	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/1	./.	./.	1/1	1/1	0/0	0/0	0/1	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	./.	0/0	0/0	0/0
+3	19798380	SNP-3.19796890.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19799905	SNP-3.19798415.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.2695+46T>C|1152|LOC_Os03g35740|protein_coding|CODING|LOC_Os03g35740.1|5|1)	GT	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	./.	1/1	1/1	./.	0/1	0/0	./.	0/1	0/0	1/1	1/1	./.	0/1	0/0	./.	1/1	./.	1/1	./.	./.	1/1	0/1	./.	1/1	1/1	1/1	1/1	0/1	./.	0/0	0/1	./.	0/1	0/1	1/1	./.	./.	1/1	1/1	0/0	0/1	./.	./.	0/0	0/1	0/0	0/1	0/1	1/1	0/1	0/0	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1	./.	1/1	0/1	1/1	0/1	./.	0/0	0/0	1/1	1/1	./.	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	./.	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1
+3	19801185	SNP-3.19799695.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Cgg/Tgg|p.Arg579Trp/c.1735G>T|1152|LOC_Os03g35740|protein_coding|CODING|LOC_Os03g35740.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/1	1/1	1/1	0/0	0/1	0/0	1/1	1/1	1/1	1/1	0/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0
+3	19805029	SNP-3.19803539.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	./.	./.	./.	./.	1/1	./.	./.	./.	./.	./.	1/1	1/1	1/1	./.	0/0	./.	./.	./.	./.	./.	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	./.	./.	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	19805536	SNP-3.19804046.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	0/0	./.	1/1	1/1	0/0	0/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	./.	./.	0/0	./.	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	./.	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	19808714	SNP-3.19807224.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/1	0/0	./.	0/0	0/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	0/0	./.	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/1	0/0	0/0	./.	./.	0/0	./.	./.	1/1	0/0	0/0	./.	0/1	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	19810983	SNP-3.19809493.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	./.	0/0	./.	1/1	./.	0/0	0/0	0/0	./.	./.	./.	1/1	./.	0/0	./.	1/1	0/0	./.	1/1	./.	./.	0/0	./.	./.	./.	./.	./.	./.	1/1	./.	./.	./.	./.	1/1	0/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	0/1	0/1	0/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	./.	./.	./.	./.	1/1	1/1	0/0	1/1	0/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	./.	0/0	./.	./.	1/1	./.	1/1	1/1	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	0/0	1/1	./.	./.	./.	1/1	1/1	./.	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1
+3	19811307	SNP-3.19809817.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	./.	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	1/1	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1
+3	19815261	SNP-3.19813771.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	1/1	0/1	0/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	./.	0/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/1	./.	0/1	./.	0/0	0/0	1/1	./.	0/0	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19816969	SNP-3.19815479.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	1/1	1/1	./.	0/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/1	0/0	1/1	1/1	0/1	0/1	1/1	0/0	0/1	1/1	1/1	1/1	./.	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1	./.	./.	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/1	./.	1/1	0/0
+3	19821451	SNP-3.19819961.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	./.	0/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	0/0	1/1	./.	./.	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	./.	1/1	./.	1/1	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	./.	./.	1/1	0/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	1/1	1/1	./.	./.	1/1	./.	1/1	./.	0/0	./.	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	./.	1/1	0/0	1/1	./.	./.	./.	1/1	1/1	1/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	./.	./.	0/0	1/1
+3	19823020	SNP-3.19821530.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1	./.	0/0	1/1	./.	0/0	./.	./.	./.	0/0	./.	0/0	1/1	1/1	./.	0/0	1/1	0/0	./.	0/0	1/1	1/1	./.	1/1	./.	0/0	1/1	0/0	./.	0/0	./.	0/0	1/1	./.	1/1	./.	1/1	0/0	./.	0/0	./.	0/0	./.	1/1	1/1	./.	1/1	1/1	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	./.	1/1	1/1	0/0	./.	1/1	./.	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	./.	./.	1/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	0/0	1/1	0/0	./.	0/0	./.	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.
+3	19825097	SNP-3.19823607.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	./.	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	1/1	./.	1/1	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	./.	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	./.	./.	./.	0/0	./.	1/1	0/0	0/0	0/0	./.	1/1	0/0	1/1	./.	0/0	0/0	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	./.	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	19825898	SNP-3.19824408.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	./.	0/0	1/1	0/0	0/0	0/1	0/1	0/0	0/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/1	./.	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	1/1	1/1	1/1	0/1	1/1
+3	19827035	SNP-3.19825545.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	0/0	./.	1/1	./.	0/0	1/1	0/0	1/1	1/1	./.	./.	0/0	0/0	1/1	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	./.	0/0	1/1	./.	./.	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	./.	./.	0/0	./.	1/1	./.	./.	0/0	./.	1/1	0/0	0/0	1/1	1/1	./.	./.	./.	./.	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	0/0	./.	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1
+3	19827178	SNP-3.19825688ct.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	0/0	./.	1/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0
+3	19827206	SNP-3.19825716.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	./.	./.	./.	0/0	./.	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	0/0	./.	0/0	./.	1/1	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	./.	1/1	0/0	./.	1/1	0/0	1/1	./.	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	19831789	SNP-3.19830299.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19832788	SNP-3.19831298.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	./.	0/1	0/1	0/1	./.	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	./.	0/0	./.	0/0	0/1	./.	./.	0/0	0/0	0/0	0/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/1	1/1	0/0
+3	19834159	SNP-3.19832669.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gGt/gCt|p.Gly1767Ala/c.5300T>C|1907|LOC_Os03g35788|protein_coding|CODING|LOC_Os03g35788.1|7|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	19834518	SNP-3.19833028.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|gtC/gtT|p.Val1647Val/c.4941G>T|1907|LOC_Os03g35788|protein_coding|CODING|LOC_Os03g35788.1|7|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	./.	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/1	./.	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	./.	0/0	0/0	./.	0/0	1/1	0/0
+3	19834644	SNP-3.19833154.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|acC/acT|p.Thr1605Thr/c.4815G>T|1907|LOC_Os03g35788|protein_coding|CODING|LOC_Os03g35788.1|7|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	./.	0/0	1/1	0/0	./.	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	./.	0/0	1/1	1/1	./.	./.	0/0	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	0/0	1/1	0/0	./.	./.	1/1	0/0	1/1	./.	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	./.	./.	./.	1/1	0/0	./.	1/1	1/1	./.	./.	0/0	1/1	1/1	0/0	1/1	0/0	./.	1/1	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	./.	0/0	0/0	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	./.	0/0
+3	19834860	SNP-3.19833370.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.4688-89T>C|1907|LOC_Os03g35788|protein_coding|CODING|LOC_Os03g35788.1|6|1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	19834876	SNP-3.19833386.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.4688-105G>T|1907|LOC_Os03g35788|protein_coding|CODING|LOC_Os03g35788.1|6|1)	GT	./.	1/1	0/0	./.	0/0	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	1/1	./.	0/0	1/1	0/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	./.	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	./.	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	0/0	./.	1/1	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/1	./.	0/0	1/1	0/0
+3	19835332	SNP-3.19833842.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Gga/Cga|p.Gly1480Arg/c.4438T>C|1907|LOC_Os03g35788|protein_coding|CODING|LOC_Os03g35788.1|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	0/0	1/1	1/1	0/1	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	1/1	0/1	./.	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	./.	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	0/0	1/1	0/0	./.	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	1/1	1/1	0/0	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	1/1	0/0	1/1	0/0	1/1
+3	19836206	SNP-3.19834716.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.4386+204G>T|1907|LOC_Os03g35788|protein_coding|CODING|LOC_Os03g35788.1|5|1)	GT	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/1	0/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/1	./.	./.	0/0	./.	0/1	1/1	1/1	1/1	./.	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	0/0	./.	0/0	1/1	./.	1/1	0/0	0/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	0/1	./.	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19836924	SNP-3.19835434.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.4008+44G>T|1907|LOC_Os03g35788|protein_coding|CODING|LOC_Os03g35788.1|4|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/1	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19846674	SNP-3.19845184.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.111+19G>T|63|LOC_Os03g35810|protein_coding|CODING|LOC_Os03g35810.1|2|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/1	1/1	1/1	1/1	./.	0/1	0/1	./.	0/1	1/1	./.	./.	1/1	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	./.	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	./.	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/1	1/1	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19846719	SNP-3.19845229.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Cct/Tct|p.Pro29Ser/c.85G>T|63|LOC_Os03g35810|protein_coding|CODING|LOC_Os03g35810.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	19858269	SNP-3.19856779.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.2275-31G>T|775|LOC_Os03g35840|protein_coding|CODING|LOC_Os03g35840.1|5|1)	GT	0/0	1/1	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/1	0/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19858450	SNP-3.19856960.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Agc/Cgc|p.Ser711Arg/c.2131T>C|775|LOC_Os03g35840|protein_coding|CODING|LOC_Os03g35840.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/1	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/1	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	19859491	SNP-3.19858001.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.1266+83T>C|775|LOC_Os03g35840|protein_coding|CODING|LOC_Os03g35840.1|3|1)	GT	0/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	19860748	SNP-3.19859258.	A	G	.	.	PR;EFF=splice_region_variant(LOW|||c.128T>C|775|LOC_Os03g35840|protein_coding|CODING|LOC_Os03g35840.1|1|1),intron_variant(MODIFIER|||c.128-3T>C|775|LOC_Os03g35840|protein_coding|CODING|LOC_Os03g35840.1|1|1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	1/1	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/1	0/1	0/1	0/0	1/1	1/1	0/1	0/0	0/0	0/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1
+3	19861709	SNP-3.19860219.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	0/0	./.	./.	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	1/1	./.	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	0/0	./.	1/1	0/1	0/0	1/1	1/1	./.	./.	0/0	0/0	1/1	./.	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/1	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	19862076	SNP-3.19860586.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	19864083	SNP-3.19862593.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	0/0	0/1	0/1	./.	./.	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	./.	0/1	0/0	./.	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	./.	1/1	0/1	0/0	1/1	1/1	./.	1/1	./.	1/1	0/1	0/1	1/1	0/0	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	./.	1/1	0/0	./.	./.	1/1	1/1	1/1	./.	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	0/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0	1/1	1/1	0/0	1/1	1/1	./.	./.	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	./.	0/0	1/1	1/1	./.	./.	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/1	0/0	1/1
+3	19864785	SNP-3.19863295.	A	G	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||689|c.*571T>C|116|LOC_Os03g35849|protein_coding|CODING|LOC_Os03g35849.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME),3_prime_UTR_variant(MODIFIER||689|c.*512T>C|116|LOC_Os03g35849|protein_coding|CODING|LOC_Os03g35849.2|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	./.	0/0	0/1	0/1	0/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/1	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/1	1/1	0/1	0/0	./.	0/0	0/0	1/1	0/1	1/1	1/1	1/1	0/1	0/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	0/0	1/1	./.	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/1	0/0	0/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	./.	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/1	1/1	0/1	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	0/0	0/0	./.	1/1	0/0	0/0	0/1	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	./.	0/0	0/0	1/1	1/1	./.	0/0	1/1	./.	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	./.	0/0	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	./.	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1
+3	19865578	SNP-3.19864088.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Act/Tct|p.Thr83Ser/c.247G>T|116|LOC_Os03g35849|protein_coding|CODING|LOC_Os03g35849.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),missense_variant(MODERATE|MISSENSE|Act/Tct|p.Thr83Ser/c.247G>T|116|LOC_Os03g35849|protein_coding|CODING|LOC_Os03g35849.2|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	1/1	./.	0/0	./.	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	./.	./.	./.	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	./.	0/0	0/0	1/1	1/1	0/0
+3	19866828	SNP-3.19865338.	C	A	.	.	PR;EFF=5_prime_UTR_variant(MODIFIER||1004|c.-1004G>T|116|LOC_Os03g35849|protein_coding|CODING|LOC_Os03g35849.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),5_prime_UTR_variant(MODIFIER||1004|c.-1004G>T|116|LOC_Os03g35849|protein_coding|CODING|LOC_Os03g35849.2|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/1	./.	0/0	1/1	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	./.	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	./.	./.	0/0	0/0	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19866953	SNP-3.19865463.	C	A	.	.	PR;EFF=5_prime_UTR_variant(MODIFIER||1129|c.-1129G>T|116|LOC_Os03g35849|protein_coding|CODING|LOC_Os03g35849.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME),5_prime_UTR_variant(MODIFIER||1129|c.-1129G>T|116|LOC_Os03g35849|protein_coding|CODING|LOC_Os03g35849.2|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	./.	0/0	./.	0/0	./.	0/0	0/0	./.	./.	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	./.	0/0	1/1	./.	1/1	./.	1/1	0/0	./.	0/0	./.	1/1	./.	./.	./.	0/0	0/0	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	./.	./.	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	19868815	SNP-3.19867325.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	./.	./.	0/0	0/0	./.	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	./.	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	./.	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	./.	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0
+3	19869761	SNP-3.19868271.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/1	./.	./.	0/0	./.	1/1	0/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	1/1	0/0	1/1	0/1	./.	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	./.	1/1
+3	19871920	SNP-3.19870430.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1
+3	19871999	SNP-3.19870509.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/1	0/0	./.	0/0	0/0	0/0	1/1	./.	1/1	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	./.	0/1	./.	./.	1/1	0/0	0/1	./.	0/1	./.	0/1	./.	./.	./.	./.	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	0/1	0/0	1/1	1/1	./.	0/1	./.	0/1	1/1	1/1	0/1	0/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/1	0/0
+3	19872532	SNP-3.19871042.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	1/1	0/0	1/1	0/1	./.	0/0	1/1	1/1	1/1	0/0	1/1	0/1	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/1	0/1	./.	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	0/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	./.	0/1	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	./.	./.	0/0	./.	./.	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/1	./.	0/1	0/0	./.	0/0	0/0	0/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0
+3	19873068	SNP-3.19871578.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	./.	./.	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	./.	0/0	1/1	./.	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	./.	0/0	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	./.	1/1	./.	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0
+3	19873396	SNP-3.19871906.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/1	1/1	0/0	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	0/1	1/1	1/1	1/1	1/1	./.	0/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/1	0/1	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/1	./.	0/0
+3	19874408	SNP-3.19872918.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	1/1	0/1	1/1	0/1	1/1	0/0	1/1	./.	./.	./.	1/1	0/1	./.	0/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	0/0	1/1	0/1	1/1	0/1	0/1	0/0	./.	0/0	1/1	1/1	0/1	./.	./.	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	19877262	SNP-3.19875772.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	0/0	1/1	0/0	./.	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	1/1	./.	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	./.	./.	./.	1/1	1/1	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	./.	./.	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	./.	./.	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0
+3	19879414	SNP-3.19877924.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/1	./.	./.	0/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	1/1
+3	19879842	SNP-3.19878352.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	0/0	0/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	./.	1/1	0/0	1/1	./.	0/0	0/0	0/1	0/0	0/0	0/1	1/1	1/1	1/1	./.	0/0	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	./.	1/1	0/0
+3	19880957	SNP-3.19879467.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	./.	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	19881090	SNP-3.19879600.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	19885100	SNP-3.19883610.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Cct/Gct|p.Pro61Ala/c.181A>G|682|LOC_Os03g35860|protein_coding|CODING|LOC_Os03g35860.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	./.	./.	./.	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	19885279	SNP-3.19883789.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ttG/ttA|p.Leu120Leu/c.360C>A|682|LOC_Os03g35860|protein_coding|CODING|LOC_Os03g35860.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	./.	1/1	./.	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	1/1	1/1	0/0	./.	./.	0/0	./.	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	1/1	1/1	./.	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.
+3	19885950	SNP-3.19884460.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aTa/aAa|p.Ile344Lys/c.1031C>A|682|LOC_Os03g35860|protein_coding|CODING|LOC_Os03g35860.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	0/1	0/0	0/0	./.	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	./.	0/1	./.	0/1	0/1	./.	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	./.	./.	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/1	0/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	./.	0/0	1/1	0/1	0/0	1/1	0/1	1/1	0/0	0/1	1/1	0/1	./.	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/1	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0
+3	19886370	SNP-3.19884880.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gaC/gaA|p.Asp413Glu/c.1239C>A|682|LOC_Os03g35860|protein_coding|CODING|LOC_Os03g35860.1|2|1)	GT	./.	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	./.	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/1	0/0	0/0	./.	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	./.	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/1	./.	0/0	0/0	./.	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19886609	SNP-3.19885119.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.1381-44C>A|682|LOC_Os03g35860|protein_coding|CODING|LOC_Os03g35860.1|2|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/1	1/1	0/0	1/1	1/1	0/0	1/1	0/1	./.	0/1	0/1	./.	0/1	1/1	1/1	./.	1/1	0/1	0/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/1	0/0	./.	0/1	./.	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	./.	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0
+3	19886701	SNP-3.19885211.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Tca/Aca|p.Ser477Thr/c.1429C>A|682|LOC_Os03g35860|protein_coding|CODING|LOC_Os03g35860.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	1/1	1/1	0/0	1/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	1/1	0/0	1/1	0/0	0/1	1/1	1/1	0/0	0/1	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	./.	0/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19887075	SNP-3.19885585.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ttA/ttG|p.Leu552Leu/c.1656A>G|682|LOC_Os03g35860|protein_coding|CODING|LOC_Os03g35860.1|5|1)	GT	1/1	./.	0/0	0/0	0/0	0/1	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	0/0	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/1	1/1	./.	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	./.	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	./.	./.	1/1	0/0	./.	0/0	1/1	1/1	0/0	./.	1/1	./.	1/1	0/0	./.	0/0	./.	./.	1/1	0/0	1/1	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.
+3	19887290	SNP-3.19885800.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|cgC/cgG|p.Arg609Arg/c.1827A>G|682|LOC_Os03g35860|protein_coding|CODING|LOC_Os03g35860.1|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	./.	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	0/0	./.	./.	0/1	0/1	0/0	./.	./.	./.	0/1	./.	./.	0/0	./.	./.	./.	./.	1/1	1/1	0/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	./.	1/1	0/1	1/1	./.	./.	./.	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	./.	./.	1/1	0/0	1/1	./.	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	1/1	./.	0/1	0/0	1/1	0/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	0/1	0/0	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	./.	./.	./.	0/0	0/0	1/1	./.	0/0	0/0	1/1	./.	1/1	./.	0/0	./.	1/1	1/1	1/1	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	19887468	SNP-3.19885978.	C	A	.	.	PR;EFF=synonymous_variant(LOW||Aaa/Aaa|p.Lys669Lys/c.2005C>A|682|LOC_Os03g35860|protein_coding|CODING|LOC_Os03g35860.1|6|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	1/1	0/1	0/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	19887739	SNP-3.19886249.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	0/0	./.	./.	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	./.	0/1	1/1	./.	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/1	./.	0/0	./.	0/0	0/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	./.	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	./.	./.	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	./.	./.	./.	0/0	./.	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	1/1	./.	0/0	1/1	0/0
+3	19887755	SNP-3.19886265.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/1	0/0	1/1	0/0	0/0	0/0	./.	0/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	0/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/0	./.	0/0	0/0	1/1	0/0
+3	19891404	SNP-3.19889914.	A	G	.	.	PR;EFF=synonymous_variant(LOW||cCt/cCt|p.Pro944Pro/c.2831T>C|1590|LOC_Os03g35870|protein_coding|CODING|LOC_Os03g35870.1|7|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	1/1	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	./.	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/1	./.	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/1	0/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	1/1	0/0	0/1	1/1	0/0	1/1	0/0	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1
+3	19892516	SNP-3.19891026.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.2062-24G>T|1590|LOC_Os03g35870|protein_coding|CODING|LOC_Os03g35870.1|5|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	./.	0/0	1/1	1/1	./.	1/1	./.	0/0	./.	./.	./.	./.	./.	1/1	./.	./.	1/1	1/1	0/0	./.	0/0	0/0	1/1	./.	0/0	./.	0/0	./.	0/0	1/1	./.	0/0	0/0	0/0	./.	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	./.	./.	./.	1/1	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	1/1	1/1	./.	0/0	./.	./.	1/1	1/1	1/1	./.	./.	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	./.
+3	19892740	SNP-3.19891250.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|tAc/tTc|p.Tyr657Phe/c.1970G>T|1590|LOC_Os03g35870|protein_coding|CODING|LOC_Os03g35870.1|5|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/1	0/0	0/1	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	./.	./.	1/1	0/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	./.	1/1	0/0	./.	0/0	1/1	0/1	0/1	0/0	./.	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/1	1/1	0/1	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	19895384	SNP-3.19893894.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Gag/Cag|p.Glu3Gln/c.7T>C|1590|LOC_Os03g35870|protein_coding|CODING|LOC_Os03g35870.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	1/1	1/1	0/0	1/1	0/0	./.	./.	1/1	1/1	1/1	./.	0/0	./.	1/1	./.	./.	./.	0/0	./.	1/1	1/1	./.	0/0	./.	./.	1/1	./.	0/0	./.	./.	1/1	0/0	0/0	./.	0/0	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	1/1	1/1	./.	0/0	./.	./.	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	1/1	./.	./.	1/1	./.	0/0	0/0	./.	0/0	1/1	./.	1/1	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	./.	./.	1/1	1/1	0/0	1/1	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	./.	./.	1/1	1/1	1/1	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	./.
+3	19899833	SNP-3.19898343.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	0/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	0/0	1/1	./.	./.	./.	0/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	0/0	1/1	0/0	0/0	./.	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	./.	1/1	0/0
+3	19901647	SNP-3.19900157.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	1/1	./.	1/1	0/0	1/1	0/1	./.	./.	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/1	0/0	./.	0/0	./.	0/0	1/1	1/1	1/1	./.	./.	0/0	0/1	./.	0/1	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0
+3	19902294	SNP-3.19900804.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	1/1	0/0	1/1	0/0	./.	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	0/0	./.	0/0	./.	1/1	0/0	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0
+3	19904535	SNP-3.19903045.	A	G	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||3042|c.*3042T>C|64|LOC_Os03g35886|protein_coding|CODING|LOC_Os03g35886.1|2|1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	0/0	1/1	0/1	./.	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	./.	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	./.	1/1	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	./.	0/0	1/1	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	1/1	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1
+3	19905964	SNP-3.19904474.	C	A	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||1613|c.*1613G>T|64|LOC_Os03g35886|protein_coding|CODING|LOC_Os03g35886.1|2|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	./.	0/0
+3	19906300	SNP-3.19904810.	C	A	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||1277|c.*1277G>T|64|LOC_Os03g35886|protein_coding|CODING|LOC_Os03g35886.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	./.	0/0	./.	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	./.	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	./.	./.	0/0	1/1	1/1	./.	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	0/0	./.	1/1	./.	0/0	1/1	0/0	1/1	1/1	./.	./.	./.	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	0/0	./.	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19906507	SNP-3.19905017.	A	G	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||1070|c.*1070T>C|64|LOC_Os03g35886|protein_coding|CODING|LOC_Os03g35886.1|2|1)	GT	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	./.	0/0	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	./.	./.	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	./.	0/0	./.	./.	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	./.	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	./.
+3	19906601	SNP-3.19905111.	C	A	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||976|c.*976G>T|64|LOC_Os03g35886|protein_coding|CODING|LOC_Os03g35886.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	./.	./.	./.	1/1	./.	./.	0/0	./.	0/0	1/1	./.	0/0	1/1	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	./.	./.	./.	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	./.	./.	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	./.	./.	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	19906624	SNP-3.19905134.	A	G	.	.	PR;EFF=3_prime_UTR_variant(MODIFIER||953|c.*953T>C|64|LOC_Os03g35886|protein_coding|CODING|LOC_Os03g35886.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	19907698	SNP-3.19906208.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cAg/cTg|p.Gln25Leu/c.74G>T|64|LOC_Os03g35886|protein_coding|CODING|LOC_Os03g35886.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	1/1	1/1	0/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19908511	SNP-3.19907021.	A	G	.	.	PR;EFF=5_prime_UTR_variant(MODIFIER||740|c.-530T>C|64|LOC_Os03g35886|protein_coding|CODING|LOC_Os03g35886.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	19908967	SNP-3.19907477.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	0/0	1/1	0/1	0/0	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/1	./.	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0
+3	19909565	SNP-3.19908075.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/1	1/1	./.	0/0	0/0	0/0	0/0	./.	1/1	./.	./.	0/0	0/0	1/1	0/0	./.	1/1	1/1	1/1	./.	0/1	0/1	0/0	1/1	./.	1/1	0/1	./.	./.	./.	0/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/1	0/1	0/0	./.	0/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/1	1/1	0/0	0/0	0/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1
+3	19909852	SNP-3.19908362.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	./.	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	./.	./.	0/0	1/1	./.	1/1	./.	./.	0/0	0/0	1/1	1/1	0/0	./.	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	./.	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	19917770	SNP-3.19916280.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Aca/Tca|p.Thr664Ser/c.1990G>T|691|LOC_Os03g35910|protein_coding|CODING|LOC_Os03g35910.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	./.	./.	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	./.	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	1/1	0/0
+3	19917982	SNP-3.19916492.	A	G	.	.	PR;EFF=synonymous_variant(LOW||aCt/aCt|p.Thr593Thr/c.1778T>C|691|LOC_Os03g35910|protein_coding|CODING|LOC_Os03g35910.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	0/0	1/1	0/1	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	./.	0/1	0/1	0/0	0/0	0/1	0/1	./.	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	1/1	0/0	0/1	./.	./.	0/0	./.	0/1	1/1	0/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/1	1/1	1/1	1/1	0/1	0/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	./.	1/1	1/1	1/1	./.	0/1	0/1	0/0	0/0	0/1	0/0	./.	0/1	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	1/1	1/1	0/0	0/0
+3	19918171	SNP-3.19916681.	C	A	.	.	PR;EFF=synonymous_variant(LOW||cTa/cTa|p.Leu530Leu/c.1589G>T|691|LOC_Os03g35910|protein_coding|CODING|LOC_Os03g35910.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	1/1	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	./.	./.	0/1	0/1	1/1	0/0	./.	1/1	./.	0/1	./.	./.	1/1	./.	0/1	1/1	1/1	1/1	1/1	0/1	./.	0/1	./.	./.	0/0	1/1	0/1	1/1	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/0	./.	1/1	./.	0/1	1/1	1/1	1/1	1/1	./.	./.	0/1	./.	1/1	1/1	0/1	0/1	1/1	0/0	./.	0/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	./.	0/0
+3	19918273	SNP-3.19916783.	A	G	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gTc/gCc|p.Val496Ala/c.1487T>C|691|LOC_Os03g35910|protein_coding|CODING|LOC_Os03g35910.1|4|1)	GT	./.	0/0	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	./.	./.	./.	./.	1/1	0/0	1/1	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	1/1	./.	./.	1/1	1/1	0/0	1/1	./.	0/0	1/1	0/0	./.	0/0	1/1	./.	1/1	./.	./.	./.	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	./.	1/1	./.	0/0	0/0	./.	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	./.	0/0	0/0	1/1	./.	1/1	./.	./.	./.	1/1	1/1	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	./.	./.	0/0	./.	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	./.	./.	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0
+3	19918600	SNP-3.19917110.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|cAt/cTt|p.His409Leu/c.1226G>T|691|LOC_Os03g35910|protein_coding|CODING|LOC_Os03g35910.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/1	./.	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/1	1/1	./.	1/1	0/1	1/1	./.	1/1	0/1	0/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	0/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	19918707	SNP-3.19917217.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|acT/acC|p.Thr373Thr/c.1119T>C|691|LOC_Os03g35910|protein_coding|CODING|LOC_Os03g35910.1|3|1)	GT	./.	0/0	1/1	0/0	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/0	./.	./.	1/1	0/0	0/1	0/0	0/0	./.	1/1	1/1	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	0/1	./.	0/0	0/1	./.	./.	./.	./.	./.	./.	./.	./.	0/0	./.	0/0	0/1	1/1	0/0	0/0	./.	0/0	./.	1/1	0/1	./.	0/0	0/0	0/1	./.	1/1	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	./.	0/1	./.	1/1	1/1	0/1	0/0	0/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	./.	./.	1/1	1/1	0/1	1/1	1/1	1/1	0/0	0/1	0/0	1/1	0/0	0/0	1/1	0/1	./.	1/1	./.	0/1	0/1	0/0	0/0	1/1	0/0	0/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	./.	1/1	./.	0/0	0/1
+3	19919419	SNP-3.19917929.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gAa/gTa|p.Glu234Val/c.701G>T|691|LOC_Os03g35910|protein_coding|CODING|LOC_Os03g35910.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/1	./.	0/0	./.	0/1	0/0	0/1	1/1	0/0	./.	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/1	0/0	0/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	./.	1/1	1/1	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0
+3	19920044	SNP-3.19918554.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Att/Ttt|p.Ile26Phe/c.76G>T|691|LOC_Os03g35910|protein_coding|CODING|LOC_Os03g35910.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	./.	0/0	1/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	./.	0/0	./.	1/1	./.	0/0	./.	0/0	./.	1/1	./.	0/0	./.	0/0	0/0	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	./.	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0
+3	19921742	SNP-3.19920252.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/1	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/1	1/1	./.	0/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/1	1/1	0/0	0/0	0/1	0/0	./.	0/0	0/1	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/1	0/0	0/0	0/0	1/1	0/0
+3	19922833	SNP-3.19921343.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	0/1	0/0	./.	0/1	./.	./.	0/1	0/0	0/0	./.	0/0	0/1	0/0	./.	./.	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	./.	0/0	1/1	./.	1/1	1/1	1/1	1/1	0/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/1	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/1	./.	0/0	0/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0
+3	19922943	SNP-3.19921453.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	19924759	SNP-3.19923269.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	./.	0/0	./.	0/0	0/0	./.	1/1	0/0	1/1	0/0	./.	./.	./.	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	./.	1/1	./.	./.	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	1/1	1/1	./.	0/0	./.	./.	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	0/0	1/1	1/1	0/0	1/1	./.	./.	0/0	0/0	1/1	./.	0/0	./.	0/0	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	0/0	1/1	1/1	./.	./.	1/1	1/1	1/1	0/0	./.	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	./.	./.	1/1	1/1	./.	./.	./.	./.	1/1	./.	./.	0/0	0/0	0/0	1/1	0/0	./.	./.	./.	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	1/1
+3	19924786	SNP-3.19923296.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	19929387	SNP-3.19927897.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	1/1	./.	./.	1/1	./.	./.	1/1	0/0	./.	1/1	1/1	0/0	./.	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	1/1	0/0	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0
+3	19929707	SNP-3.19928217.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	./.	./.	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	./.	./.	0/0	1/1	0/0
+3	19930698	SNP-3.19929208.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/1	./.	0/0	1/1	./.	0/1	0/0	0/0	0/0	1/1	0/1	0/1	1/1	./.	0/0	1/1	0/0	0/0	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	0/1	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	1/1	0/0	1/1	./.	0/0	1/1	1/1	1/1	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0
+3	19931769	SNP-3.19930279.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/1	1/1	0/1	0/1	0/1	0/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	./.	0/0	1/1	./.	0/1	0/1	./.	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	./.	0/0	0/0	./.	./.	0/0	./.	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	19932125	SNP-3.19930635.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	./.	1/1	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/1	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	1/1	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19932245	SNP-3.19930755.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	./.	./.	0/0	1/1	./.	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/1	./.	0/0	./.	0/1	./.	1/1	./.	0/0	./.	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	0/1	./.	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	./.	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	./.	0/0	./.	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	./.	./.	./.	./.	1/1	./.	./.	0/0	1/1	./.	./.	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1
+3	19935876	SNP-3.19934386.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/1	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/1	0/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	0/1	./.	0/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/0	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19936724	SNP-3.19935234.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|gCa/gAa|p.Ala188Glu/c.563C>A|262|LOC_Os03g35930|protein_coding|CODING|LOC_Os03g35930.1|1|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	./.	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	./.	./.	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/1	0/1	1/1	0/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	1/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	./.	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	19939524	SNP-3.19938034.	A	G	.	.	PR;EFF=synonymous_variant(LOW||cGa/cGa|p.Arg498Arg/c.1493A>G|649|LOC_Os03g35940|protein_coding|CODING|LOC_Os03g35940.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	./.	0/0	1/1	0/0	0/1	./.	./.	0/0	0/0	0/0	./.	./.	./.	./.	0/1	0/0	1/1	./.	0/0	1/1	./.	0/0	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	./.	1/1	./.	0/1	./.	./.	./.	0/1	0/1	0/0	1/1	1/1	0/1	./.	1/1	0/1	0/1	./.	./.	0/0	1/1	1/1	0/1	0/0	0/1	0/0	1/1	./.	./.	0/1	0/0	0/0	1/1	1/1	0/0	0/1	0/1	1/1	1/1	./.	1/1	1/1	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	./.	1/1	0/1	0/0	./.	0/0	1/1	1/1	1/1	./.	./.	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/1	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	./.	./.	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	./.	./.	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	0/0	1/1
+3	19941914	SNP-3.19940424.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/1	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	./.	0/0	1/1	./.	./.	1/1	0/0	0/0	0/1	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/1	./.	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/1	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	./.	0/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/1	0/1	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19942216	SNP-3.19940726.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	19944547	SNP-3.19943057.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	19944661	SNP-3.19943171.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	0/0	1/1	./.	0/0	0/0	1/1	./.	0/0	0/1	0/0	0/0	1/1	0/0	0/0	1/1	0/1	1/1	0/0	0/0	1/1	0/1	1/1	1/1	./.	1/1	0/1	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	0/0	0/0	0/1	0/0	./.	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/1	1/1	1/1	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	19948191	SNP-3.19946701.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Tct/Act|p.Ser121Thr/c.361C>A|126|LOC_Os03g35950|protein_coding|CODING|LOC_Os03g35950.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	./.	0/0	./.	1/1	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	0/0	./.	./.	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	0/1	1/1	1/1	1/1	0/1	./.	0/1	1/1	./.	1/1	1/1	1/1	0/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/1	1/1	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19948632	SNP-3.19947142.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	1/1	0/1	0/0	1/1	0/0	./.	0/0	./.	./.	0/0	0/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	./.	0/1	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/0	1/1	1/1	1/1	./.	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0
+3	19948939	SNP-3.19947449.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	0/1	./.	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	1/1	0/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	19949392	SNP-3.19947902.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	0/0	1/1	0/1	0/1	./.	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/1	0/0	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/1	0/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	./.	0/0	./.	0/1	0/0	0/0	0/0
+3	19952853	SNP-3.19951363.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Aac/Tac|p.Asn126Tyr/c.376G>T|425|LOC_Os03g35970|protein_coding|CODING|LOC_Os03g35970.1|4|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	./.	./.	1/1	./.	0/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	0/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	0/1	./.	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0
+3	19953252	SNP-3.19951762.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|Acg/Tcg|p.Thr39Ser/c.115G>T|425|LOC_Os03g35970|protein_coding|CODING|LOC_Os03g35970.1|2|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	0/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0
+3	19956745	SNP-3.19955255.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	./.	./.	./.	0/0	0/1	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/1	0/1	./.	./.	0/0	0/0	1/1	0/0	0/1	./.	0/0	0/0	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	./.	0/0	0/0	1/1	./.	0/0	./.	1/1	0/0	1/1	0/0	0/0	./.	./.	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	./.	./.	1/1	0/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	0/0	./.	1/1	1/1	0/0	0/0	0/1	0/1	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	0/1	./.	0/0	./.	0/0	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	19957190	SNP-3.19955700.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	./.	0/0	1/1	./.	0/1	0/0	0/0	0/0	./.	1/1	1/1	0/1	./.	0/0	1/1	./.	0/0	./.	0/1	1/1	1/1	./.	0/1	1/1	./.	1/1	./.	1/1	./.	./.	1/1	./.	1/1	1/1	./.	0/1	1/1	0/0	1/1	./.	./.	./.	1/1	./.	1/1	./.	1/1	0/0	./.	./.	1/1	0/0	./.	0/0	1/1	1/1	1/1	./.	0/0	0/0	./.	1/1	0/0	./.	0/1	0/1	1/1	1/1	1/1	./.	./.	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	./.	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	./.	./.	0/0	1/1	1/1	0/0	1/1	./.	0/0	1/1	0/0	1/1	1/1	0/0	./.	1/1	1/1	0/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	./.	0/0	0/1	0/0	1/1	0/1	./.	./.	1/1	1/1	./.	0/0	0/0	0/0	1/1	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	./.	0/0	./.	./.	0/0	1/1
+3	19957532	SNP-3.19956042.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	./.	0/0	1/1	0/0	./.	0/1	1/1	0/0	0/0	0/0	./.	./.	0/1	0/1	0/1	0/0	0/0	1/1	0/0	./.	./.	1/1	0/1	0/0	./.	1/1	./.	./.	1/1	1/1	./.	./.	1/1	./.	0/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	./.	1/1	0/1	./.	0/1	./.	1/1	0/0	./.	./.	./.	0/0	1/1	0/0	1/1	1/1	0/1	./.	./.	0/0	0/1	1/1	0/0	./.	./.	1/1	./.	1/1	1/1	0/1	0/1	0/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	0/0	./.	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	./.	1/1	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/0	1/1	1/1	./.	0/0	1/1	0/0	1/1	0/1	1/1	0/1	1/1	1/1	./.	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	./.	./.	./.	./.	./.	1/1	./.	./.	1/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	1/1	0/0	1/1
+3	19961777	SNP-3.19960287.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	./.	1/1	0/0	0/1	0/0	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	1/1	0/0
+3	19962829	SNP-3.19961339.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|aGc/aTc|p.Ser427Ile/c.1280G>T|484|LOC_Os03g35990|protein_coding|CODING|LOC_Os03g35990.1|8|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	./.	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	./.	0/1	0/1	0/0	0/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	./.	0/1	./.	./.	0/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/1	0/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/1	0/0	1/1	./.	1/1	1/1	0/0	1/1	0/0	./.	1/1	0/0	0/1	0/0	0/1	0/0	./.	1/1	0/0	1/1	./.	0/0	0/0	1/1	0/1	0/0	0/0	0/1	./.	0/0	0/0	0/1	0/0	1/1	1/1	1/1	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	./.	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	./.	0/0	1/1	0/0
+3	19969198	SNP-3.19967708.	A	G	.	.	PR;EFF=intron_variant(MODIFIER|||c.3369-55T>C|1184|LOC_Os03g36000|protein_coding|CODING|LOC_Os03g36000.1|4|1)	GT	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	./.	./.	0/1	./.	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	./.	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	./.	0/1	./.	0/0	0/1	./.	1/1	0/0	./.	0/0	./.	1/1	./.	0/1	0/0	0/0	0/0	0/1	0/0	1/1	./.	1/1	1/1	1/1	1/1	./.	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	1/1	./.	./.	./.	./.	0/0	./.	0/0	1/1	./.	0/0	./.	0/0	0/0	./.	0/0	0/1	1/1	0/0	0/0	./.	1/1	./.	0/0	0/1	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/1	./.	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	./.	0/0	1/1
+3	19969228	SNP-3.19967738.	C	A	.	.	PR;EFF=intron_variant(MODIFIER|||c.3369-85G>T|1184|LOC_Os03g36000|protein_coding|CODING|LOC_Os03g36000.1|4|1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/1	0/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19969947	SNP-3.19968457.	C	A	.	.	PR;EFF=synonymous_variant(LOW||aTt/aTt|p.Ile1047Ile/c.3140G>T|1184|LOC_Os03g36000|protein_coding|CODING|LOC_Os03g36000.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/1	./.	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/1	0/0	0/0	./.	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	./.	0/1	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	./.	1/1	0/0	./.	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/1	1/1	1/1	1/1	0/0	./.	0/0	1/1	1/1	1/1	0/1	0/1	0/0	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19970174	SNP-3.19968684.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|ttA/ttT|p.Leu971Phe/c.2913G>T|1184|LOC_Os03g36000|protein_coding|CODING|LOC_Os03g36000.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19970612	SNP-3.19969122.	A	G	.	.	PR;EFF=synonymous_variant(LOW|SILENT|tcA/tcC|p.Ser825Ser/c.2475T>C|1184|LOC_Os03g36000|protein_coding|CODING|LOC_Os03g36000.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	19971695	SNP-3.19970205.	C	A	.	.	PR;EFF=synonymous_variant(LOW||ctT/ctT|p.Leu464Leu/c.1392G>T|1184|LOC_Os03g36000|protein_coding|CODING|LOC_Os03g36000.1|3|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	0/1	1/1	0/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	0/1	1/1	./.	./.	./.	1/1	1/1	./.	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19973386	SNP-3.19971896.	C	A	.	.	PR;EFF=missense_variant(MODERATE|MISSENSE|tCt/tTt|p.Ser7Phe/c.20G>T|1184|LOC_Os03g36000|protein_coding|CODING|LOC_Os03g36000.1|1|1|WARNING_REF_DOES_NOT_MATCH_GENOME)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/1	1/1	0/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	1/1	0/0	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	0/0	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/1	./.	1/1	./.	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	./.	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0
+3	19974011	SNP-3.19972521.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	0/1	0/0	./.	1/1	1/1	0/0	0/0	0/0	1/1	./.	0/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	0/1	1/1	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/1	0/0	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0	1/1	1/1	0/0	0/1	1/1	1/1	1/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0
+3	19975116	SNP-3.19973626.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	1/1	1/1	./.	1/1	0/0	./.	1/1	0/0	1/1	./.	./.	0/0	0/0	0/0	./.	1/1	./.	1/1	./.	1/1	./.	0/0	./.	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	./.	./.	./.	0/0	./.	./.	./.	0/0	./.	0/0	0/0	./.	1/1	./.	0/0	0/0	1/1	./.	0/0	1/1	1/1	1/1	1/1	./.	./.	0/0	./.	1/1	1/1	./.	0/0	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	1/1	./.	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	1/1	0/0	1/1	./.	./.	./.	0/0	1/1	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	./.	0/0	0/0	0/0	1/1	0/0	./.	./.	1/1	./.	0/0	./.	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	1/1	./.	./.	./.	0/0	1/1	./.	0/0	0/0	1/1	1/1	./.	./.	./.	1/1	1/1	./.	./.	1/1	1/1	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	0/0	0/0	./.	0/0	1/1
+3	19976521	SNP-3.19975031.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	0/0	0/0	0/0	./.	1/1	1/1	0/1	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	./.	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	0/1	1/1	0/1	0/1	0/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/1	1/1	0/0	1/1	0/0	0/0	0/1	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	1/1	0/0	0/0	0/0	0/0	1/1	0/0
+3	19983247	SNP-3.19981757.	C	A	.	.	PR;EFF=synonymous_variant(LOW|SILENT|ctC/ctA|p.Leu643Leu/c.1929C>A|1461|LOC_Os03g36030|protein_coding|CODING|LOC_Os03g36030.1|1|1)	GT	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	./.	./.	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	./.	./.	1/1	0/0	1/1	1/1	0/0	./.	./.	1/1	./.	1/1	0/0	1/1	./.	./.	1/1	1/1	1/1	./.	./.	./.	./.	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/0	0/0	0/0	./.	./.	./.	0/0	./.	0/0	1/1	1/1	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	1/1	1/1	0/0	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/0	0/0	0/0	./.	0/0	1/1	0/0
+3	19989349	SNP-3.19987859.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	./.	1/1	./.	0/0	./.	1/1	1/1	0/1	0/1	./.	0/0	0/1	./.	1/1	./.	0/0	1/1	0/0	0/0	0/1	0/0	1/1	./.	./.	./.	./.	./.	./.	0/0	0/0	./.	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	1/1	1/1	1/1	./.	1/1	0/0	1/1	0/1	1/1	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	0/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	1/1	1/1	1/1	1/1	./.	0/0	0/1	0/0	0/1	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	./.	1/1	1/1	0/0	0/1	./.	0/1	0/0	0/0	./.	0/1	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/1	0/0	0/0	0/0	0/0	0/1	0/0
+3	19989539	SNP-3.19988049.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	1/1	./.	1/1	0/0	./.	./.	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	0/0	1/1	1/1	1/1	1/1	./.	1/1	./.	1/1	1/1	./.	1/1	1/1	0/0	./.	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	./.	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	1/1	./.	./.	0/0	1/1	1/1	./.	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	./.	1/1	0/0	./.	./.	0/0	0/0	./.	0/0	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	1/1	0/0	./.	0/0	0/0	1/1	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	0/0	0/0	./.	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	./.	1/1	./.	0/0	0/0	./.	1/1	1/1	1/1	1/1	1/1	./.	1/1	0/0	./.	0/0	./.	0/0	./.	./.	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	./.	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	./.	0/0	./.	0/0	./.	./.	0/0	0/0	1/1	0/0
+3	19991345	SNP-3.19989855.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	0/0	1/1	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/1	1/1	1/1	1/1	0/0	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/1	./.	0/0	0/0	./.	0/0	./.	./.	0/0	0/0	0/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/1	1/1	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	1/1	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/1	0/0	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	1/1	1/1	1/1	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	./.	1/1	1/1	1/1	0/1	1/1	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	1/1	./.	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	0/0	0/0
+3	19991997	SNP-3.19990507.	A	G	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	./.	./.	1/1	1/1	1/1	0/1	./.	1/1	0/0	1/1	1/1	1/1	0/0	1/1	0/0	1/1	1/1	0/0	1/1	0/0	0/0	1/1	0/0	0/0	1/1	1/1	1/1	1/1	1/1	./.	0/0	0/1	1/1	1/1	./.	0/0	0/0	0/0	0/0	./.	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	0/0	1/1	0/0	./.	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/0	0/0	1/1	1/1	./.	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	./.	0/0	1/1	1/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	1/1	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1
+3	19992016	SNP-3.19990526.	C	A	.	.	PR;EFF=intergenic_region(MODIFIER||||||||||1)	GT	0/0	1/1	0/0	1/1	0/0	0/0	0/0	1/1	1/1	0/1	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/1	1/1	0/0	1/1	1/1	0/1	0/1	0/1	0/1	0/1	0/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	1/1	./.	1/1	1/1	1/1	0/0	1/1	0/0	1/1	0/1	1/1	0/1	0/0	0/0	0/0	0/1	1/1	0/0	1/1	1/1	0/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/0	0/0	./.	0/0	1/1	0/0	0/0	./.	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	0/0	0/0	0/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	1/1	1/1	1/1	0/1	1/1	0/0	1/1	0/0	1/1	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	1/1	0/0	0/0	1/1	1/1	0/0	0/0	0/0	0/0	1/1	0/0
diff -r 000000000000 -r a929ef8dea25 test-data/filelog.txt
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/filelog.txt	Tue Aug 14 07:59:19 2018 -0400
@@ -0,0 +1,101 @@
+beagle.jar (r1399)
+Copyright (C) 2014 Brian L. Browning
+Enter "java -jar beagle.jar" for a summary of command line arguments.
+Start time: 10:43 AM CEST on 20 Jul 2018
+
+Command line: java -Xmx1963m -jar beagle.jar
+  gt=/work/GALAXY/galaxy/database/files/071/dataset_71177.dat
+  phase-its=5
+  impute-its=5
+  out=out
+
+reference samples: 0
+target samples:    257
+  singles: 257
+  duos:    0
+  trios:   0
+
+Window 1 [ 3:15001183-19992016 ]
+target markers:    3094
+
+Starting burn-in iterations
+
+Window=1 Iteration=1
+Time for building model:         5 seconds
+Time for sampling (singles):     5 seconds
+Singles model
+mean edges/level: 21     max edges/level: 39
+mean edges/node:  1.655  mean count/edge: 24
+
+Window=1 Iteration=2
+Time for building model:         4 seconds
+Time for sampling (singles):     5 seconds
+Singles model
+mean edges/level: 23     max edges/level: 46
+mean edges/node:  1.513  mean count/edge: 22
+
+Window=1 Iteration=3
+Time for building model:         7 seconds
+Time for sampling (singles):     6 seconds
+Singles model
+mean edges/level: 25     max edges/level: 52
+mean edges/node:  1.425  mean count/edge: 21
+
+Window=1 Iteration=4
+Time for building model:         4 seconds
+Time for sampling (singles):     7 seconds
+Singles model
+mean edges/level: 27     max edges/level: 51
+mean edges/node:  1.393  mean count/edge: 19
+
+Window=1 Iteration=5
+Time for building model:         4 seconds
+Time for sampling (singles):     5 seconds
+Singles model
+mean edges/level: 28     max edges/level: 57
+mean edges/node:  1.374  mean count/edge: 18
+
+Starting phasing iterations
+
+Window=1 Iteration=6
+Time for building model:         5 seconds
+Time for sampling (singles):     6 seconds
+Singles model
+mean edges/level: 29     max edges/level: 54
+mean edges/node:  1.349  mean count/edge: 18
+
+Window=1 Iteration=7
+Time for building model:         4 seconds
+Time for sampling (singles):     7 seconds
+Singles model
+mean edges/level: 29     max edges/level: 56
+mean edges/node:  1.362  mean count/edge: 18
+
+Window=1 Iteration=8
+Time for building model:         5 seconds
+Time for sampling (singles):     7 seconds
+Singles model
+mean edges/level: 29     max edges/level: 51
+mean edges/node:  1.346  mean count/edge: 18
+
+Window=1 Iteration=9
+Time for building model:         5 seconds
+Time for sampling (singles):     7 seconds
+Singles model
+mean edges/level: 29     max edges/level: 57
+mean edges/node:  1.352  mean count/edge: 18
+
+Window=1 Iteration=10
+Time for building model:         3 seconds
+Time for sampling (singles):     6 seconds
+Singles model
+mean edges/level: 30     max edges/level: 56
+mean edges/node:  1.340  mean count/edge: 17
+
+Number of markers:             3094
+Total time for building model: 46 seconds
+Total time for sampling:       1 minute 2 seconds
+Total run time:                1 minute 53 seconds
+
+End time: 10:45 AM CEST on 20 Jul 2018
+beagle.jar (r1399) finished
diff -r 000000000000 -r a929ef8dea25 test-data/output.vcf
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/output.vcf	Tue Aug 14 07:59:19 2018 -0400
@@ -0,0 +1,3104 @@
+##fileformat=VCFv4.1
+##filedate=20180720
+##source="beagle.jar (r1399)"
+##INFO=<ID=AF,Number=A,Type=Float,Description="Estimated Allele Frequencies">
+##INFO=<ID=AR2,Number=1,Type=Float,Description="Allelic R-Squared: estimated correlation between most probable ALT dose and true ALT dose">
+##INFO=<ID=DR2,Number=1,Type=Float,Description="Dosage R-Squared: estimated correlation between estimated ALT dose [P(RA) + 2*P(AA)] and true ALT dose">
+##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
+##FORMAT=<ID=DS,Number=1,Type=Float,Description="estimated ALT dose [P(RA) + P(AA)]">
+##FORMAT=<ID=GP,Number=G,Type=Float,Description="Estimated Genotype Probability">
+#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	c88dcbba.0	0b7d031b.0	16ef3c90.0	26863647.0	7f32098d.0	608b0d34.0	46aa9c6a.0	d00c1e13.0	8366125c.0	a358fb3f.0	2a5ee06d.0	df3c89f8.0	78f9e9fe.0	04aca4b5.0	04704bb4.0	5cf82125.0	559cd294.0	98ca16ae.0	1865f890.0	66391666.0	824bd841.0	971d8d35.0	1580b445.0	3476f3f1.0	6fe1d5f1.0	727d7321.0	8a1459b3.0	1a210383.0	2aa697f5.0	a7596568.0	41872470.0	d9a92db4.0	66b6164a.0	5a43ae22.0	6ac8c69b.0	3afe78bc.0	bf19b73d.0	d7e9eece.0	82e8b7f7.0	60121701.0	6cf8dce4.0	3051c486.0	59afa5e3.0	68b91064.0	ae03e236.0	ddaead61.0	aa6cd0c1.0	e1d9a122.0	fb625f89.0	cb0723a4.0	98042619.0	aca14ce9.0	bada3969.0	5efeb5b6.0	fe614ecb.0	bea7cbcf.0	1abb6b2c.0	4506b36e.0	addc58a4.0	f5f3d6ea.0	e1838272.0	d2dd5d08.0	4874cc49.0	a6e508e5.0	61544ce0.0	429e439a.0	522427a2.0	b41ea6b3.0	773db8bf.0	ce7eb496.0	2eafa96f.0	533385bb.0	1f8b989f.0	44fe4cf1.0	07990ed9.0	f40ea464.0	c7913661.0	c54cc672.0	66c5c186.0	c111198a.0	5b45a727.0	de954805.0	2552833e.0	c840a160.0	529e807c.0	1fb8be6d.0	a85f295d.0	cb0c4d54.0	c3b20632.0	3f0e6324.0	178d96de.0	225b17eb.0	99d33763.0	d10e2929.0	8f99b9e2.0	f6801eb5.0	e2606999.0	b308ee1b.0	a7e6bc0f.0	84e1a141.0	bcea78dd.0	e1d1c3b0.0	01a58510.0	9c00ac3a.0	71ad2583.0	ea2ae002.0	bc730b70.0	9c62b49e.0	5da42fd9.0	3b7bddf8.0	45388f1b.0	cd33864f.0	28dd8a58.0	1de0e087.0	07fd6392.0	f8c60a5c.0	25cdd8ae.0	23b0b44c.0	484b2a0f.0	82e17a03.0	be2b0b83.0	260c1d61.0	e30161a0.0	115e701d.0	4c13a3a3.0	08beaab3.0	68f6c96b.0	2d661c20.0	fb2aa5d5.0	2ece01ea.0	e048f5ff.0	ee58d650.0	5872a595.0	5975119a.0	e3fc5497.0	a51b2a39.0	d66638c8.0	a5ef5ab7.0	7d71b69f.0	b4b4df33.0	14d89242.0	9bdaf6eb.0	c949dc7c.0	d4dd88ed.0	8fa373e8.0	eaa3a28a.0	8609fb0e.0	a6d8f1fd.0	be814f56.0	abc6960f.0	832b2be7.0	5776533f.0	3d3f5b4e.0	bc700e39.0	946e0202.0	47c2ea40.0	c86d6702.0	b95ce243.0	2e05f839.0	79ec00de.0	f292fe0a.0	a65ecc2d.0	2b962329.0	718e09f3.0	0a5fbba4.0	89d2c5a0.0	61d7b167.0	2bfcbe44.0	90bc17da.0	65329b91.0	e069425a.0	5325e87e.0	7578b606.0	6fb127b9.0	3b8476cc.0	c8fc9010.0	fd96414a.0	7f0e7041.0	a0c41ad0.0	1e5e8456.0	ab4a346a.0	77bec15a.0	2bca2f34.0	9651d67d.0	9a5569b2.0	b961cc90.0	e42dd51d.0	911f856a.0	53e1db9a.0	e5b216b3.0	18484bd4.0	64f24c90.0	9cbb223a.0	f7e1ce6e.0	9e44e293.0	eac19fb8.0	76f56677.0	87621330.0	dc2cf39b.0	17627a92.0	7126c359.0	c20dfc59.0	cbd6b346.0	f30e146b.0	1510e4aa.0	cf44b628.0	bd7aaa87.0	e8f708a5.0	2b4e06fe.0	3eb8fab5.0	aeed4684.0	328163e1.0	c7aeb39f.0	3e58f34c.0	cc0ef8cf.0	30646147.0	192e24ab.0	5ef1be74.0	71d5fcf4.0	714ac141.0	0f6a67da.0	a796716d.0	a8319fc6.0	93387d96.0	5384be83.0	8fafd383.0	cff871e8.0	2a7724c1.0	773e969e.0	743f41c1.0	1a946dc6.0	9ac72c9e.0	5505a767.0	8cd35626.0	fdd98970.0	86556239.0	44aeff79.0	c7d2513e.0	2a9d8d47.0	39dd7feb.0	c0936cf1.0	5aa7968d.0	73c4fdfb.0	5ae0bd70.0	122a975b.0	2b81cf74.0	9b2223bb.0	bf18cbae.0	16463092.0	7a723d9e.0	c8a73fe7.0	5b144b9c.0	3aa51818.0	4f643bf5.0	3fb62843.0	c0d6eca3.0	43f72773.0
+3	15001183	SNP-3.14999829.	C	A	.	PASS	AR2=1;DR2=1;AF=0.202	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15001469	SNP-3.15000115.	A	G	.	PASS	AR2=1;DR2=1;AF=0.41	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.995:0.005,0.995,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	15002088	SNP-3.15000734.	A	G	.	PASS	AR2=0.993;DR2=0.993;AF=0.39	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.922,0.077,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.292:0.729,0.25,0.021	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.985:0,0.014,0.986	1|1:1.977:0,0.023,0.977	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.922,0.077,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.922,0.077,0.002	1|1:2:0,0,1	0|0:0.08:0.922,0.077,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.08:0.922,0.077,0.002	0|0:0:1,0,0	0|0:0.08:0.922,0.077,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.983:0,0.016,0.984	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.032:0.008,0.952,0.04	0|0:0:1,0,0	0|0:0.08:0.922,0.077,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.032:0.008,0.952,0.04	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.08:0.922,0.077,0.002	0|0:0:1,0,0	0|0:0.08:0.922,0.077,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.08:0.922,0.077,0.002	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.08:0.922,0.077,0.002	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.08:0.922,0.077,0.002	0|0:0.08:0.922,0.077,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.08:0.922,0.077,0.002	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	15002962	SNP-3.15001608.	C	A	.	PASS	AR2=1;DR2=1;AF=0.389	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15006811	SNP-3.15005457.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.369	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.938:0.001,0.06,0.939	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.938:0.001,0.06,0.939	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.848:0.006,0.14,0.854	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.938:0.001,0.06,0.939	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.938:0.001,0.06,0.939	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15008914	SNP-3.15007560.	C	A	.	PASS	AR2=0.988;DR2=0.991;AF=0.421	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.932,0.066,0.001	0|0:0.31:0.714,0.261,0.025	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.159:0.847,0.146,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.31:0.714,0.261,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.309:0.716,0.26,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.308:0.716,0.259,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.304:0.72,0.257,0.024	0|1:0.335:0.694,0.277,0.029	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.309:0.716,0.26,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15009272	SNP-3.15007918.	A	G	.	PASS	AR2=0.987;DR2=0.989;AF=0.36	GT:DS:GP	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.248:0.767,0.218,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.194:0.815,0.177,0.008	0|1:1:0,1,0	0|0:0.25:0.766,0.218,0.016	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.243:0.772,0.214,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.25:0.766,0.218,0.016	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.146:0.86,0.134,0.006	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.791:0.007,0.194,0.799	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.791:0.007,0.194,0.799	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.791:0.007,0.194,0.799	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0.245:0.77,0.214,0.015	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.909:0.002,0.087,0.911	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.171:0.837,0.154,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1
+3	15009454	SNP-3.15008100.	A	G	.	PASS	AR2=1;DR2=1;AF=0.366	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.982:0,0.017,0.982	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.993:0.007,0.993,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.978:0,0.021,0.979	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0,0.021,0.979	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	15010303	SNP-3.15008949.	A	G	.	PASS	AR2=0.99;DR2=0.99;AF=0.485	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:1.015:0.243,0.5,0.258	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1.015:0.243,0.5,0.258	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1.015:0.243,0.5,0.258	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:1.028:0.236,0.499,0.264	1|1:2:0,0,1
+3	15012222	SNP-3.15010868.	A	G	.	PASS	AR2=0.997;DR2=0.998;AF=0.279	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.528:0.002,0.468,0.53	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.944,0.055,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.985:0,0.014,0.986	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.96:0,0.04,0.96	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15013793	SNP-3.15012439.	C	A	.	PASS	AR2=0.988;DR2=0.991;AF=0.32	GT:DS:GP	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:1.818:0.008,0.165,0.826	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.034:0.966,0.033,0	1|1:2:0,0,1	0|1:0.548:0.463,0.527,0.01	0|0:0.038:0.963,0.037,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0.037:0.964,0.036,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.052:0.949,0.05,0.001	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.942,0.057,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.449:0.551,0.449,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.03:0.97,0.03,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.818:0.01,0.163,0.827	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.645:0.021,0.313,0.666	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.804:0.011,0.174,0.815	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.022:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.036:0.965,0.035,0	0|0:0.052:0.949,0.05,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.053:0.947,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.954,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.943,0.056,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15016928	SNP-3.15015574.	C	A	.	PASS	AR2=1;DR2=1;AF=0.321	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15016994	SNP-3.15015640.	A	G	.	PASS	AR2=1;DR2=1;AF=0.268	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15017069	SNP-3.15015715.	A	G	.	PASS	AR2=1;DR2=1;AF=0.315	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15017825	SNP-3.15016471.	A	G	.	PASS	AR2=1;DR2=1;AF=0.321	GT:DS:GP	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.004:0.005,0.985,0.009	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15021297	SNP-3.15019943.	A	G	.	PASS	AR2=0.993;DR2=0.993;AF=0.315	GT:DS:GP	1|1:1.951:0.001,0.047,0.952	0|0:0:1,0,0	0|0:0.037:0.964,0.036,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.959,0.041,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.94:0.001,0.058,0.941	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.946:0.001,0.053,0.946	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.946:0.001,0.053,0.946	1|1:2:0,0,1	1|1:1.94:0.001,0.058,0.941	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.946:0.001,0.053,0.946	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.94:0.001,0.058,0.941	1|1:1.94:0.001,0.058,0.941	1|1:2:0,0,1	1|1:1.94:0.001,0.058,0.941	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.941:0.001,0.057,0.942	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0.028:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	1|1:1.94:0.001,0.058,0.941	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.034:0.967,0.033,0	1|1:2:0,0,1	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.06:0.941,0.058,0.001	0|1:1:0,1,0	1|1:1.946:0.001,0.053,0.946	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.951:0.001,0.047,0.952	0|0:0.034:0.967,0.033,0	0|0:0.033:0.968,0.032,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.94:0.001,0.058,0.941	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.964,0.036,0	0|0:0.016:0.984,0.016,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.013:0.987,0.013,0	0|0:0.038:0.962,0.037,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0.034:0.966,0.034,0	1|1:1.94:0.001,0.058,0.941	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	1|1:2:0,0,1	0|0:0.033:0.967,0.033,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.94:0.001,0.058,0.941	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15021415	SNP-3.15020061.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.38	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.027:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.83:0,0.17,0.83	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.128:0.872,0.127,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.068:0.933,0.066,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	15021478	SNP-3.15020124.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.315	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.103:0.899,0.099,0.002	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.927:0.001,0.071,0.928	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.084:0.918,0.08,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15021637	SNP-3.15020283.	A	G	.	PASS	AR2=1;DR2=1;AF=0.385	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.041:0.959,0.04,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	15022555	SNP-3.15021201.	A	G	.	PASS	AR2=0.984;DR2=0.986;AF=0.339	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.153:0.853,0.141,0.006	0|0:0:1,0,0	0|0:0.154:0.852,0.143,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.997:0.006,0.991,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.176:0.832,0.16,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.089:0.911,0.089,0	0|0:0.161:0.845,0.148,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.177:0.83,0.162,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.178:0.83,0.162,0.008	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.165:0.842,0.152,0.007	0|0:0.016:0.984,0.015,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0.157:0.849,0.145,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.176:0.832,0.16,0.008	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.176:0.832,0.16,0.008	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.176:0.832,0.16,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0.176:0.832,0.16,0.008	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.176:0.832,0.16,0.008	0|0:0:1,0,0	0|0:0.182:0.826,0.166,0.008	0|0:0:1,0,0	0|0:0.176:0.832,0.16,0.008	0|0:0.176:0.832,0.16,0.008	0|0:0:1,0,0	0|0:0.176:0.832,0.16,0.008	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0.176:0.832,0.16,0.008	1|1:2:0,0,1
+3	15022888	SNP-3.15021534.	A	G	.	PASS	AR2=0.995;DR2=0.996;AF=0.302	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.952:0.001,0.047,0.953	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.952:0.001,0.047,0.953	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.949:0.001,0.05,0.949	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.952:0.001,0.047,0.953	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.949:0.001,0.05,0.95	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.943:0.001,0.055,0.944	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.952:0.001,0.047,0.953	1|1:2:0,0,1	0|0:0.222:0.778,0.222,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.934:0.001,0.065,0.935	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.821:0.008,0.164,0.829	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.952:0.001,0.047,0.953	0|0:0:1,0,0	1|1:1.952:0.001,0.047,0.953	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.952:0.001,0.047,0.953	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15023579	SNP-3.15022225.	A	G	.	PASS	AR2=1;DR2=1;AF=0.27	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15025795	SNP-3.15024441.	A	G	.	PASS	AR2=0.993;DR2=0.993;AF=0.34	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:0.974:0.263,0.499,0.238	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.975:0.263,0.499,0.238	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.974:0.263,0.499,0.238	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15029041	SNP-3.15027687.	A	G	.	PASS	AR2=0.985;DR2=0.989;AF=0.213	GT:DS:GP	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.249:0.767,0.217,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.035,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.31:0.697,0.295,0.008	0|0:0:1,0,0	0|0:0.035:0.965,0.034,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.734:0.298,0.67,0.032	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.114:0.888,0.109,0.003	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.105:0.898,0.1,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.124:0.88,0.116,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.032:0.968,0.031,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.33:0.681,0.308,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.332:0.683,0.302,0.015	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	15029887	SNP-3.15028533.	A	G	.	PASS	AR2=0.958;DR2=0.97;AF=0.247	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.608:0.038,0.315,0.647	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.609:0.038,0.315,0.647	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.608:0.038,0.315,0.647	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.517:0.056,0.372,0.572	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.622:0.036,0.306,0.658	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.606:0.039,0.316,0.645	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.609:0.038,0.315,0.647	1|1:1.608:0.039,0.315,0.646	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.529:0.054,0.364,0.582	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.612:0.038,0.313,0.649	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.589:0.042,0.326,0.632	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.609:0.038,0.315,0.647	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.609:0.038,0.315,0.647	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.546:0.051,0.353,0.596	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.589:0.042,0.326,0.632	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.605:0.039,0.317,0.644	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.529:0.056,0.359,0.585	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15030098	SNP-3.15028744.	A	G	.	PASS	AR2=0.995;DR2=0.997;AF=0.234	GT:DS:GP	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.897:0.003,0.097,0.9	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.481:0.068,0.383,0.549	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.944:0.001,0.055,0.945	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15031273	SNP-3.15029919.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.323	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.039:0.962,0.038,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.952:0,0.048,0.952	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.028:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15032589	SNP-3.15031235.	A	G	.	PASS	AR2=0.974;DR2=0.978;AF=0.305	GT:DS:GP	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0.054:0.947,0.052,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.964,0.036,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.064:0.937,0.062,0.001	0|0:0:1,0,0	0|0:0.061:0.94,0.059,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.067:0.934,0.065,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.899:0.003,0.096,0.902	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.896:0.003,0.098,0.899	1|1:2:0,0,1	1|1:1.894:0.003,0.1,0.897	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.873:0.004,0.119,0.877	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	1|1:1.877:0.004,0.116,0.88	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.843:0.006,0.145,0.849	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.886:0.003,0.107,0.889	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.897:0.003,0.098,0.899	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.935,0.064,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.961,0.039,0.001	1|0:1.326:0.032,0.61,0.358	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.446:0.089,0.377,0.535	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.897:0.003,0.098,0.899	0|0:0:1,0,0	1|1:1.892:0.003,0.102,0.895	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.027:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.061:0.94,0.059,0.001	0|0:0:1,0,0	0|0:0.436:0.599,0.366,0.035	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.907:0.002,0.088,0.909	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.654:0.029,0.287,0.683	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.216:0.799,0.186,0.015	0|0:0.073:0.929,0.07,0.001	1|1:1.811:0.03,0.13,0.84	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.071:0.93,0.068,0.001	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.808:0.009,0.174,0.817	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.894:0.003,0.101,0.897	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.897:0.003,0.098,0.899	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.942,0.057,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.897:0.003,0.098,0.899	1|1:1.897:0.003,0.098,0.899	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.896:0.003,0.098,0.899	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.088:0.913,0.086,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.948,0.051,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	1|1:2:0,0,1
+3	15032652	SNP-3.15031298.	A	G	.	PASS	AR2=0.993;DR2=0.995;AF=0.246	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.57:0.024,0.383,0.594	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.598:0.029,0.344,0.627	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.896:0.003,0.098,0.899	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.113:0.892,0.104,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15033259	SNP-3.15031905.	A	G	.	PASS	AR2=0.995;DR2=0.996;AF=0.347	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.119:0.17,0.541,0.289	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	1|1:1.993:0,0.006,0.993	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.955:0,0.044,0.956	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	1|1:1.976:0,0.023,0.976	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.797:0.007,0.189,0.804	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.713:0.008,0.271,0.721	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.982:0,0.018,0.982	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15041164	SNP-3.15039810.	A	G	.	PASS	AR2=0.99;DR2=0.992;AF=0.205	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.173:0.845,0.137,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.86:0.002,0.135,0.863	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.142:0.859,0.14,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0.073:0.928,0.071,0.001	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.532:0.471,0.527,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.15:0.852,0.145,0.002	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.97,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.026,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.17:0.832,0.165,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.06:0.942,0.056,0.002	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15045891	SNP-3.15044537.	A	G	.	PASS	AR2=0.982;DR2=0.986;AF=0.354	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0.131:0.873,0.122,0.004	0|0:0.002:0.998,0.002,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.145:0.86,0.135,0.005	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.123:0.881,0.115,0.004	0|1:1:0,1,0	0|0:0.133:0.871,0.125,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.122:0.882,0.115,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.13:0.875,0.121,0.004	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.074:0.927,0.073,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.119:0.884,0.112,0.004	1|0:1.131:0.001,0.868,0.132	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:0.53:0.484,0.502,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.354:0.664,0.318,0.018	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0.149:0.857,0.137,0.006	1|0:1:0,1,0	0|0:0.189:0.823,0.166,0.012	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.044:0.957,0.043,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.036:0.965,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.11:0.893,0.104,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.107:0.896,0.101,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.149:0.857,0.137,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.104:0.899,0.098,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.586:0.46,0.493,0.046	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.093:0.909,0.089,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.125:0.877,0.122,0.002	1|1:2:0,0,1
+3	15048277	SNP-3.15046923.	C	A	.	PASS	AR2=0.988;DR2=0.991;AF=0.316	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.481:0.529,0.46,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.333:0.706,0.256,0.039	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.159:0.844,0.152,0.004	0|1:0.613:0.413,0.561,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.419:0.646,0.289,0.065	0|0:0:1,0,0	0|0:0.037:0.965,0.034,0.001	0|0:0.025:0.976,0.024,0.001	0|0:0.205:0.796,0.203,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.086:0,0.914,0.086	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.194:0.813,0.18,0.007	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.024:0.977,0.022,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.079:0.923,0.074,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15048568	SNP-3.15047214.	A	G	.	PASS	AR2=0.991;DR2=0.993;AF=0.364	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.875:0.004,0.117,0.879	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.626:0.505,0.363,0.132	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.071:0.93,0.069,0.001	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.132:0.872,0.125,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.075:0.926,0.073,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.932:0,0.067,0.932	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.86:0.005,0.13,0.865	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.897:0.002,0.098,0.9	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.87:0.005,0.121,0.875	1|1:2:0,0,1	1|1:1.913:0.002,0.083,0.915	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.925:0.002,0.072,0.927	1|1:2:0,0,1	0|0:0.071:0.932,0.065,0.003	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	15063744	SNP-3.15062390.	A	G	.	PASS	AR2=1;DR2=1;AF=0.27	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15063983	SNP-3.15062629.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.361	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.012:0.988,0.011,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.604:0.005,0.385,0.609	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.999:0.001,0.999,0	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.989:0,0.011,0.989	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.979:0,0.021,0.979	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.971:0.001,0.028,0.972	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	1|1:2:0,0,1
+3	15064067	SNP-3.15062713.	A	G	.	PASS	AR2=0.988;DR2=0.99;AF=0.435	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.876:0.005,0.114,0.881	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.915:0.001,0.082,0.916	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.445:0.605,0.344,0.05	0|0:0.081:0.921,0.077,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.108:0.895,0.102,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.107:0.896,0.101,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.98,0.019,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.192:0.002,0.804,0.194	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.946:0,0.054,0.946	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.923:0.002,0.072,0.925	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.918:0.003,0.076,0.921	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.932:0.002,0.064,0.934	1|1:2:0,0,1	1|1:1.922:0.003,0.072,0.925	1|1:2:0,0,1	1|1:1.886:0.007,0.099,0.893	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.926:0.002,0.071,0.928	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.933,0.066,0.001	0|0:0.073:0.928,0.071,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.858:0.004,0.134,0.862	0|0:0.085:0.917,0.081,0.002	1|1:2:0,0,1	0|1:0.484:0.543,0.431,0.026	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.891:0.004,0.101,0.895	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.892:0.002,0.104,0.894	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.916:0.003,0.078,0.919	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	15064405	SNP-3.15063051.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.412	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.904:0.002,0.093,0.906	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.862:0.006,0.126,0.868	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	15065635	SNP-3.15064281.	A	G	.	PASS	AR2=0.984;DR2=0.987;AF=0.288	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.944,0.056,0	1|0:1:0,1,0	0|0:0.09:0.913,0.084,0.003	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.721:0.305,0.67,0.025	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.123:0.878,0.12,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0.12:0.881,0.118,0.001	0|0:0.05:0.951,0.049,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.086:0.916,0.082,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.952,0.047,0.001	0|0:0:1,0,0	0|0:0.293:0.726,0.255,0.019	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.872:0.003,0.123,0.874	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.929:0.002,0.068,0.931	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.963,0.037,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.942:0.001,0.056,0.943	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.842:0.01,0.137,0.852	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.711:0.025,0.238,0.737	0|0:0:1,0,0	1|1:1.883:0.003,0.111,0.886	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.817:0.005,0.174,0.822	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.144:0.861,0.135,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.969:0.001,0.029,0.97	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.378:0.644,0.335,0.022	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15065828	SNP-3.15064474.	A	G	.	PASS	AR2=0.987;DR2=0.991;AF=0.272	GT:DS:GP	1|1:1.932:0.002,0.064,0.934	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.93:0.002,0.066,0.932	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.94:0.002,0.056,0.942	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.597:0.038,0.326,0.635	1|1:2:0,0,1	1|0:0.692:0.308,0.692,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.597:0.038,0.326,0.635	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.597:0.038,0.326,0.635	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.587:0.041,0.331,0.628	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.971:0,0.029,0.971	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15067575	SNP-3.15066221.	A	G	.	PASS	AR2=0.995;DR2=0.996;AF=0.289	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.413:0.004,0.579,0.417	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:0.992:0.243,0.522,0.235	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0
+3	15067632	SNP-3.15066278.	A	G	.	PASS	AR2=1;DR2=1;AF=0.288	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0
+3	15067704	SNP-3.15066350.	A	G	.	PASS	AR2=0.981;DR2=0.983;AF=0.327	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.967:0,0.033,0.967	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:1.062:0.218,0.501,0.28	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.936:0.278,0.508,0.214	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.96:0.124,0.792,0.084	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.359:0.084,0.473,0.443	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.172:0.828,0.172,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.042:0.091,0.776,0.133	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.948:0.002,0.048,0.95	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.796:0.017,0.169,0.813	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1.061:0.221,0.498,0.282	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1.072:0.216,0.496,0.288	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.716:0.028,0.228,0.744	0|0:0:1,0,0	0|0:0:1,0,0
+3	15067776	SNP-3.15066422.	A	G	.	PASS	AR2=0.947;DR2=0.955;AF=0.408	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.173:0.835,0.158,0.008	0|0:0.02:0.98,0.02,0	1|1:1.71:0.039,0.211,0.749	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.081:0.919,0.081,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	1|0:0.476:0.527,0.471,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.138:0.866,0.13,0.004	0|1:0.866:0.322,0.491,0.188	0|1:0.879:0.183,0.755,0.062	1|1:1.72:0.026,0.228,0.746	1|1:2:0,0,1	0|0:0.188:0.822,0.168,0.01	1|0:0.902:0.163,0.773,0.064	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.136:0.868,0.127,0.004	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.003:0.238,0.521,0.241	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.593:0.477,0.453,0.07	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.172:0.835,0.157,0.007	1|1:1.822:0,0.178,0.822	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.97:0.239,0.553,0.208	0|0:0:1,0,0	1|0:0.903:0.16,0.776,0.064	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.027:0.974,0.025,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.132:0.873,0.123,0.005	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.145:0.862,0.132,0.006	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.903:0.16,0.776,0.063	1|1:2:0,0,1	0|0:0.143:0.862,0.133,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.903:0.16,0.776,0.064	0|0:0.445:0.584,0.388,0.029	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.023:0.977,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.746:0.285,0.683,0.031	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:0.908:0.158,0.775,0.066	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.021:0.98,0.02,0	1|1:2:0,0,1	0|0:0.152:0.855,0.138,0.007	1|1:2:0,0,1	0|0:0.489:0.514,0.483,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	1|1:2:0,0,1	0|0:0.018:0.982,0.018,0	0|0:0.212:0.8,0.187,0.012	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.902:0.165,0.767,0.068	0|0:0.252:0.752,0.244,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.021:0.98,0.02,0	0|0:0.181:0.827,0.165,0.008	0|0:0.016:0.984,0.016,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.147:0.859,0.135,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.164:0.843,0.151,0.007	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.906:0.158,0.779,0.064	1|0:0.903:0.16,0.776,0.064	1|0:0.903:0.16,0.776,0.064	1|1:2:0,0,1	0|0:0.835:0.34,0.484,0.176	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.908:0.158,0.775,0.067	1|0:0.843:0.336,0.485,0.179	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.901:0.163,0.772,0.064	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.145:0.861,0.133,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.18:0.829,0.162,0.009	1|1:2:0,0,1	0|0:0.206:0.806,0.183,0.011	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15067863	SNP-3.15066509.	C	A	.	PASS	AR2=1;DR2=1;AF=0.243	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15067938	SNP-3.15066584.	A	G	.	PASS	AR2=0.983;DR2=0.984;AF=0.248	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.617:0.003,0.377,0.62	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.981:0.204,0.611,0.185	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.98:0.205,0.611,0.184	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:0.953:0.154,0.739,0.107	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.754:0.381,0.484,0.135	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:0.992:0.225,0.558,0.217	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.963:0.216,0.604,0.18	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0
+3	15067978	SNP-3.15066624.	A	G	.	PASS	AR2=0.983;DR2=0.984;AF=0.262	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1.14:0.185,0.489,0.326	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.14:0.185,0.489,0.326	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1.136:0.085,0.694,0.221	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.141:0.185,0.489,0.326	1|0:1.139:0.186,0.489,0.325	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.139:0.186,0.489,0.325
+3	15068177	SNP-3.15066823.	A	G	.	PASS	AR2=0.992;DR2=0.995;AF=0.251	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.131:0.88,0.108,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.099:0.901,0.099,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.648:0.458,0.436,0.106	0|0:0:1,0,0	0|0:0.055:0.945,0.054,0.001	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.963,0.037,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.933,0.064,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0
+3	15068200	SNP-3.15066846.	A	G	.	PASS	AR2=0.997;DR2=0.997;AF=0.265	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.998:0.015,0.972,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.861:0.007,0.125,0.868	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.895:0.003,0.1,0.897	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.871:0.004,0.122,0.874	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.936:0.001,0.061,0.937	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.9:0.002,0.095,0.902	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15068596	SNP-3.15067242.	A	G	.	PASS	AR2=1;DR2=1;AF=0.377	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	15069419	SNP-3.15068065.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.251	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.883:0,0.117,0.883	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15069431	SNP-3.15068077.	A	G	.	PASS	AR2=0.956;DR2=0.965;AF=0.205	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.686:0.025,0.263,0.712	0|0:0:1,0,0	1|1:1.678:0.027,0.269,0.705	0|1:1.623:0.033,0.311,0.656	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.685:0.025,0.264,0.711	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.522:0,0.478,0.522	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.126:0.878,0.117,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0.117:0.886,0.11,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0.146:0.859,0.135,0.005	0|0:0.146:0.859,0.135,0.005	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0.153:0.853,0.141,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.959,0.041,0	0|0:0.181:0.827,0.165,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.153:0.853,0.141,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.124:0.881,0.115,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.329:0.709,0.252,0.038	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.259:0.741,0.259,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.265:0.75,0.235,0.015	0|0:0:1,0,0	0|0:0.195:0.818,0.168,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.117:0.886,0.11,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.743:0.017,0.222,0.76	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.167:0.84,0.153,0.007	1|1:2:0,0,1	1|1:1.689:0.025,0.261,0.714	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.716:0.019,0.245,0.735	0|0:0.008:0.992,0.008,0	1|1:1.715:0.02,0.246,0.735	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.135:0.869,0.126,0.005	0|0:0:1,0,0	0|0:0.078:0.924,0.075,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.151:0.855,0.139,0.006	0|0:0.044:0.956,0.044,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.69:0.025,0.26,0.715	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.743:0.017,0.222,0.761	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.124:0.881,0.115,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15069683	SNP-3.15068329.	A	G	.	PASS	AR2=0.997;DR2=0.998;AF=0.304	GT:DS:GP	1|1:1.967:0,0.033,0.967	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.739:0,0.261,0.739	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.983:0,0.017,0.983	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.766:0,0.233,0.767	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15069856	SNP-3.15068502.	A	G	.	PASS	AR2=1;DR2=1;AF=0.263	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15069889	SNP-3.15068535.	A	G	.	PASS	AR2=0.996;DR2=0.997;AF=0.37	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.012:0.242,0.504,0.254	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.139:0.864,0.133,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.055:0.946,0.054,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.045:0.001,0.953,0.046	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.063:0.938,0.06,0.002	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15070071	SNP-3.15068717.	A	G	.	PASS	AR2=0.966;DR2=0.975;AF=0.284	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.027:0.005,0.962,0.033	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0.751:0.407,0.434,0.159	0|0:0:1,0,0	0|0:0.213:0.806,0.175,0.019	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.992:0,0.007,0.992	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.414:0.616,0.354,0.03	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.39:0.651,0.309,0.04	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.999:0.001,0.999,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.39:0.651,0.309,0.04	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.234:0.772,0.222,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.414:0.616,0.354,0.03	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.216:0.801,0.181,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.229:0.778,0.214,0.007	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.39:0.651,0.309,0.04	0|0:0.39:0.651,0.309,0.04	0|0:0.39:0.651,0.309,0.04	0|0:0:1,0,0	0|0:0.39:0.651,0.309,0.04	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.414:0.616,0.354,0.03	0|0:0.39:0.651,0.309,0.04	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.385:0.654,0.306,0.04	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15070205	SNP-3.15068851.	A	G	.	PASS	AR2=0.979;DR2=0.988;AF=0.268	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.355:0.104,0.437,0.459	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.355:0.104,0.437,0.459	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.355:0.104,0.437,0.459	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.241:0.155,0.45,0.396	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.355:0.104,0.437,0.459	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15070559	SNP-3.15069205.	A	G	.	PASS	AR2=0.902;DR2=0.921;AF=0.244	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.048:0.953,0.045,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.76:0.385,0.469,0.146	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:0.709:0.416,0.459,0.125	0|1:0.773:0.377,0.473,0.15	0|0:0:1,0,0	1|0:0.753:0.39,0.468,0.143	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.969:0,0.031,0.969	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.823:0.348,0.482,0.171	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.781:0.372,0.475,0.153	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.57:0.512,0.406,0.082	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.412:0.622,0.345,0.034	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0.162:0.838,0.162,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.758:0.387,0.468,0.145	0|1:0.75:0.389,0.471,0.14	0|0:0.758:0.387,0.468,0.145	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.772:0.377,0.473,0.149	1|0:1:0,1,0	0|1:1:0,1,0	0|1:0.733:0.4,0.466,0.133	0|0:0:1,0,0	0|0:0.762:0.381,0.476,0.143	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0.709:0.416,0.46,0.125	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.511:0.555,0.379,0.066	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.698:0.426,0.451,0.124	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.715:0.416,0.453,0.131	0|1:1:0,1,0	0|0:0:1,0,0	0|1:0.728:0.406,0.461,0.134	0|0:0.73:0.405,0.46,0.135	0|1:1:0,1,0	0|0:0.715:0.416,0.453,0.131	0|0:0:1,0,0	0|1:0.717:0.414,0.454,0.131	0|0:0.456:0.598,0.348,0.054	0|1:0.715:0.416,0.453,0.131	0|0:0:1,0,0	0|0:0.491:0.568,0.372,0.059	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.455:0.599,0.347,0.054	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.455:0.599,0.347,0.054	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	15070657	SNP-3.15069303.	A	G	.	PASS	AR2=0.966;DR2=0.974;AF=0.266	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.384:0.125,0.367,0.508	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.275:0.097,0.532,0.371	0|0:0:1,0,0	1|0:0.789:0.211,0.789,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|1:0.94:0.281,0.498,0.221	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:0.957:0.272,0.499,0.229	0|0:0:1,0,0	0|0:0.921:0.291,0.496,0.212	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.991:0.196,0.618,0.186	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.698:0.449,0.405,0.146	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.586:0.511,0.392,0.097	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:0.957:0.272,0.499,0.229	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0
+3	15071721	SNP-3.15070367.	A	G	.	PASS	AR2=0.987;DR2=0.989;AF=0.238	GT:DS:GP	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.05:0.952,0.046,0.002	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.277:0.736,0.251,0.013	0|0:0.215:0.793,0.198,0.009	0|0:0.132:0.873,0.122,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.082:0.921,0.076,0.003	0|0:0:1,0,0	0|0:0.12:0.883,0.114,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.342:0.675,0.308,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.249:0.087,0.577,0.336	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|0:0.995:0.026,0.953,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.731:0.02,0.229,0.751	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.181:0.827,0.164,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15071916	SNP-3.15070562.	A	G	.	PASS	AR2=0.993;DR2=0.994;AF=0.389	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.269:0.735,0.262,0.004	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.806:0.354,0.487,0.159	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0.175:0.832,0.161,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.918:0.293,0.496,0.211	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15072360	SNP-3.15071006.	A	G	.	PASS	AR2=0.994;DR2=0.994;AF=0.237	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.023:0.239,0.5,0.262	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1.003:0.249,0.499,0.252	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0
+3	15072470	SNP-3.15071116.	A	G	.	PASS	AR2=0.984;DR2=0.988;AF=0.235	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.594:0,0.406,0.594	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.128:0.878,0.116,0.006	1|1:2:0,0,1	1|1:1.952:0,0.047,0.952	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.765:0.004,0.226,0.769	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.182:0.829,0.16,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.952:0.002,0.044,0.954	1|0:1.359:0.019,0.602,0.378	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.972:0,0.028,0.972	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.95:0.001,0.048,0.951	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.316:0,0.683,0.316	1|0:0.997:0.095,0.814,0.092	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.953:0,0.046,0.953	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.513:0.552,0.383,0.065	0|0:0:1,0,0	1|1:1.97:0,0.029,0.97	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.953:0.001,0.046,0.954
+3	15072855	SNP-3.15071501.	A	G	.	PASS	AR2=0.994;DR2=0.996;AF=0.286	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.998:0.003,0.997,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.594:0,0.406,0.594	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|0:1.08:0.003,0.915,0.082	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|0:1.4:0,0.599,0.401	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.972:0,0.028,0.972	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.934:0.005,0.055,0.94	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.978:0,0.021,0.978	1|1:1.997:0,0.003,0.997	1|1:1.875:0,0.125,0.875	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15073143	SNP-3.15071789.	A	G	.	PASS	AR2=0.979;DR2=0.984;AF=0.3	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.387:0.051,0.511,0.438	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.944:0.278,0.5,0.222	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.948:0.287,0.478,0.235	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.39:0.048,0.514,0.438	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1.279:0.125,0.471,0.404	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.441:0.027,0.505,0.468	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.451:0.022,0.505,0.473	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.45:0.022,0.505,0.473	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15073653	SNP-3.15072299.	A	G	.	PASS	AR2=0.988;DR2=0.99;AF=0.223	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.481:0.547,0.426,0.028	0|0:0.278:0.735,0.251,0.013	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.703:0.406,0.485,0.109	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.075:0.249,0.427,0.324	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0
+3	15073924	SNP-3.15072570.	A	G	.	PASS	AR2=1;DR2=1;AF=0.348	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15074046	SNP-3.15072692.	A	G	.	PASS	AR2=1;DR2=1;AF=0.373	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.934:0,0.065,0.935	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	15075268	SNP-3.15073914.	A	G	.	PASS	AR2=0.995;DR2=0.996;AF=0.295	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.952:0.001,0.046,0.953	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.381:0.619,0.381,0	1|1:1.92:0.002,0.076,0.922	0|0:0:1,0,0	1|1:1.959:0,0.04,0.959	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.969:0,0.031,0.969	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.955:0,0.044,0.955	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.836:0.005,0.155,0.84	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.947:0.001,0.052,0.948	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.961:0,0.039,0.961	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.941:0.001,0.058,0.941	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.952:0.001,0.046,0.953	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15076823	SNP-3.15075469.	A	G	.	PASS	AR2=0.997;DR2=0.998;AF=0.429	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.848:0.005,0.141,0.853	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.865:0.005,0.126,0.869	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0.005:0.996,0.004,0	1|0:1:0,1,0	0|0:0.005:0.995,0.005,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.907:0,0.093,0.907	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.871:0.004,0.121,0.875	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.911:0.002,0.084,0.914	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0
+3	15092922	SNP-3.15091568.	A	G	.	PASS	AR2=0.979;DR2=0.983;AF=0.194	GT:DS:GP	0|0:0.073:0.929,0.069,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.947,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.281:0.726,0.267,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.343:0.682,0.294,0.024	0|0:0:1,0,0	0|0:0.185:0.823,0.169,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.208:0.803,0.186,0.011	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.051:0.95,0.05,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.925,0.073,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.068:0.933,0.066,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.943,0.056,0.001	0|0:0.062:0.939,0.06,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.058:0.943,0.056,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.053:0.948,0.051,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.087:0.914,0.084,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.887:0.004,0.104,0.891	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.118:0.882,0.118,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.958,0.04,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.956,0.043,0	1|1:2:0,0,1	0|0:0.431:0.573,0.422,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.137:0.868,0.127,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.062:0.939,0.06,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.167:0.839,0.155,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.053:0.948,0.051,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	15093289	SNP-3.15091935.	A	G	.	PASS	AR2=0.993;DR2=0.995;AF=0.352	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.623:0.009,0.358,0.632	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.303:0.725,0.247,0.028	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.798:0.001,0.2,0.799	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.976:0,0.024,0.976	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.263:0.115,0.507,0.378	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	15094063	SNP-3.15092709.	A	G	.	PASS	AR2=0.992;DR2=0.993;AF=0.298	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.945,0.053,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.933,0.066,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.061:0.94,0.059,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.062:0.939,0.061,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.019:0.981,0.019,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.063:0.937,0.063,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.743:0.018,0.222,0.761	0|0:0:1,0,0	1|1:1.963:0,0.036,0.963	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.152:0.849,0.15,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.014:0.986,0.014,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.596:0.001,0.402,0.597	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.951,0.048,0.001	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.967:0,0.032,0.968	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.062:0.939,0.06,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.087:0.914,0.084,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.984:0,0.015,0.984	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.112:0.891,0.105,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.089:0.913,0.085,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15095753	SNP-3.15094399.	A	G	.	PASS	AR2=0.964;DR2=0.973;AF=0.366	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.23:0.771,0.227,0.002	0|0:0.056:0.947,0.05,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0.074:0.926,0.073,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.255:0.762,0.221,0.017	0|0:0:1,0,0	0|1:0.747:0.289,0.675,0.036	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:0.45:0.55,0.45,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.963:0.001,0.036,0.964	1|1:2:0,0,1	1|1:1.97:0,0.029,0.971	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.444:0.556,0.444,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.389:0.649,0.312,0.039	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.136:0.864,0.136,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.405:0.632,0.332,0.036	0|0:0:1,0,0	0|0:0.188:0.812,0.188,0	0|1:1:0,1,0	0|0:0.35:0.69,0.271,0.039	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.102:0.902,0.094,0.004	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.338:0.663,0.336,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.308:0.719,0.255,0.027	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.357:0.666,0.311,0.023	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:0.952:0.24,0.569,0.192	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.01:0.99,0.01,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.314:0.715,0.256,0.029	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.628:0.373,0.625,0.001	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	0|0:0.152:0.852,0.144,0.004	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.973:0,0.027,0.973	0|0:0:1,0,0	0|0:0.083:0.918,0.08,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.209:0.807,0.178,0.016	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.096:0.907,0.091,0.002	0|0:0:1,0,0	0|0:0.304:0.72,0.256,0.024	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.409:0.027,0.538,0.436	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.108:0.895,0.102,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.95,0.049,0.001	0|0:0.112:0.892,0.105,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.983:0,0.017,0.983	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.942,0.056,0.002	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15097742	SNP-3.15096388.	A	G	.	PASS	AR2=0.94;DR2=0.953;AF=0.363	GT:DS:GP	0|0:0:1,0,0	0|0:0.169:0.839,0.154,0.007	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.022:0.979,0.021,0.001	0|0:0:1,0,0	0|0:0.412:0.615,0.359,0.026	0|0:0.077:0.926,0.072,0.003	0|0:0.079:0.924,0.073,0.003	1|1:1.716:0.021,0.242,0.737	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.716:0.021,0.241,0.737	1|0:1:0,1,0	1|1:1.533:0.043,0.381,0.576	0|0:0.064:0.936,0.063,0.001	1|1:1.673:0.028,0.272,0.701	1|1:1.457:0.048,0.447,0.505	1|1:2:0,0,1	1|0:1.267:0.141,0.45,0.408	0|1:1:0,1,0	1|1:1.718:0.02,0.241,0.738	1|1:1.717:0.021,0.241,0.738	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1.076:0.206,0.511,0.283	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.498:0.068,0.366,0.566	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.715:0.02,0.245,0.735	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.837:0.003,0.157,0.84	1|1:1.706:0.022,0.25,0.728	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.674:0.027,0.271,0.702	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.669:0.002,0.326,0.671	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.835:0.009,0.148,0.844	1|1:2:0,0,1	1|1:1.186:0.098,0.619,0.283	0|0:0.004:0.996,0.004,0	0|0:0.055:0.946,0.053,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.069:0.933,0.065,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.989:0,0.011,0.989	0|0:0:1,0,0	0|0:0.085:0.918,0.079,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.948,0.051,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.933,0.065,0.002	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.933,0.065,0.002	0|0:0.082:0.921,0.076,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.01:0.99,0.01,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.708:0.022,0.248,0.73	0|1:1.367:0.09,0.453,0.457	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1.11:0.187,0.517,0.297	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.533:0.044,0.378,0.578	1|1:1.655:0.028,0.29,0.682	1|0:1:0,1,0	1|1:1.717:0.021,0.242,0.737	1|1:1.717:0.021,0.241,0.738	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.766:0.014,0.206,0.78	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.731:0.019,0.232,0.75	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.273:0.14,0.448,0.413	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.988:0,0.011,0.988	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.933,0.065,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.686:0.026,0.262,0.712	1|1:1.725:0.019,0.236,0.745	0|0:0:1,0,0	0|0:0:1,0,0
+3	15098539	SNP-3.15097185.	A	G	.	PASS	AR2=0.961;DR2=0.969;AF=0.355	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.13:0.87,0.13,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.762:0.015,0.209,0.776	0|0:0.005:0.995,0.005,0	1|1:1.882:0.005,0.109,0.887	1|1:1.762:0.015,0.209,0.776	0|1:1:0,1,0	1|1:1.404:0.055,0.485,0.46	0|0:0:1,0,0	1|1:1.873:0.007,0.113,0.88	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.774:0.013,0.2,0.787	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.424:0.048,0.479,0.473	1|1:1.77:0.014,0.203,0.783	1|1:1.7:0.029,0.242,0.729	1|1:1.782:0.011,0.195,0.794	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.901:0.005,0.089,0.906	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	1|1:1.864:0.005,0.126,0.869	1|1:1.794:0.011,0.185,0.805	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.313:0.048,0.592,0.361	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.693:0.003,0.3,0.696	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.8:0.004,0.191,0.805	1|1:1.325:0.069,0.538,0.393	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.298:0.035,0.631,0.333	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.975:0,0.025,0.975	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.895:0.003,0.099,0.898	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.908:0.005,0.082,0.913	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.789:0.011,0.189,0.8	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.765:0.013,0.208,0.778	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.764:0.014,0.207,0.778	1|1:2:0,0,1	1|1:1.765:0.014,0.207,0.779	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.408:0.053,0.485,0.462	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.9:0.005,0.091,0.905	1|0:1.345:0.061,0.533,0.406	1|1:1.704:0.02,0.255,0.724	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.761:0.015,0.21,0.776	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.844:0.007,0.142,0.851	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.939:0.002,0.058,0.941	0|0:0.2:0.8,0.2,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.043:0.957,0.043,0	0|0:0:1,0,0
+3	15104295	SNP-3.15102941.	A	G	.	PASS	AR2=1;DR2=1;AF=0.249	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.934:0,0.066,0.934	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	15105593	SNP-3.15104239.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.31	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.121:0.882,0.115,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.948,0.052,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15105921	SNP-3.15104567.	A	G	.	PASS	AR2=0.995;DR2=0.996;AF=0.412	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.977:0,0.023,0.977	1|1:1.735:0.023,0.219,0.758	1|1:1.974:0,0.025,0.974	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.967:0,0.033,0.967	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	1|1:1.84:0.01,0.14,0.85	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.8:0.01,0.18,0.81	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.939:0,0.06,0.94	1|1:2:0,0,1	1|1:1.953:0.001,0.045,0.954	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.977:0,0.023,0.977	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.93:0,0.07,0.93	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.977:0,0.023,0.977	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.957:0,0.043,0.957	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	15106183	SNP-3.15104829.	C	A	.	PASS	AR2=0.978;DR2=0.983;AF=0.248	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.877:0.013,0.098,0.89	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.97:0.001,0.029,0.97	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.059:0.942,0.058,0.001	1|1:1.846:0.001,0.151,0.847	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.094:0.91,0.087,0.003	0|0:0:1,0,0	0|0:0.231:0.79,0.19,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.033:0.968,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:0.826:0.18,0.815,0.005	0|0:0:1,0,0	1|1:1.667:0.025,0.283,0.692	1|1:1.761:0.015,0.208,0.777	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.907:0.005,0.083,0.912	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.866:0.005,0.124,0.871	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.83:0.015,0.14,0.845	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.946,0.053,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.949,0.051,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.161:0.844,0.151,0.005	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.87:0.005,0.12,0.875	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.304:0.167,0.361,0.472	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.916:0.002,0.079,0.918	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.082:0.92,0.079,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	15108121	SNP-3.15106767.	A	G	.	PASS	AR2=0.995;DR2=0.996;AF=0.42	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:1.955:0,0.045,0.955	0|0:0:1,0,0	1|1:1.968:0,0.032,0.968	1|1:1.94:0,0.06,0.94	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:1.482:0.007,0.505,0.488	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:1.971:0,0.028,0.972	1|1:1.967:0,0.032,0.968	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.963:0,0.036,0.963	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.93:0,0.07,0.93	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.967:0,0.032,0.968	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.961:0.001,0.038,0.961	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.962:0.001,0.037,0.963	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.99:0,0.009,0.99	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.974:0,0.025,0.974	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.966:0,0.033,0.967	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:1.953:0.001,0.045,0.954	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.964:0.001,0.035,0.965	0|0:0:1,0,0	1|1:1.961:0.001,0.038,0.961	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.991:0,0.009,0.991	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.991:0,0.009,0.991	1|1:1.988:0,0.012,0.988	1|1:1.992:0,0.008,0.992	1|1:1.992:0,0.008,0.992	1|1:1.989:0,0.011,0.989	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.969:0,0.03,0.97	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	15108954	SNP-3.15107600.	A	G	.	PASS	AR2=1;DR2=1;AF=0.422	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	15112916	SNP-3.15111562.	C	A	.	PASS	AR2=1;DR2=1;AF=0.274	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15116227	SNP-3.15114873.	C	A	.	PASS	AR2=0.966;DR2=0.973;AF=0.323	GT:DS:GP	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.083:0.92,0.076,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.162:0.844,0.149,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.163:0.844,0.149,0.007	0|0:0.195:0.818,0.169,0.013	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.155:0.852,0.142,0.006	0|0:0:1,0,0	0|0:0.161:0.846,0.148,0.007	0|0:0.248:0.764,0.223,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.343:0.693,0.271,0.036	1|0:1:0,1,0	0|0:0.161:0.847,0.146,0.007	0|0:0.062:0.94,0.058,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.944,0.055,0.001	0|0:0.332:0.695,0.277,0.027	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.35:0.672,0.305,0.023	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|1:0.573:0.502,0.423,0.075	0|0:0.053:0.949,0.05,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.248:0.764,0.223,0.012	0|0:0:1,0,0	0|0:0.184:0.831,0.154,0.015	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.281:0.738,0.242,0.02	1|0:1:0,1,0	0|0:0.156:0.85,0.143,0.006	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.042:0.959,0.041,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.103:0.901,0.096,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.149:0.857,0.137,0.006	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.164:0.843,0.15,0.007	0|0:0.133:0.871,0.125,0.004	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.05:0.95,0.05,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.266:0.751,0.232,0.017	0|0:0:1,0,0	0|0:0.057:0.943,0.057,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.179:0.829,0.163,0.008	0|0:0.164:0.843,0.15,0.007	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.163:0.843,0.15,0.007	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.218:0.789,0.204,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.108:0.896,0.101,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.164:0.843,0.15,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.931,0.068,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.164:0.843,0.15,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15117473	SNP-3.15116119.	A	G	.	PASS	AR2=1;DR2=1;AF=0.379	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	15118197	SNP-3.15116843ga.	C	A	.	PASS	AR2=0.983;DR2=0.988;AF=0.499	GT:DS:GP	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.68:0.027,0.267,0.707	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.322:0.703,0.273,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.697:0.025,0.252,0.722	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.015:0.011,0.962,0.027	0|1:1.027:0.008,0.956,0.035	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.656:0.031,0.282,0.687	0|0:0:1,0,0	1|1:1.987:0,0.012,0.987	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.445:0.601,0.352,0.047	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.612:0.04,0.309,0.651	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.06:0.941,0.058,0.001	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.686:0.028,0.259,0.713	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.702:0.02,0.259,0.721	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.637:0.034,0.294,0.671	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0
+3	15118218	SNP-3.15116864.	C	A	.	PASS	AR2=1;DR2=1;AF=0.268	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15120220	SNP-3.15118866.	A	G	.	PASS	AR2=1;DR2=1;AF=0.304	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15122456	SNP-3.15121102.	C	A	.	PASS	AR2=1;DR2=1;AF=0.21	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15123271	SNP-3.15121917.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.271	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.023:0.977,0.023,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.979,0.021,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.943:0,0.056,0.944	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15123515	SNP-3.15122161.	C	A	.	PASS	AR2=1;DR2=1;AF=0.267	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15124843	SNP-3.15123489.	A	G	.	PASS	AR2=0.996;DR2=0.996;AF=0.223	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.236:0.767,0.23,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.206:0.802,0.19,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.052:0.948,0.052,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.085:0.918,0.08,0.002	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.044:0.957,0.042,0.001	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0
+3	15126492	SNP-3.15125138.	A	G	.	PASS	AR2=0.983;DR2=0.986;AF=0.274	GT:DS:GP	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.48:0.044,0.432,0.524	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.282:0.125,0.468,0.407	1|1:1.703:0.018,0.261,0.721	0|0:0:1,0,0	1|1:1.916:0.003,0.079,0.918	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1.054:0.109,0.727,0.164	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.243:0.132,0.494,0.374	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.837:0.007,0.149,0.844	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.952:0.001,0.047,0.952	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.859:0.005,0.132,0.863	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.879:0.004,0.112,0.884	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.814:0.003,0.18,0.817	1|1:1.943:0.002,0.054,0.944	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.894:0.003,0.1,0.897	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.917:0.002,0.078,0.92	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.939:0.002,0.057,0.941	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1
+3	15131782	SNP-3.15130428.	C	A	.	PASS	AR2=1;DR2=1;AF=0.265	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0.002:0.998,0.002,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.971,0.029,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15134720	SNP-3.15133366.	C	A	.	PASS	AR2=0.992;DR2=0.994;AF=0.473	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.891:0.002,0.104,0.893	0|0:0:1,0,0	1|1:1.91:0.002,0.086,0.912	1|0:1.404:0.026,0.545,0.43	1|1:1.513:0.015,0.456,0.528	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.934:0.002,0.063,0.936	1|1:1.912:0.002,0.084,0.914	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.892:0.004,0.101,0.896	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.923:0.001,0.074,0.924	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.957,0.043,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.025:0.042,0.892,0.067	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.85:0.008,0.134,0.858	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.924:0.001,0.074,0.925	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.936:0.001,0.062,0.937	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15134837	SNP-3.15133483.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.282	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.955,0.044,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.955,0.044,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15135234	SNP-3.15133880.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.289	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.924:0.001,0.074,0.925	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.571:0.429,0.571,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15135562	SNP-3.15134208.	A	G	.	PASS	AR2=0.994;DR2=0.995;AF=0.282	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.829:0.004,0.163,0.833	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.959:0,0.04,0.959	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:1.901:0.003,0.094,0.903	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.611:0.389,0.611,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.047:0.953,0.047,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.888:0.004,0.105,0.891	1|0:1:0,1,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.933:0,0.067,0.933	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.814:0.008,0.17,0.822	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15135826	SNP-3.15134472.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.292	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0.064:0.938,0.06,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.067:0.934,0.065,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.013:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15137113	SNP-3.15135759.	C	A	.	PASS	AR2=1;DR2=1;AF=0.28	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.014:0.986,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15138175	SNP-3.15136821.	A	G	.	PASS	AR2=0.895;DR2=0.922;AF=0.246	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.157:0.851,0.141,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.79:0.376,0.459,0.165	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.696:0.428,0.447,0.125	0|1:0.819:0.331,0.519,0.15	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.09:0.912,0.085,0.002	0|0:0.708:0.4,0.492,0.108	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.647:0.435,0.483,0.082	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.911:0.33,0.43,0.24	0|0:0.09:0.912,0.086,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.192:0.819,0.17,0.011	1|1:1.437:0.061,0.442,0.498	1|1:2:0,0,1	0|0:0.216:0.795,0.194,0.011	0|1:0.883:0.262,0.593,0.145	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.097:0.905,0.093,0.002	1|1:2:0,0,1	0|0:0.47:0.566,0.398,0.036	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.097:0.905,0.092,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.478:0.571,0.38,0.049	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.417:0.6,0.383,0.017	0|0:0.414:0.624,0.337,0.039	0|0:0.538:0.548,0.366,0.086	0|0:0:1,0,0	0|0:0.207:0.805,0.182,0.013	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.06:0.942,0.057,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.578:0.014,0.394,0.592	1|0:0.897:0.298,0.507,0.195	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.386:0.106,0.402,0.492	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.465:0.065,0.405,0.53	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.545:0.51,0.434,0.056	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.932,0.067,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.226:0.786,0.203,0.012	0|1:0.843:0.157,0.842,0	0|1:0.822:0.288,0.602,0.11	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.479:0.532,0.457,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.954:0.046,0.954,0	0|0:0.146:0.857,0.139,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.356:0.655,0.334,0.011	0|0:0:1,0,0	1|1:1.402:0.106,0.386,0.508	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.529:0.488,0.496,0.016	0|0:0:1,0,0	0|0:0.117:0.885,0.113,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.679:0.406,0.509,0.085	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.982:0.28,0.457,0.262	1|1:2:0,0,1	1|0:1.409:0.063,0.465,0.472	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.094:0.907,0.092,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.08:0.922,0.075,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.83:0.345,0.48,0.175	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.966:0,0.034,0.966	0|0:0:1,0,0	0|0:0.048:0.953,0.047,0.001	0|0:0.5:0.522,0.456,0.022	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.984:0,0.016,0.984	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.211:0.805,0.18,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.302:0.128,0.442,0.43	0|0:0:1,0,0	0|0:0:1,0,0
+3	15140186	SNP-3.15138832.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.306	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.129:0.873,0.125,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.081:0.921,0.078,0.002	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.111:0.89,0.109,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.062:0.939,0.06,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.043:0.957,0.043,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.154:0.851,0.145,0.005	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.153:0.857,0.133,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.095:0.906,0.094,0.001	0|0:0.028:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.02:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.132:0.871,0.126,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.956,0.042,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15141993	SNP-3.15140639.	C	A	.	PASS	AR2=1;DR2=1;AF=0.276	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15142981	SNP-3.15141627.	C	A	.	PASS	AR2=1;DR2=1;AF=0.286	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15145671	SNP-3.15144317.	A	G	.	PASS	AR2=1;DR2=1;AF=0.294	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15146229	SNP-3.15144875.	A	G	.	PASS	AR2=0.998;DR2=0.999;AF=0.204	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.795:0.014,0.176,0.809	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.036:0.964,0.036,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15146763	SNP-3.15145409.	C	A	.	PASS	AR2=1;DR2=1;AF=0.27	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.996:0.004,0.996,0	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15146784	SNP-3.15145430.	A	G	.	PASS	AR2=0.995;DR2=0.995;AF=0.245	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.82:0.188,0.804,0.008	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.097:0.904,0.094,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.091:0.91,0.088,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.093:0.908,0.091,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0.063:0.938,0.06,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.094:0.906,0.094,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.054:0.947,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.953:0.001,0.046,0.953	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.936:0.001,0.062,0.937	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.958:0.001,0.04,0.959	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15147681	SNP-3.15146327.	C	A	.	PASS	AR2=1;DR2=1;AF=0.274	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15151367	SNP-3.15150013.	C	A	.	PASS	AR2=0.995;DR2=0.997;AF=0.461	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.761:0.014,0.21,0.776	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.775:0.007,0.211,0.782	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.614:0.045,0.295,0.659	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.963:0,0.036,0.964	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.951:0,0.048,0.951	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	15151714	SNP-3.15150360.	A	G	.	PASS	AR2=0.96;DR2=0.97;AF=0.432	GT:DS:GP	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.102:0.01,0.878,0.112	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.68:0.025,0.27,0.705	1|1:2:0,0,1	1|1:1.724:0.016,0.244,0.74	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1.268:0.088,0.557,0.355	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.88:0.004,0.112,0.884	1|0:1.209:0.161,0.468,0.371	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.874:0.004,0.118,0.878	1|1:1.748:0.015,0.221,0.764	1|1:1.967:0,0.033,0.967	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.925:0.001,0.072,0.926	1|1:1.717:0.056,0.171,0.773	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.271:0.115,0.499,0.386	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.655:0.03,0.285,0.685	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.753:0.017,0.213,0.77	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.446:0.075,0.403,0.522	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.883:0.002,0.112,0.885	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.374:0.092,0.442,0.466	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.874:0.002,0.123,0.875	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.727:0.011,0.252,0.737	1|1:2:0,0,1	1|1:1.806:0.024,0.146,0.83	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.671:0.014,0.302,0.684	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.883:0.003,0.11,0.886	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.771:0.022,0.185,0.793	1|1:1.94:0.001,0.059,0.94	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.563:0.021,0.395,0.584	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.539:0.037,0.387,0.576	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.762:0.02,0.198,0.782	0|0:0:1,0,0	1|1:1.73:0.002,0.267,0.731	1|1:1.582:0.056,0.306,0.638	0|0:0:1,0,0	1|1:1.934:0.001,0.064,0.935
+3	15154622	SNP-3.15153268.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.369	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.968:0,0.031,0.968	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.855:0.003,0.14,0.858	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.97:0,0.03,0.97	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.938:0.001,0.061,0.938	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15155173	SNP-3.15153819.	A	G	.	PASS	AR2=0.984;DR2=0.987;AF=0.406	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.183:0.823,0.172,0.006	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.304:0.719,0.258,0.023	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.27:0.753,0.224,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.936,0.063,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.158:0.852,0.138,0.01	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.076:0.924,0.075,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.062:0.939,0.06,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.22:0,0.78,0.22	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.298:0.725,0.253,0.022	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.148:0.857,0.138,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.202:0.808,0.182,0.01	0|0:0:1,0,0	1|0:0.307:0.717,0.259,0.024	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.192:0.816,0.175,0.008	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.269:0.746,0.239,0.015	0|0:0:1,0,0	0|0:0.273:0.745,0.237,0.018	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.127:0.885,0.103,0.012	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.263:0.752,0.232,0.015	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15155827	SNP-3.15154473.	A	G	.	PASS	AR2=0.989;DR2=0.99;AF=0.34	GT:DS:GP	0|0:0.119:0.886,0.108,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.886:0.005,0.105,0.89	1|1:1.933:0.001,0.065,0.934	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.96:0.001,0.039,0.96	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.955:0.001,0.043,0.956	1|1:1.969:0,0.031,0.969	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.172:0.834,0.16,0.006	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.201:0.801,0.197,0.002	0|0:0:1,0,0	1|1:1.935:0.002,0.061,0.937	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.24:0.77,0.22,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.93,0.07,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:0.914:0.169,0.749,0.083	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.096:0.905,0.095,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.249:0.76,0.232,0.008	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:1.951:0.001,0.047,0.952	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.945:0.002,0.051,0.947	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.925:0.002,0.072,0.927	1|1:2:0,0,1	1|1:1.969:0,0.03,0.969	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.966:0,0.034,0.966	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.13:0.876,0.119,0.006	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.082:0.919,0.08,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15155951	SNP-3.15154597.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.402	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.061:0.94,0.058,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.024:0.976,0.024,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.077:0.924,0.076,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.106:0.898,0.099,0.004	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.02:0.98,0.019,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.931,0.068,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15158042	SNP-3.15156688.	C	A	.	PASS	AR2=0.992;DR2=0.992;AF=0.206	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.035,0	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.088:0.914,0.084,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.107:0.026,0.841,0.133	1|1:2:0,0,1	1|1:1.965:0,0.035,0.965	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.179:0.824,0.174,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	1|0:1.067:0.001,0.93,0.068	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.259:0.767,0.206,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.983:0.164,0.688,0.147	0|0:0:1,0,0
+3	15163259	SNP-3.15161905.	A	G	.	PASS	AR2=0.967;DR2=0.973;AF=0.322	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.713:0.017,0.253,0.73	1|1:2:0,0,1	1|1:1.765:0.011,0.214,0.776	1|1:1.79:0.008,0.195,0.798	1|1:1.789:0.012,0.187,0.801	1|1:1.762:0.012,0.213,0.775	0|0:0:1,0,0	1|1:1.882:0.002,0.114,0.884	1|1:1.874:0.004,0.119,0.878	1|1:1.966:0,0.034,0.966	1|1:1.816:0.01,0.164,0.826	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.765:0.008,0.22,0.772	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.812:0.007,0.173,0.82	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.939:0.001,0.06,0.939	1|1:2:0,0,1	1|1:1.875:0.002,0.12,0.878	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.136:0.871,0.123,0.006	0|0:0:1,0,0	1|0:0.502:0.523,0.452,0.025	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.574:0.514,0.399,0.087	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.092:0.91,0.088,0.002	1|1:2:0,0,1	0|0:0.2:0.808,0.184,0.008	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.92:0.001,0.078,0.921	0|0:0.047:0.953,0.047,0	0|0:0:1,0,0	1|1:1.973:0,0.027,0.973	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.957,0.043,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.217:0.792,0.199,0.009	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.21:0.055,0.68,0.265	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.196:0.812,0.18,0.008	0|0:0:1,0,0	1|1:1.794:0.006,0.193,0.8	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.929,0.07,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.864:0.004,0.128,0.868	1|1:2:0,0,1	1|1:1.81:0.011,0.168,0.821	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.943:0.001,0.055,0.944	1|1:1.788:0.013,0.186,0.801	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0.063:0.937,0.063,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.839:0.005,0.15,0.845	1|1:2:0,0,1	1|1:1.795:0.012,0.181,0.807	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.075:0.927,0.071,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.641:0.051,0.258,0.692	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.026:0.975,0.025,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.973:0,0.026,0.974	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.877:0.003,0.117,0.88	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.046:0.955,0.044,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15163904	SNP-3.15162550.	A	G	.	PASS	AR2=0.989;DR2=0.99;AF=0.367	GT:DS:GP	1|1:1.936:0.001,0.062,0.937	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.912:0.002,0.084,0.914	1|1:1.939:0.002,0.057,0.941	1|1:1.917:0.002,0.079,0.919	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.929:0.001,0.069,0.93	0|0:0:1,0,0	1|1:1.926:0.002,0.07,0.928	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.928:0.001,0.07,0.929	1|1:1.929:0.002,0.068,0.93	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.925:0.002,0.072,0.926	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.942:0.001,0.057,0.943	1|1:2:0,0,1	1|1:1.944:0.001,0.054,0.945	1|1:1.904:0.002,0.091,0.907	1|1:2:0,0,1	1|1:1.929:0.002,0.068,0.931	1|1:2:0,0,1	1|1:1.958:0.001,0.04,0.959	1|1:1.909:0.004,0.084,0.912	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.889:0.003,0.105,0.892	0|0:0:1,0,0	1|1:1.867:0.004,0.125,0.871	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.907:0.002,0.088,0.91	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.903:0.002,0.093,0.905	0|0:0:1,0,0	1|0:0.823:0.177,0.823,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.951:0,0.048,0.951	1|1:1.909:0.002,0.086,0.912	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.906:0.002,0.089,0.909	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.96:0.001,0.039,0.961	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.957:0.001,0.042,0.958	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.951:0,0.048,0.952	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.931:0.002,0.066,0.932	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.882:0.006,0.107,0.888	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.954:0.001,0.044,0.955	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.966:0,0.033,0.966	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.93:0.002,0.067,0.931	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15164146	SNP-3.15162792.	A	G	.	PASS	AR2=0.997;DR2=0.997;AF=0.387	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.941,0.059,0	0|0:0.024:0.977,0.023,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.952,0.047,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.168:0.835,0.162,0.003	0|0:0:1,0,0	0|0:0.175:0.83,0.165,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.948,0.052,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.973,0.027,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.007:0.002,0.989,0.009	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.948,0.052,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.984,0.016,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.082:0.918,0.081,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15164772	SNP-3.15163418.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.309	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.896:0.003,0.098,0.899	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.952:0.001,0.047,0.953	0|1:1:0,1,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15165486	SNP-3.15164132.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.39	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.163:0.844,0.148,0.007	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.169:0.838,0.154,0.008	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.16:0.847,0.146,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15165606	SNP-3.15164252.	A	G	.	PASS	AR2=0.971;DR2=0.98;AF=0.442	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.031:0.97,0.03,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.31:0.71,0.271,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.439:0.593,0.375,0.032	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.208:0.795,0.203,0.002	0|0:0.482:0.584,0.351,0.066	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.108:0.892,0.108,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.458:0.543,0.457,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.35:0.001,0.648,0.351	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.077:0.927,0.069,0.004	0|0:0:1,0,0	0|0:0.396:0.643,0.319,0.039	1|0:0.833:0.342,0.484,0.174	0|0:0.057:0.944,0.055,0.001	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.689:0.411,0.489,0.1	1|0:0.646:0.466,0.422,0.112	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:0.641:0.463,0.433,0.104	0|0:0.061:0.94,0.059,0.001	0|0:0.017:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.086:0.917,0.079,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.52:0.557,0.365,0.078	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15165621	SNP-3.15164267.	A	G	.	PASS	AR2=0.983;DR2=0.987;AF=0.362	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.074:0.928,0.07,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.222:0.785,0.208,0.007	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.099:0.902,0.096,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.728:0.018,0.235,0.747	1|1:1.708:0.019,0.253,0.728	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.735:0.018,0.229,0.753	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.732:0.015,0.237,0.747	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.783:0.008,0.202,0.79	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.462:0.56,0.419,0.021	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.749:0.015,0.22,0.764	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.715:0.021,0.244,0.735	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.937,0.062,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.114:0.892,0.102,0.006	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.728:0.021,0.231,0.748	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15165706	SNP-3.15164352.	A	G	.	PASS	AR2=0.997;DR2=0.997;AF=0.378	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.972:0,0.028,0.972	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:1.991:0,0.009,0.991	0|1:1:0,1,0	1|1:1.968:0,0.032,0.968	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:1.999:0,0.001,0.999	1|1:1.998:0,0.002,0.998	1|1:1.968:0.001,0.029,0.969	1|1:1.991:0,0.008,0.991	1|1:1.984:0,0.016,0.984	0|0:0:1,0,0	1|1:1.867:0,0.132,0.867	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.983:0,0.017,0.983	0|0:0.06:0.94,0.06,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.984:0,0.015,0.985	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.984:0,0.016,0.984	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.957:0,0.043,0.957	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.988:0,0.011,0.989	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.984:0,0.015,0.984	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:1.979:0,0.02,0.979	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.976:0,0.023,0.976	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15177294	SNP-3.15175940.	A	G	.	PASS	AR2=0.993;DR2=0.995;AF=0.352	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.813:0.01,0.166,0.824	1|1:1.787:0.012,0.189,0.799	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.814:0.009,0.167,0.824	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.513:0.047,0.393,0.56	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.904:0.002,0.091,0.907	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.887:0.003,0.107,0.89	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15177335	SNP-3.15175981.	A	G	.	PASS	AR2=0.994;DR2=0.995;AF=0.391	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.159:0.848,0.145,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.09:0.912,0.087,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.928,0.071,0.001	0|0:0.051:0.95,0.049,0.001	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.961,0.039,0	0|0:0:1,0,0	0|0:0.088:0.914,0.084,0.002	1|1:1.972:0,0.027,0.972	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.05:0.951,0.048,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0.001,0.03,0.969	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.108:0.897,0.098,0.005	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.071:0.93,0.068,0.002	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.049:0.951,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.062:0.938,0.061,0.001	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.133:0.874,0.118,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.148:0.859,0.134,0.007	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15178305	SNP-3.15176951.	C	A	.	PASS	AR2=0.991;DR2=0.992;AF=0.211	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.941,0.058,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.121:0.882,0.114,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.947:0.001,0.052,0.948	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.095:0.081,0.744,0.176	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.033:0.968,0.031,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.107:0.896,0.101,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.842:0.01,0.138,0.852	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.091:0.91,0.089,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.087:0.915,0.083,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|1:0.858:0.257,0.628,0.115	0|0:0:1,0,0
+3	15178849	SNP-3.15177495.	A	G	.	PASS	AR2=0.974;DR2=0.979;AF=0.291	GT:DS:GP	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.732:0.023,0.222,0.755	1|1:2:0,0,1	1|1:1.409:0.032,0.528,0.44	1|1:1.835:0.01,0.145,0.845	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.843:0.007,0.142,0.85	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.824:0.009,0.157,0.834	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.29:0.027,0.656,0.317	0|1:0.911:0.303,0.483,0.214	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.546:0.033,0.387,0.58	1|1:1.814:0.002,0.183,0.816	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.895:0.005,0.096,0.899	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.877:0.004,0.114,0.881	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.658:0.015,0.311,0.674	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.955:0.001,0.044,0.955	1|1:1.768:0.014,0.204,0.782	1|1:1.901:0.001,0.098,0.901	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.854:0.005,0.135,0.86	1|1:1.806:0.012,0.169,0.818	1|1:2:0,0,1	1|1:1.815:0.008,0.169,0.823	1|1:2:0,0,1	1|1:1.823:0.012,0.153,0.835	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.845:0.009,0.137,0.854	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.173:0.07,0.687,0.243	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.801:0.012,0.174,0.813	1|1:2:0,0,1	1|1:1.972:0,0.027,0.973	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15178882	SNP-3.15177528.	C	A	.	PASS	AR2=0.933;DR2=0.948;AF=0.248	GT:DS:GP	0|0:0.07:0.931,0.067,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.684:0.464,0.389,0.148	0|0:0.279:0.738,0.246,0.017	0|0:0:1,0,0	0|0:0.312:0.719,0.25,0.031	0|0:0:1,0,0	0|0:0.449:0.601,0.348,0.05	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.089:0.913,0.085,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.158:0.846,0.149,0.004	0|0:0.074:0.927,0.073,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.185:0.816,0.183,0.001	0|0:0:1,0,0	0|0:0.044:0.957,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.946,0.054,0	0|0:0:1,0,0	0|0:0.034:0.966,0.034,0	0|0:0.039:0.961,0.039,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.045:0.956,0.044,0	1|1:2:0,0,1	0|0:0.385:0.662,0.292,0.047	0|0:0.126:0.875,0.123,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	0|1:0.674:0.439,0.448,0.113	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.711:0.007,0.276,0.718	1|0:1.73:0.018,0.234,0.748	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.044:0.956,0.043,0.001	0|1:0.998:0.243,0.516,0.241	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.93:0.003,0.064,0.933	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.578:0.046,0.33,0.624	0|0:0:1,0,0	1|1:1.562:0.05,0.338,0.612	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|1:0.777:0.375,0.472,0.153	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.631:0.035,0.298,0.666	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.762:0.379,0.481,0.141	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.051,0	0|1:0.821:0.353,0.474,0.174	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.043:0.958,0.041,0.001	1|1:2:0,0,1	0|1:0.933:0.325,0.418,0.258	1|1:2:0,0,1	1|1:1.951:0.001,0.048,0.952	1|1:1.964:0,0.035,0.965	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|1:0.845:0.157,0.84,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.1:0.902,0.095,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.077:0.926,0.071,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.062:0.94,0.059,0.001	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.333:0.693,0.28,0.027	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.368:0.665,0.302,0.033	1|1:2:0,0,1	0|0:0.586:0.503,0.407,0.089	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.871:0.008,0.112,0.879	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.017:0.983,0.016,0	1|1:2:0,0,1	0|0:0.19:0.837,0.135,0.027	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.373:0.673,0.281,0.046	0|0:0:1,0,0	0|0:0.022:0.978,0.021,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.052:0.949,0.05,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.953,0.047,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.032:0.968,0.031,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.03:0.97,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15180161	SNP-3.15178807.	C	A	.	PASS	AR2=0.948;DR2=0.96;AF=0.264	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.841:0.011,0.138,0.852	1|1:2:0,0,1	1|1:1.852:0.009,0.129,0.862	1|1:1.841:0.011,0.138,0.852	1|1:2:0,0,1	1|1:1.778:0.012,0.197,0.79	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.793:0.012,0.184,0.804	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.268:0.126,0.479,0.394	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	0|1:0.992:0.218,0.571,0.211	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.977:0,0.023,0.977	1|1:2:0,0,1	1|0:1.431:0.084,0.401,0.515	1|1:1.588:0.031,0.35,0.619	0|0:0:1,0,0	0|1:1.008:0.26,0.472,0.268	1|1:1.764:0.013,0.21,0.777	1|1:1.355:0.088,0.468,0.443	1|1:1.401:0.081,0.436,0.482	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.647:0.038,0.278,0.685	1|0:1.23:0.132,0.506,0.362	1|1:1.572:0.048,0.333,0.619	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.791:0.012,0.185,0.803	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.903:0.003,0.091,0.906	0|0:0:1,0,0	0|1:1.271:0.139,0.451,0.41	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.744:0.015,0.225,0.759	0|0:0:1,0,0	0|1:1.421:0.081,0.417,0.502	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.953:0.003,0.042,0.956	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.927:0.002,0.07,0.928	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.607:0.042,0.308,0.649	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.837:0.009,0.144,0.847	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.119:0.89,0.1,0.009	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.478:0.075,0.372,0.553	0|0:0:1,0,0
+3	15180305	SNP-3.15178951.	A	G	.	PASS	AR2=0.942;DR2=0.955;AF=0.248	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.357:0.07,0.504,0.426	1|0:1.165:0.112,0.61,0.278	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.307:0.081,0.531,0.388	0|1:1.413:0.05,0.486,0.463	1|1:2:0,0,1	1|1:1.703:0.017,0.262,0.721	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.606:0.048,0.298,0.654	1|1:1.349:0.087,0.476,0.436	0|0:0.715:0.447,0.39,0.162	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.231:0.782,0.205,0.013	0|0:0:1,0,0	0|0:0.118:0.886,0.109,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.17:0.834,0.161,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.179:0.827,0.166,0.007	0|0:0:1,0,0	0|0:0.075:0.926,0.073,0.001	1|1:2:0,0,1	0|1:1.26:0.057,0.625,0.318	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.26:0.007,0.726,0.267	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.162:0.846,0.146,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.145:0.862,0.131,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.191:0.817,0.175,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.184:0.823,0.169,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.297:0.102,0.5,0.398	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.092:0.125,0.658,0.217	0|0:0:1,0,0	0|0:0.297:0.72,0.263,0.017	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.884:0.005,0.106,0.889	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.741:0.021,0.217,0.762	0|1:0.869:0.306,0.519,0.175	0|1:1.294:0.019,0.667,0.314	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.975:0.001,0.024,0.976	1|1:2:0,0,1	1|1:1.501:0.114,0.272,0.615	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.032:0.968,0.032,0	0|0:0:1,0,0	0|0:0.051:0.949,0.051,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.89:0.004,0.101,0.895	0|0:0:1,0,0	0|0:0.978:0.313,0.396,0.291	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.908:0.004,0.084,0.912	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15180782	SNP-3.15179428.	C	A	.	PASS	AR2=0.92;DR2=0.94;AF=0.295	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.543:0.465,0.527,0.008	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.123:0.2,0.477,0.323	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.168:0.841,0.15,0.009	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.995:0.231,0.542,0.226	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.304:0.712,0.273,0.015	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.291:0.145,0.419,0.436	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.212:0.155,0.478,0.367	0|0:0:1,0,0	1|0:0.62:0.387,0.606,0.007	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	1|1:1.79:0.004,0.201,0.795	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.968:0,0.031,0.968	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.268:0.124,0.484,0.392	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.944:0.002,0.052,0.946	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.988:0.262,0.488,0.25	0|0:0:1,0,0	1|1:1.804:0.014,0.169,0.817	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:1.245:0.158,0.439,0.403	0|0:0:1,0,0	0|0:0.158:0.859,0.125,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.901:0.313,0.472,0.215	0|0:0.603:0.406,0.585,0.009	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.929:0.321,0.429,0.25	1|1:2:0,0,1	1|1:1.914:0.002,0.082,0.916	1|1:1.91:0.001,0.088,0.911	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.989:0,0.01,0.989	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.938,0.061,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.967:0.001,0.031,0.968	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.588:0.494,0.424,0.082	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.529:0.541,0.388,0.07	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.39:0.098,0.414,0.488	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.43:0.624,0.323,0.054	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.757:0.018,0.207,0.775	1|1:1.261:0.178,0.383,0.439	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.423:0.095,0.388,0.518	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.222:0.152,0.475,0.373	0|0:0:1,0,0	0|0:0.468:0.621,0.289,0.09	0|1:1.076:0.244,0.436,0.32	1|1:1.361:0.106,0.426,0.467	0|0:0:1,0,0	0|0:0.836:0.378,0.408,0.214	1|1:2:0,0,1	1|1:1.817:0.031,0.122,0.848	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.852:0.005,0.139,0.857	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.953,0.047,0	0|0:0:1,0,0
+3	15181560	SNP-3.15180206.	A	G	.	PASS	AR2=0.99;DR2=0.992;AF=0.297	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.953:0,0.047,0.953	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:1.725:0.027,0.221,0.752	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.779:0.016,0.19,0.794	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.941:0.001,0.057,0.942	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.802:0.017,0.163,0.819	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.149:0.851,0.149,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0.16:0.84,0.16,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.543:0.069,0.32,0.611	1|1:2:0,0,1	1|1:1.952:0.001,0.045,0.953	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.771:0.016,0.198,0.786	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15181674	SNP-3.15180320.	C	A	.	PASS	AR2=0.99;DR2=0.992;AF=0.284	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.976:0,0.023,0.976	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.982:0,0.017,0.983	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.395:0.032,0.541,0.427	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.967:0,0.033,0.967	1|1:1.873:0.003,0.12,0.876	1|1:1.894:0.001,0.103,0.895	0|0:0:1,0,0	1|1:1.547:0.068,0.317,0.615	1|1:1.985:0,0.015,0.985	1|1:1.913:0.002,0.083,0.915	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.943:0.001,0.054,0.944	1|1:2:0,0,1	1|1:1.935:0.001,0.062,0.937	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.982:0,0.017,0.982	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:1.959:0,0.04,0.959	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.901:0.002,0.095,0.903	1|1:1.783:0.009,0.199,0.792	0|0:0:1,0,0	1|1:1.964:0.001,0.034,0.965	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15182020	SNP-3.15180666.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.299	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0.004:0.996,0.004,0	0|0:0.004:0.996,0.004,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	1|1:1.843:0,0.157,0.843	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0
+3	15182293	SNP-3.15180939.	C	A	.	PASS	AR2=0.981;DR2=0.985;AF=0.285	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.954:0.001,0.044,0.955	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.963:0,0.036,0.963	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.954:0.001,0.044,0.955	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.593:0.048,0.312,0.64	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.642:0.034,0.29,0.676	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.58:0.034,0.352,0.614	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.769:0.013,0.205,0.782	1|1:1.736:0.01,0.243,0.747	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.839:0.007,0.147,0.846	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.86:0.004,0.132,0.864	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.706:0.018,0.259,0.724	1|1:1.635:0.032,0.302,0.666	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.962:0,0.037,0.962	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.751:0.025,0.199,0.776	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.988:0,0.011,0.989	1|1:2:0,0,1	1|1:1.642:0.025,0.309,0.666	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.865:0.009,0.117,0.874	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15183245	SNP-3.15181891.	A	G	.	PASS	AR2=0.996;DR2=0.997;AF=0.391	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.952,0.047,0	0|0:0.032:0.969,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.261:0.75,0.24,0.01	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.116:0.884,0.116,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.021:0.979,0.02,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.299:0.709,0.284,0.008	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.027:0.973,0.026,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15183327	SNP-3.15181973.	A	G	.	PASS	AR2=0.981;DR2=0.984;AF=0.349	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.131:0.878,0.114,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.695:0.053,0.199,0.748	0|0:0:1,0,0	1|1:1.821:0.01,0.159,0.831	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.802:0.013,0.172,0.815	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.552:0.019,0.41,0.571	1|1:1.817:0.008,0.166,0.826	0|1:1:0,1,0	1|1:1.823:0.009,0.159,0.832	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.801:0.003,0.192,0.804	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.846:0.006,0.141,0.853	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.944:0.001,0.055,0.945	1|1:1.88:0.007,0.107,0.887	1|1:1.642:0.033,0.292,0.675	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.854:0.007,0.132,0.861	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.78:0.011,0.199,0.79	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.795:0.013,0.18,0.808	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.943:0.001,0.055,0.944	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.912:0.002,0.083,0.914	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.869:0.007,0.117,0.876	1|1:2:0,0,1	1|1:1.858:0.004,0.133,0.862	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.965,0.034,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.791:0.012,0.185,0.803	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.952,0.047,0.001	1|1:2:0,0,1	0|0:0.03:0.97,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.951:0.001,0.048,0.951	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.948:0.002,0.049,0.95	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15183542	SNP-3.15182188.	A	G	.	PASS	AR2=0.974;DR2=0.981;AF=0.432	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.639:0.464,0.434,0.102	0|0:0.007:0.993,0.007,0	0|0:0.5:0.562,0.377,0.062	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.019,0	0|0:0:1,0,0	0|0:0.045:0.956,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.036:0.964,0.036,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.302:0.706,0.286,0.008	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.121:0.883,0.112,0.004	1|0:0.745:0.34,0.574,0.086	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.219:0.795,0.191,0.014	0|1:0.813:0.368,0.451,0.181	0|0:0.251:0.765,0.219,0.016	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.219:0.784,0.214,0.002	0|0:0.208:0.803,0.186,0.011	1|1:2:0,0,1	0|0:0.099:0.905,0.091,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.591:0.497,0.415,0.088	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.376:0.662,0.299,0.039	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.022,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.961,0.038,0.001	0|0:0.01:0.99,0.01,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.071:0.93,0.07,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.067:0.934,0.065,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.992,0.008,0	0|0:0.061:0.94,0.06,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.035:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.496:0.58,0.345,0.076	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15185690	SNP-3.15184336.	A	G	.	PASS	AR2=0.99;DR2=0.992;AF=0.3	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.453:0.066,0.416,0.519	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.756:0.004,0.236,0.76	1|1:2:0,0,1	1|1:1.947:0.001,0.051,0.948	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.918:0.002,0.079,0.92	1|1:1.954:0.001,0.045,0.954	1|0:1:0,1,0	1|1:1.937:0.001,0.06,0.938	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.968:0,0.031,0.968	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.011:0.989,0.011,0	1|1:2:0,0,1	0|0:0.008:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.823:0.008,0.16,0.832	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.921:0.002,0.075,0.923	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.925:0.001,0.074,0.926	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.936:0.002,0.06,0.938	1|1:2:0,0,1	1|1:1.948:0.002,0.048,0.95	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.887:0.002,0.109,0.889	1|1:1.811:0.007,0.175,0.818	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.961:0,0.038,0.961	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15185780	SNP-3.15184426.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.374	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.946:0.001,0.052,0.947	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.255:0.745,0.254,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.967:0,0.032,0.968	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.941:0.001,0.058,0.941	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.967:0,0.032,0.967	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.964:0,0.035,0.964	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.964:0,0.035,0.964	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15186485	SNP-3.15185131.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.379	GT:DS:GP	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.983:0,0.016,0.984	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:1.996:0,0.004,0.996	1|1:1.995:0,0.005,0.995	1|1:1.997:0,0.003,0.997	1|1:1.997:0,0.003,0.997	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:1.993:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:1.997:0,0.003,0.997	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	1|1:1.998:0,0.002,0.998	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15186576	SNP-3.15185222.	A	G	.	PASS	AR2=0.994;DR2=0.995;AF=0.315	GT:DS:GP	0|0:0:1,0,0	0|0:0.063:0.942,0.053,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.976:0,0.024,0.976	1|1:1.978:0,0.021,0.979	1|1:1.96:0,0.039,0.961	1|1:1.985:0,0.015,0.985	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.97:0,0.029,0.971	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0,0.031,0.968	1|1:2:0,0,1	1|1:1.974:0,0.025,0.975	1|1:1.968:0,0.031,0.969	1|1:1.963:0,0.036,0.964	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.952:0,0.047,0.953	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.005:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.706:0.003,0.288,0.709	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.968:0,0.031,0.968	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.966:0,0.033,0.967	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.967:0,0.032,0.967	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	1|1:1.968:0,0.031,0.968	1|1:1.971:0,0.029,0.971	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:1.982:0,0.018,0.982	1|1:1.79:0.006,0.197,0.797	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.962,0.038,0	0|0:0:1,0,0
+3	15187562	SNP-3.15186208.	A	G	.	PASS	AR2=0.875;DR2=0.905;AF=0.287	GT:DS:GP	1|1:0.99:0.271,0.468,0.261	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.255:0.225,0.295,0.48	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.633:0.492,0.384,0.125	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.319:0.084,0.512,0.403	1|1:2:0,0,1	1|0:0.84:0.321,0.517,0.162	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.378:0.682,0.257,0.061	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.76:0.028,0.185,0.787	1|1:2:0,0,1	1|1:1.453:0.051,0.445,0.504	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.985:0.249,0.518,0.234	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.455:0.081,0.383,0.536	0|1:0.985:0.238,0.538,0.223	1|1:2:0,0,1	1|1:0.946:0.274,0.505,0.22	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.538:0.53,0.402,0.068	1|1:1.504:0.047,0.402,0.551	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.555:0.457,0.53,0.013	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.239:0.14,0.481,0.379	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.85:0.349,0.453,0.199	0|0:0:1,0,0	0|0:0.322:0.7,0.277,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.498:0.59,0.323,0.087	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.275:0.131,0.463,0.406	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.352:0.112,0.423,0.465	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:1.143:0.174,0.509,0.317	0|0:0:1,0,0	1|0:0.825:0.269,0.636,0.094	0|0:0.368:0.669,0.294,0.037	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.828:0.327,0.517,0.156	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.513:0.559,0.369,0.072	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.249:0.122,0.506,0.372	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.08:0.143,0.634,0.223	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.706:0.415,0.464,0.121	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.128:0.155,0.562,0.283	1|1:2:0,0,1	0|0:0.064:0.938,0.059,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.015:0.231,0.523,0.246	0|0:0:1,0,0	0|1:0.887:0.303,0.507,0.19	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.138:0.163,0.537,0.301	0|1:0.586:0.455,0.503,0.041	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.388:0.089,0.435,0.477	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.612:0.471,0.445,0.083	1|1:1.152:0.173,0.503,0.325	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.708:0.473,0.347,0.181	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.942,0.053,0.005	0|0:0:1,0,0	0|0:0.229:0.79,0.191,0.019	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.585:0.509,0.397,0.094	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.811:0.339,0.51,0.15	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:1.106:0.212,0.469,0.319	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.323:0.705,0.266,0.028
+3	15187944	SNP-3.15186590.	A	G	.	PASS	AR2=0.989;DR2=0.992;AF=0.255	GT:DS:GP	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.178:0.14,0.541,0.319	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.34:0.118,0.423,0.458	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.911:0.003,0.083,0.914	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.886:0.321,0.471,0.207	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15188301	SNP-3.15186947.	A	G	.	PASS	AR2=0.985;DR2=0.987;AF=0.362	GT:DS:GP	1|1:1.85:0.007,0.137,0.856	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.127:0.876,0.12,0.004	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.05:0.951,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.118:0.887,0.108,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.26:0.773,0.194,0.033	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.103:0.901,0.095,0.004	0|0:0:1,0,0	0|0:0.122:0.881,0.116,0.003	0|0:0.074:0.928,0.07,0.002	1|0:1:0,1,0	1|1:1.974:0,0.026,0.974	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.949:0.001,0.05,0.95	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.833:0.007,0.152,0.84	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.787:0.011,0.192,0.797	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.92:0.002,0.076,0.922	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.868:0.002,0.127,0.87	0|0:0.041:0.959,0.041,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.406:0.038,0.517,0.445	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.95:0.001,0.049,0.951	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.816:0.008,0.169,0.824	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.936:0.001,0.061,0.938	1|1:2:0,0,1	1|1:1.961:0,0.038,0.962	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.11:0.894,0.103,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.946:0.001,0.052,0.947	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.958,0.041,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.967,0.032,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.967:0.001,0.032,0.967	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.951,0.049,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.964:0,0.036,0.964	1|1:1.944:0,0.055,0.944	0|1:1:0,1,0	1|1:2:0,0,1
+3	15189650	SNP-3.15188296.	A	G	.	PASS	AR2=0.971;DR2=0.976;AF=0.427	GT:DS:GP	1|1:1.952:0.001,0.047,0.953	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.88:0.264,0.591,0.145	0|0:0.306:0.716,0.262,0.022	0|0:0.335:0.691,0.283,0.026	0|0:0.407:0.641,0.311,0.048	0|0:0.136:0.868,0.127,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.377:0.656,0.312,0.033	0|0:0:1,0,0	0|0:0.269:0.749,0.233,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.05,0.001	0|0:0.229:0.784,0.203,0.013	0|0:0:1,0,0	0|0:0.217:0.795,0.193,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.404:0.636,0.324,0.04	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.028,0.972	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.971:0,0.029,0.971	1|1:1.954:0.001,0.044,0.955	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.964:0,0.036,0.964	0|0:0.061:0.94,0.058,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.953:0.001,0.046,0.954	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	1|1:1.969:0,0.03,0.969	0|0:0:1,0,0	1|1:1.983:0,0.017,0.983	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.929:0.002,0.067,0.931	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.979:0,0.021,0.979	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.965:0,0.034,0.966	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	0|0:0.244:0.757,0.242,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.221:0.787,0.205,0.008	1|1:1.966:0,0.033,0.966	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.952:0.001,0.046,0.953	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.977:0,0.022,0.978	0|0:0:1,0,0	1|1:1.976:0,0.024,0.976	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.951:0.001,0.048,0.952	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.206:0.805,0.184,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.208:0.804,0.183,0.012	1|1:1.951:0.001,0.048,0.952	1|1:1.943:0.001,0.055,0.944	1|1:2:0,0,1	1|1:1.969:0,0.03,0.969	1|1:1.973:0,0.026,0.974	1|1:1.953:0,0.046,0.954	1|1:2:0,0,1	1|1:1.96:0.001,0.039,0.96	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.204:0.808,0.179,0.012	1|1:2:0,0,1	0|0:0.229:0.784,0.203,0.013	0|0:0.232:0.782,0.205,0.013	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.963:0,0.036,0.964	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.855:0.269,0.606,0.125	0|0:0:1,0,0	1|1:1.966:0,0.033,0.967	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.235:0.779,0.207,0.014	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.931:0.003,0.063,0.934	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.976:0,0.024,0.976	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.155:0.851,0.142,0.007	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.963:0,0.036,0.964	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1
+3	15189903	SNP-3.15188549.	A	G	.	PASS	AR2=0.993;DR2=0.994;AF=0.334	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.093:0.909,0.089,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.087:0.915,0.083,0.002	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.091:0.911,0.087,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.039:0.961,0.039,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.086:0.916,0.082,0.002	0|1:1:0,1,0	0|0:0.079:0.923,0.076,0.001	0|0:0.087:0.915,0.083,0.002	0|0:0.104:0.899,0.097,0.003	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.862:0,0.137,0.862	0|0:0:1,0,0	0|0:0.128:0.872,0.127,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.962:0,0.038,0.962	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.078:0.924,0.075,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:1.982:0,0.017,0.982	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.943:0.001,0.054,0.944	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.055:0.946,0.053,0.001	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.082:0.921,0.075,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.102:0.901,0.096,0.003	0|0:0:1,0,0	0|0:0:1,0,0
+3	15190247	SNP-3.15188893.	C	A	.	PASS	AR2=0.988;DR2=0.99;AF=0.274	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:1.787:0.017,0.179,0.804	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.098:0.902,0.098,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:0.879:0.121,0.879,0	1|1:1.768:0.014,0.204,0.782	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.756:0.015,0.213,0.771	1|1:1.779:0.012,0.196,0.792	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.836:0.009,0.146,0.845	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.585:0.032,0.351,0.617	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.77:0.019,0.192,0.789	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.794:0.016,0.174,0.81	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	15194289	SNP-3.15192935.	A	G	.	PASS	AR2=1;DR2=1;AF=0.383	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15194367	SNP-3.15193013.	A	G	.	PASS	AR2=0.994;DR2=0.996;AF=0.377	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.457:0.014,0.516,0.471	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.025:0.975,0.025,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.969:0,0.03,0.97	1|1:1.947:0.001,0.052,0.947	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.609:0.391,0.609,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.958:0.001,0.041,0.958	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.961:0,0.039,0.961	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.916:0.002,0.081,0.917	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.964:0,0.035,0.964	1|1:1.946:0.001,0.053,0.947	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.967:0,0.032,0.968	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.943:0.001,0.056,0.944	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.977:0,0.023,0.977	0|0:0:1,0,0	1|1:2:0,0,1
+3	15199663	SNP-3.15198309.	A	G	.	PASS	AR2=0.986;DR2=0.99;AF=0.352	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.663:0.013,0.312,0.675	1|0:1.272:0.017,0.693,0.289	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.946:0.001,0.052,0.947	1|1:1.862:0.004,0.129,0.867	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1.489:0.016,0.478,0.505	1|1:1.864:0.004,0.128,0.868	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.974:0,0.026,0.974	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.899:0.007,0.088,0.905	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.936:0.001,0.062,0.937	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.939:0.001,0.059,0.94	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.626:0.015,0.344,0.641	1|1:2:0,0,1	0|1:1.016:0.083,0.818,0.099	1|1:1.862:0.004,0.129,0.866	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.941:0.001,0.057,0.942	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.595:0.01,0.385,0.605	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.971:0,0.029,0.971	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	1|1:1.934:0.001,0.064,0.935	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15199752	SNP-3.15198398.	A	G	.	PASS	AR2=0.991;DR2=0.993;AF=0.306	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.867:0.006,0.122,0.872	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.939:0.002,0.057,0.941	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.886:0.004,0.106,0.89	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.77:0.004,0.222,0.774	1|1:1.974:0,0.025,0.974	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.965:0,0.034,0.966	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.891:0.001,0.107,0.892	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.997:0.005,0.993,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.902:0.003,0.093,0.904	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.947:0.001,0.051,0.948	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.849:0.017,0.118,0.865	1|1:1.949:0.001,0.048,0.95	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.96:0.001,0.038,0.961	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.435:0.082,0.402,0.516	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.944:0.002,0.053,0.946	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15199829	SNP-3.15198475.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.384	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.132:0.87,0.127,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15201959	SNP-3.15200605.	A	G	.	PASS	AR2=0.981;DR2=0.988;AF=0.282	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.883:0.017,0.084,0.899	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.378:0.064,0.494,0.442	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.641:0.464,0.431,0.105	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.632:0.469,0.429,0.102	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.938:0.001,0.06,0.939	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.806:0.383,0.429,0.188	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.641:0.464,0.431,0.105	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15202420	SNP-3.15201066.	A	G	.	PASS	AR2=0.924;DR2=0.941;AF=0.449	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.445:0.61,0.335,0.055	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.095:0.91,0.084,0.006	0|0:0.14:0.869,0.122,0.009	0|0:0:1,0,0	1|0:0.363:0.67,0.296,0.034	0|0:0.285:0.733,0.249,0.018	0|0:0.353:0.679,0.288,0.032	0|1:0.741:0.41,0.44,0.15	0|0:0:1,0,0	0|0:0.622:0.473,0.432,0.095	0|0:0:1,0,0	0|0:0.25:0.769,0.212,0.019	1|0:0.838:0.307,0.548,0.145	0|0:0:1,0,0	0|0:0.168:0.841,0.15,0.009	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.105:0.897,0.1,0.003	1|1:2:0,0,1	1|0:0.528:0.531,0.41,0.059	0|1:0.454:0.602,0.343,0.056	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.666:0.443,0.448,0.109	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.813:0.007,0.173,0.82	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.921:0.003,0.074,0.924	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.703:0.023,0.251,0.726	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.685:0.023,0.27,0.708	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.36:0.64,0.36,0	1|1:1.726:0.018,0.238,0.744	0|0:0.137:0.872,0.119,0.009	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.724:0.019,0.237,0.743	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.38:0.684,0.252,0.064	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.924,0.076,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.149:0.855,0.141,0.004	0|0:0.156:0.849,0.146,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.147:0.86,0.133,0.007	0|0:0.082:0.92,0.079,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.279:0.744,0.233,0.023	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.372:0.647,0.334,0.019	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.734:0.018,0.23,0.752	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.948:0.001,0.05,0.949	0|0:0.307:0.721,0.251,0.028	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.16:0.846,0.148,0.006	0|0:0.164:0.844,0.149,0.008	0|0:0.305:0.727,0.24,0.033	1|1:2:0,0,1	0|0:0.259:0.766,0.209,0.025	1|1:2:0,0,1	0|0:0.32:0.701,0.278,0.021	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.024:0.977,0.023,0.001	1|1:1.97:0,0.03,0.97	0|0:0.274:0.755,0.215,0.029	1|1:1.942:0.001,0.056,0.943	1|1:1.886:0.005,0.105,0.89	0|0:0:1,0,0	0|0:0.379:0.648,0.325,0.027	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.497:0.588,0.327,0.085	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.943:0.001,0.055,0.944	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.566:0.51,0.415,0.076	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.907:0.002,0.089,0.909	0|0:0:1,0,0	1|1:1.923:0.002,0.073,0.925	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.433:0.615,0.338,0.047	0|0:0.353:0.678,0.292,0.031	1|1:2:0,0,1	0|0:0.539:0.535,0.391,0.074	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.269:0.76,0.21,0.029	0|0:0:1,0,0	1|1:1.745:0.015,0.225,0.76	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.294:0.728,0.25,0.022	0|0:0:1,0,0	0|0:0.033:0.968,0.032,0	0|0:0.087:0.915,0.083,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.383:0.665,0.287,0.048	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.85:0.005,0.14,0.855	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.141:0.868,0.123,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.252:0.774,0.199,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.024:0.977,0.023,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.215:0.157,0.47,0.373	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.052:0.95,0.049,0.002	1|1:2:0,0,1
+3	15206365	SNP-3.15205011.	A	G	.	PASS	AR2=0.946;DR2=0.957;AF=0.33	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.73:0.014,0.242,0.744	0|0:0:1,0,0	1|1:1.677:0.021,0.281,0.698	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.549:0.05,0.351,0.599	1|0:1.574:0.045,0.336,0.619	1|1:2:0,0,1	1|1:1.648:0.029,0.293,0.678	1|1:1.622:0.03,0.317,0.653	1|1:2:0,0,1	0|1:1.41:0.083,0.424,0.493	1|1:1.825:0.007,0.162,0.831	1|1:1.575:0.046,0.333,0.621	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.755:0.01,0.224,0.765	0|0:0:1,0,0	1|1:1.615:0.04,0.305,0.655	1|1:2:0,0,1	1|1:1.634:0.034,0.297,0.668	1|1:2:0,0,1	1|1:1.597:0.042,0.319,0.639	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.88:0.004,0.113,0.883	1|1:1.808:0.015,0.162,0.823	1|1:1.852:0.006,0.136,0.858	1|1:1.784:0.018,0.18,0.802	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.851:0.007,0.135,0.858	0|0:0:1,0,0	0|1:0.973:0.027,0.973,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.645:0.031,0.292,0.676	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.564:0.046,0.345,0.609	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.795:0.008,0.189,0.803	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.519:0.056,0.37,0.575	0|0:0:1,0,0	1|1:1.677:0.024,0.275,0.701	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.836:0.007,0.149,0.844	1|1:1.79:0.011,0.187,0.802	1|1:2:0,0,1	1|1:1.942:0,0.057,0.943	1|1:1.892:0.003,0.101,0.896	1|1:1.731:0.018,0.232,0.75	1|1:1.806:0.011,0.171,0.817	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.584:0.044,0.327,0.629	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.887:0.006,0.102,0.893	1|0:1.046:0.131,0.692,0.177	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.622:0.036,0.305,0.658	0|0:0:1,0,0	1|1:1.549:0.048,0.355,0.597	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.889:0.003,0.104,0.893	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0.001,0.019,0.98	1|1:2:0,0,1	1|1:1.945:0.001,0.053,0.946	1|1:1.809:0.009,0.172,0.819	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.773:0.013,0.201,0.786	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.916:0.001,0.082,0.917	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.905:0.003,0.088,0.908	0|0:0.052:0.949,0.05,0.001	1|1:2:0,0,1
+3	15208339	SNP-3.15206985.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.217	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.407:0.597,0.399,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.934,0.065,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.936,0.063,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:0.969:0.038,0.955,0.007	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.956,0.044,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.952,0.047,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15208375	SNP-3.15207021.	A	G	.	PASS	AR2=1;DR2=1;AF=0.28	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15208508	SNP-3.15207154.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.373	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.942:0.001,0.057,0.942	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.928:0.001,0.069,0.93	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.94:0.001,0.058,0.941	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15210667	SNP-3.15209313.	C	A	.	PASS	AR2=0.987;DR2=0.989;AF=0.33	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.41:0.611,0.368,0.021	0|0:0.064:0.938,0.061,0.001	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.081:0.921,0.078,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.234:0.77,0.225,0.005	0|0:0.082:0.919,0.079,0.002	0|0:0:1,0,0	0|0:0.074:0.927,0.071,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.12:0.883,0.115,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.112:0.89,0.108,0.002	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.084:0.918,0.08,0.002	0|0:0:1,0,0	0|0:0.09:0.912,0.087,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.064:0.937,0.063,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.062:0.939,0.061,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.124:0.88,0.116,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.106:0.896,0.101,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.077:0.924,0.074,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.094:0.909,0.088,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.453:0.578,0.392,0.03	0|0:0.091:0.911,0.087,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.087:0.915,0.083,0.002	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.953,0.047,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.036:0.965,0.034,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.094:0.909,0.088,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15210787	SNP-3.15209433.	A	G	.	PASS	AR2=0.996;DR2=0.997;AF=0.309	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.132:0.87,0.128,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.912:0.002,0.084,0.914	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.021:0.979,0.021,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.962,0.037,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.946,0.053,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.821:0.005,0.17,0.826	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.033:0.967,0.032,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.921:0.002,0.075,0.923	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.969:0,0.031,0.969	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.974:0,0.025,0.974	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.947,0.052,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15212642	SNP-3.15211288.	C	A	.	PASS	AR2=0.939;DR2=0.945;AF=0.494	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.539:0.116,0.229,0.655	1|0:0.928:0.28,0.513,0.208	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:0.984:0.255,0.506,0.239	1|0:0.882:0.31,0.498,0.192	1|0:0.9:0.299,0.501,0.199	1|0:0.792:0.365,0.479,0.156	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.403:0.131,0.334,0.535	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.007:0,0.993,0.007	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.831:0.346,0.478,0.177	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.837:0.342,0.479,0.179	0|1:0.933:0.285,0.497,0.218	0|1:1:0,1,0	1|0:1.059:0.224,0.494,0.283	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.396:0.111,0.383,0.506	0|1:0.918:0.291,0.501,0.208	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.115:0.2,0.485,0.315	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:0.936:0.285,0.494,0.221	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.833:0.344,0.479,0.177	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.845:0.337,0.482,0.181	1|0:1:0,1,0	0|1:0.801:0.362,0.476,0.162	0|1:0.958:0.275,0.491,0.234	0|0:0:1,0,0	0|1:0.842:0.335,0.487,0.178	0|0:0:1,0,0	1|0:0.878:0.316,0.489,0.195	1|1:2:0,0,1	1|0:0.838:0.34,0.482,0.178	0|1:0.954:0.279,0.488,0.233	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.762:0.383,0.473,0.144	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15212918	SNP-3.15211564.	A	G	.	PASS	AR2=0.991;DR2=0.992;AF=0.41	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.947,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.941,0.058,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0.045:0.955,0.044,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.951:0.001,0.047,0.952	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.986,0.014,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.602:0.421,0.556,0.023	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.878:0.154,0.815,0.032	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.98:0,0.02,0.98	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.86:0.005,0.13,0.865	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0.032:0.968,0.032,0	0|0:0.01:0.99,0.01,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0.005:0.995,0.005,0	0|0:0.025:0.975,0.025,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.015:0.985,0.014,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	1|1:1.994:0,0.006,0.994	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.041:0.959,0.04,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0.062:0.941,0.057,0.002	0|0:0:1,0,0	1|1:1.976:0,0.023,0.976	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.949:0.001,0.049,0.95	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.843:0.007,0.143,0.85	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.938,0.06,0.002	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.883:0.004,0.108,0.887	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.975:0,0.025,0.975	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.227:0.03,0.714,0.256	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15214904	SNP-3.15213550.	A	G	.	PASS	AR2=0.995;DR2=0.996;AF=0.346	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.186:0.816,0.183,0.002	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.187:0.822,0.169,0.009	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.933,0.067,0	0|0:0.232:0.783,0.201,0.016	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.051:0.951,0.047,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.217:0.788,0.206,0.006	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15215501	SNP-3.15214147.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.387	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.956,0.044,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.093:0.909,0.089,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15215914	SNP-3.15214560.	C	A	.	PASS	AR2=1;DR2=1;AF=0.302	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15216651	SNP-3.15215297.	C	A	.	PASS	AR2=1;DR2=1;AF=0.208	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15219769	SNP-3.15218415.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.299	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.831:0,0.169,0.831	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15222669	SNP-3.15221315.	A	G	.	PASS	AR2=1;DR2=1;AF=0.385	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15222691	SNP-3.15221337.	C	A	.	PASS	AR2=0.986;DR2=0.989;AF=0.336	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.297:0.724,0.254,0.021	0|0:0.093:0.91,0.087,0.003	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.19:0.818,0.173,0.008	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.139:0.868,0.126,0.006	0|0:0.192:0.817,0.173,0.01	0|0:0:1,0,0	0|0:0.186:0.823,0.168,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.091:0,0.909,0.091	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.198:0.811,0.18,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.213:0.798,0.19,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.188:0.822,0.168,0.01	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.249:0.768,0.216,0.016	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.502:0.62,0.257,0.123	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15223329	SNP-3.15221975.	A	G	.	PASS	AR2=1;DR2=1;AF=0.391	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15224013	SNP-3.15222659.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.382	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.088:0.912,0.088,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0.03:0.971,0.029,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.031:0.969,0.031,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.033:0.968,0.032,0	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.912:0,0.088,0.912	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.058:0.942,0.058,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15224158	SNP-3.15222804.	A	G	.	PASS	AR2=1;DR2=1;AF=0.327	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1.013:0,0.987,0.013	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15224552	SNP-3.15223198.	C	A	.	PASS	AR2=1;DR2=1;AF=0.21	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15224739	SNP-3.15223385.	A	G	.	PASS	AR2=0.997;DR2=0.997;AF=0.363	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.858:0.007,0.127,0.865	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.947:0.001,0.051,0.948	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.885:0.004,0.107,0.889	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.887:0.004,0.104,0.892	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.903:0.003,0.091,0.906	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.958:0.001,0.041,0.958	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.928:0.001,0.07,0.929	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15225273	SNP-3.15223919.	A	G	.	PASS	AR2=0.993;DR2=0.994;AF=0.388	GT:DS:GP	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.134:0.872,0.122,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.962,0.038,0.001	0|0:0:1,0,0	0|0:0.037:0.963,0.037,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0.06:0.941,0.058,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.077:0.923,0.077,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.331:0.767,0.135,0.098	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.083:0.919,0.079,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.064:0.937,0.061,0.001	1|1:2:0,0,1	0|0:0.031:0.969,0.031,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.077:0.925,0.074,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.962,0.037,0.001	1|1:1.921:0,0.079,0.921	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0.055:0.945,0.054,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.051:0.95,0.049,0.001	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.952,0.047,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.027,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15225820	SNP-3.15224466.	A	G	.	PASS	AR2=0.984;DR2=0.987;AF=0.416	GT:DS:GP	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.245:0.771,0.214,0.016	0|0:0.177:0.832,0.159,0.009	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.178:0.83,0.162,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.162:0.842,0.154,0.004	0|0:0.041:0.959,0.041,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.031:0.969,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.959,0.04,0	0|0:0:1,0,0	0|0:0.035:0.966,0.034,0	0|0:0.184:0.825,0.166,0.009	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.107:0.895,0.102,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.279:0.742,0.237,0.021	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.188:0.819,0.174,0.007	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.222:0.791,0.197,0.013	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.206:0.805,0.185,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.956,0.044,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.72:0.327,0.627,0.047	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.246:0.77,0.215,0.016	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.095:0.911,0.083,0.006	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.197:0.813,0.177,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.213:0.794,0.198,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.936,0.062,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.252:0.772,0.204,0.024	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1
+3	15226647	SNP-3.15225293.	A	G	.	PASS	AR2=0.99;DR2=0.992;AF=0.431	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.366:0.636,0.361,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.385:0.671,0.273,0.056	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.959:0.001,0.04,0.959	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.633:0.004,0.359,0.637	0|0:0:1,0,0	1|1:1.983:0,0.017,0.983	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.906:0,0.093,0.906	1|1:2:0,0,1	1|1:1.913:0.001,0.084,0.914	1|1:1.978:0,0.022,0.978	1|1:1.708:0.014,0.264,0.722	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.956:0.001,0.043,0.957	1|1:1.969:0,0.031,0.969	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.937:0.001,0.06,0.939	1|1:1.976:0,0.024,0.976	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.985:0,0.015,0.985	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.889:0.001,0.11,0.889	1|1:2:0,0,1	1|1:1.977:0,0.023,0.977	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.162:0.845,0.148,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.957:0.001,0.042,0.957	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.981:0,0.018,0.981	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.984:0,0.016,0.984	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.973:0,0.027,0.973	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.982:0,0.018,0.982	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.942:0,0.057,0.943	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993
+3	15233433	SNP-3.15232079.	C	A	.	PASS	AR2=0.956;DR2=0.965;AF=0.274	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.127:0.878,0.116,0.005	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.127:0.873,0.127,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.098:0.909,0.084,0.007	1|0:1:0,1,0	0|0:0.227:0.785,0.202,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.252:0.764,0.219,0.016	0|0:0.225:0.788,0.198,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.236:0.778,0.209,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.241:0.776,0.208,0.016	0|0:0.584:0.573,0.27,0.157	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.219:0.791,0.198,0.011	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.205:0.804,0.186,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.865:0.004,0.127,0.869	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.865:0.004,0.127,0.869	1|1:1.882:0.006,0.106,0.888	0|0:0:1,0,0	1|1:1.784:0.015,0.186,0.799	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.681:0.417,0.484,0.099	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.551:0.083,0.283,0.634	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.924:0.002,0.073,0.926	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.242:0.773,0.213,0.014	0|0:0.242:0.771,0.216,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.223:0.791,0.195,0.014	0|0:0:1,0,0	0|0:0.238:0.776,0.211,0.014	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.179:0.83,0.161,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.182:0.827,0.163,0.01	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.966:0,0.033,0.966	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.2:0.813,0.175,0.012	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.202:0.811,0.177,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.192:0.82,0.168,0.012	0|0:0.183:0.827,0.164,0.009	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.19:0.818,0.173,0.008	0|0:0:1,0,0	0|0:0.205:0.808,0.18,0.012	0|0:0:1,0,0	0|0:0.306:0.719,0.255,0.025	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.161:0.848,0.144,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.982:0,0.018,0.982	0|1:1:0,1,0
+3	15233559	SNP-3.15232205.	A	G	.	PASS	AR2=0.911;DR2=0.937;AF=0.337	GT:DS:GP	0|1:0.884:0.188,0.74,0.072	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.28:0.74,0.24,0.02	0|1:0.459:0.593,0.356,0.051	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.128:0.877,0.118,0.005	0|0:0.177:0.835,0.154,0.012	0|0:0.153:0.851,0.146,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.237:0.774,0.216,0.01	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.528:0.06,0.353,0.587	1|1:1.544:0.048,0.361,0.592	1|1:1.611:0.039,0.312,0.65	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.116:0.889,0.107,0.004	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.597:0.048,0.307,0.645	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.476:0.066,0.391,0.542	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.551:0.055,0.339,0.606	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.964:0.096,0.843,0.06	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.381:0.086,0.447,0.467	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.209:0.139,0.512,0.349	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.906:0,0.093,0.906	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.423:0.622,0.333,0.045	1|0:1:0,1,0	0|0:0.46:0.597,0.346,0.057	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.17:0.835,0.16,0.005	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.544:0.084,0.287,0.628	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.432:0.614,0.34,0.046	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.387:0.651,0.312,0.038	0|0:0:1,0,0	0|0:0.355:0.674,0.297,0.029	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.506:0.061,0.372,0.567	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.396:0.642,0.319,0.038	1|1:1.574:0.044,0.337,0.618	0|0:0.388:0.651,0.31,0.039	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.366:0.664,0.306,0.03	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.142:0.863,0.131,0.005	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.426:0.088,0.399,0.514	0|0:0:1,0,0	0|0:0.133:0.872,0.124,0.004	0|0:0.375:0.664,0.297,0.039	0|0:0.304:0.722,0.253,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.641:0.482,0.396,0.123	0|0:0.354:0.679,0.288,0.033	0|0:0.358:0.676,0.29,0.034	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.319:0.708,0.266,0.027	1|0:0.524:0.547,0.382,0.071	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.125:0.882,0.111,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.555:0.049,0.347,0.604	1|0:1.555:0.052,0.34,0.607	0|0:0:1,0,0	1|1:2:0,0,1
+3	15234063	SNP-3.15232709.	C	A	.	PASS	AR2=0.967;DR2=0.976;AF=0.311	GT:DS:GP	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.789:0.016,0.18,0.804	1|0:1:0,1,0	1|1:1.701:0.023,0.254,0.724	1|1:1.776:0.015,0.193,0.792	1|1:1.742:0.019,0.22,0.761	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.913:0.004,0.079,0.917	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.384:0.654,0.309,0.038	1|1:1.744:0.019,0.218,0.763	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.386:0.653,0.309,0.038	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.689:0.025,0.261,0.714	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.432:0.617,0.335,0.048	1|1:1.935:0.002,0.062,0.936	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.372:0.658,0.311,0.03	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.402:0.639,0.319,0.041	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.379:0.658,0.304,0.038	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.446:0.605,0.343,0.051	1|1:2:0,0,1	1|1:1.971:0,0.029,0.971	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.187:0.821,0.172,0.008	1|1:1.901:0.001,0.098,0.901	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.019:0.981,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.82:0.012,0.155,0.833	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.411:0.632,0.324,0.043	0|0:0.368:0.666,0.299,0.034	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15235833	SNP-3.15234479.	A	G	.	PASS	AR2=0.996;DR2=0.996;AF=0.399	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.074:0.928,0.07,0.002	0|0:0.117:0.886,0.111,0.003	0|1:1:0,1,0	0|0:0.058:0.943,0.057,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.931,0.068,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.94,0.059,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.086:0.916,0.081,0.003	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.951,0.048,0.001	0|0:0:1,0,0	0|0:0.077:0.924,0.075,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.065:0.937,0.061,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.049:0.951,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.934,0.065,0.001	0|0:0.133:0.871,0.126,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15239794	SNP-3.15238440.	A	G	.	PASS	AR2=0.922;DR2=0.94;AF=0.27	GT:DS:GP	1|0:0.711:0.406,0.477,0.117	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.631:0.458,0.453,0.089	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.016:0.144,0.695,0.16	1|1:2:0,0,1	1|0:1.098:0.185,0.531,0.283	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.558:0.032,0.379,0.59	0|0:0:1,0,0	0|0:0.829:0.338,0.495,0.167	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.211:0.183,0.422,0.395	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.756:0.388,0.469,0.144	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.846:0.33,0.495,0.176	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.503:0.547,0.402,0.051	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.818:0.346,0.491,0.163	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.707:0.409,0.474,0.116	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.669:0.387,0.557,0.056	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.499:0.563,0.375,0.062	0|0:0.793:0.351,0.504,0.145	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.964:0.234,0.569,0.198	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.898:0.003,0.097,0.9	1|1:1.169:0.174,0.483,0.343	1|1:1.675:0.022,0.281,0.697	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.322:0.697,0.284,0.019	1|0:1.462:0.069,0.4,0.531	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.714:0.411,0.464,0.125	0|0:0.288:0.712,0.288,0	0|0:0.583:0.511,0.395,0.094	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.582:0.496,0.425,0.079	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.71:0.418,0.455,0.127	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.414:0.089,0.408,0.503	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.784:0.36,0.495,0.144	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.594:0.09,0.226,0.684	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15241687	SNP-3.15240333.	C	A	.	PASS	AR2=0.993;DR2=0.994;AF=0.318	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.944,0.055,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.125:0.879,0.118,0.003	0|0:0.204:0.798,0.2,0.002	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.039:0.962,0.038,0.001	0|0:0.052:0.949,0.05,0.001	0|1:1:0,1,0	0|0:0.044:0.956,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.047:0.954,0.046,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.06:0.941,0.058,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.07:0.931,0.068,0.001	0|0:0.037:0.963,0.037,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.956,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.096:0.905,0.094,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.386:0,0.614,0.386	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.059:0.942,0.057,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.051:0.95,0.05,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.958,0.041,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15254129	SNP-3.15252775.	C	A	.	PASS	AR2=0.93;DR2=0.95;AF=0.236	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.544:0.037,0.382,0.581	1|1:1.695:0.029,0.246,0.724	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.891:0.009,0.091,0.9	0|1:1.627:0.034,0.306,0.661	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.479:0.081,0.36,0.559	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.695:0.025,0.255,0.72	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.959:0.256,0.529,0.215	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.497:0.58,0.343,0.077	1|1:2:0,0,1	0|0:0.923:0.291,0.494,0.214	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.94:0.232,0.595,0.173	1|1:0.887:0.306,0.501,0.193	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.522:0.557,0.363,0.079	1|0:0.864:0.326,0.484,0.19	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.658:0.028,0.286,0.686	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.582:0.044,0.33,0.626	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.886:0.008,0.097,0.895	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.366:0.672,0.289,0.038	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.289:0.254,0.202,0.543	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:1.727:0.02,0.234,0.746	0|0:0:1,0,0	1|1:1.133:0.269,0.33,0.402	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.69:0.027,0.257,0.716	1|1:2:0,0,1	1|1:1.272:0.176,0.375,0.448	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.262:0.166,0.407,0.427	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15254265	SNP-3.15252911.	C	A	.	PASS	AR2=0.922;DR2=0.938;AF=0.316	GT:DS:GP	0|0:0.036:0.964,0.035,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.705:0.427,0.442,0.131	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.643:0.445,0.467,0.088	0|0:1.123:0.186,0.504,0.31	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.852:0.331,0.486,0.183	1|1:1.319:0.116,0.449,0.435	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.764:0.365,0.506,0.129	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.957,0.042,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.607:0.512,0.368,0.119	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.954,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.959,0.04,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.584:0.499,0.418,0.083	0|0:0.162:0.848,0.142,0.01	1|1:2:0,0,1	1|1:1.947:0.003,0.047,0.95	1|1:1.984:0,0.016,0.984	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.264:0.76,0.216,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.098:0.903,0.095,0.001	0|0:0:1,0,0	0|0:0.032:0.968,0.032,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.078:0.238,0.446,0.316	0|0:0:1,0,0	1|0:1.05:0.241,0.467,0.292	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.547:0.526,0.402,0.072	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.971:0,0.029,0.971	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.853:0.299,0.549,0.152	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.845:0.333,0.489,0.178	1|1:2:0,0,1	0|1:0.594:0.481,0.443,0.076	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.243:0.793,0.171,0.036	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.123:0.19,0.497,0.313	0|0:0:1,0,0	1|1:1.304:0.127,0.442,0.431	0|0:0.422:0.636,0.305,0.058	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.672:0.024,0.279,0.696	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.062:0.272,0.394,0.334	0|0:0.337:0.705,0.252,0.043	1|1:2:0,0,1	1|1:1.732:0.045,0.178,0.777	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.12:0.193,0.493,0.313	0|0:0.414:0.66,0.265,0.075	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.47:0.074,0.382,0.544	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.03:0.97,0.03,0	1|1:1.624:0.031,0.313,0.656	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.597:0.612,0.179,0.209	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.11:0.203,0.483,0.313	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15290587	SNP-3.15289233.	A	G	.	PASS	AR2=0.975;DR2=0.98;AF=0.415	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.231:0.783,0.203,0.014	1|1:2:0,0,1	0|0:0.214:0.798,0.189,0.012	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.103:0.9,0.097,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.932,0.066,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.97,0.029,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.36:0.672,0.296,0.032	1|1:1.967:0,0.033,0.967	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.961:0,0.039,0.961	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.979:0,0.021,0.979	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.971:0,0.028,0.971	0|0:0.113:0.89,0.106,0.004	0|0:0.195:0.814,0.177,0.009	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0.1:0.903,0.094,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.512:0.572,0.344,0.084	0|0:0.273:0.742,0.242,0.016	0|0:0.206:0.801,0.192,0.007	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.128:0.88,0.113,0.007	0|0:0.196:0.812,0.181,0.008	0|0:0.177:0.829,0.165,0.006	0|0:0.05:0.95,0.05,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.194:0.826,0.154,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.53:0.551,0.367,0.082	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.838:0.22,0.723,0.057	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.114:0.889,0.108,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.232:0.781,0.207,0.012	0|0:0.191:0.82,0.169,0.011	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.127:0.88,0.113,0.007	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.287:0.721,0.27,0.009	1|1:2:0,0,1	1|1:1.975:0,0.025,0.975	1|1:1.965:0,0.035,0.965	1|1:2:0,0,1	0|0:0.08:0.922,0.076,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.953:0,0.046,0.954	1|1:2:0,0,1	0|0:0.119:0.884,0.113,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.099:0.904,0.093,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.97:0,0.029,0.971	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1
+3	15290918	SNP-3.15289564.	C	A	.	PASS	AR2=0.979;DR2=0.983;AF=0.29	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.797:0.013,0.177,0.81	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.926:0.003,0.068,0.929	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.678:0.429,0.465,0.107	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.703:0.019,0.26,0.721	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:1.644:0.015,0.327,0.659	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.907:0.003,0.087,0.91	1|1:1.662:0.026,0.285,0.688	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.959:0.001,0.04,0.959	1|1:1.785:0.011,0.193,0.796	1|1:1.702:0.02,0.259,0.722	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.623:0.037,0.303,0.66	1|1:1.758:0.013,0.215,0.772	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.903:0.002,0.094,0.904	1|1:1.827:0.006,0.16,0.834	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.932:0.003,0.062,0.935	0|0:0:1,0,0	1|1:1.831:0.01,0.15,0.84	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	1|1:1.918:0.001,0.08,0.919	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.83:0.01,0.15,0.84	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.931:0.003,0.062,0.934	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.05:0.952,0.047,0.002	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.928:0.003,0.066,0.931	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15291376	SNP-3.15290022.	A	G	.	PASS	AR2=0.993;DR2=0.995;AF=0.312	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.979:0.001,0.02,0.979	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:1.999:0,0.001,0.999	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.991:0,0.009,0.991	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.972:0,0.027,0.973	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.182:0.82,0.177,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.39:0.627,0.356,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.222:0.782,0.214,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.043:0.957,0.042,0	0|0:0.114:0.887,0.112,0.001	0|0:0.038:0.962,0.037,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.319:0.003,0.675,0.322	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	1|1:1.98:0,0.02,0.98	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15292524	SNP-3.15291170.	A	G	.	PASS	AR2=0.966;DR2=0.979;AF=0.452	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:0.468:0.586,0.36,0.054	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0.432:0.615,0.337,0.048	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.016,0.983	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.304:0.209,0.278,0.513	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.036:0.194,0.575,0.23	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.489:0.556,0.399,0.045	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.165:0.228,0.38,0.392	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.102:0.9,0.097,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.244:0.774,0.208,0.018	0|0:0:1,0,0	0|1:0.469:0.587,0.357,0.056	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.351:0.682,0.285,0.033	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.529:0.541,0.388,0.07	0|0:0.398:0.624,0.355,0.021	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.294:0.725,0.255,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.935:0.002,0.062,0.937	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1
+3	15292560	SNP-3.15291206.	A	G	.	PASS	AR2=0.994;DR2=0.994;AF=0.355	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.795:0.01,0.186,0.804	1|1:2:0,0,1	1|1:1.918:0.003,0.076,0.921	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.887:0.002,0.11,0.889	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.904:0.002,0.091,0.907	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.782:0.02,0.178,0.802	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.903:0.002,0.092,0.905	1|1:1.801:0.008,0.183,0.809	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.927:0.001,0.071,0.928	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.848:0.006,0.141,0.854	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.867:0.004,0.125,0.871	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15292626	SNP-3.15291272.	A	G	.	PASS	AR2=1;DR2=1;AF=0.387	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15293334	SNP-3.15291980.	A	G	.	PASS	AR2=0.989;DR2=0.991;AF=0.432	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.228:0.795,0.181,0.024	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.052:0.948,0.051,0.001	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.935,0.064,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.951,0.049,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.296:0.023,0.659,0.319	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.139:0.026,0.809,0.165	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1.073:0.029,0.87,0.102	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.287:0.733,0.247,0.02	0|0:0:1,0,0	0|0:0.347:0.684,0.285,0.031	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.22:0.793,0.194,0.013	1|1:2:0,0,1	0|0:0.216:0.798,0.187,0.015	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.04:0.96,0.039,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.066:0.935,0.064,0.001	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.97,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.06:0.941,0.058,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1
+3	15293985	SNP-3.15292631.	A	G	.	PASS	AR2=0.993;DR2=0.994;AF=0.359	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.975,0.025,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.946,0.054,0.001	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.907:0.002,0.09,0.909	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.89:0.003,0.103,0.893	1|1:2:0,0,1	1|1:1.865:0.002,0.131,0.867	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.925:0.001,0.073,0.926	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.13:0.873,0.124,0.003	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.046:0.955,0.045,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.036:0.964,0.036,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.969,0.031,0	0|0:0:1,0,0	0|0:0.032:0.968,0.032,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	1|1:1.934:0.001,0.064,0.935	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.975,0.025,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.976,0.024,0	0|0:0.028:0.972,0.028,0	0|0:0.098:0.904,0.095,0.002	0|0:0.043:0.958,0.042,0.001	0|0:0.046:0.955,0.045,0	0|0:0.041:0.96,0.039,0.001	0|0:0.043:0.957,0.042,0.001	0|0:0:1,0,0	0|0:0.063:0.939,0.059,0.002	0|0:0:1,0,0	0|0:0.03:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15294598	SNP-3.15293244.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.374	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.872:0.001,0.127,0.873	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.961:0.001,0.038,0.962	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.976:0,0.024,0.976	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.62:0,0.379,0.621	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15294874	SNP-3.15293520.	A	G	.	PASS	AR2=0.994;DR2=0.994;AF=0.365	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.929:0.001,0.069,0.93	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.948:0.001,0.05,0.949	1|1:1.761:0.009,0.221,0.77	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.963:0.001,0.035,0.964	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.979:0.075,0.871,0.054	1|1:2:0,0,1	1|1:1.846:0.007,0.141,0.853	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.886:0.002,0.109,0.889	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.961:0.04,0.96,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.945:0,0.054,0.946	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.935:0.001,0.064,0.936	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.956:0,0.043,0.956	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.889:0.003,0.106,0.891	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.966:0,0.033,0.966	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.902:0,0.097,0.902	1|1:1.958:0.001,0.041,0.959	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.95:0,0.05,0.95	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15301525	SNP-3.15300171.	C	A	.	PASS	AR2=0.933;DR2=0.95;AF=0.3	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.512:0.063,0.362,0.575	1|1:2:0,0,1	1|1:1.504:0.077,0.342,0.581	0|1:1.067:0.184,0.566,0.25	1|1:1.501:0.07,0.36,0.571	0|1:1.331:0.091,0.487,0.422	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.862:0.011,0.116,0.873	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.956,0.043,0	0|0:0:1,0,0	0|0:0.104:0.897,0.103,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.218:0.786,0.211,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.098:0.902,0.098,0	0|0:0.057:0.944,0.056,0.001	0|0:0.11:0.893,0.104,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.038:0.962,0.037,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.131:0.25,0.369,0.381	0|0:0:1,0,0	0|0:0.239:0.776,0.209,0.015	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.108:0.894,0.103,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.519:0.051,0.379,0.57	0|0:0.359:0.678,0.285,0.037	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.822:0,0.178,0.822	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.664:0.023,0.289,0.687	1|1:1.791:0,0.208,0.792	1|1:1.766:0.008,0.219,0.773	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.654:0.021,0.305,0.675	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.591:0.424,0.561,0.015	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.885:0.001,0.113,0.886	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.779:0,0.221,0.779	1|1:1.34:0.121,0.418,0.461	0|0:0:1,0,0	1|1:1.664:0.034,0.268,0.698	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.747:0.035,0.183,0.782	1|1:1.919:0.004,0.074,0.922	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	0|0:0:1,0,0	1|1:1.73:0.004,0.261,0.734	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.523:0.026,0.425,0.549	0|0:0:1,0,0	0|1:1.212:0.07,0.649,0.282	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.156:0.847,0.149,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.982,0.018,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.62:0.426,0.528,0.046	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.671:0.005,0.318,0.676	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.841:0.008,0.144,0.848	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.904,0.096,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.772:0.006,0.215,0.779	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.342:0.105,0.447,0.447	0|0:0.128:0.876,0.119,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.109:0.893,0.105,0.002	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.697:0.063,0.178,0.759	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.904:0.003,0.091,0.907	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15304027	SNP-3.15302673.	A	G	.	PASS	AR2=0.983;DR2=0.986;AF=0.432	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0.059:0.942,0.058,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.142:0.863,0.132,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.146:0.859,0.135,0.006	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.233:0.775,0.217,0.008	0|0:0:1,0,0	0|0:0.084:0.917,0.082,0.001	0|0:0:1,0,0	0|0:0.045:0.956,0.042,0.001	0|0:0.161:0.842,0.156,0.003	0|0:0.138:0.866,0.13,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.955,0.045,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.117:0.888,0.107,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.108:0,0.892,0.108	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.058:0.001,0.939,0.059	0|1:1.137:0,0.863,0.137	0|1:1.012:0.009,0.97,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.153:0.851,0.146,0.004	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.985:0.067,0.88,0.052	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.998:0.019,0.964,0.017	0|0:0.348:0.672,0.309,0.02	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.848:0.153,0.845,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.034:0.967,0.033,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.038:0.962,0.037,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.185:0.821,0.174,0.006	0|0:0.062:0.94,0.058,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.274:0.752,0.222,0.026	1|1:2:0,0,1	0|0:0.26:0.743,0.254,0.003	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.191:0.813,0.184,0.004	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0.129:0.875,0.121,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.09:0.912,0.086,0.002	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	0|0:0.21:0.802,0.186,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999
+3	15309510	SNP-3.15308156.	A	G	.	PASS	AR2=0.989;DR2=0.99;AF=0.436	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.937,0.061,0.001	0|0:0:1,0,0	0|0:0.3:0.73,0.241,0.03	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.269:0.749,0.233,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.264:0.754,0.228,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.941,0.058,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.109:0.895,0.101,0.004	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.979:0.049,0.923,0.028	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.944,0.055,0.001	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.056:0.944,0.055,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.202:0.806,0.185,0.009	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0.111:0.894,0.1,0.005	0|1:1:0,1,0	0|0:0.211:0.8,0.189,0.011	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.118:0.884,0.115,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.265:0.818,0.098,0.084	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.055:0.946,0.053,0.001	1|1:2:0,0,1
+3	15309552	SNP-3.15308198.	A	G	.	PASS	AR2=0.995;DR2=0.997;AF=0.377	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.958:0.001,0.041,0.958	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.783:0.004,0.209,0.787	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.553:0.06,0.328,0.613	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.25:0.758,0.234,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15315887	SNP-3.15314533.	C	A	.	PASS	AR2=1;DR2=1;AF=0.198	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15316277	SNP-3.15314923.	C	A	.	PASS	AR2=0.965;DR2=0.977;AF=0.273	GT:DS:GP	0|0:0:1,0,0	1|0:1.629:0.045,0.281,0.674	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.303:0.136,0.425,0.439	0|0:0.433:0.621,0.325,0.054	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.932,0.063,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.144:0.868,0.12,0.012	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.269:0.191,0.349,0.46	0|0:0.23:0.773,0.224,0.003	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:1.947:0.003,0.048,0.95	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.904:0,0.096,0.904	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	1|1:1.98:0,0.019,0.98	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	1|1:1.979:0,0.02,0.979	0|0:0:1,0,0	1|1:1.979:0,0.021,0.979	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	0|0:0:1,0,0	1|1:1.498:0.072,0.358,0.57	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	1|1:1.982:0,0.017,0.983	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.134:0.873,0.121,0.006	0|0:0:1,0,0	0|0:0.324:0.698,0.28,0.022	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.987:0,0.012,0.987	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.236:0.79,0.185,0.025	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.979:0,0.021,0.979	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.981:0,0.019,0.981	0|0:0.074:0.931,0.064,0.005	1|1:1.98:0,0.02,0.98	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.293:0.714,0.278,0.007	1|1:2:0,0,1	0|0:0.154:0.858,0.13,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.665:0.447,0.441,0.112	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.964:0.001,0.035,0.965	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.981:0,0.018,0.981	0|0:0:1,0,0
+3	15316494	SNP-3.15315140.	A	G	.	PASS	AR2=1;DR2=1;AF=0.383	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.93:0.07,0.93,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15318459	SNP-3.15317105.	A	G	.	PASS	AR2=0.956;DR2=0.966;AF=0.269	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.559:0.049,0.344,0.607	1|1:1.627:0.035,0.302,0.662	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.81:0.009,0.171,0.819	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.697:0.021,0.261,0.718	1|1:1.638:0.036,0.291,0.674	1|1:1.559:0.048,0.345,0.607	1|1:1.579:0.045,0.332,0.624	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.641:0.032,0.294,0.674	1|1:1.867:0.014,0.106,0.881	1|1:1.849:0.006,0.139,0.855	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.442:0.097,0.363,0.539	1|1:1.774:0.014,0.198,0.788	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.962,0.037,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.106:0.9,0.094,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.119:0.887,0.107,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.841:0.187,0.784,0.029	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.842:0.005,0.148,0.847	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.673:0.011,0.304,0.684	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.651:0.03,0.289,0.681	1|1:1.806:0.016,0.162,0.822	0|0:0:1,0,0	1|1:1.671:0.028,0.274,0.698	1|1:1.637:0.032,0.299,0.669	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.044:0.956,0.044,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.951:0.001,0.048,0.952	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.787:0.008,0.198,0.795	1|1:1.649:0.035,0.28,0.685	1|1:1.934:0.001,0.063,0.936	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.549:0.051,0.348,0.601	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.103:0.903,0.091,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.931,0.067,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.527:0.055,0.362,0.582	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15319991	SNP-3.15318637.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.34	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.857:0.002,0.139,0.859	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.977:0,0.023,0.977	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15320714	SNP-3.15319360.	A	G	.	PASS	AR2=0.98;DR2=0.983;AF=0.342	GT:DS:GP	0|0:0.076:0.924,0.076,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.024:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.901:0.002,0.095,0.903	1|1:1.711:0.02,0.249,0.731	0|0:0:1,0,0	1|1:1.868:0.004,0.123,0.872	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.756:0.016,0.212,0.772	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.902:0.002,0.093,0.904	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.834:0.007,0.152,0.841	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.86:0.005,0.129,0.865	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.938:0.001,0.06,0.939	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.062:0.938,0.061,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.067:0.936,0.062,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.108:0.894,0.104,0.002	0|0:0.17:0.837,0.157,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.079:0.099,0.724,0.178	0|0:0.099:0.904,0.093,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.124:0.88,0.115,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.951,0.049,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.084:0.918,0.079,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.944,0.056,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.971:0,0.029,0.971	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.924:0.002,0.073,0.925	0|1:1:0,1,0	1|1:1.914:0.002,0.082,0.916	0|0:0:1,0,0	0|0:0.048:0.952,0.048,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.903:0.003,0.092,0.906	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.931:0.003,0.064,0.933	1|1:1.738:0.018,0.226,0.756	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.201:0.8,0.199,0.001	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.081:0.92,0.078,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.037:0.963,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	1|1:2:0,0,1	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.495:0.507,0.491,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.807:0.009,0.174,0.817	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15321314	SNP-3.15319960.	A	G	.	PASS	AR2=0.984;DR2=0.989;AF=0.383	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.244:0.778,0.201,0.022	1|1:0.912:0.365,0.359,0.277	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.266:0.758,0.218,0.024	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.001:0,0.999,0.001	0|0:0.085:0.916,0.082,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.097:0.903,0.096,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.944,0.055,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.969,0.031,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:0.778:0.223,0.776,0.001	0|1:0.775:0.225,0.775,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.089:0.912,0.088,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.112:0.891,0.105,0.003	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.064:0.938,0.061,0.001	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.084:0.918,0.081,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.118:0.886,0.111,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.13:0.872,0.126,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.094:0.908,0.09,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0
+3	15321781	SNP-3.15320427.	A	G	.	PASS	AR2=1;DR2=1;AF=0.307	GT:DS:GP	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15323105	SNP-3.15321751.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.288	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.066:0.935,0.064,0.001	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.077:0.925,0.073,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|1:1:0,1,0	0|0:0.034:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.39:0.638,0.333,0.029	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.936,0.063,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.33:0.681,0.309,0.011	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.094:0.908,0.09,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15323126	SNP-3.15321772.	C	A	.	PASS	AR2=0.898;DR2=0.919;AF=0.51	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.927:0.002,0.068,0.93	1|1:2:0,0,1	1|1:1.948:0.002,0.049,0.949	1|1:1.882:0.004,0.11,0.886	1|1:1.924:0.002,0.071,0.926	1|1:1.885:0.003,0.11,0.887	1|1:1.881:0.006,0.108,0.886	1|0:1.135:0.187,0.492,0.322	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.193:0.158,0.491,0.351	0|1:1.141:0.186,0.486,0.328	1|0:1.143:0.184,0.489,0.327	1|1:2:0,0,1	1|0:1.311:0.091,0.507,0.402	0|1:1.172:0.173,0.482,0.345	1|1:2:0,0,1	1|0:1.288:0.129,0.454,0.417	1|1:1.401:0.077,0.444,0.479	1|1:1.316:0.098,0.487,0.414	1|1:2:0,0,1	1|0:1.131:0.189,0.491,0.32	0|1:1.201:0.154,0.492,0.355	1|1:1.551:0.031,0.386,0.582	1|1:1.497:0.07,0.364,0.567	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.41:0.058,0.473,0.468	1|1:1.074:0.212,0.501,0.286	0|1:1.143:0.191,0.475,0.334	1|1:1.975:0,0.024,0.975	1|1:1.727:0.027,0.22,0.753	1|1:1.39:0.092,0.426,0.482	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.246:0.136,0.482,0.382	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.347:0.089,0.474,0.437	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.216:0.788,0.209,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.236:0.151,0.462,0.387	0|0:0:1,0,0	1|1:1.968:0.001,0.03,0.969	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.019:0.002,0.977,0.021	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|1:1.018:0,0.982,0.018	0|1:1.021:0,0.979,0.021	1|0:1.016:0.002,0.981,0.018	1|0:1.02:0.001,0.978,0.021	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.179:0.167,0.486,0.347	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.034:0.231,0.504,0.265	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.944:0.002,0.053,0.946	1|1:1.747:0,0.253,0.747	0|0:0:1,0,0	1|1:1.87:0,0.129,0.87	0|1:1.539:0.007,0.447,0.546	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	1|1:1.918:0.003,0.076,0.921	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.969:0,0.031,0.969	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.356:0.082,0.479,0.439	1|0:1.247:0.137,0.479,0.384	0|0:0:1,0,0	1|1:1.42:0.074,0.433,0.494	1|1:1.709:0.016,0.259,0.725	1|1:1.173:0.169,0.49,0.342	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.467:0.062,0.408,0.529	0|0:0:1,0,0	1|1:1.566:0.08,0.274,0.646	0|1:1.132:0.188,0.492,0.32	0|0:0:1,0,0	0|1:1.222:0.145,0.488,0.367	1|1:1.614:0.028,0.33,0.642	1|1:1.736:0.031,0.203,0.766	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.327:0.134,0.406,0.46	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.458:0.059,0.424,0.517	1|1:2:0,0,1	0|1:1.128:0.176,0.521,0.304	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.696:0.021,0.261,0.718	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.42:0.068,0.444,0.488	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.57:0.062,0.307,0.632	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.153:0.18,0.488,0.333	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15323380	SNP-3.15322026.	A	G	.	PASS	AR2=0.971;DR2=0.981;AF=0.284	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.405:0.089,0.416,0.494	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.368:0.103,0.427,0.471	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.711:0.023,0.243,0.734	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.279:0.124,0.473,0.403	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.181:0.153,0.512,0.335	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.498:0.072,0.359,0.569	1|1:1.527:0.049,0.375,0.576	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.969:0,0.03,0.969	1|1:1.714:0.01,0.266,0.724	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.359:0.104,0.432,0.464	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15326858	SNP-3.15325504.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.373	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.933:0,0.066,0.933	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.961:0,0.039,0.961	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.979:0,0.021,0.979	0|0:0:1,0,0	1|1:2:0,0,1
+3	15326925	SNP-3.15325571.	C	A	.	PASS	AR2=0.948;DR2=0.963;AF=0.526	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.427:0.086,0.401,0.513	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.837:0.012,0.139,0.849	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.691:0.024,0.261,0.715	1|1:2:0,0,1	1|1:1.692:0.024,0.261,0.716	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.682:0.026,0.267,0.707	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.852:0.006,0.135,0.858	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.928:0.002,0.069,0.93	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.981:0,0.019,0.981	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:0.947:0.207,0.639,0.154	1|0:1:0,1,0	1|0:0.917:0.23,0.622,0.148	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1.536:0.055,0.354,0.591	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.579:0.048,0.325,0.627	0|0:0:1,0,0	1|1:1.989:0,0.011,0.989	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.308:0.118,0.456,0.426	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.535:0.058,0.348,0.594	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.621:0.041,0.298,0.662	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.686:0.023,0.269,0.708	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.917:0.001,0.081,0.918	1|1:2:0,0,1	1|1:1.675:0.026,0.273,0.701	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.735:0.017,0.231,0.752	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.458:0.076,0.39,0.534	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.694:0.023,0.259,0.717	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.689:0.024,0.262,0.714	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.501:0.03,0.44,0.531	0|1:1:0,1,0	1|0:1.432:0.082,0.404,0.514	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.937:0,0.063,0.937	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1.417:0.086,0.41,0.504	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.655:0.563,0.22,0.218	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	15327621	SNP-3.15326267.	C	A	.	PASS	AR2=0.987;DR2=0.99;AF=0.329	GT:DS:GP	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.407:0.629,0.336,0.036	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.136:0.867,0.13,0.003	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.513:0.553,0.381,0.066	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.335:0.69,0.286,0.025	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.069:0.932,0.068,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.303:0.715,0.266,0.019	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.157:0.849,0.145,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.15:0.856,0.139,0.006	0|0:0:1,0,0	0|0:0.151:0.853,0.143,0.004	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.081:0.921,0.077,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15327657	SNP-3.15326303.	A	G	.	PASS	AR2=0.985;DR2=0.99;AF=0.282	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.426:0.084,0.406,0.51	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.565:0.036,0.364,0.601	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.525:0.043,0.389,0.568	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:0.913:0.092,0.903,0.005	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.262:0.738,0.262,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.729:0.018,0.235,0.747	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.761:0.013,0.212,0.775	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15327752	SNP-3.15326398.	C	A	.	PASS	AR2=0.995;DR2=0.996;AF=0.263	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.744:0.021,0.215,0.765	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.712:0,0.287,0.712	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.803:0,0.197,0.803	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.827:0.011,0.151,0.838	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15328210	SNP-3.15326856.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.382	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.251:0.749,0.251,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15329206	SNP-3.15327852.	A	G	.	PASS	AR2=0.99;DR2=0.992;AF=0.367	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.794:0.004,0.197,0.799	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:0.975:0.025,0.975,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.708:0.02,0.252,0.728	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.949,0.051,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.045:0.955,0.045,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.951:0,0.048,0.951	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.131:0.87,0.128,0.001	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.902:0.002,0.095,0.904	1|1:1.73:0.02,0.23,0.75	1|1:1.722:0.02,0.239,0.742	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.814:0.004,0.179,0.818	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.916:0.002,0.08,0.918	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.963:0,0.036,0.963	1|1:1.912:0.002,0.084,0.914	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.834:0.006,0.153,0.84	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15329912	SNP-3.15328558.	A	G	.	PASS	AR2=0.987;DR2=0.989;AF=0.374	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.067:0.934,0.065,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.945,0.054,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.959,0.04,0.001	0|0:0:1,0,0	0|0:0.047:0.954,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.939:0.001,0.06,0.939	1|1:2:0,0,1	1|1:1.772:0.013,0.202,0.785	1|1:2:0,0,1	1|1:1.771:0.012,0.206,0.783	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.923:0,0.077,0.923	1|1:1.845:0.008,0.14,0.853	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.949:0.001,0.05,0.95	1|1:1.979:0,0.02,0.979	1|1:2:0,0,1	0|0:0.05:0.951,0.049,0.001	1|1:1.792:0.011,0.187,0.802	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.125:0.877,0.12,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.831:0.005,0.159,0.836	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.931:0.002,0.065,0.933	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.809:0.009,0.172,0.819	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.96:0,0.039,0.96	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.928:0.001,0.07,0.929	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.852:0.002,0.143,0.854	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.938,0.06,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.932:0.001,0.065,0.933	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.95:0.001,0.049,0.95	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.868:0.002,0.128,0.87	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.873:0.003,0.121,0.876	1|1:1.813:0.006,0.176,0.819	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.938:0.001,0.059,0.94
+3	15331834	SNP-3.15330480.	A	G	.	PASS	AR2=0.997;DR2=0.997;AF=0.39	GT:DS:GP	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.093:0.91,0.087,0.003	0|0:0.059:0.942,0.056,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0.042:0.958,0.041,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0.098:0.905,0.093,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.072:0.929,0.07,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.043:0.957,0.043,0	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.1:0.903,0.095,0.003	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.034,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15332489	SNP-3.15331135.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.289	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.045:0.955,0.044,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.286:0.719,0.276,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.469:0.542,0.448,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15333239	SNP-3.15331885.	A	G	.	PASS	AR2=0.965;DR2=0.973;AF=0.41	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.108:0.895,0.103,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.148:0.857,0.137,0.006	0|0:0.376:0.644,0.336,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.115:0.888,0.109,0.003	0|0:0.051:0.949,0.05,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.107:0.895,0.102,0.002	1|1:2:0,0,1	0|1:0.703:0.368,0.561,0.071	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.102:0.9,0.097,0.003	0|0:0.01:0.99,0.01,0	0|0:0.105:0.897,0.101,0.002	1|1:2:0,0,1	0|0:0.12:0.884,0.113,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.429:0.597,0.377,0.026	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.944:0.285,0.487,0.229	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	0|0:0.159:0.843,0.156,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.91:0.001,0.088,0.911	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.134:0.867,0.132,0.001	1|1:1.876:0.003,0.117,0.88	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.503:0.544,0.41,0.046	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.077:0.924,0.076,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	0|0:0.065:0.936,0.063,0.001	0|0:0.01:0.99,0.01,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.303:0.711,0.275,0.014	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.125:0.879,0.117,0.004	0|0:0.146:0.859,0.135,0.005	1|1:1.845:0.004,0.147,0.849	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.028:0.973,0.026,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.078:0.925,0.072,0.003	0|0:0:1,0,0	0|0:0.112:0.891,0.107,0.003	0|0:0.324:0.691,0.293,0.016	0|0:0.233:0.777,0.214,0.009	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.663:0.464,0.409,0.127	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.239:0.765,0.23,0.005	0|0:0:1,0,0	1|0:1.278:0.047,0.627,0.325	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.67:0.353,0.624,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.04:0.961,0.038,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.969:0,0.03,0.97	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|0:0.588:0.504,0.404,0.092	1|1:2:0,0,1	1|1:1.937:0.001,0.061,0.938	1|1:1.874:0.001,0.123,0.875	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15333774	SNP-3.15332420.	A	G	.	PASS	AR2=0.99;DR2=0.992;AF=0.331	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.812:0.008,0.172,0.82	1|1:1.877:0.006,0.112,0.882	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.922,0.075,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.432:0.574,0.42,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.304:0.722,0.251,0.027	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.034:0.967,0.032,0.001	0|0:0:1,0,0	0|0:0.128:0.873,0.125,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.855:0.005,0.135,0.86	1|1:1.835:0.007,0.151,0.842	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.89:0.003,0.104,0.893	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.884:0.003,0.11,0.887	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.904:0.003,0.09,0.907	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.043:0.958,0.042,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.906:0.002,0.09,0.908	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15333798	SNP-3.15332444.	C	A	.	PASS	AR2=0.936;DR2=0.956;AF=0.552	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.976:0,0.023,0.977	1|0:1.289:0.108,0.495,0.397	1|1:1.582:0.048,0.321,0.63	0|1:1.468:0.071,0.39,0.539	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.343:0.11,0.438,0.453	1|1:2:0,0,1	1|0:1.539:0.041,0.379,0.58	0|0:0:1,0,0	1|1:1.814:0.011,0.164,0.825	1|1:1.578:0.034,0.354,0.612	1|1:2:0,0,1	1|1:1.589:0.037,0.336,0.626	0|1:1.265:0.123,0.489,0.388	1|1:1.425:0.085,0.406,0.51	1|1:1.411:0.087,0.414,0.498	1|1:1.63:0.018,0.334,0.648	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0,0.021,0.978	1|1:1.672:0.018,0.292,0.69	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.889:0.004,0.103,0.893	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.48:0.067,0.386,0.547	0|0:0:1,0,0	1|1:1.954:0.002,0.043,0.955	0|0:0:1,0,0	1|1:1.676:0.023,0.279,0.699	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.978:0,0.021,0.979	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.96:0,0.04,0.96	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.959:0,0.041,0.959	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.171:0.182,0.464,0.354	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.354:0.061,0.523,0.416	1|1:1.624:0,0.376,0.624	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.976:0,0.023,0.976	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.719:0.005,0.27,0.724	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.978:0,0.021,0.979	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.982:0,0.017,0.983	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.793:0.017,0.172,0.81	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.501:0.061,0.378,0.562	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.453:0.074,0.398,0.528	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.43:0.084,0.403,0.513	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.77:0.009,0.212,0.779	1|1:2:0,0,1	0|0:0.069:0.931,0.068,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.588:0.035,0.342,0.623	1|1:1.479:0.068,0.386,0.547	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.575:0.038,0.349,0.613	1|1:1.332:0.111,0.447,0.442	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.037:0.964,0.036,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.609:0.026,0.339,0.635	1|1:1.974:0,0.026,0.974	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.665:0.043,0.249,0.708	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15333950	SNP-3.15332596.	A	G	.	PASS	AR2=0.988;DR2=0.99;AF=0.439	GT:DS:GP	0|0:0.337:0.688,0.287,0.025	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.932,0.067,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.15:0.854,0.141,0.005	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.166:0.839,0.156,0.005	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.252:0.765,0.219,0.017	0|0:0.147:0.856,0.14,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.187:0.822,0.17,0.009	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.054:0.946,0.054,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.959,0.041,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0.139:0.862,0.136,0.001	0|1:1:0,1,0	0|0:0.09:0.912,0.087,0.002	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0.113:0.891,0.105,0.004	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.177:0.83,0.162,0.007	0|0:0.179:0.826,0.17,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.075:0.927,0.071,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.073:0.929,0.07,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.085:0.916,0.082,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.056:0.945,0.055,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.059:0.942,0.057,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.248:0.756,0.241,0.003	0|0:0.121:0.882,0.114,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15335806	SNP-3.15334452.	A	G	.	PASS	AR2=0.993;DR2=0.994;AF=0.402	GT:DS:GP	0|0:0.013:0.987,0.013,0	1|1:1.939:0.002,0.058,0.941	1|1:1.922:0.002,0.075,0.923	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.975:0,0.024,0.975	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.902:0.001,0.095,0.904	1|1:2:0,0,1	1|1:1.918:0.002,0.078,0.92	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.945:0.001,0.053,0.946	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.941:0.001,0.057,0.942	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.963:0,0.036,0.964	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.865:0.004,0.126,0.869	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.954:0.001,0.045,0.954	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.943:0.001,0.055,0.944	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.661:0.004,0.331,0.665	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.964:0,0.035,0.964	1|1:1.953:0.001,0.046,0.953	1|1:2:0,0,1	1|1:1.941:0.001,0.057,0.942	1|1:1.939:0.001,0.059,0.94	1|1:1.942:0.001,0.056,0.943	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.942:0.001,0.057,0.943	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.945:0.001,0.054,0.945	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	1|1:1.981:0,0.019,0.981	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:1.957:0,0.043,0.957	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.966:0,0.033,0.966	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15335891	SNP-3.15334537.	C	A	.	PASS	AR2=0.966;DR2=0.975;AF=0.258	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.21:0.8,0.19,0.01	0|0:0:1,0,0	1|0:0.514:0.554,0.377,0.068	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.234:0.782,0.202,0.016	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.237:0.778,0.207,0.015	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.429:0.616,0.338,0.045	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.512:0.553,0.381,0.065	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.067:0.934,0.065,0.001	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.07:0.932,0.067,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.257:0.759,0.224,0.017	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.904:0.003,0.09,0.907	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.387:0.646,0.322,0.033	0|0:0.379:0.652,0.316,0.031	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.358:0.672,0.298,0.03	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.223:0.79,0.197,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.339:0.687,0.287,0.026	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.242:0.773,0.211,0.016	0|0:0:1,0,0	0|0:0.246:0.77,0.214,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.171:0.84,0.15,0.01	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	15336159	SNP-3.15334805.	A	G	.	PASS	AR2=0.995;DR2=0.996;AF=0.409	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.09:0.913,0.085,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.928:0.002,0.067,0.931	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.93:0,0.069,0.931	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.062:0.938,0.062,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.921:0.001,0.078,0.922	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.081:0.92,0.079,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.102:0.9,0.097,0.003	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.048:0.953,0.046,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.102:0.901,0.097,0.002	0|0:0:1,0,0	0|0:0.12:0.884,0.113,0.003	1|1:2:0,0,1	1|1:1.93:0,0.07,0.93	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.124:0.88,0.117,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1
+3	15336618	SNP-3.15335264.	A	G	.	PASS	AR2=1;DR2=1;AF=0.409	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15336996	SNP-3.15335642.	A	G	.	PASS	AR2=0.982;DR2=0.987;AF=0.342	GT:DS:GP	1|0:1.581:0.036,0.347,0.617	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.724:0.017,0.241,0.741	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.888:0.002,0.108,0.89	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.898:0.002,0.097,0.9	1|1:2:0,0,1	0|1:1.439:0.02,0.522,0.459	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1.341:0.034,0.591,0.375	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.113:0.887,0.113,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.949:0.001,0.048,0.951	1|1:1.738:0.013,0.236,0.751	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1.327:0.046,0.581,0.373	1|1:1.928:0.002,0.068,0.93	1|1:1.898:0.002,0.097,0.901	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.935:0.001,0.063,0.936	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0,0.025,0.975	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.814:0.006,0.174,0.82	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.937:0.001,0.061,0.938	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.312:0.043,0.602,0.355	1|1:2:0,0,1	1|1:1.922:0.001,0.076,0.923	0|0:0:1,0,0	1|1:2:0,0,1
+3	15337287	SNP-3.15335933.	A	G	.	PASS	AR2=0.989;DR2=0.991;AF=0.395	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.951,0.049,0.001	0|0:0.045:0.955,0.045,0	0|0:0:1,0,0	0|0:0.064:0.936,0.064,0	1|1:2:0,0,1	0|0:0.091:0.912,0.086,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.141:0.864,0.132,0.005	0|0:0:1,0,0	0|0:0.06:0.941,0.058,0.001	0|0:0.067:0.933,0.066,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.973,0.027,0.001	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0.146:0.859,0.135,0.006	0|0:0.035:0.965,0.034,0.001	0|0:0:1,0,0	0|0:0.028:0.972,0.027,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.162:0.843,0.151,0.005	1|1:1.998:0,0.002,0.998	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0.536:0.464,0.536,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.046:0.955,0.044,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.206:0.794,0.206,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.508:0.492,0.508,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.014:0.986,0.014,0	1|1:2:0,0,1	0|0:0.296:0.704,0.296,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.985,0.015,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.955,0.044,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.052:0.949,0.051,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.018:0.982,0.018,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15340437	SNP-3.15339083.	A	G	.	PASS	AR2=0.958;DR2=0.971;AF=0.283	GT:DS:GP	0|0:0.087:0.914,0.084,0.002	0|0:0.022:0.979,0.021,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.982,0.018,0	1|1:1.544:0.053,0.35,0.597	1|1:1.649:0.033,0.286,0.681	1|1:1.442:0.075,0.408,0.517	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.553:0.041,0.366,0.594	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1.382:0.104,0.41,0.486	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.147:0.172,0.508,0.32	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.239:0.143,0.475,0.382	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.514:0.056,0.375,0.569	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.978,0.022,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.741:0.026,0.208,0.767	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1.338:0.111,0.44,0.449	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.406:0.083,0.428,0.489	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.964:0,0.035,0.965	1|1:1.655:0.01,0.325,0.665	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.605:0.037,0.32,0.642	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15341253	SNP-3.15339899.	A	G	.	PASS	AR2=0.949;DR2=0.964;AF=0.283	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.768:0.012,0.207,0.78	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.372:0.087,0.455,0.459	1|1:1.641:0.032,0.296,0.673	1|1:2:0,0,1	1|1:1.592:0.042,0.325,0.634	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.419:0.063,0.454,0.482	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.653:0.023,0.3,0.677	0|1:1.454:0.043,0.46,0.497	1|1:2:0,0,1	1|0:1.152:0.128,0.592,0.28	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.869:0.004,0.124,0.872	1|0:1.52:0.046,0.387,0.566	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.817:0.009,0.165,0.826	1|1:2:0,0,1	1|1:1.396:0.077,0.45,0.473	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0.054:0.946,0.053,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.957,0.043,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0.014:0.986,0.014,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.5:0.063,0.374,0.563	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.966:0,0.034,0.966	1|0:1:0,1,0	1|1:1.976:0,0.024,0.976	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.299:0.071,0.559,0.37	0|0:0.018:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.751:0.016,0.218,0.766	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.403:0.073,0.451,0.476	0|0:0:1,0,0	1|1:1.782:0.005,0.208,0.787	1|1:1.869:0.007,0.116,0.877	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.479:0.052,0.416,0.532	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.793:0.008,0.191,0.801	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.872:0.006,0.116,0.878	1|1:1.561:0.028,0.382,0.589	1|1:2:0,0,1	1|1:1.873:0.006,0.114,0.88	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.854:0.007,0.132,0.861	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.714:0.017,0.252,0.731	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15341900	SNP-3.15340546.	A	G	.	PASS	AR2=1;DR2=1;AF=0.375	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.926:0.074,0.926,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15343206	SNP-3.15341852.	A	G	.	PASS	AR2=0.995;DR2=0.996;AF=0.364	GT:DS:GP	1|1:1.548:0.039,0.375,0.587	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.958:0.001,0.041,0.958	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.829:0.003,0.166,0.832	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.763:0.01,0.218,0.773	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15346607	SNP-3.15345253.	C	A	.	PASS	AR2=0.967;DR2=0.974;AF=0.252	GT:DS:GP	0|0:0:1,0,0	1|1:1.881:0.005,0.109,0.886	1|1:2:0,0,1	1|1:1.91:0.002,0.085,0.913	1|1:1.903:0.003,0.09,0.906	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.323:0.016,0.646,0.339	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.939:0.001,0.059,0.94	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0	0|0:0.047:0.953,0.047,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.129:0.874,0.124,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.943:0.001,0.055,0.944	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.508:0.599,0.294,0.107	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.893:0.004,0.1,0.897	1|1:2:0,0,1	1|1:1.975:0,0.025,0.975	0|0:0:1,0,0	1|1:1.895:0.003,0.098,0.899	1|1:2:0,0,1	1|1:1.455:0.096,0.352,0.551	1|1:1.772:0.008,0.213,0.78	0|0:0.262:0.741,0.256,0.003	0|0:0.037:0.963,0.036,0	0|0:0:1,0,0	1|1:1.972:0.001,0.027,0.972	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.929:0.003,0.065,0.932	0|0:0.035:0.965,0.035,0	1|1:1.796:0.01,0.185,0.805	1|1:1.875:0.003,0.119,0.878	1|1:1.453:0.066,0.415,0.519	0|0:0:1,0,0	1|1:1.971:0.001,0.028,0.971	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0.081:0.92,0.079,0.001	1|1:1.864:0.007,0.122,0.871	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.821:0.007,0.164,0.829	1|1:2:0,0,1	0|0:0.062:0.939,0.061,0.001	1|1:1.681:0.038,0.242,0.719	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.971,0.029,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.963,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.943,0.056,0.001	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0.036:0.964,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.973,0.027,0	0|0:0.038:0.962,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.713:0.016,0.255,0.729	0|0:0:1,0,0	1|1:1.915:0.003,0.079,0.918	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.082:0.919,0.079,0.001	0|0:0.027:0.973,0.027,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15347942	SNP-3.15346588.	A	G	.	PASS	AR2=0.994;DR2=0.995;AF=0.332	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.975:0,0.025,0.975	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.961:0.001,0.038,0.962	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.963:0.001,0.036,0.963	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.916:0.001,0.082,0.917	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.937:0.001,0.062,0.938	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:0.398:0.602,0.398,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.164:0.842,0.153,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.947:0.001,0.052,0.947	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.966:0,0.033,0.967	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.937:0.001,0.061,0.938	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.906:0.003,0.089,0.908	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.968:0,0.032,0.968	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.93:0.001,0.067,0.932	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.907:0.001,0.09,0.908	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15348159	SNP-3.15346805.	A	G	.	PASS	AR2=1;DR2=1;AF=0.377	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.012:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15349886	SNP-3.15348532.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.284	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.019,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.968,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15351072	SNP-3.15349718.	C	A	.	PASS	AR2=0.99;DR2=0.991;AF=0.28	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.747:0.017,0.22,0.764	0|0:0:1,0,0	1|1:1.928:0.002,0.067,0.93	1|1:1.802:0.009,0.179,0.811	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.875:0.004,0.117,0.879	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.863:0.005,0.126,0.868	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.883:0.003,0.111,0.886	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.773:0.004,0.219,0.777	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.928:0.001,0.069,0.929	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.969:0,0.031,0.969	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.036,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	1|1:1.888:0.004,0.105,0.892	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.959:0,0.04,0.96	0|0:0.202:0.798,0.201,0.001	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.801:0.01,0.179,0.811	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15352213	SNP-3.15350859.	A	G	.	PASS	AR2=0.996;DR2=0.997;AF=0.373	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.087:0.915,0.083,0.002	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.969:0,0.03,0.969	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.026,0.973	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.949:0,0.05,0.95	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.93:0.001,0.068,0.931	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.95:0.001,0.049,0.95	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.956:0,0.043,0.956	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.074:0.927,0.072,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.95:0.001,0.049,0.95	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.924:0.001,0.073,0.925	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.954,0.045,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.959:0.001,0.039,0.96	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.956:0.001,0.043,0.956	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.027:0.974,0.026,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.966:0,0.034,0.966	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.96,0.04,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15353046	SNP-3.15351692.	C	A	.	PASS	AR2=0.996;DR2=0.996;AF=0.311	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.169:0.837,0.157,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.938,0.06,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.053:0.947,0.053,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.174:0.83,0.165,0.005	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.03:0.97,0.03,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.114:0.889,0.109,0.003	0|0:0.121:0.883,0.113,0.004	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.093:0.915,0.078,0.008	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	15355248	SNP-3.15353894.	A	G	.	PASS	AR2=1;DR2=1;AF=0.337	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.965:0,0.034,0.965	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15355846	SNP-3.15354492.	A	G	.	PASS	AR2=0.987;DR2=0.988;AF=0.33	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0.017:0.983,0.016,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.895:0.003,0.1,0.897	1|1:2:0,0,1	1|1:1.87:0.005,0.12,0.875	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.891:0.003,0.103,0.894	1|1:1.899:0.002,0.097,0.901	1|1:2:0,0,1	1|1:1.902:0.002,0.094,0.904	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.916:0.001,0.083,0.917	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.921:0.002,0.076,0.923	1|1:1.915:0.002,0.081,0.917	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.957:0.001,0.042,0.958	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.895:0.003,0.099,0.898	1|1:1.915:0.001,0.082,0.917	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.856:0.004,0.135,0.861	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.957,0.043,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.919:0.002,0.078,0.92	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.993:0.007,0.993,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.791:0.003,0.203,0.794	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.916:0.001,0.081,0.917	1|1:2:0,0,1	1|1:1.947:0.001,0.052,0.947	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.978:0,0.021,0.978	1|1:2:0,0,1	1|1:1.877:0.003,0.116,0.881	1|1:2:0,0,1	1|1:1.883:0.003,0.112,0.885	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.921:0.002,0.075,0.923	1|1:1.907:0.002,0.089,0.909	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.88:0.003,0.113,0.883	1|1:1.798:0.009,0.184,0.807	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.896:0.003,0.099,0.898	1|1:1.917:0.001,0.081,0.918	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.929:0.001,0.07,0.929	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:1.949:0.001,0.049,0.95	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.952:0.001,0.046,0.953	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15357818	SNP-3.15356464.	C	A	.	PASS	AR2=0.985;DR2=0.987;AF=0.291	GT:DS:GP	0|0:0:1,0,0	1|1:1.857:0.004,0.135,0.861	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.109:0.893,0.106,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.347:0.7,0.253,0.047	0|1:1.148:0.002,0.849,0.149	0|0:0.257:0.783,0.177,0.04	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.112:0.891,0.106,0.003	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.101:0.904,0.092,0.005	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.768:0.008,0.216,0.776	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1.142:0.232,0.394,0.374	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.078:0.923,0.076,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.044:0.957,0.041,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0.035:0.965,0.035,0	0|0:0.036:0.966,0.033,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.964,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.97,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.042:0.959,0.04,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.032:0.969,0.031,0	0|0:0:1,0,0	0|0:0.144:0.86,0.136,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15358532	SNP-3.15357178.	A	G	.	PASS	AR2=0.968;DR2=0.974;AF=0.303	GT:DS:GP	0|0:0.006:0.994,0.006,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.778:0,0.221,0.778	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.679:0.022,0.278,0.7	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.717:0.021,0.24,0.738	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.763:0.011,0.216,0.774	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.188:0.167,0.479,0.355	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.849:0,0.151,0.849	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.642:0.006,0.346,0.648	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	0|0:0:1,0,0	1|0:1.556:0.008,0.428,0.564	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.717:0.021,0.24,0.738	1|1:2:0,0,1	1|1:1.703:0.02,0.258,0.723	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.788:0.016,0.181,0.803	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.837:0.005,0.153,0.842	1|1:1.657:0.027,0.289,0.684	1|1:1.692:0.039,0.231,0.73	1|0:1:0,1,0	1|1:1.852:0.008,0.132,0.86	0|1:1.255:0.144,0.456,0.399	1|1:2:0,0,1	1|1:1.913:0.003,0.081,0.916	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.015:0.985,0.015,0	1|1:1.556:0.022,0.4,0.578	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.687:0.025,0.264,0.712	0|0:0.021:0.979,0.021,0	0|0:0.016:0.984,0.016,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.881:0.003,0.114,0.883	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.96:0,0.039,0.96	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15361028	SNP-3.15359674.	A	G	.	PASS	AR2=0.975;DR2=0.977;AF=0.237	GT:DS:GP	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.83:0.004,0.163,0.833	1|1:1.933:0.001,0.065,0.934	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.948,0.052,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.969:0.274,0.483,0.243	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.074:0.22,0.486,0.294	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.401:0.626,0.348,0.027	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.033:0.243,0.481,0.276	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.935,0.065,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1.04:0.234,0.492,0.274	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.957,0.043,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.941:0.001,0.058,0.942	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.048:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.079:0.214,0.492,0.293	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:1.033:0.243,0.481,0.276	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15361971	SNP-3.15360617.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.235	GT:DS:GP	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.063:0.938,0.062,0.001	1|0:1:0,1,0	0|0:0.123:0.879,0.118,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.126:0.878,0.118,0.004	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.319:0.694,0.293,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.022:0.978,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.117:0.885,0.113,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.953,0.046,0.001	0|0:0.065:0.936,0.063,0.001	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15363498	SNP-3.15362144.	C	A	.	PASS	AR2=0.981;DR2=0.985;AF=0.274	GT:DS:GP	0|0:0:1,0,0	1|0:1.485:0.067,0.381,0.552	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.125:0.879,0.117,0.004	0|0:0:1,0,0	0|0:0.088:0.914,0.084,0.002	0|0:0:1,0,0	0|0:0.116:0.887,0.11,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.947,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.932,0.065,0.002	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.049:0.212,0.527,0.261	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.771:0.012,0.205,0.783	1|1:1.767:0.015,0.203,0.782	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.649:0.031,0.288,0.681	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.877:0.006,0.111,0.883	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.155:0.852,0.142,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.937,0.062,0.001	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.134:0.87,0.125,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.94,0.059,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.124:0.879,0.118,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.174:0.835,0.156,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15366115	SNP-3.15364761.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.207	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.307:0.696,0.302,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.057:0.944,0.055,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.049:0.952,0.047,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.111:0.893,0.104,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15366187	SNP-3.15364833.	A	G	.	PASS	AR2=0.997;DR2=0.998;AF=0.39	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.29:0.715,0.279,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.108:0.896,0.101,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.062:0.939,0.06,0.001	0|0:0:1,0,0	0|0:0.09:0.912,0.086,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.955,0.044,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.937,0.061,0.002	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15367078	SNP-3.15365724.	C	A	.	PASS	AR2=0.911;DR2=0.93;AF=0.511	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.863:0,0.137,0.863	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.788:0.368,0.477,0.156	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.512:0.013,0.461,0.525	0|1:1.171:0.158,0.514,0.328	1|1:2:0,0,1	1|0:1.015:0.243,0.5,0.257	0|1:0.788:0.368,0.477,0.156	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.032:0.232,0.503,0.265	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.835:0.339,0.488,0.174	0|1:1.006:0.248,0.497,0.255	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.394:0.092,0.422,0.486	0|1:0.793:0.365,0.478,0.158	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1.074:0.221,0.484,0.295	0|0:0.702:0.421,0.456,0.123	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.01:0.99,0.01,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.265:0.028,0.68,0.293	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.842:0.007,0.145,0.849	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.886:0.119,0.877,0.005	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.019:0,0.981,0.019	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.79:0.005,0.201,0.795	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.494:0.062,0.383,0.556	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1.143:0.182,0.493,0.325	1|0:0.792:0.365,0.477,0.157	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.388:0.093,0.427,0.481	1|1:2:0,0,1	1|0:1.067:0.213,0.507,0.28	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.691:0.425,0.459,0.116	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.926:0.288,0.498,0.214	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:0.79:0.366,0.477,0.157	1|1:2:0,0,1	1|1:1.675:0.024,0.276,0.7	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.037:0.227,0.509,0.264	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:0.825:0.344,0.487,0.169	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.357:0.105,0.433,0.462	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.357:0.105,0.433,0.462	1|0:1.371:0.099,0.431,0.47	1|0:1:0,1,0	0|1:1.384:0.094,0.428,0.478	1|1:1.389:0.093,0.426,0.481	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.534:0.063,0.341,0.596	0|1:1:0,1,0	1|1:1.372:0.099,0.43,0.471	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.522:0.063,0.352,0.585	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.777:0.374,0.474,0.152	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15368555	SNP-3.15367201.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.38	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.884:0.004,0.109,0.887	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.836:0.007,0.151,0.842	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.903:0.001,0.095,0.904	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.948:0.002,0.048,0.95	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15369388	SNP-3.15368034.	A	G	.	PASS	AR2=1;DR2=1;AF=0.202	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15369587	SNP-3.15368233.	C	A	.	PASS	AR2=0.919;DR2=0.937;AF=0.368	GT:DS:GP	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.053:0.947,0.053,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.276:0.126,0.472,0.402	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.576:0.468,0.488,0.044	0|1:0.773:0.358,0.511,0.131	0|0:0:1,0,0	0|0:0.738:0.397,0.468,0.135	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.803:0.348,0.501,0.151	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.675:0.464,0.397,0.139	1|1:2:0,0,1	0|0:0.061:0.94,0.059,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.276:0.207,0.31,0.483	0|0:0:1,0,0	0|0:0.921:0.359,0.361,0.28	0|0:0:1,0,0	1|0:1.088:0.191,0.531,0.279	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.573:0.041,0.344,0.615	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.259:0.784,0.174,0.042	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.746:0.255,0.744,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.495:0.056,0.394,0.551	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:1.485:0.058,0.4,0.542	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.619:0.032,0.317,0.651	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.622:0.033,0.312,0.655	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.603:0.051,0.296,0.654	0|1:0.9:0.278,0.545,0.178	1|1:1.124:0.174,0.528,0.298	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.205:0.821,0.153,0.026	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.912:0.25,0.589,0.161	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.481:0.072,0.376,0.552	0|0:0:1,0,0	0|1:1.022:0.207,0.564,0.229	0|0:0.381:0.642,0.336,0.023	1|1:1.812:0.003,0.182,0.815	0|0:0:1,0,0	0|0:0.464:0.596,0.344,0.06	0|0:0:1,0,0	0|1:1.218:0.138,0.506,0.356	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.201:0.148,0.503,0.349	0|1:0.84:0.272,0.616,0.112	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.916:0.248,0.587,0.164	1|0:0.839:0.318,0.525,0.157	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.167:0.067,0.699,0.234	1|1:2:0,0,1	1|1:1.728:0.025,0.223,0.753	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.42:0.083,0.414,0.503	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.773:0.031,0.165,0.804	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.57:0.006,0.419,0.575	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.447:0.083,0.387,0.53	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15369786	SNP-3.15368432.	A	G	.	PASS	AR2=0.98;DR2=0.985;AF=0.303	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.582:0.044,0.329,0.627	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.823:0.011,0.155,0.834	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.883:0.002,0.113,0.885	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.191:0.82,0.17,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.619:0.036,0.309,0.655	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.837:0.008,0.147,0.845	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.624:0.035,0.307,0.658	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.705:0.024,0.246,0.73	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.879:0.004,0.113,0.883	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.803:0.014,0.17,0.817	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.777:0.015,0.192,0.792	1|1:2:0,0,1	1|1:1.816:0.011,0.162,0.827	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.806:0.013,0.168,0.819	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.961:0.001,0.037,0.962	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.605:0.039,0.317,0.644	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15370592	SNP-3.15369238.	A	G	.	PASS	AR2=0.807;DR2=0.858;AF=0.205	GT:DS:GP	1|0:0.627:0.472,0.429,0.099	0|0:0:1,0,0	0|0:0.326:0.697,0.279,0.024	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.374:0.65,0.325,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.447:0.603,0.346,0.051	0|0:0:1,0,0	0|0:0.105:0.896,0.102,0.001	0|0:0:1,0,0	0|0:0.498:0.566,0.371,0.063	1|0:0.524:0.546,0.385,0.07	0|0:0.191:0.817,0.174,0.009	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.246:0.782,0.189,0.029	0|0:0.241:0.771,0.218,0.012	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.586:0.504,0.405,0.09	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.109:0.202,0.486,0.312	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.446:0.593,0.367,0.039	0|0:0.219:0.791,0.2,0.01	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.597:0.489,0.425,0.086	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.42:0.625,0.331,0.045	0|0:0:1,0,0	1|0:0.453:0.581,0.385,0.034	0|0:0:1,0,0	0|0:0.081:0.919,0.081,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.713:0.404,0.478,0.118	0|0:0.115:0.889,0.107,0.004	1|0:0.47:0.576,0.379,0.045	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.106:0.898,0.097,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.295:0.73,0.245,0.025	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.808:0.331,0.531,0.138	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.215:0.8,0.185,0.015	0|1:0.571:0.501,0.427,0.072	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.549:0.527,0.398,0.075	0|0:0.146:0.862,0.13,0.008	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.152:0.852,0.144,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.42:0.628,0.323,0.049	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.87:0.278,0.574,0.148	0|0:0:1,0,0	0|0:0.124:0.884,0.108,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.243:0.766,0.224,0.01	0|0:0:1,0,0	0|0:0.41:0.632,0.325,0.043	0|0:0.458:0.571,0.4,0.029	0|1:0.516:0.551,0.382,0.067	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.626:0.037,0.3,0.663	0|0:0.524:0.541,0.395,0.065	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.255:0.753,0.239,0.008	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.663:0.448,0.442,0.11	0|0:0:1,0,0	0|0:0.469:0.585,0.361,0.054	0|0:0.411:0.628,0.332,0.04	0|0:0.493:0.567,0.373,0.06	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.448:0.591,0.369,0.039	0|1:0.77:0.388,0.454,0.158	0|0:0.304:0.718,0.261,0.021	1|0:0.735:0.403,0.458,0.139	1|1:2:0,0,1	0|0:0.468:0.581,0.37,0.049	0|0:0.108:0.896,0.099,0.005	0|0:0:1,0,0	0|0:0.161:0.844,0.152,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.074:0.928,0.07,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.544:0.529,0.399,0.072	0|0:0.311:0.719,0.251,0.03	0|0:0.406:0.631,0.331,0.037	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.204:0.804,0.188,0.008	0|0:0.513:0.55,0.387,0.063	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.509:0.557,0.378,0.066	0|0:0.227:0.782,0.209,0.009	0|0:0.545:0.526,0.404,0.071	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.372:0.651,0.325,0.023	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.376:0.643,0.339,0.018	0|0:0:1,0,0	0|0:0.355:0.678,0.288,0.033	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.349:0.688,0.275,0.037	0|0:0.235:0.783,0.199,0.018	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.089:0.912,0.086,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.224:0.799,0.178,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.943,0.055,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.276:0.738,0.247,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.122:0.883,0.113,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.225:0.787,0.2,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.561:0.507,0.425,0.068	1|0:0.902:0.329,0.439,0.231	0|0:0:1,0,0
+3	15370686	SNP-3.15369332.	A	G	.	PASS	AR2=1;DR2=1;AF=0.368	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.012,0.988	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15370768	SNP-3.15369414.	A	G	.	PASS	AR2=0.991;DR2=0.992;AF=0.347	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.874:0.005,0.117,0.878	1|1:1.856:0.003,0.137,0.86	1|1:2:0,0,1	1|1:1.884:0.004,0.107,0.888	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.966:0,0.033,0.967	1|1:2:0,0,1	1|1:1.971:0.001,0.027,0.972	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.981:0,0.018,0.982	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.123:0.882,0.113,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.8:0.029,0.143,0.829	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.908:0.002,0.087,0.911	1|1:1.858:0.005,0.132,0.863	1|1:1.966:0.001,0.033,0.967	1|1:2:0,0,1	1|1:1.975:0.001,0.024,0.976	1|1:1.89:0.003,0.105,0.892	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.889:0.003,0.105,0.892	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.884:0.004,0.108,0.888	1|1:1.766:0.002,0.23,0.768	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.949:0.001,0.048,0.951	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.97:0,0.029,0.97	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15371351	SNP-3.15369997.	A	G	.	PASS	AR2=0.982;DR2=0.984;AF=0.326	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.816:0.012,0.159,0.829	1|1:2:0,0,1	1|1:1.865:0,0.135,0.865	1|1:1.811:0.009,0.17,0.821	1|1:1.845:0.007,0.142,0.851	0|0:0:1,0,0	1|1:1.856:0.006,0.132,0.862	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.854:0.006,0.135,0.859	1|1:1.9:0.004,0.092,0.904	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.862:0.006,0.127,0.867	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.839:0.011,0.138,0.85	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.872:0.007,0.115,0.879	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.785:0.012,0.192,0.797	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.91:0.002,0.086,0.912	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.616:0.039,0.306,0.655	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.661:0.02,0.3,0.681	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.882:0.004,0.11,0.886	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.971:0,0.028,0.972	1|1:1.839:0.006,0.148,0.846	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.839:0.006,0.148,0.846	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.877:0.004,0.115,0.881	1|1:1.855:0.006,0.134,0.86	1|0:1:0,1,0	1|1:1.853:0.006,0.136,0.858	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.774:0.013,0.199,0.788	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15372006	SNP-3.15370652.	C	A	.	PASS	AR2=0.995;DR2=0.995;AF=0.212	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.957,0.041,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.123:0.881,0.115,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.163:0.846,0.146,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.112:0.891,0.106,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.12:0.883,0.114,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.158:0.849,0.145,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.959,0.04,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15373779	SNP-3.15372425.	A	G	.	PASS	AR2=1;DR2=1;AF=0.224	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15377035	SNP-3.15375681.	A	G	.	PASS	AR2=0.993;DR2=0.994;AF=0.466	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|0:1:0,1,0	0|0:0.068:0.934,0.065,0.001	1|0:1:0,1,0	0|0:0.073:0.928,0.07,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.09:0.912,0.086,0.002	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.071:0.93,0.068,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.932,0.067,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.081:0.92,0.078,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1.497:0.029,0.444,0.526	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.96:0,0.04,0.96	1|1:1.992:0,0.008,0.992	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.967:0,0.033,0.967	1|1:1.961:0,0.038,0.961	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.06:0.94,0.059,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:1.955:0,0.045,0.955	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.808:0,0.192,0.808	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.983:0.055,0.908,0.037	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.979:0,0.021,0.979	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.984:0,0.015,0.985	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.98:0,0.02,0.98	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.926:0.002,0.069,0.929	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.939,0.06,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.949:0,0.051,0.949	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15378020	SNP-3.15376666.	C	A	.	PASS	AR2=0.989;DR2=0.991;AF=0.199	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.151:0.857,0.136,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.171:0.837,0.155,0.008	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.137:0.869,0.125,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.178:0.831,0.159,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.923:0.001,0.074,0.924	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.127:0.877,0.119,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.27:0.739,0.251,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.154:0.852,0.142,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.067:0.935,0.064,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.181:0.828,0.162,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	15379589	SNP-3.15378235.	C	A	.	PASS	AR2=0.975;DR2=0.981;AF=0.229	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.338:0.691,0.28,0.029	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.31:0.716,0.259,0.026	0|0:0:1,0,0	0|0:0.322:0.704,0.27,0.026	0|0:0:1,0,0	0|0:0.34:0.689,0.283,0.029	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.209:0.802,0.188,0.011	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.103:0.9,0.098,0.003	1|0:0.33:0.697,0.276,0.027	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.115:0.888,0.108,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.945,0.052,0.002	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.317:0.708,0.266,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.352:0.68,0.287,0.032	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.226:0.791,0.192,0.017	0|0:0.341:0.689,0.282,0.03	0|0:0:1,0,0	0|0:0.232:0.782,0.204,0.014	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15379816	SNP-3.15378462.	C	A	.	PASS	AR2=1;DR2=1;AF=0.282	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15379991	SNP-3.15378637.	A	G	.	PASS	AR2=0.987;DR2=0.989;AF=0.239	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.11:0.895,0.101,0.005	0|0:0.085:0.918,0.079,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.051:0.95,0.049,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.224:0.789,0.199,0.012	0|0:0.245:0.769,0.218,0.013	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0.23:0.784,0.203,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.141:0.863,0.133,0.004	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.268:0.748,0.237,0.016	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.95,0.049,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.056:0.945,0.054,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.942,0.057,0.001	0|0:0.25:0.768,0.214,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.177:0.832,0.158,0.009	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	15382697	SNP-3.15381343.	C	A	.	PASS	AR2=0.897;DR2=0.925;AF=0.288	GT:DS:GP	0|0:0:1,0,0	1|1:1.345:0.127,0.4,0.473	0|0:0.484:0.552,0.412,0.036	0|0:0.762:0.407,0.425,0.169	0|1:0.775:0.396,0.432,0.172	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.943,0.055,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.487:0.04,0.433,0.527	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.929,0.07,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.132:0.221,0.425,0.353	0|1:1.141:0.194,0.472,0.335	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.359:0.015,0.611,0.374	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.097:0.191,0.522,0.287	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.855:0.013,0.12,0.868	1|1:1.706:0.028,0.239,0.733	0|1:1.371:0.08,0.469,0.451	1|1:2:0,0,1	1|1:1.387:0.097,0.419,0.484	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.491:0.593,0.323,0.084	1|0:1.295:0.123,0.459,0.418	0|1:1.3:0.126,0.448,0.426	0|0:0:1,0,0	1|1:1.939:0.001,0.06,0.939	1|1:2:0,0,1	1|1:1.754:0.003,0.24,0.757	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.562:0.034,0.37,0.596	1|1:1.338:0.11,0.442,0.448	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.979:0,0.021,0.979	0|0:0:1,0,0	1|0:1.255:0.136,0.473,0.391	0|0:0.605:0.479,0.436,0.084	1|1:1.369:0.09,0.451,0.459	1|0:0.969:0.217,0.596,0.186	0|1:1.307:0.121,0.452,0.428	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.777:0.335,0.552,0.112	0|0:0:1,0,0	1|0:1.09:0.162,0.585,0.253	1|1:1.545:0.061,0.334,0.605	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.714:0,0.285,0.715	0|0:0:1,0,0	0|1:1.366:0.108,0.418,0.474	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.031:0.97,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.765:0.017,0.201,0.782	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.346:0.115,0.425,0.46	0|0:0.092:0.91,0.089,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.578:0.04,0.342,0.618	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.332:0.708,0.251,0.041	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.492:0.067,0.374,0.559	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.744:0.294,0.668,0.038	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.416:0.09,0.404,0.506	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.435:0.072,0.421,0.507	0|0:0:1,0,0
+3	15384795	SNP-3.15383441.	C	A	.	PASS	AR2=0.997;DR2=0.997;AF=0.403	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.834:0.009,0.149,0.842	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.285:0.744,0.228,0.029	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.037:0.964,0.035,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.045:0.956,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.852:0.154,0.839,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0
+3	15386720	SNP-3.15385366.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.399	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.941:0.003,0.054,0.943	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.94:0.002,0.057,0.941	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0
+3	15387032	SNP-3.15385678.	C	A	.	PASS	AR2=0.997;DR2=0.997;AF=0.412	GT:DS:GP	0|0:0.031:0.97,0.03,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.96:0.001,0.039,0.96	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.161:0.846,0.148,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.037:0.964,0.036,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.16:0.846,0.147,0.006	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.138:0.867,0.129,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.951:0.001,0.048,0.951	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.112:0.89,0.107,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0
+3	15388007	SNP-3.15386653.	C	A	.	PASS	AR2=0.986;DR2=0.989;AF=0.424	GT:DS:GP	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.218:0.794,0.193,0.012	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0.258:0.759,0.225,0.017	1|0:1:0,1,0	0|0:0.252:0.764,0.22,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.255:0.761,0.222,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.036,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.217:0.795,0.194,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.247:0.768,0.217,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.229:0.784,0.203,0.013	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.251:0.764,0.22,0.016	0|0:0:1,0,0	0|0:0.229:0.784,0.203,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.422:0.616,0.347,0.038	0|0:0:1,0,0	0|0:0.194:0.815,0.175,0.009	0|0:0:1,0,0	0|0:0.183:0.825,0.167,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0
+3	15388697	SNP-3.15387343.	A	G	.	PASS	AR2=1;DR2=1;AF=0.259	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.974:0,0.025,0.974	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.974:0,0.025,0.974	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15389271	SNP-3.15387917.	A	G	.	PASS	AR2=0.982;DR2=0.984;AF=0.243	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.142:0.864,0.131,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.176:0.832,0.16,0.008	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.176:0.832,0.16,0.008	0|0:0.176:0.832,0.16,0.008	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.147:0.859,0.136,0.006	0|0:0.176:0.832,0.16,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.161:0.846,0.148,0.007	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.15:0.856,0.139,0.006	0|0:0.168:0.839,0.154,0.007	0|0:0.157:0.849,0.145,0.006	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.173:0.834,0.158,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.162:0.844,0.149,0.007	0|0:0.176:0.832,0.16,0.008	0|1:1:0,1,0	0|0:0.161:0.846,0.148,0.007	0|0:0.152:0.854,0.141,0.006	0|0:0.18:0.828,0.164,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.173:0.834,0.158,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.165:0.842,0.151,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	15389524	SNP-3.15388170.	A	G	.	PASS	AR2=0.991;DR2=0.992;AF=0.285	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.123:0.877,0.123,0	0|0:0.239:0.776,0.21,0.014	1|1:2:0,0,1	0|0:0.057:0.944,0.054,0.001	0|0:0:1,0,0	0|0:0.242:0.773,0.213,0.015	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.156:0.848,0.148,0.004	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.254:0.763,0.221,0.016	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.223:0.79,0.197,0.013	0|0:0.187:0.824,0.166,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.205:0.805,0.185,0.01	1|1:2:0,0,1
+3	15389626	SNP-3.15388272.	A	G	.	PASS	AR2=1;DR2=1;AF=0.344	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.936:0.064,0.936,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15390114	SNP-3.15388760.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.388	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.162:0.842,0.154,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.079:0.922,0.076,0.001	0|0:0.024:0.976,0.024,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15393029	SNP-3.15391675.	A	G	.	PASS	AR2=1;DR2=1;AF=0.276	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15395475	SNP-3.15394121.	A	G	.	PASS	AR2=1;DR2=1;AF=0.208	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15399098	SNP-3.15397744.	A	G	.	PASS	AR2=0.874;DR2=0.916;AF=0.307	GT:DS:GP	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.752:0.41,0.429,0.162	0|0:0.497:0.561,0.382,0.057	1|1:2:0,0,1	0|1:0.66:0.451,0.439,0.11	0|1:1:0,1,0	0|0:0.662:0.45,0.437,0.113	0|0:0.171:0.834,0.162,0.005	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.572:0.511,0.406,0.083	0|0:0:1,0,0	0|0:0.581:0.504,0.411,0.085	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:0.723:0.392,0.492,0.115	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:0.592:0.485,0.438,0.077	1|0:1.563:0,0.437,0.563	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.698:0.408,0.485,0.107	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:0.619:0.479,0.424,0.097	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.625:0.467,0.442,0.092	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.586:0.501,0.413,0.087	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.265:0.743,0.25,0.007	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0.227:0.776,0.221,0.003	0|0:0:1,0,0	1|1:1.586:0,0.414,0.586	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.098:0,0.902,0.098	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:0.644:0.464,0.428,0.108	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.528:0.536,0.399,0.064	1|0:1:0,1,0	1|0:0.763:0.366,0.504,0.129	0|0:0.253:0.764,0.218,0.018	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.165:0.842,0.15,0.007	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.727:0.33,0.614,0.057	1|1:2:0,0,1	0|0:0.126:0.878,0.118,0.004	0|0:0.466:0.582,0.37,0.048	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.641:0.464,0.432,0.104	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.634:0.463,0.44,0.097	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.444:0.611,0.333,0.055	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.174:0.826,0.174,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.584:0.503,0.41,0.087	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.314:0.705,0.276,0.019	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.273:0.746,0.235,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.441:0.614,0.331,0.055	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.788:0.37,0.471,0.158	1|0:1:0,1,0	0|0:0.339:0.692,0.277,0.031	1|0:1:0,1,0	0|0:0:1,0,0
+3	15401934	SNP-3.15400580.	A	G	.	PASS	AR2=1;DR2=1;AF=0.274	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15402454	SNP-3.15401100.	C	A	.	PASS	AR2=1;DR2=1;AF=0.375	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15402840	SNP-3.15401486.	A	G	.	PASS	AR2=1;DR2=1;AF=0.414	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15407650	SNP-3.15406296.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.234	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.952,0.047,0.001	1|1:2:0,0,1	0|0:0.054:0.947,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.038:0.962,0.038,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	15407820	SNP-3.15406466.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.269	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.909:0.091,0.909,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.161:0.839,0.161,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15410098	SNP-3.15408744.	A	G	.	PASS	AR2=0.944;DR2=0.957;AF=0.333	GT:DS:GP	1|1:2:0,0,1	1|0:0.948:0.221,0.611,0.168	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:0.925:0.25,0.575,0.175	0|0:0.474:0.577,0.373,0.051	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.428:0.619,0.335,0.046	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.407:0.647,0.3,0.053	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.999:0.001,0.999,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.503:0.571,0.354,0.075	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.42:0.628,0.323,0.049	0|0:0:1,0,0	0|0:0.392:0.654,0.299,0.047	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.537:0.538,0.388,0.075	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.161:0.839,0.161,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.425:0.621,0.334,0.045	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.807:0.335,0.523,0.142	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:0.962:0.257,0.523,0.22	1|1:2:0,0,1	0|1:0.922:0.235,0.609,0.157	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.982:0.217,0.583,0.199	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.939:0.259,0.542,0.199	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:0.988:0.213,0.587,0.2	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.431:0.617,0.336,0.048	1|0:0.431:0.617,0.335,0.048	1|1:2:0,0,1	0|0:0.431:0.617,0.335,0.048	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.299:0.73,0.241,0.029	0|0:0.415:0.628,0.328,0.043	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.408:0.63,0.331,0.038	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.487:0.554,0.404,0.042	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15417237	SNP-3.15415883.	A	G	.	PASS	AR2=0.99;DR2=0.992;AF=0.242	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.202:0.808,0.183,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.933,0.065,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.151:0.852,0.145,0.003	1|0:1.047:0,0.953,0.047	0|0:0.1:0.903,0.094,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.471:0.57,0.389,0.041	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.187:0.817,0.178,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.166:0.841,0.152,0.007	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.179:0.827,0.168,0.006	0|0:0.052:0.949,0.05,0.001	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15420573	SNP-3.15419219.	A	G	.	PASS	AR2=0.987;DR2=0.99;AF=0.25	GT:DS:GP	1|1:1.804:0.013,0.171,0.816	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.456:0.052,0.44,0.508	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.855:0.005,0.136,0.859	1|1:1.671:0.014,0.301,0.685	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.803:0.008,0.181,0.811	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.817:0.007,0.169,0.824	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.833:0.006,0.154,0.839	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.861:0.004,0.131,0.865	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.789:0.012,0.187,0.801	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.86:0.006,0.129,0.865	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15423622	SNP-3.15422268.	A	G	.	PASS	AR2=1;DR2=1;AF=0.352	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	15426783	SNP-3.15425429.	A	G	.	PASS	AR2=1;DR2=1;AF=0.42	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.098:0.909,0.084,0.007	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15428351	SNP-3.15426997.	C	A	.	PASS	AR2=0.978;DR2=0.979;AF=0.411	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.785:0.36,0.496,0.145	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.976:0,0.024,0.976	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:1.993:0,0.007,0.993	1|1:1.717:0,0.283,0.717	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.744:0.388,0.48,0.132	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.925:0.293,0.489,0.218	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.959,0.041,0	0|0:0:1,0,0	0|1:0.919:0.296,0.488,0.215	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.002:0.998,0.002,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.781:0.362,0.494,0.143	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:0.912:0.297,0.493,0.209	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.809:0.359,0.472,0.169	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.909:0.299,0.493,0.208	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.95:0.278,0.494,0.228	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15429024	SNP-3.15427670.	C	A	.	PASS	AR2=0.995;DR2=0.997;AF=0.485	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.987:0,0.013,0.987	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.793:0.019,0.17,0.811	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.906:0.094,0.905,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.38:0.087,0.446,0.467	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15431066	SNP-3.15429712.	A	G	.	PASS	AR2=1;DR2=1;AF=0.344	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	15432664	SNP-3.15431310.	C	A	.	PASS	AR2=1;DR2=1;AF=0.364	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15433832	SNP-3.15432478.	A	G	.	PASS	AR2=1;DR2=1;AF=0.206	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.984:0,0.016,0.984	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	15434604	SNP-3.15433250.	C	A	.	PASS	AR2=0.997;DR2=0.997;AF=0.377	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.584:0.43,0.556,0.014	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.102:0.901,0.096,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.94,0.06,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.147:0.861,0.132,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15437886	SNP-3.15436532.	A	G	.	PASS	AR2=0.995;DR2=0.995;AF=0.262	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.991:0.04,0.929,0.031	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.032:0.968,0.032,0	0|0:0:1,0,0	0|0:0.029:0.972,0.028,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.04:0.022,0.916,0.062	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.933:0.001,0.065,0.934	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.948:0.001,0.051,0.948	1|1:1.943:0.001,0.055,0.944	1|1:1.844:0.002,0.153,0.846	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.938:0.001,0.06,0.939	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.913:0.007,0.072,0.921	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.961:0,0.038,0.961	0|0:0:1,0,0	1|1:1.973:0,0.027,0.973	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.929:0.002,0.068,0.93	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15442866	SNP-3.15441512.	C	A	.	PASS	AR2=0.991;DR2=0.993;AF=0.339	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.094:0.909,0.088,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.796:0.01,0.184,0.806	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.824:0.008,0.16,0.832	0|0:0.314:0.687,0.313,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.084:0.918,0.08,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.087:0.915,0.082,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.102:0.901,0.096,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.404:0.598,0.4,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.316:0.711,0.262,0.027	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.092:0.911,0.085,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15443878	SNP-3.15442524.	A	G	.	PASS	AR2=1;DR2=1;AF=0.294	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.077:0.925,0.074,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15445331	SNP-3.15443977.	A	G	.	PASS	AR2=0.968;DR2=0.974;AF=0.284	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.757:0.013,0.216,0.77	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.059:0.107,0.727,0.166	1|1:1.74:0.017,0.227,0.756	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.734:0.018,0.23,0.752	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.74:0.017,0.226,0.757	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.733:0.018,0.231,0.751	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.816:0.011,0.163,0.827	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.77:0.013,0.203,0.784	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.824:0.005,0.165,0.829	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.718:0.02,0.242,0.738	1|1:1.711:0.021,0.246,0.733	0|0:0:1,0,0	1|1:1.731:0.018,0.232,0.749	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.73:0.018,0.233,0.749	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.501:0.149,0.202,0.649	0|0:0:1,0,0	1|1:1.714:0.021,0.244,0.735	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.729:0.019,0.234,0.748	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.73:0.019,0.233,0.748	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.748:0.015,0.222,0.763	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.72:0.019,0.241,0.739	0|0:0:1,0,0	1|1:1.73:0.019,0.233,0.748	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0
+3	15446453	SNP-3.15445099.	C	A	.	PASS	AR2=1;DR2=1;AF=0.346	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15447518	SNP-3.15446164.	A	G	.	PASS	AR2=0.994;DR2=0.996;AF=0.273	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.465:0.552,0.431,0.017	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.893:0.003,0.101,0.896	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.876:0.004,0.115,0.88	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.792:0.016,0.175,0.809	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.059:0.943,0.056,0.002	0|0:0:1,0,0	1|1:2:0,0,1
+3	15449713	SNP-3.15448359.	A	G	.	PASS	AR2=0.982;DR2=0.985;AF=0.427	GT:DS:GP	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.031:0.97,0.03,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.112:0.891,0.105,0.004	0|0:0.108:0.896,0.101,0.003	0|0:0.312:0.708,0.272,0.02	0|0:0.282:0.736,0.245,0.018	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.164:0.842,0.151,0.007	0|0:0.335:0.687,0.291,0.022	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.176:0.83,0.163,0.007	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.089:0.914,0.084,0.003	0|0:0.037:0.964,0.035,0.001	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.14:0.865,0.13,0.005	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.991:0,0.008,0.991	1|1:1.989:0,0.01,0.989	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.038:0.004,0.954,0.042	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	0|0:0.12:0.884,0.112,0.004	0|0:0.102:0.902,0.095,0.003	1|1:1.986:0,0.013,0.987	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.04:0,0.96,0.04	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.843:0.001,0.156,0.844	0|0:0:1,0,0	1|1:1.927:0,0.073,0.927	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.127:0.877,0.118,0.004	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.211:0.8,0.19,0.011	0|0:0:1,0,0	0|0:0.125:0.879,0.116,0.004	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.175:0.833,0.16,0.008	0|0:0.164:0.842,0.152,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.143:0.863,0.132,0.005	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.138:0.865,0.132,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.146:0.86,0.134,0.006	1|0:1:0,1,0	0|0:0.131:0.874,0.122,0.004	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.105:0.899,0.098,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.11:0.89,0.109,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1
+3	15451422	SNP-3.15450068.	A	G	.	PASS	AR2=1;DR2=1;AF=0.251	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15451733	SNP-3.15450379.	C	A	.	PASS	AR2=0.989;DR2=0.991;AF=0.337	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.092:0.911,0.087,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.812:0.011,0.166,0.823	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.718:0.019,0.244,0.737	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.707:0.312,0.67,0.018	0|0:0.078:0.924,0.074,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.17:0.836,0.159,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.862:0.005,0.129,0.866	0|1:1:0,1,0	1|1:1.836:0.007,0.151,0.843	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.82:0.006,0.167,0.827	0|0:0:1,0,0	0|1:1.18:0.064,0.692,0.244	1|1:1.797:0.013,0.177,0.81	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15452883	SNP-3.15451529.	A	G	.	PASS	AR2=0.985;DR2=0.986;AF=0.37	GT:DS:GP	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:0.964:0.269,0.499,0.233	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.986:0,0.013,0.986	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.168:0.839,0.155,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.158:0.847,0.147,0.005	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.057:0.945,0.053,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.012:0.244,0.499,0.257	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:1.014:0.244,0.499,0.258	0|0:1.014:0.244,0.499,0.258	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.965:0.268,0.5,0.233	1|1:2:0,0,1
+3	15453230	SNP-3.15451876.	A	G	.	PASS	AR2=0.987;DR2=0.989;AF=0.295	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.184:0.824,0.167,0.008	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.07:0.932,0.066,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.827:0.007,0.158,0.835	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.732:0.024,0.22,0.756	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.874:0.004,0.118,0.878	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.548:0.047,0.357,0.595	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.226:0.783,0.207,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.874:0.004,0.118,0.878	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.879:0.004,0.113,0.883	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.862:0.005,0.129,0.867	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.133:0.873,0.122,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.92:0.003,0.074,0.923	1|1:2:0,0,1	1|1:1.907:0.001,0.092,0.908	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.882:0.004,0.11,0.886	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.875:0.004,0.117,0.879	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15454100	SNP-3.15452746.	C	A	.	PASS	AR2=1;DR2=1;AF=0.311	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.028:0.972,0.028,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15454253	SNP-3.15452899.	C	A	.	PASS	AR2=0.988;DR2=0.991;AF=0.312	GT:DS:GP	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.86:0.004,0.132,0.864	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.115:0.888,0.109,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.143:0.862,0.133,0.005	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.486:0.566,0.382,0.052	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.127:0.877,0.119,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.571:0.031,0.367,0.602	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.932:0,0.067,0.933	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.775:0.002,0.222,0.777	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.097:0.905,0.093,0.002	0|0:0.036:0.965,0.034,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.921:0.003,0.072,0.924	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.122:0.882,0.114,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	15455450	SNP-3.15454096.	A	G	.	PASS	AR2=0.983;DR2=0.986;AF=0.275	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.861:0.005,0.129,0.866	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.844:0.006,0.143,0.851	1|1:1.793:0.007,0.193,0.8	0|0:0.041:0.96,0.04,0	0|0:0:1,0,0	1|1:1.642:0.024,0.31,0.666	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.034:0.966,0.033,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.448:0.051,0.45,0.499	0|1:0.935:0.078,0.909,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.198:0.81,0.181,0.009	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.09:0.91,0.09,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.122:0.878,0.122,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.215:0.786,0.213,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.858:0.001,0.14,0.859	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.939:0.001,0.059,0.94	1|1:1.84:0.005,0.149,0.846	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.933:0.001,0.066,0.934	1|1:2:0,0,1	1|1:1.874:0.001,0.124,0.875	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.967:0,0.033,0.967	1|1:1.966:0,0.034,0.966	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.082:0.918,0.082,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.742:0.017,0.224,0.759	0|0:0:1,0,0	0|0:0:1,0,0
+3	15456672	SNP-3.15455318.	C	A	.	PASS	AR2=1;DR2=1;AF=0.309	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15457547	SNP-3.15456193.	A	G	.	PASS	AR2=0.982;DR2=0.985;AF=0.282	GT:DS:GP	1|1:1.849:0.007,0.137,0.856	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.03:0.97,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.818:0.01,0.161,0.829	0|0:0:1,0,0	1|0:0.42:0.582,0.416,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.028,0	1|1:2:0,0,1	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.816:0.01,0.163,0.827	1|1:2:0,0,1	1|1:1.906:0.001,0.093,0.906	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.726:0.011,0.251,0.737	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.872:0.004,0.12,0.876	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.949:0,0.051,0.949	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.888:0.004,0.104,0.892	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.944:0,0.056,0.944	0|0:0:1,0,0	1|1:1.981:0,0.019,0.981	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.651:0.018,0.313,0.669	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.56:0.024,0.392,0.584	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.932:0.001,0.066,0.933	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.868:0.005,0.123,0.873	0|0:0:1,0,0	1|1:1.907:0.001,0.092,0.907	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.907:0.001,0.091,0.908	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.781:0.011,0.198,0.792	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0.041:0.96,0.039,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.949:0.001,0.05,0.95	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.986:0,0.013,0.987	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.883:0.004,0.108,0.887	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15457947	SNP-3.15456593.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.334	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.965:0,0.034,0.966	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.199:0.81,0.181,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.106:0.896,0.101,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.214:0.799,0.189,0.013	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.201:0.809,0.18,0.01	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15458910	SNP-3.15457556.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.319	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.095:0.906,0.092,0.002	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.957:0.002,0.039,0.959	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15459967	SNP-3.15458613.	A	G	.	PASS	AR2=0.995;DR2=0.996;AF=0.282	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.393:0.015,0.577,0.408	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.079:0.922,0.078,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.258:0.748,0.246,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.188:0.813,0.186,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.926:0.002,0.07,0.928	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	15462917	SNP-3.15461563.	A	G	.	PASS	AR2=0.993;DR2=0.995;AF=0.37	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.759:0.015,0.211,0.774	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.743:0.017,0.223,0.76	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.335:0.067,0.531,0.402	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.879:0.003,0.114,0.882	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.795:0.01,0.184,0.805	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.858:0,0.142,0.858	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15463539	SNP-3.15462185.	A	G	.	PASS	AR2=1;DR2=1;AF=0.294	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15463651	SNP-3.15462297.	A	G	.	PASS	AR2=1;DR2=1;AF=0.405	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15473418	SNP-3.15472064.	C	A	.	PASS	AR2=1;DR2=1;AF=0.442	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15476947	SNP-3.15475593.	C	A	.	PASS	AR2=0.98;DR2=0.984;AF=0.354	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.871:0,0.129,0.871	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1.167:0.18,0.474,0.347	0|1:1:0,1,0	1|1:1.227:0.124,0.526,0.35	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.71:0.005,0.28,0.715	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.524:0.485,0.505,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.164:0.171,0.494,0.335	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.401:0.117,0.366,0.518	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:0.869:0.233,0.666,0.102	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.203:0.096,0.605,0.299	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.959:0,0.04,0.96	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.919:0.002,0.077,0.921	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15482936	SNP-3.15481582.	A	G	.	PASS	AR2=0.977;DR2=0.982;AF=0.433	GT:DS:GP	1|1:2:0,0,1	0|0:0.019:0.981,0.019,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.262:0.756,0.227,0.018	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.091:0.912,0.086,0.002	1|1:2:0,0,1	0|0:0.336:0.689,0.286,0.025	1|1:1.923:0.002,0.074,0.924	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.328:0.7,0.271,0.029	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.117:0.884,0.114,0.001	0|0:0.425:0.621,0.333,0.046	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.228:0.789,0.195,0.017	0|0:0:1,0,0	0|0:0.178:0.837,0.148,0.015	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.874:0.004,0.117,0.878	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.334:0.699,0.269,0.033	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.191:0.815,0.179,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.175:0.831,0.163,0.006	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.55:0.481,0.489,0.031	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.1:0.902,0.095,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.843:0.01,0.137,0.853	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.357:0.671,0.301,0.028	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.935:0.002,0.062,0.936	0|0:0.146:0.863,0.129,0.009	0|0:0.043:0.957,0.043,0	0|0:0.403:0.638,0.32,0.041	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.945:0,0.054,0.946	1|1:2:0,0,1	1|1:1.799:0.005,0.19,0.804	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0.09:0.912,0.086,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.096:0.905,0.094,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.974:0,0.026,0.974	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15482992	SNP-3.15481638.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.338	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.37:0.075,0.48,0.445	0|0:0.045:0.956,0.044,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.095:0.907,0.091,0.002	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.935,0.064,0.001	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.043:0.957,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15483577	SNP-3.15482223.	A	G	.	PASS	AR2=0.992;DR2=0.993;AF=0.267	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.116:0.887,0.109,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0.136:0.869,0.126,0.005	0|0:0.043:0.957,0.043,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.041:0.959,0.04,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.262:0.76,0.218,0.022	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.187:0.824,0.166,0.01	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.247:0.762,0.229,0.009	0|0:0.166:0.834,0.166,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.124:0.878,0.121,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.958,0.042,0	1|1:2:0,0,1	0|0:0.046:0.954,0.046,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15485632	SNP-3.15484278.	A	G	.	PASS	AR2=0.991;DR2=0.992;AF=0.403	GT:DS:GP	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.286:0.737,0.241,0.022	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.193:0.818,0.171,0.011	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.877:0.005,0.114,0.882	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.915:0.001,0.083,0.916	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.786:0.008,0.198,0.794	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.925:0.003,0.069,0.928	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.074:0.927,0.073,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.786:0.01,0.194,0.796	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.792:0.012,0.184,0.804	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.92:0.003,0.074,0.923	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.905:0.005,0.086,0.909	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.018:0.982,0.018,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.9:0.003,0.093,0.904	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.013,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.888:0.004,0.103,0.892	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15486523	SNP-3.15485169.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.388	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.891:0.003,0.104,0.893	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.94:0,0.06,0.94	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.028,0.972	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.925:0.075,0.924,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.814:0.186,0.814,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.931:0.001,0.067,0.932	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15486613	SNP-3.15485259.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.326	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.887:0.003,0.108,0.889	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.931:0,0.069,0.931	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15487081	SNP-3.15485727.	A	G	.	PASS	AR2=0.863;DR2=0.893;AF=0.247	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.013:0.251,0.486,0.263	0|1:1.091:0.213,0.484,0.304	1|0:0.534:0.505,0.456,0.039	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.047:0.231,0.491,0.278	0|1:0.94:0.293,0.474,0.233	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.097:0.915,0.074,0.012	0|1:0.756:0.339,0.565,0.095	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.053:0.231,0.484,0.285	0|0:0:1,0,0	0|0:0.69:0.419,0.471,0.11	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.652:0.433,0.481,0.085	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.35:0.683,0.285,0.033	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.488:0.567,0.378,0.055	0|0:0.628:0.449,0.474,0.077	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.86:0.333,0.474,0.193	0|0:0.326:0.702,0.27,0.028	0|0:0:1,0,0	0|0:0.363:0.668,0.301,0.031	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.626:0.465,0.443,0.091	0|0:0.276:0.744,0.236,0.02	1|1:2:0,0,1	0|0:0.296:0.725,0.253,0.022	0|0:0:1,0,0	0|0:0.344:0.688,0.28,0.032	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.531:0.564,0.341,0.095	0|1:0.851:0.319,0.511,0.17	0|0:0:1,0,0	0|0:0.714:0.402,0.481,0.116	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.953:0.119,0.809,0.072	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.209:0.798,0.194,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.372:0.662,0.305,0.033	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.159:0.841,0.159,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.956,0.043,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.326:0.7,0.274,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.903,0.097,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.801:0.336,0.528,0.136	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.781:0.346,0.526,0.127	1|0:0.514:0.491,0.503,0.006	0|0:0.531:0.554,0.361,0.085	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.524:0.48,0.515,0.004	1|1:1.44:0.152,0.255,0.592	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.913:0.292,0.503,0.205	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.307:0.717,0.259,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.375:0.659,0.307,0.034	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.715:0.376,0.533,0.091	1|0:0.95:0.281,0.489,0.231	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.708:0.411,0.471,0.119	0|0:0.739:0.513,0.235,0.252	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.147:0.853,0.147,0	0|0:0:1,0,0	0|0:0.336:0.692,0.28,0.028	0|0:0.207:0.808,0.176,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.039:0.241,0.48,0.279	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.3:0.721,0.258,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.467:0.605,0.323,0.072	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.317:0.708,0.267,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.768:0.376,0.479,0.145	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.263:0.028,0.682,0.29	0|0:0:1,0,0
+3	15487224	SNP-3.15485870.	A	G	.	PASS	AR2=0.997;DR2=0.998;AF=0.268	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:0.612:0.388,0.612,0	0|0:0:1,0,0	0|0:0.097:0.903,0.097,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15487245	SNP-3.15485891.	A	G	.	PASS	AR2=0.937;DR2=0.951;AF=0.203	GT:DS:GP	0|0:0.273:0.74,0.247,0.013	0|0:0.004:0.996,0.004,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0.012:0.989,0.011,0	0|0:0.003:0.997,0.003,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	1|1:1.59:0.051,0.308,0.641	1|1:1.63:0.021,0.327,0.651	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.628:0.047,0.278,0.675	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.652:0.031,0.286,0.683	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.163:0.846,0.145,0.009	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0.028:0.972,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.937,0.061,0.001	1|1:1.115:0.233,0.419,0.348	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.867:0.332,0.469,0.199	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.12:0.886,0.107,0.006	0|0:0:1,0,0	0|0:0.092:0.911,0.087,0.003	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0.23:0.774,0.221,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.947,0.052,0.001	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|1:0.528:0.478,0.517,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:0.461:0.55,0.439,0.011	0|0:0.088:0.913,0.086,0.001	0|1:1:0,1,0	0|0:0.352:0.664,0.321,0.016	0|0:0.401:0.617,0.365,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.151:0.854,0.142,0.004	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.211:0.795,0.199,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.05,0.001	0|0:0.247:0.759,0.235,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.342:0.671,0.315,0.013	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.615:0.044,0.296,0.66	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.177:0.834,0.155,0.011	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.724:0.021,0.234,0.745	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.929,0.07,0.001	0|0:0.139:0.867,0.127,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1.24:0.102,0.555,0.342	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.746:0.013,0.228,0.759	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.93,0.068,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.033:0.968,0.032,0.001	0|0:0:1,0,0	0|0:0:1,0,0
+3	15487265	SNP-3.15485911.	C	A	.	PASS	AR2=0.982;DR2=0.986;AF=0.383	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.223:0.789,0.199,0.012	0|0:0.148:0.858,0.136,0.006	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.101:0.901,0.097,0.002	0|0:0.177:0.831,0.161,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.18:0.828,0.164,0.008	1|1:2:0,0,1	0|0:0.141:0.865,0.13,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.406:0.638,0.317,0.044	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.19:0.82,0.171,0.009	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.115:0.888,0.109,0.003	0|0:0.021:0.979,0.02,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.192:0.819,0.17,0.011	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.092:0.909,0.089,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.93,0.069,0.001	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.357:0.661,0.322,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.15:0.856,0.138,0.006	0|0:0.138:0.866,0.129,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.289:0.729,0.253,0.018	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.11:0.893,0.103,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.249:0.762,0.228,0.01	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.367:0.669,0.296,0.036	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15491015	SNP-3.15489661.	C	A	.	PASS	AR2=0.952;DR2=0.965;AF=0.406	GT:DS:GP	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.271:0.749,0.23,0.02	0|0:0.531:0.526,0.416,0.057	0|0:0.332:0.696,0.275,0.029	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.307:0.718,0.257,0.025	0|0:0.493:0.559,0.388,0.053	0|0:0:1,0,0	0|0:0.504:0.55,0.396,0.054	0|0:0.51:0.546,0.398,0.056	1|1:2:0,0,1	0|0:0.461:0.585,0.369,0.046	1|0:1:0,1,0	0|0:0.208:0.802,0.188,0.01	1|1:2:0,0,1	0|0:0.217:0.798,0.187,0.015	0|0:0:1,0,0	0|0:0.209:0.802,0.186,0.012	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.339:0.674,0.312,0.013	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0.521:0.545,0.389,0.066	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.101:0.902,0.095,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.053:0.948,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.938,0.06,0.003	0|0:0:1,0,0	0|0:0.256:0.761,0.222,0.017	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.204:0.804,0.188,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.293:0.73,0.248,0.023	0|0:0.423:0.615,0.346,0.039	0|0:0:1,0,0	0|0:0.72:0.37,0.539,0.09	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.238:0.772,0.218,0.01	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.254:0.762,0.221,0.016	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.202:0.81,0.178,0.012	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.286:0.735,0.243,0.021	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.331:0.694,0.28,0.026	0|0:0.299:0.722,0.257,0.021	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.251:0.765,0.219,0.016	0|0:0.175:0.834,0.157,0.009	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.378:0.651,0.319,0.029	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.185:0.824,0.167,0.009	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.96,0.04,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.062:0.939,0.06,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15493570	SNP-3.15492216.	C	A	.	PASS	AR2=1;DR2=1;AF=0.35	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15493738	SNP-3.15492384.	C	A	.	PASS	AR2=1;DR2=1;AF=0.202	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.03:0.97,0.03,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.009:0.991,0.008,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15494636	SNP-3.15493282.	C	A	.	PASS	AR2=0.997;DR2=0.998;AF=0.199	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.53:0.488,0.494,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	15497892	SNP-3.15496538.	C	A	.	PASS	AR2=0.948;DR2=0.961;AF=0.262	GT:DS:GP	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.091:0.914,0.081,0.005	0|1:1:0,1,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.536:0.547,0.37,0.083	1|0:1:0,1,0	1|0:0.566:0.505,0.425,0.071	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.468:0.586,0.36,0.054	0|0:0.126:0.877,0.12,0.003	0|1:1:0,1,0	0|0:0.471:0.584,0.362,0.054	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.3:0.72,0.26,0.02	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.117:0.887,0.11,0.004	0|0:0.213:0.799,0.19,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.204:0.807,0.182,0.011	0|0:0.222:0.785,0.208,0.007	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.078:0.924,0.075,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.102:0.898,0.102,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.022:0.979,0.021,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.23:0.77,0.23,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.187:0.821,0.171,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.184:0.823,0.17,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.334:0.7,0.266,0.034	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.486:0.708,0.098,0.194	0|0:0.122:0.881,0.117,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.269:0.756,0.219,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.22:0.798,0.183,0.019	0|0:0:1,0,0	0|0:0.362:0.675,0.289,0.036	0|0:0.261:0.751,0.238,0.012	0|1:1:0,1,0	0|1:0.423:0.623,0.331,0.046	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.209:0.8,0.192,0.008	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.181:0.824,0.17,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.18:0.831,0.159,0.011	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.95,0.049,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.106:0.898,0.098,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.297:0.704,0.295,0.001	0|0:0:1,0,0
+3	15505717	SNP-3.15504363.	A	G	.	PASS	AR2=1;DR2=1;AF=0.424	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15507530	SNP-3.15506176.	A	G	.	PASS	AR2=0.992;DR2=0.995;AF=0.432	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.146:0.862,0.131,0.008	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.111:0.89,0.109,0.001	1|0:1:0,1,0	1|1:1.629:0.023,0.324,0.653	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.102:0.902,0.095,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.592:0.424,0.559,0.017	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.45:0.555,0.441,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.977:0,0.022,0.978	0|1:1:0,1,0	1|1:2:0,0,1
+3	15508267	SNP-3.15506913.	C	A	.	PASS	AR2=0.995;DR2=0.995;AF=0.366	GT:DS:GP	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.094:0.908,0.09,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.278:0.734,0.254,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0.056:0.945,0.054,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.129:0,0.87,0.129	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.09:0.911,0.088,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.117:0.887,0.11,0.004	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.926,0.072,0.002	0|0:0:1,0,0	0|0:0.113:0.888,0.111,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.135:0.87,0.126,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15511291	SNP-3.15509937.	A	G	.	PASS	AR2=1;DR2=1;AF=0.426	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15512315	SNP-3.15510961.	A	G	.	PASS	AR2=1;DR2=1;AF=0.23	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15514427	SNP-3.15513073.	A	G	.	PASS	AR2=0.995;DR2=0.996;AF=0.454	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.077:0.924,0.074,0.001	1|0:1:0,1,0	0|0:0.176:0.828,0.169,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.138:0.87,0.122,0.008	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.05:0.951,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.292:0.73,0.247,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.24:0.766,0.228,0.006	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.052:0.948,0.052,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.074:0.929,0.067,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15516480	SNP-3.15515126.	C	A	.	PASS	AR2=0.988;DR2=0.992;AF=0.365	GT:DS:GP	0|0:0.025:0.975,0.024,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.096:0.904,0.096,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0.059:0.943,0.056,0.002	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.563:0.437,0.563,0	0|1:0.523:0.478,0.522,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.969:0.205,0.621,0.174	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.982,0.018,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.97,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.028:0.973,0.027,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.05:0.951,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|1:1:0,1,0	0|0:0.294:0.706,0.294,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.028:0.973,0.027,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.963:0.002,0.034,0.965	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|1:0.571:0.431,0.568,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15519829	SNP-3.15518475.	A	G	.	PASS	AR2=0.997;DR2=0.997;AF=0.402	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.935,0.065,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.932,0.068,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.252:0.75,0.248,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.955:0.045,0.955,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.911:0.001,0.086,0.913	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.93,0.068,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.938,0.061,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15523120	SNP-3.15521766.	C	A	.	PASS	AR2=0.987;DR2=0.99;AF=0.313	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.552:0.034,0.38,0.586	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.84:0.002,0.157,0.841	1|0:0.951:0.278,0.494,0.228	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.521:0.06,0.358,0.582	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.755:0.016,0.213,0.771	0|0:0:1,0,0	1|0:1.112:0.202,0.483,0.315	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	15523284	SNP-3.15521930.	A	G	.	PASS	AR2=0.994;DR2=0.995;AF=0.416	GT:DS:GP	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.802:0.007,0.184,0.809	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.757:0.009,0.225,0.766	1|1:1.899:0.001,0.099,0.9	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.799:0.01,0.181,0.809	0|0:0:1,0,0	1|1:1.834:0.008,0.151,0.842	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.963:0.001,0.036,0.964	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.961:0,0.038,0.961	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.939:0,0.06,0.939	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.731:0.022,0.226,0.752	0|0:0:1,0,0	1|1:2:0,0,1
+3	15524641	SNP-3.15523287.	C	A	.	PASS	AR2=0.935;DR2=0.947;AF=0.484	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.762:0,0.238,0.762	0|1:1.083:0.056,0.805,0.139	1|1:1.57:0.034,0.361,0.605	1|1:1.638:0.031,0.3,0.669	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.018:0.215,0.552,0.233	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.116:0.19,0.504,0.306	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.871:0.14,0.849,0.011	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.548:0.033,0.385,0.581	1|1:2:0,0,1	1|1:1.836:0.007,0.15,0.843	1|1:2:0,0,1	1|1:1.646:0.041,0.272,0.687	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.879:0.32,0.481,0.199	0|0:0.656:0.381,0.581,0.038	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.793:0.244,0.718,0.038	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.331:0.094,0.482,0.425	0|0:0.276:0.776,0.171,0.053	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.188:0.117,0.578,0.305	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.938:0.003,0.057,0.94	1|1:2:0,0,1	1|1:1.825:0.008,0.159,0.833	1|1:2:0,0,1	1|1:1.577:0.043,0.336,0.621	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.523:0.053,0.371,0.576	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.529:0.056,0.36,0.585	1|1:1.555:0.047,0.351,0.602	1|1:1.531:0.055,0.359,0.586	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.974:0,0.026,0.974	1|1:1.747:0.004,0.244,0.752	1|1:1.789:0.005,0.202,0.793	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.74:0.013,0.235,0.753	0|0:0:1,0,0	1|1:1.673:0.019,0.289,0.692	0|0:0:1,0,0	1|1:1.637:0.034,0.295,0.671	0|0:0:1,0,0	1|1:1.879:0.001,0.118,0.88	0|0:0:1,0,0	1|1:1.649:0.085,0.18,0.734	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.864:0,0.136,0.864	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.043:0.13,0.698,0.173	1|1:2:0,0,1	1|1:1.751:0.011,0.226,0.763	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.301:0.118,0.463,0.419	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.051:0.95,0.049,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0.054:0.946,0.053,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.044:0.22,0.516,0.264	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.065:0.937,0.062,0.001	1|0:1.051:0.191,0.567,0.242	1|0:1.599:0.032,0.336,0.632	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.052:0.949,0.051,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.094:0.908,0.09,0.002	1|0:1.285:0.101,0.513,0.386	1|1:2:0,0,1	0|1:1.098:0.174,0.553,0.272	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.07:0.931,0.067,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.943,0.056,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.979:0,0.02,0.979	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.743:0.025,0.207,0.768	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.886:0.008,0.097,0.895	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.894:0.005,0.095,0.9	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.948:0.003,0.046,0.951	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.035:0.966,0.034,0.001	1|1:2:0,0,1	0|0:0:1,0,0
+3	15529204	SNP-3.15527850.	A	G	.	PASS	AR2=0.997;DR2=0.998;AF=0.415	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.955,0.045,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.211:0.002,0.784,0.214	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:1.983:0,0.016,0.983	1|1:1.999:0,0.001,0.999	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.259:0.001,0.738,0.261	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0.063:0.937,0.062,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15529402	SNP-3.15528048.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.362	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.976:0,0.023,0.977	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.991:0,0.009,0.991	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0.032:0.968,0.032,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.026:0.974,0.026,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.018:0.982,0.018,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.018,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.035:0.965,0.035,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0
+3	15530319	SNP-3.15528965.	A	G	.	PASS	AR2=0.996;DR2=0.997;AF=0.289	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.141:0.042,0.775,0.183	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	1|1:1.974:0,0.026,0.974	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.976:0,0.023,0.976	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.619:0.004,0.373,0.623	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.982:0,0.017,0.982	1|1:2:0,0,1	0|0:0.021:0.979,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15530704	SNP-3.15529350.	A	G	.	PASS	AR2=0.983;DR2=0.987;AF=0.49	GT:DS:GP	1|1:1.79:0.009,0.191,0.799	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.542:0.469,0.519,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.871:0.002,0.124,0.874	1|1:1.735:0.018,0.229,0.753	0|1:1.451:0.055,0.44,0.505	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.831:0.007,0.155,0.838	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.835:0.006,0.153,0.841	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.774:0.013,0.199,0.787	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.966:0,0.033,0.967	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.194:0.816,0.173,0.01	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.903:0.003,0.091,0.906	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.887:0.003,0.106,0.89	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.936:0.001,0.062,0.937	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.2:0.816,0.168,0.016	0|1:1:0,1,0	0|0:0.198:0.817,0.168,0.015	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.81:0.009,0.173,0.819	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.943:0.001,0.054,0.944	1|1:2:0,0,1	1|1:1.926:0.001,0.072,0.927	1|1:1.976:0,0.023,0.976	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.967:0,0.032,0.967	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.123:0.883,0.11,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.17:0.84,0.15,0.01	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.928:0.002,0.068,0.93	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992
+3	15533512	SNP-3.15532158.	A	G	.	PASS	AR2=0.956;DR2=0.962;AF=0.414	GT:DS:GP	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.994:0.274,0.458,0.268	0|0:0.489:0.571,0.37,0.059	1|1:2:0,0,1	0|1:1.115:0.177,0.531,0.292	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|1:1.822:0.008,0.161,0.83	0|1:1.166:0.158,0.519,0.324	1|1:2:0,0,1	0|0:0.698:0.41,0.483,0.107	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.862:0.009,0.12,0.871	1|1:1.722:0.015,0.247,0.738	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.658:0.043,0.256,0.701	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.761:0.356,0.527,0.117	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:1.904:0.001,0.093,0.906	1|1:1.939:0.001,0.06,0.94	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.947:0.001,0.052,0.948	1|1:1.974:0,0.025,0.975	1|1:2:0,0,1	0|1:0.911:0.09,0.909,0.001	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	0|0:0:1,0,0	1|1:1.651:0.052,0.246,0.703	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.84:0.007,0.146,0.847	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.809:0.206,0.78,0.014	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.132:0.012,0.845,0.143	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.831:0.006,0.157,0.837	1|1:2:0,0,1	1|1:1.805:0.007,0.181,0.812	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.921:0.002,0.075,0.923	0|0:0:1,0,0	1|0:0.894:0.309,0.489,0.203	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.899:0.005,0.091,0.904	0|1:0.965:0.245,0.545,0.21	1|0:1.285:0.08,0.554,0.365	1|1:1.883:0.003,0.11,0.887	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.641:0.024,0.31,0.665	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.61:0.052,0.287,0.662	0|0:0:1,0,0	1|1:1.045:0.224,0.506,0.27	1|1:1.862:0.007,0.123,0.869	0|0:0:1,0,0	0|1:0.984:0.266,0.484,0.25	0|1:0.914:0.292,0.501,0.207	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15534597	SNP-3.15533243.	C	A	.	PASS	AR2=0.985;DR2=0.988;AF=0.464	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.764:0.018,0.199,0.782	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.816:0.01,0.164,0.826	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.976:0,0.024,0.976	1|1:2:0,0,1	1|1:1.818:0.011,0.161,0.829	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.975:0,0.024,0.975	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.775:0.013,0.199,0.788	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.917:0.006,0.071,0.923	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.978:0,0.022,0.978	1|1:1.821:0.029,0.121,0.85	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	1|1:1.77:0.013,0.205,0.783	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.818:0.011,0.161,0.829	1|1:1.818:0.011,0.161,0.829	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.818:0.011,0.161,0.829	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.711:0.028,0.232,0.74	1|1:1.586:0.017,0.381,0.602	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.818:0.011,0.161,0.829	0|0:0:1,0,0	1|1:1.732:0.018,0.232,0.75	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.859:0.012,0.117,0.871	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0
+3	15534832	SNP-3.15533478.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.486	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.961:0.001,0.038,0.962	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.955,0.045,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.822:0.003,0.171,0.826	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.925:0.001,0.072,0.927	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0
+3	15535412	SNP-3.15534058.	A	G	.	PASS	AR2=0.982;DR2=0.985;AF=0.311	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.032:0.968,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.816:0.009,0.165,0.825	0|0:0:1,0,0	0|0:0.729:0.4,0.47,0.129	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.793:0.01,0.188,0.802	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.861:0.004,0.131,0.865	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.549:0.033,0.385,0.582	1|1:2:0,0,1	1|1:1.925:0.001,0.074,0.925	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.871:0.002,0.125,0.873	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.965:0,0.035,0.965	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.724:0.02,0.237,0.744	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.624:0.029,0.317,0.653	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.793:0.01,0.188,0.803	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.828:0.006,0.16,0.834	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.885:0.001,0.112,0.887	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.895:0.004,0.098,0.899	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.817:0.007,0.168,0.825	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.771:0.016,0.198,0.787	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.955,0.044,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.883:0.005,0.108,0.887	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992
+3	15550180	SNP-3.15548826.	A	G	.	PASS	AR2=0.996;DR2=0.996;AF=0.288	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.883:0.001,0.114,0.884	1|1:2:0,0,1	1|1:1.968:0,0.031,0.969	1|1:2:0,0,1	0|1:0.915:0.098,0.888,0.014	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.918:0.001,0.08,0.919	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.843:0.004,0.148,0.848	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.885:0.002,0.111,0.887	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.907:0.001,0.09,0.908	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.888:0.004,0.103,0.893	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15550690	SNP-3.15549336.	C	A	.	PASS	AR2=0.993;DR2=0.994;AF=0.494	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.9:0.002,0.097,0.901	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.792:0.01,0.189,0.802	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.039:0.961,0.039,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.959,0.04,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.879:0.004,0.113,0.883	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.165:0.841,0.154,0.005	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.966:0,0.034,0.966	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.938:0,0.062,0.938	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.931:0,0.069,0.931	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.883:0.003,0.111,0.886	1|1:1.909:0.002,0.087,0.911	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.932:0,0.068,0.932	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.944:0.002,0.052,0.946	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.844:0.008,0.14,0.852	1|1:1.914:0.002,0.082,0.916	1|1:2:0,0,1	1|1:1.893:0.003,0.101,0.896	0|0:0:1,0,0
+3	15550878	SNP-3.15549524.	A	G	.	PASS	AR2=0.996;DR2=0.997;AF=0.322	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.585:0.537,0.34,0.123	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.97,0.029,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15551274	SNP-3.15549920.	A	G	.	PASS	AR2=0.979;DR2=0.982;AF=0.491	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.704:0.024,0.249,0.728	1|1:1.95:0.001,0.048,0.951	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0.193:0.807,0.193,0	1|1:1.937:0,0.062,0.938	1|1:1.763:0.016,0.205,0.779	1|1:2:0,0,1	1|1:1.927:0,0.072,0.928	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.895:0.001,0.102,0.896	1|1:2:0,0,1	1|1:1.932:0.001,0.067,0.933	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.909:0.001,0.088,0.911	1|1:1.849:0.004,0.142,0.853	0|1:0.676:0.325,0.675,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.97:0,0.03,0.97	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.877:0.002,0.119,0.879	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	1|1:1.939:0.001,0.059,0.94	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.908:0.005,0.083,0.913	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:1.794:0.025,0.157,0.818	1|1:1.969:0,0.03,0.97	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.893:0.003,0.1,0.896	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.88:0.003,0.113,0.884	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.991:0,0.009,0.991	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.917:0.001,0.081,0.918	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.881:0.003,0.114,0.883	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.681:0.005,0.309,0.686	1|1:1.556:0.026,0.391,0.582	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.961:0.001,0.037,0.962	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.797:0.006,0.19,0.803	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.723:0.025,0.228,0.747	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:1.799:0.003,0.196,0.802	1|1:1.867:0.001,0.13,0.869	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.722:0.024,0.229,0.746	1|1:1.905:0.001,0.093,0.906	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.924:0.001,0.074,0.925	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	1|1:1.907:0.002,0.09,0.908	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.954:0.001,0.045,0.954	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.027,0.973	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.886:0.003,0.108,0.889	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15553792	SNP-3.15552438.	A	G	.	PASS	AR2=0.996;DR2=0.996;AF=0.229	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.967:0,0.032,0.968	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.22:0.793,0.194,0.013	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.936,0.063,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.034:0.966,0.034,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.168:0.846,0.14,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15554798	SNP-3.15553444.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.452	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.153:0.854,0.139,0.007	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.095:0.906,0.093,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.968,0.032,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.13:0.873,0.123,0.003	1|1:2:0,0,1	1|1:1.969:0,0.031,0.969	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0
+3	15558056	SNP-3.15556702.	C	A	.	PASS	AR2=0.993;DR2=0.995;AF=0.461	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.154:0.851,0.144,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.175:0.826,0.172,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.055:0.946,0.054,0.001	0|0:0.018:0.982,0.018,0	0|0:0.045:0.955,0.044,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.73:0.281,0.709,0.01	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0.022:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.049:0.952,0.046,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	1|1:1.514:0,0.485,0.514	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.068:0.933,0.065,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.011:0.989,0.011,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.011:0.989,0.011,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.107:0.894,0.106,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.936,0.062,0.002	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.036:0.964,0.035,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.041:0.96,0.039,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0
+3	15558608	SNP-3.15557254.	A	G	.	PASS	AR2=0.968;DR2=0.976;AF=0.413	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	1|1:1.866:0.005,0.124,0.871	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.33:0.703,0.264,0.033	1|0:1:0,1,0	0|0:0.422:0.633,0.313,0.054	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.759:0.016,0.209,0.775	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.181:0.819,0.181,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.865:0.005,0.125,0.87	1|1:2:0,0,1	1|1:1.904:0.001,0.094,0.905	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.011:0.989,0.011,0	0|0:0.363:0.674,0.29,0.037	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.357:0.674,0.295,0.031	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.451:0.599,0.351,0.05	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	0|0:0.262:0.753,0.232,0.015	1|1:1.853:0.006,0.134,0.859	0|0:0.073:0.928,0.072,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0	0|0:0:1,0,0	1|1:1.83:0.001,0.168,0.831	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.131:0.884,0.102,0.015	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.12:0.885,0.11,0.005	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.307:0.722,0.249,0.029	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.167:0.85,0.134,0.017	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.9:0.003,0.093,0.903	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.795:0.452,0.302,0.247	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.849:0.007,0.138,0.856	1|1:1.759:0.025,0.19,0.785	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.737:0.402,0.458,0.139	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.127:0.888,0.097,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1
+3	15560579	SNP-3.15559225.	A	G	.	PASS	AR2=0.99;DR2=0.991;AF=0.379	GT:DS:GP	1|1:1.967:0,0.032,0.967	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.675:0.002,0.322,0.676	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.921:0.002,0.076,0.922	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0,0.032,0.968	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:1.855:0.006,0.134,0.86	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.953:0,0.046,0.954	1|1:1.898:0.003,0.097,0.901	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.836:0.002,0.159,0.839	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.877:0.127,0.87,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.125:0.875,0.125,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.767:0.011,0.211,0.778	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.973:0.001,0.026,0.973	1|1:1.959:0.001,0.04,0.959	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.912:0.006,0.077,0.918	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.983:0,0.017,0.983	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.98:0,0.019,0.98	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|1:1.041:0.249,0.461,0.29	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.918:0.002,0.078,0.92	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.955:0.001,0.043,0.956	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15562827	SNP-3.15561473.	A	G	.	PASS	AR2=0.968;DR2=0.976;AF=0.193	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.622:0.505,0.368,0.127	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.946,0.054,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.139:0.862,0.136,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.134:0.867,0.132,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.084:0.918,0.079,0.003	1|1:2:0,0,1	0|0:0.02:0.98,0.02,0	0|0:0.029:0.971,0.028,0	0|0:0.056:0.944,0.055,0.001	0|0:0.056:0.944,0.056,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.41:0.625,0.339,0.035	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.385:0.627,0.361,0.012	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.526:0.517,0.44,0.043	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.209:0.798,0.195,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.157:0.844,0.156,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.947:0.267,0.518,0.214	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.228:0.789,0.193,0.017	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.667:0.401,0.531,0.068	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.294:0.756,0.193,0.051	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.103:0.902,0.093,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15566406	SNP-3.15565052.	C	A	.	PASS	AR2=0.975;DR2=0.98;AF=0.378	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1.043:0.074,0.81,0.117	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.978:0.107,0.809,0.084	0|0:0.033:0.967,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.606:0.06,0.275,0.665	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	1|0:1.15:0.024,0.802,0.174	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.96:0.113,0.814,0.073	1|1:1.997:0,0.003,0.997	1|1:1.999:0,0.001,0.999	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.953:0.127,0.792,0.081	0|0:0.008:0.992,0.008,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:0.915:0.179,0.727,0.094	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.065:0.031,0.873,0.096	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.902:0.003,0.093,0.905	0|0:0.003:0.997,0.003,0	0|1:1:0,1,0	1|0:0.96:0.098,0.844,0.058	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.056:0.027,0.89,0.083	1|1:1.911:0.002,0.084,0.914	1|1:1.952:0.001,0.045,0.953	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1.055:0.099,0.746,0.154	0|1:1:0,1,0	1|1:1.812:0.001,0.186,0.813	1|1:2:0,0,1	0|0:0.033:0.967,0.032,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.061:0.059,0.82,0.121	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.935:0.002,0.062,0.937	1|1:2:0,0,1	1|1:1.171:0.243,0.344,0.413	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.881:0,0.119,0.881	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.779:0.009,0.203,0.788	1|0:0.891:0.242,0.625,0.133	0|0:0:1,0,0
+3	15567183	SNP-3.15565829.	C	A	.	PASS	AR2=0.991;DR2=0.992;AF=0.418	GT:DS:GP	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.802:0.011,0.175,0.813	0|0:0.077:0.925,0.073,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.079:0.922,0.076,0.001	1|1:1.881:0.003,0.114,0.883	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.043:0.957,0.043,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.912:0.003,0.083,0.914	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.792:0.01,0.187,0.803	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1.032:0.071,0.825,0.103	1|1:1.849:0.006,0.139,0.855	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.984:0,0.016,0.984	1|1:1.998:0,0.002,0.998	1|1:1.954:0,0.046,0.954	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.087:0.916,0.082,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.955:0,0.044,0.956	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|0:1.294:0,0.706,0.294	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.071:0.931,0.067,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.918:0.001,0.08,0.919	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.038:0.962,0.037,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0
+3	15568341	SNP-3.15566987.	C	A	.	PASS	AR2=0.98;DR2=0.987;AF=0.395	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.561:0.041,0.357,0.602	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.497:0.046,0.411,0.543	1|1:1.485:0.088,0.34,0.573	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.575:0.001,0.423,0.576	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.942:0.001,0.056,0.943	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.456:0.072,0.4,0.528	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1.473:0.044,0.439,0.517	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.799:0.002,0.197,0.801	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.831:0.014,0.14,0.845	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.839:0.009,0.144,0.847	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.902:0.004,0.09,0.906	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.684:0.001,0.314,0.685	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15574292	SNP-3.15572938.	C	A	.	PASS	AR2=0.964;DR2=0.974;AF=0.409	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.555:0.048,0.349,0.603	1|1:2:0,0,1	1|1:1.733:0.016,0.234,0.749	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.359:0.124,0.394,0.482	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.905:0.001,0.093,0.906	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.7:0.018,0.263,0.719	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.83:0.011,0.149,0.841	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.837:0.001,0.162,0.838	0|1:1.654:0.03,0.285,0.684	1|1:1.736:0.033,0.198,0.769	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.515:0.063,0.359,0.578	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.385:0.107,0.402,0.492	1|1:1.588:0.038,0.336,0.626	1|0:1.477:0.064,0.396,0.54	1|1:1.648:0.022,0.309,0.669	1|1:2:0,0,1	1|1:1.973:0,0.027,0.973	1|1:1.9:0.002,0.095,0.903	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.9:0.003,0.094,0.903	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.946:0.001,0.053,0.946	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.81:0.006,0.178,0.816	0|0:0:1,0,0	1|1:1.851:0.001,0.146,0.852	1|1:1.372:0.11,0.407,0.483	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.697:0.021,0.26,0.719	1|1:1.772:0.006,0.216,0.778	1|1:2:0,0,1	1|1:1.938:0.001,0.061,0.939	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.784:0.008,0.2,0.792	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.891:0.002,0.105,0.893	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.807:0.007,0.18,0.813	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.901:0.003,0.093,0.904	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0
+3	15575719	SNP-3.15574365.	A	G	.	PASS	AR2=0.98;DR2=0.984;AF=0.306	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.732:0.018,0.232,0.75	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.946:0,0.053,0.946	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.962:0,0.038,0.962	1|1:1.872:0.004,0.12,0.876	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.709:0.017,0.256,0.726	1|1:1.844:0.003,0.15,0.847	1|1:1.732:0.017,0.233,0.749	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.709:0.381,0.529,0.09	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.773:0.009,0.21,0.782	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.837:0.007,0.148,0.845	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1.506:0.06,0.373,0.566	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.884:0.004,0.109,0.887	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.629:0.022,0.327,0.651	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.558:0.037,0.368,0.595	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.719:0.018,0.244,0.737	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15576415	SNP-3.15575061.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.454	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.042:0.958,0.041,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.075:0,0.925,0.075	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.024:0.976,0.023,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0
+3	15576739	SNP-3.15575385.	A	G	.	PASS	AR2=0.972;DR2=0.979;AF=0.459	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.969,0.031,0	0|0:0.026:0.974,0.026,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.611:0.06,0.269,0.671	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.597:0.036,0.332,0.633	1|1:2:0,0,1	0|0:0.012:0.988,0.012,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.089:0.912,0.088,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.828:0.007,0.157,0.835	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.8:0.009,0.183,0.808	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.747:0.015,0.223,0.762	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.79:0.011,0.188,0.801	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.815:0.008,0.168,0.823	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.822:0.008,0.162,0.83	1|1:2:0,0,1	1|1:1.839:0.006,0.149,0.845	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:0.526:0.476,0.522,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.797:0.011,0.182,0.807	1|1:1.834:0.006,0.155,0.839	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.786:0.01,0.194,0.796	0|0:0:1,0,0	1|0:0.925:0.248,0.58,0.173	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.393:0.082,0.443,0.475	1|0:1:0,1,0	0|0:0.016:0.984,0.016,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.926:0.003,0.069,0.928	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.436:0.087,0.39,0.523	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.611:0.053,0.283,0.664	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.909:0.005,0.082,0.914	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.816:0.009,0.167,0.825	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.81:0.013,0.164,0.823	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.98:0,0.019,0.98	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15577351	SNP-3.15575997.	A	G	.	PASS	AR2=0.997;DR2=0.998;AF=0.358	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.101:0.902,0.096,0.003	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.298:0.706,0.291,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.363:0.002,0.634,0.365	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15577952	SNP-3.15576598.	A	G	.	PASS	AR2=1;DR2=1;AF=0.348	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15578355	SNP-3.15577001.	C	A	.	PASS	AR2=0.975;DR2=0.982;AF=0.423	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.499:0.068,0.365,0.567	0|0:0:1,0,0	0|0:0.05:0.95,0.049,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.043:0.957,0.042,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0.183:0.819,0.179,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.718:0.018,0.246,0.736	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.975:0,0.025,0.975	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.948:0.003,0.046,0.951	1|0:1:0,1,0	1|1:1.681:0.024,0.272,0.705	0|0:0:1,0,0	1|1:1.344:0.108,0.439,0.453	1|0:1:0,1,0	1|0:1.544:0.041,0.373,0.586	1|1:1.644:0.018,0.321,0.662	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.721:0.009,0.261,0.73	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.36:0.151,0.339,0.51	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.011:0.989,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.753:0.014,0.22,0.766	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.86:0,0.14,0.86	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.268:0.797,0.137,0.066	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.05,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.79:0.005,0.2,0.795	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.974:0.001,0.025,0.974	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.807:0.006,0.181,0.813	0|0:0:1,0,0	0|0:0:1,0,0
+3	15578684	SNP-3.15577330.	C	A	.	PASS	AR2=0.977;DR2=0.982;AF=0.393	GT:DS:GP	0|0:0:1,0,0	1|1:1.878:0.005,0.111,0.884	0|0:0:1,0,0	1|1:1.912:0.003,0.082,0.915	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.182:0.151,0.516,0.333	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.24:0.762,0.237,0.002	0|0:0:1,0,0	0|1:1.351:0.083,0.484,0.434	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.06:0.206,0.528,0.266	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:0.979:0.244,0.532,0.223	0|1:1.332:0.102,0.464,0.434	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.409:0.064,0.463,0.473	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.012,0.987	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.92:0,0.079,0.92	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.676:0.035,0.253,0.711	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.92:0.001,0.079,0.92	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.544:0.05,0.356,0.594	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.581:0.047,0.324,0.628	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	15579534	SNP-3.15578180.	A	G	.	PASS	AR2=0.969;DR2=0.975;AF=0.329	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.933,0.065,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.722:0.019,0.239,0.742	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.245:0.758,0.239,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.085:0.918,0.079,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.706:0.023,0.247,0.729	0|0:0.171:0.832,0.165,0.003	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.795:0.01,0.185,0.805	1|1:1.839:0.01,0.141,0.849	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.849:0.212,0.727,0.061	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.768:0.015,0.202,0.783	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.929:0.002,0.068,0.931	1|1:2:0,0,1	1|1:1.788:0.011,0.19,0.799	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.724:0.463,0.351,0.186	0|0:0:1,0,0	1|1:1.463:0.042,0.453,0.505	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.939,0.06,0.001	1|1:2:0,0,1	0|0:0.085:0.918,0.079,0.003	0|0:0.1:0.901,0.097,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.657:0.032,0.279,0.689	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.044:0.956,0.044,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.067:0.935,0.064,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.028:0.972,0.027,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.825:0.008,0.158,0.834	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.831:0.009,0.151,0.84	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.125:0.88,0.115,0.005	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.099:0.905,0.092,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.17:0.846,0.139,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.903:0.002,0.093,0.905	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.925:0.002,0.071,0.927	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.854:0.007,0.132,0.861	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.943:0.234,0.589,0.177	0|0:0:1,0,0	1|1:2:0,0,1
+3	15586161	SNP-3.15584807.	A	G	.	PASS	AR2=0.984;DR2=0.987;AF=0.409	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.861:0.005,0.129,0.866	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.159:0.844,0.152,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.202:0.809,0.18,0.011	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.906:0.001,0.091,0.907	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.238:0.777,0.208,0.015	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.203:0.801,0.195,0.004	1|1:1.892:0.008,0.092,0.9	0|0:0:1,0,0	1|1:1.734:0.007,0.252,0.741	1|1:2:0,0,1	0|0:0.148:0.856,0.139,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.205:0.806,0.184,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.092:0.91,0.089,0.001	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.283:0.735,0.247,0.018	0|0:0.067:0.934,0.065,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0.074:0.926,0.073,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.23:0.784,0.201,0.014	1|1:2:0,0,1	0|0:0.039:0.961,0.039,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.15:0.855,0.14,0.005	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.174:0.834,0.157,0.009	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.976:0,0.024,0.976	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.031:0.969,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.062:0.939,0.059,0.002	1|1:1.986:0,0.014,0.986	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.032:0.968,0.031,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.135:0.873,0.119,0.008	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.266:0.754,0.225,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15587687	SNP-3.15586333.	A	G	.	PASS	AR2=0.919;DR2=0.935;AF=0.21	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.352:0.68,0.288,0.032	0|0:0.331:0.72,0.229,0.051	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.046:0.177,0.599,0.224	0|0:0:1,0,0	0|0:0.173:0.827,0.172,0	0|0:0.149:0.853,0.145,0.002	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.297:0.727,0.25,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.633:0.454,0.46,0.087	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.238:0.776,0.21,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.665:0.456,0.423,0.121	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.199:0.809,0.182,0.009	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.177:0.831,0.162,0.007	1|1:2:0,0,1	0|0:0.185:0.826,0.162,0.011	0|0:0.273:0.743,0.241,0.016	0|0:0.103:0.902,0.094,0.004	0|0:0:1,0,0	0|0:0.246:0.769,0.216,0.015	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.249:0.768,0.214,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.095:0.908,0.088,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.312:0.72,0.248,0.032	0|0:0:1,0,0	0|1:0.833:0.271,0.625,0.104	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.684:0.42,0.476,0.104	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0.315:0.705,0.274,0.02	1|0:0.709:0.393,0.505,0.102	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.302:0.725,0.249,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.134:0.871,0.124,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.024:0.977,0.023,0	0|0:0.255:0.762,0.221,0.017	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.351:0.677,0.296,0.027	0|0:0:1,0,0	0|0:0.296:0.726,0.252,0.022	0|0:0.282:0.736,0.246,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.15:0.859,0.133,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.88:0.319,0.483,0.198	1|1:2:0,0,1	0|0:0.265:0.763,0.208,0.028	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.903:0.302,0.493,0.205	1|0:0.876:0.305,0.514,0.181	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.867:0.312,0.509,0.179	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.087:0.913,0.087,0	0|0:0.217:0.795,0.193,0.012	1|1:2:0,0,1	0|0:0.193:0.815,0.177,0.008	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.523:0.071,0.335,0.594	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.101:0.903,0.093,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15588394	SNP-3.15587040.	C	A	.	PASS	AR2=0.973;DR2=0.979;AF=0.364	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.305:0.087,0.52,0.392	0|0:0.473:0.586,0.355,0.059	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|1:1.277:0.019,0.685,0.296	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.807:0.01,0.174,0.817	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.366:0.021,0.592,0.387	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.731:0.02,0.229,0.751	1|1:1.574:0.047,0.332,0.621	0|1:1:0,1,0	0|1:1.244:0.136,0.484,0.38	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.689:0.013,0.284,0.702	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.738:0.017,0.228,0.755	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.321:0.692,0.296,0.012	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.771:0.016,0.197,0.787	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.984:0,0.016,0.984	1|1:1.885:0,0.114,0.885	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.808:0.007,0.177,0.816	1|1:1.751:0.026,0.197,0.777	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.919:0.002,0.076,0.921	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.889:0.002,0.107,0.891	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.75:0.014,0.222,0.764	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.973:0,0.027,0.973	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.738:0.017,0.227,0.755	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15589168	SNP-3.15587814.	A	G	.	PASS	AR2=0.911;DR2=0.934;AF=0.275	GT:DS:GP	0|0:0.091:0.913,0.084,0.003	0|0:0.245:0.778,0.199,0.023	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.466:0.591,0.351,0.057	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:1.052:0.287,0.375,0.338	1|0:0.926:0.295,0.485,0.221	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.872:0.006,0.116,0.878	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.465:0.072,0.391,0.537	1|1:1.411:0.128,0.332,0.54	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.164:0.838,0.159,0.003	1|1:2:0,0,1	0|0:0.772:0.41,0.408,0.182	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.116:0.89,0.105,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.926,0.072,0.002	1|1:2:0,0,1	0|0:0.397:0.614,0.375,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.759:0.016,0.209,0.775	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.249:0.766,0.218,0.016	0|0:0.182:0.818,0.182,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.617:0.478,0.428,0.094	1|0:1.1:0.114,0.672,0.214	1|1:2:0,0,1	0|1:1.275:0.114,0.498,0.389	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.247:0.757,0.238,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.502:0.541,0.416,0.043	1|0:0.513:0.541,0.405,0.054	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.654:0.372,0.603,0.025	0|0:0.335:0.681,0.303,0.016	0|0:0.04:0.96,0.04,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.179:0.825,0.17,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.927:0.006,0.061,0.933	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.619:0.048,0.284,0.668	1|1:2:0,0,1	1|1:1.802:0.005,0.188,0.807	0|0:0.145:0.861,0.133,0.006	0|0:0.001:0.999,0.001,0	1|1:1.934:0.001,0.064,0.935	1|0:0.537:0.52,0.422,0.058	0|0:0:1,0,0	0|0:0.163:0.847,0.144,0.009	0|0:0.246:0.776,0.202,0.022	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.347:0.691,0.271,0.038	1|1:1.778:0.011,0.2,0.789	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.222:0.129,0.519,0.351	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.808:0.011,0.169,0.819	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.106:0.897,0.101,0.002	1|1:2:0,0,1	0|0:0.339:0.691,0.279,0.03	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.267:0.751,0.231,0.018	0|0:0.164:0.842,0.152,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.247:0.147,0.459,0.394	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.966:0.001,0.033,0.967	0|0:0.617:0.525,0.332,0.142	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.647:0.026,0.3,0.674	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.248:0.767,0.217,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.945,0.054,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.965,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.409:0.593,0.406,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	15591769	SNP-3.15590415.	A	G	.	PASS	AR2=0.971;DR2=0.976;AF=0.416	GT:DS:GP	1|1:1.891:0.005,0.1,0.895	0|0:0:1,0,0	1|1:1.825:0.006,0.163,0.831	1|1:1.832:0.018,0.133,0.85	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.378:0.639,0.343,0.017	0|0:0.176:0.833,0.157,0.01	1|0:1:0,1,0	0|0:0.19:0.82,0.171,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.102:0.904,0.091,0.005	0|0:0:1,0,0	1|1:1.844:0.008,0.14,0.852	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.127:0.878,0.117,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.891:0.002,0.106,0.892	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.887:0.005,0.104,0.892	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1.001:0.042,0.916,0.043	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.892:0.004,0.1,0.896	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.74:0.012,0.236,0.752	1|1:2:0,0,1	1|1:1.865:0.005,0.126,0.87	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.067:0.088,0.757,0.155	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.837:0.318,0.527,0.155	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1.036:0.137,0.689,0.173	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.31:0.721,0.247,0.031	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.979:0,0.021,0.979	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.876:0.005,0.115,0.881	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.609:0.017,0.357,0.626	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.193:0.814,0.178,0.008	0|0:0:1,0,0	0|0:0.039:0.962,0.037,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.949:0,0.05,0.95	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.181:0.829,0.161,0.01	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.078:0.922,0.078,0	0|0:0:1,0,0	1|1:1.834:0.009,0.148,0.843	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.942:0.002,0.055,0.943	1|1:2:0,0,1	1|1:1.901:0.005,0.09,0.906	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.501:0.608,0.283,0.109	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.083:0.918,0.08,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.935:0.001,0.064,0.936	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.935:0.002,0.061,0.937	1|1:1.835:0.007,0.151,0.842	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15592964	SNP-3.15591610.	A	G	.	PASS	AR2=0.949;DR2=0.959;AF=0.244	GT:DS:GP	0|0:0.236:0.78,0.204,0.016	0|0:0:1,0,0	0|0:0.278:0.742,0.239,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.105:0.898,0.099,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.251:0.765,0.22,0.015	1|1:2:0,0,1	1|1:1.941:0.004,0.052,0.945	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.263:0.757,0.223,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.205:0.805,0.184,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.329:0.707,0.258,0.035	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.93,0.07,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.955,0.045,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.957,0.043,0	0|1:1:0,1,0	0|0:0.237:0.78,0.203,0.017	1|1:1.92:0.001,0.079,0.92	0|0:0.193:0.821,0.165,0.014	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.113:0.89,0.108,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.03:0.97,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.253:0.763,0.22,0.017	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.239:0.776,0.209,0.015	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.118:0.885,0.113,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.015,0	0|0:0:1,0,0	0|0:0.261:0.753,0.233,0.014	1|1:2:0,0,1	0|0:0.395:0.644,0.318,0.038	1|1:2:0,0,1	0|0:0.117:0.886,0.111,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0.141:0.866,0.127,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.306:0.714,0.265,0.02	0|0:0.119:0.884,0.114,0.003	0|0:0.12:0.883,0.115,0.002	0|0:0.146:0.861,0.132,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.406:0.614,0.365,0.021	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.969,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.24:0.776,0.208,0.016	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.118:0.889,0.104,0.007	0|0:0.215:0.797,0.19,0.013	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.309:0.716,0.258,0.026	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.129:0.875,0.121,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.213:0.8,0.187,0.013	0|0:0.024:0.977,0.023,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.064:0.94,0.057,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.139:0.868,0.125,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.968,0.031,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.969,0.031,0	0|0:0.033:0.967,0.032,0.001	0|0:0:1,0,0	0|1:1.39:0.034,0.543,0.424	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.206:0.797,0.2,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.281:0.739,0.241,0.02	0|0:0.219:0.794,0.193,0.013	0|0:0.053:0.949,0.05,0.001	0|0:0:1,0,0
+3	15593033	SNP-3.15591679.	A	G	.	PASS	AR2=0.991;DR2=0.992;AF=0.407	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.944:0.001,0.054,0.945	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.136:0.869,0.126,0.005	0|0:0.094:0.909,0.087,0.003	0|0:0.143:0.863,0.131,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.033:0.968,0.031,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.946,0.053,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.08:0.922,0.076,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.207:0.822,0.149,0.029	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.905,0.093,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.928,0.07,0.001	0|0:0.114:0.889,0.108,0.003	0|0:0.03:0.97,0.029,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.956:0.002,0.041,0.957	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.091:0.912,0.084,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.935:0,0.065,0.935	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.947,0.051,0.002	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.97,0.03,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.06:0.941,0.058,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.087:0.915,0.083,0.002	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.95,0.048,0.002	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.919:0,0.081,0.919	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.099:0.903,0.094,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.028,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.068:0.932,0.067,0.001	0|0:0.004:0.996,0.004,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15593083	SNP-3.15591729.	C	A	.	PASS	AR2=0.927;DR2=0.942;AF=0.307	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.655:0.413,0.52,0.068	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.303:0.098,0.501,0.401	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.326:0.105,0.463,0.432	1|1:1.992:0,0.007,0.992	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.963:0,0.037,0.963	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.647:0.038,0.277,0.685	0|0:0:1,0,0	1|1:1.645:0.038,0.278,0.683	1|1:1.846:0.001,0.153,0.847	1|1:1.888:0.003,0.106,0.891	1|1:2:0,0,1	1|1:1.579:0.04,0.341,0.619	1|1:1.878:0.004,0.114,0.882	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.947:0.267,0.518,0.215	1|1:1.863:0.004,0.128,0.868	1|1:1.849:0.007,0.137,0.856	1|1:2:0,0,1	1|0:1.436:0.03,0.505,0.466	1|0:1.086:0.161,0.593,0.247	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.017:0.168,0.647,0.185	0|0:0:1,0,0	0|1:1.228:0.067,0.639,0.294	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	1|0:1.021:0.236,0.506,0.258	0|0:0:1,0,0	1|1:1.424:0.061,0.454,0.485	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.453:0.077,0.392,0.53	1|1:1.8:0.011,0.177,0.811	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.522:0.013,0.453,0.535	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.861:0.008,0.123,0.869	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.816:0.003,0.177,0.82	0|0:0:1,0,0	1|1:1.529:0.051,0.37,0.579	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.464:0.063,0.41,0.527	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.41:0.142,0.306,0.552	1|1:2:0,0,1	1|1:1.84:0,0.16,0.84	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.726:0.019,0.236,0.745	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.808:0.007,0.178,0.815	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.245:0.118,0.519,0.363	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.621:0.433,0.514,0.053	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.918:0.003,0.076,0.921	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.649:0.038,0.275,0.687	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.574:0,0.426,0.574	0|1:1.024:0.217,0.542,0.241	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.733:0.014,0.238,0.747	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.636:0.038,0.288,0.674	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.848:0.007,0.137,0.856	1|1:2:0,0,1	1|1:1.863:0.006,0.125,0.869	1|1:1.849:0.007,0.137,0.856	1|1:2:0,0,1	1|1:1.827:0.008,0.157,0.835	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.166:0.117,0.599,0.284	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15593983	SNP-3.15592629.	C	A	.	PASS	AR2=0.989;DR2=0.991;AF=0.378	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.93:0.07,0.93,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.273:0.091,0.545,0.364	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:1.786:0.014,0.187,0.8	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.641:0.015,0.33,0.655	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.935:0.002,0.06,0.938	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.794:0.015,0.177,0.809	1|1:2:0,0,1	1|1:1.692:0.032,0.243,0.724	1|1:1.922:0,0.078,0.922	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.8:0.013,0.174,0.813	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.947:0,0.052,0.948	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.922:0,0.077,0.922	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.879:0.001,0.119,0.88	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15596333	SNP-3.15594979.	A	G	.	PASS	AR2=1;DR2=1;AF=0.387	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.981:0,0.019,0.981	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15597089	SNP-3.15595735.	C	A	.	PASS	AR2=1;DR2=1;AF=0.412	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15599575	SNP-3.15598221.	A	G	.	PASS	AR2=1;DR2=1;AF=0.387	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15600047	SNP-3.15598693.	A	G	.	PASS	AR2=1;DR2=1;AF=0.418	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15600414	SNP-3.15599060.	C	A	.	PASS	AR2=1;DR2=1;AF=0.381	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15601856	SNP-3.15600502.	C	A	.	PASS	AR2=1;DR2=1;AF=0.249	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15602755	SNP-3.15601401.	C	A	.	PASS	AR2=1;DR2=1;AF=0.377	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15604306	SNP-3.15602952.	A	G	.	PASS	AR2=0.968;DR2=0.975;AF=0.44	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.786:0.011,0.191,0.798	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.536:0.553,0.358,0.089	0|0:0.277:0.761,0.201,0.038	0|0:0:1,0,0	0|0:0.594:0.444,0.518,0.038	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.911:0.002,0.084,0.913	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.804:0.011,0.174,0.815	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.943:0.001,0.054,0.944	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.987:0,0.013,0.987	1|1:1.891:0.003,0.103,0.894	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.866:0.004,0.127,0.869	0|0:0.049:0.951,0.048,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.305:0.726,0.244,0.031	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.121:0.881,0.117,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.121:0.883,0.112,0.004	1|1:1.97:0,0.029,0.971	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.095:0.909,0.087,0.004	0|0:0:1,0,0	1|1:1.87:0.004,0.122,0.874	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.786:0.004,0.206,0.79	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.819:0,0.181,0.819	1|1:1.843:0.004,0.149,0.847	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.86:0.004,0.131,0.865	0|0:0:1,0,0	0|0:0.166:0.844,0.146,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.903,0.097,0	0|1:1.568:0.014,0.405,0.581	0|0:0:1,0,0	1|1:1.808:0.006,0.18,0.814	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.885:0.003,0.108,0.888	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.955,0.042,0.003	0|0:0:1,0,0	1|1:1.318:0.032,0.619,0.35	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0.269:0.753,0.226,0.021	0|0:0.035:0.965,0.035,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.974:0,0.026,0.974	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.864:0,0.136,0.864	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.027:0.973,0.027,0	1|1:1.646:0.009,0.335,0.656	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.05:0.952,0.047,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.793:0.315,0.578,0.107	0|0:0.229:0.781,0.208,0.01	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.149:0.862,0.126,0.012	1|1:1.868:0.004,0.123,0.873	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.142:0.866,0.127,0.007	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.81:0.009,0.172,0.819	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15605931	SNP-3.15604577.	A	G	.	PASS	AR2=0.99;DR2=0.993;AF=0.449	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.685:0.444,0.426,0.129	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.254:0.765,0.216,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.173:0.838,0.152,0.011	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.164:0.841,0.154,0.005	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.228:0.789,0.195,0.017	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.927:0.001,0.07,0.928	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.225:0.784,0.206,0.009	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.068:0.936,0.061,0.004	1|1:2:0,0,1
+3	15606188	SNP-3.15604834.	A	G	.	PASS	AR2=0.99;DR2=0.992;AF=0.389	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.956:0.001,0.042,0.957	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.863:0.005,0.127,0.868	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.888:0.003,0.106,0.891	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.974:0,0.025,0.975	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.98:0,0.019,0.98	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.744:0.021,0.215,0.765	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.747:0.016,0.22,0.764	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.74:0.008,0.244,0.748	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.851:0.003,0.143,0.854	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.944:0.001,0.053,0.945	0|0:0:1,0,0	1|1:1.891:0.003,0.103,0.894	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.905:0.002,0.092,0.907	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.867:0.004,0.124,0.872	1|1:1.477:0.072,0.379,0.549	0|0:0:1,0,0	1|1:2:0,0,1
+3	15606329	SNP-3.15604975.	A	G	.	PASS	AR2=0.889;DR2=0.917;AF=0.478	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.511:0.495,0.498,0.006	1|1:1.42:0.087,0.406,0.507	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.505:0.047,0.4,0.552	1|1:1.46:0.051,0.438,0.511	1|1:1.771:0.016,0.197,0.787	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.602:0.041,0.316,0.643	1|1:1.566:0.049,0.337,0.614	1|1:1.657:0.037,0.269,0.694	1|1:1.425:0.069,0.436,0.495	1|1:2:0,0,1	1|1:1.402:0.084,0.43,0.486	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.214:0.156,0.474,0.37	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.519:0.04,0.401,0.559	1|0:1.318:0.111,0.46,0.429	0|1:0.956:0.269,0.507,0.224	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.392:0.093,0.421,0.485	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.159:0.178,0.484,0.338	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.392:0.093,0.422,0.485	1|1:2:0,0,1	1|1:1.875:0.008,0.109,0.883	1|1:2:0,0,1	0|1:1.146:0.155,0.543,0.302	1|0:1.306:0.108,0.477,0.414	1|1:2:0,0,1	1|1:1.704:0.011,0.275,0.714	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.049:0.222,0.506,0.272	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.615:0.037,0.31,0.652	0|1:1.28:0.115,0.489,0.396	0|0:0:1,0,0	0|1:1.092:0.202,0.504,0.294	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.925,0.074,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.965,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.374:0.645,0.335,0.019	1|1:1.795:0.01,0.186,0.805	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.047:0.223,0.507,0.27	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.394:0.637,0.332,0.031	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.131:0.875,0.119,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.367:0.64,0.353,0.007	0|0:0:1,0,0	1|1:1.214:0.165,0.456,0.379	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.075:0.204,0.516,0.28	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.723:0.017,0.243,0.74	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.85:0.013,0.124,0.863	0|0:0.47:0.576,0.378,0.046	0|0:0:1,0,0	0|0:0.529:0.562,0.347,0.091	0|1:1.373:0.111,0.405,0.484	1|1:2:0,0,1	0|1:1.296:0.132,0.44,0.428	0|0:0.046:0.956,0.043,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.337:0.687,0.288,0.024	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.818:0.011,0.161,0.829	0|0:0:1,0,0	1|1:1.524:0.053,0.37,0.577	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.011:0.989,0.011,0	1|1:2:0,0,1	0|0:0.011:0.989,0.011,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.38:0.112,0.397,0.492	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.442:0.062,0.433,0.504	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.382:0.097,0.423,0.479	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.044:0.211,0.533,0.256	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.306:0.122,0.451,0.427	1|1:1.85:0.011,0.129,0.861	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.299:0.132,0.436,0.432	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.566:0.035,0.365,0.601	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:1.935:0.002,0.061,0.937	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.452:0.556,0.436,0.008	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.164:0.178,0.479,0.342	1|0:0.923:0.287,0.504,0.209	1|1:2:0,0,1	0|0:0:1,0,0
+3	15607445	SNP-3.15606091.	A	G	.	PASS	AR2=1;DR2=1;AF=0.488	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.985:0,0.014,0.986	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15610080	SNP-3.15608726.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.306	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.935,0.065,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.992:0.009,0.989,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.96,0.04,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15610619	SNP-3.15609265.	C	A	.	PASS	AR2=1;DR2=1;AF=0.298	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15613875	SNP-3.15612521.	C	A	.	PASS	AR2=0.978;DR2=0.985;AF=0.318	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.431:0.616,0.337,0.047	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.323:0.707,0.262,0.03	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0.482:0.578,0.361,0.061	0|0:0.464:0.591,0.353,0.056	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.906:0,0.094,0.906	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.474:0.585,0.357,0.058	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.38:0.641,0.339,0.02	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.292:0.735,0.238,0.027	0|1:0.476:0.583,0.358,0.059	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.479:0.581,0.359,0.06	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15615734	SNP-3.15614380.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.438	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.031:0.969,0.031,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.962,0.037,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.033:0.967,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15617233	SNP-3.15615879.	C	A	.	PASS	AR2=1;DR2=1;AF=0.436	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15618492	SNP-3.15617138.	C	A	.	PASS	AR2=1;DR2=1;AF=0.305	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15618508	SNP-3.15617154.	C	A	.	PASS	AR2=0.998;DR2=0.999;AF=0.429	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.729:0,0.271,0.729	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.83:0,0.17,0.83	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15625137	SNP-3.15623783.	C	A	.	PASS	AR2=0.997;DR2=0.998;AF=0.452	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.955,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.089:0.913,0.085,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.099:0.903,0.096,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.015:0,0.985,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.048:0,0.952,0.048	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.175:0.825,0.175,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.85:0,0.15,0.85	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15625252	SNP-3.15623898.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.449	GT:DS:GP	0|0:0.081:0.921,0.077,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.981:0,0.018,0.982	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.102:0.901,0.096,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.96,0.039,0.001	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.085:0.917,0.081,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.112:0.891,0.107,0.003	1|0:1:0,1,0	1|0:1.011:0,0.989,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.963:0,0.037,0.963	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.985:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.966:0,0.033,0.967	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.067:0.934,0.065,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.06:0.941,0.058,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.146:0.859,0.135,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15626613	SNP-3.15625259.	C	A	.	PASS	AR2=0.992;DR2=0.994;AF=0.455	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.952:0.003,0.042,0.955	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.988:0,0.011,0.988	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0.023:0.978,0.022,0	0|0:0:1,0,0	0|0:0.055:0.946,0.053,0.001	0|0:0.046:0.955,0.045,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.712:0,0.287,0.713	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.871:0.138,0.852,0.01	0|0:0.033:0.967,0.032,0	1|0:1.033:0.006,0.955,0.039	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.156:0.845,0.154,0.001	1|1:2:0,0,1	1|0:1.2:0.019,0.761,0.22	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.486:0.555,0.404,0.041	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.065:0.936,0.062,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.069:0.931,0.069,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15627582	SNP-3.15626228.	C	A	.	PASS	AR2=0.995;DR2=0.995;AF=0.435	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.975:0,0.025,0.975	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.019:0,0.981,0.019	0|0:0.034:0.966,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.897:0.004,0.096,0.9	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.944:0,0.056,0.944	1|1:2:0,0,1	0|0:0.027:0.974,0.026,0	1|1:1.62:0.01,0.361,0.63	1|1:1.917:0.002,0.078,0.92	1|1:2:0,0,1	1|1:1.817:0.005,0.173,0.822	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.005:0.005,0.984,0.011	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.083:0.918,0.081,0.001	1|1:1.946:0,0.053,0.946	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0.02:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.033,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.969,0.031,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.067:0.936,0.061,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15630323	SNP-3.15628969.	C	A	.	PASS	AR2=1;DR2=1;AF=0.305	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.966:0,0.034,0.966	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15630482	SNP-3.15629128.	C	A	.	PASS	AR2=0.997;DR2=0.998;AF=0.432	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.361:0.697,0.245,0.058	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.673:0.001,0.325,0.674	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15632541	SNP-3.15631187.	C	A	.	PASS	AR2=0.97;DR2=0.979;AF=0.392	GT:DS:GP	0|0:0:1,0,0	1|1:1.572:0.049,0.33,0.621	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.713:0.022,0.244,0.734	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.619:0.033,0.315,0.652	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.512:0.04,0.408,0.552	1|1:2:0,0,1	1|1:1.461:0.053,0.433,0.514	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.96,0.04,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.048:0.952,0.048,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.875:0.135,0.856,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.534:0.052,0.362,0.586	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.544:0.052,0.352,0.596	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.92:0.001,0.078,0.921	1|1:2:0,0,1	1|1:1.458:0.073,0.396,0.531	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.7:0.022,0.257,0.721	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.796:0.005,0.193,0.801	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.795:0.001,0.202,0.796	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.498:0.063,0.377,0.561	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.945:0.004,0.048,0.948	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.713:0.022,0.244,0.734	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.718:0.021,0.24,0.739	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.965:0.001,0.034,0.965	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15633595	SNP-3.15632241.	C	A	.	PASS	AR2=1;DR2=1;AF=0.302	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15634843	SNP-3.15633489.	C	A	.	PASS	AR2=0.986;DR2=0.988;AF=0.426	GT:DS:GP	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0.01:0.99,0.01,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.019:0.981,0.019,0	1|1:2:0,0,1	1|1:1.97:0.001,0.029,0.97	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.113:0.036,0.816,0.148	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:1.676:0.008,0.307,0.685	0|0:0:1,0,0	0|1:0.803:0.333,0.532,0.135	0|0:0.188:0.812,0.188,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.085:0.917,0.081,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.09:0.91,0.089,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0.002:0.998,0.002,0	0|0:0.001:0.999,0.001,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0.034:0.966,0.034,0	0|0:0.018:0.982,0.018,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.158:0.842,0.158,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.018:0.982,0.018,0	1|0:1.025:0.014,0.948,0.038	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.186:0.815,0.185,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.156:0.044,0.756,0.2	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.186:0.818,0.178,0.004	1|1:1.902:0.002,0.094,0.904	0|0:0:1,0,0	1|1:1.932:0.001,0.065,0.933	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.035:0.965,0.034,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.186:0.815,0.183,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.042:0.959,0.04,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.747:0.013,0.226,0.761	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0.079:0.922,0.076,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.97:0.001,0.029,0.97	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.058:0.944,0.054,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	15635264	SNP-3.15633910.	C	A	.	PASS	AR2=1;DR2=1;AF=0.436	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.898:0,0.102,0.898	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15638394	SNP-3.15637040.	A	G	.	PASS	AR2=0.978;DR2=0.983;AF=0.514	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.862:0.008,0.122,0.87	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.824:0.006,0.164,0.83	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.56:0.069,0.302,0.629	1|1:2:0,0,1	1|1:1.794:0.011,0.185,0.804	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.693:0.019,0.269,0.712	0|0:0:1,0,0	1|1:1.803:0.01,0.177,0.813	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.717:0.017,0.25,0.733	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.685:0.019,0.277,0.704	1|1:1.76:0.014,0.211,0.775	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.779:0.012,0.196,0.792	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:1.753:0.018,0.211,0.771	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.786:0.012,0.189,0.799	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.765:0.014,0.207,0.779	1|1:1.808:0.008,0.176,0.816	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.805:0.01,0.176,0.814	0|1:1:0,1,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.831:0.008,0.154,0.839	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.663:0.021,0.295,0.684	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.823:0.018,0.14,0.841	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.717:0.019,0.244,0.736	0|0:0:1,0,0	1|1:1.959:0.001,0.038,0.96
+3	15638443	SNP-3.15637089.	C	A	.	PASS	AR2=1;DR2=1;AF=0.434	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15640372	SNP-3.15639018.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.45	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.05:0.951,0.049,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.035:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.075:0.926,0.073,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.03:0,0.97,0.03	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15641375	SNP-3.15640021.	C	A	.	PASS	AR2=0.99;DR2=0.991;AF=0.406	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.892:0.003,0.102,0.895	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.883:0.002,0.112,0.885	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.888:0.002,0.108,0.89	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.877:0.123,0.876,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.889:0.002,0.107,0.891	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.203:0.188,0.422,0.391	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.757:0.012,0.218,0.769	0|0:0:1,0,0	1|1:1.927:0.001,0.07,0.929	1|1:1.956:0,0.044,0.956	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.93:0.001,0.068,0.931	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.978:0,0.022,0.978	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.755:0.017,0.211,0.772	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.907:0.003,0.087,0.91	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.815:0.007,0.172,0.821	0|0:0:1,0,0
+3	15642911	SNP-3.15641557.	C	A	.	PASS	AR2=0.995;DR2=0.996;AF=0.29	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.835:0.001,0.163,0.836	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.565:0.021,0.392,0.587	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.761:0.002,0.236,0.763	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.019,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15644246	SNP-3.15642892.	C	A	.	PASS	AR2=0.968;DR2=0.978;AF=0.357	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.546:0.053,0.348,0.599	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.631:0.029,0.311,0.66	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.521:0.044,0.39,0.565	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.371:0.071,0.487,0.442	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.6:0.49,0.421,0.089	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.896:0.002,0.1,0.898	1|1:1.768:0.01,0.213,0.778	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.818:0.013,0.157,0.83	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.863:0.007,0.123,0.87	1|1:1.748:0.015,0.222,0.763	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.585:0.043,0.329,0.628	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1.546:0.053,0.348,0.599	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.546:0.053,0.348,0.599	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.546:0.053,0.348,0.599	1|1:1.791:0.016,0.178,0.806	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.79:0.016,0.179,0.806	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15645382	SNP-3.15644028.	C	A	.	PASS	AR2=0.997;DR2=0.998;AF=0.355	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.925:0.002,0.071,0.927	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.746:0.023,0.209,0.768	1|1:2:0,0,1	0|1:1.745:0.019,0.218,0.763	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	15648914	SNP-3.15647560.	C	A	.	PASS	AR2=1;DR2=1;AF=0.43	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15650573	SNP-3.15649219.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.44	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.119:0.89,0.1,0.009	0|0:0.042:0.959,0.039,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.93,0.07,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.932,0.068,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.01,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15651375	SNP-3.15650021.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.434	GT:DS:GP	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.958:0.001,0.041,0.959	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.059:0.944,0.054,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.958:0.001,0.041,0.958	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.873:0.005,0.118,0.877	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15661274	SNP-3.15659920.	A	G	.	PASS	AR2=0.915;DR2=0.935;AF=0.458	GT:DS:GP	1|0:1.374:0.105,0.416,0.479	0|0:0:1,0,0	1|1:1.387:0.08,0.452,0.468	1|1:1.585:0.045,0.325,0.63	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|1:1.379:0.065,0.49,0.444	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.265:0.136,0.464,0.4	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.57:0.06,0.311,0.63	1|1:1.739:0.025,0.21,0.765	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.524:0.056,0.363,0.581	0|0:0:1,0,0	1|1:1.008:0.256,0.48,0.264	1|1:2:0,0,1	0|1:1.106:0.22,0.454,0.326	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.855:0.005,0.134,0.861	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.954:0.068,0.91,0.022	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.743:0.017,0.224,0.76	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.692:0.016,0.277,0.707	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.707:0.021,0.251,0.728	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.518:0.505,0.471,0.024	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.854:0.006,0.134,0.86	0|0:0:1,0,0	1|1:1.792:0.013,0.183,0.804	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.944:0.114,0.829,0.057	1|1:2:0,0,1	1|0:0.87:0.213,0.705,0.083	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.663:0.029,0.279,0.692	1|1:1.726:0.019,0.236,0.745	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.319:0.692,0.297,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.722:0.018,0.241,0.741	1|1:1.703:0.029,0.239,0.732	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.763:0.019,0.198,0.782	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.544:0.052,0.352,0.596	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.536:0.055,0.355,0.591	1|1:1.59:0.041,0.328,0.631	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.745:0.016,0.224,0.76	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.68:0.027,0.265,0.708	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.063:0.185,0.567,0.248	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.556:0.032,0.379,0.588	1|1:1.937:0.003,0.056,0.94	0|0:0:1,0,0	0|1:1.409:0.088,0.416,0.497	0|0:0:1,0,0	1|1:1.589:0.043,0.325,0.632	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.489:0.086,0.339,0.575	1|1:1.56:0.047,0.346,0.607	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.454:0.071,0.405,0.524	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.52:0.06,0.359,0.58	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.048:0.953,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.315:0.719,0.248,0.033	0|0:0:1,0,0	1|0:0.732:0.349,0.57,0.081	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.792:0.013,0.183,0.804	1|1:1.792:0.013,0.183,0.804	1|1:2:0,0,1	1|1:1.796:0.016,0.173,0.812	1|1:1.792:0.013,0.183,0.804	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.723:0.017,0.242,0.74	1|1:2:0,0,1	1|1:1.576:0.049,0.327,0.624	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.779:0.019,0.183,0.798	1|1:1.695:0.035,0.236,0.73	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.488:0.081,0.349,0.569	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.299:0.705,0.29,0.004	1|1:2:0,0,1
+3	15663019	SNP-3.15661665.	C	A	.	PASS	AR2=0.998;DR2=0.999;AF=0.445	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.625:0,0.374,0.626	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15665019	SNP-3.15663665.	C	A	.	PASS	AR2=1;DR2=1;AF=0.436	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.001:0,0.999,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0.053:0.947,0.053,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15665154	SNP-3.15663800.	C	A	.	PASS	AR2=1;DR2=1;AF=0.438	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15667170	SNP-3.15665816.	C	A	.	PASS	AR2=0.992;DR2=0.994;AF=0.431	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	1|0:1.004:0.009,0.978,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.154:0.847,0.151,0.002	1|0:1.357:0.107,0.43,0.463	1|0:1:0,1,0	1|1:1.563:0.037,0.364,0.6	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.944,0.055,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0.046:0.954,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.99:0,0.009,0.99	1|1:2:0,0,1	0|0:0.047:0.954,0.046,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.029:0.971,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.043:0.958,0.042,0.001	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15669666	SNP-3.15668312.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.438	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.941,0.059,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.91:0.003,0.085,0.912	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.94:0.001,0.058,0.941	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.073:0.928,0.071,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15670928	SNP-3.15669574.	C	A	.	PASS	AR2=0.986;DR2=0.988;AF=0.32	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.942:0.001,0.056,0.943	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.95:0.001,0.049,0.951	1|1:1.939:0.001,0.059,0.94	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.947:0.001,0.051,0.948	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.923,0.074,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.113:0.89,0.108,0.002	0|0:0:1,0,0	0|0:0.081:0.92,0.079,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.399:0.601,0.399,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.112:0.896,0.097,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.167:0.844,0.146,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0.062:0.938,0.062,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.171:0.831,0.167,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.062:0.939,0.059,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.125:0.879,0.118,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.027,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.03:0.97,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.254:0.763,0.221,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.944:0.001,0.054,0.945	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.158:0.852,0.139,0.009	0|0:0:1,0,0	0|0:0.034:0.967,0.032,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0.074:0.93,0.065,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.961,0.039,0	0|0:0.009:0.991,0.009,0	0|0:0.022:0.978,0.022,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.047:0.953,0.046,0.001	1|1:2:0,0,1	0|0:0.027:0.973,0.026,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.178:0.831,0.159,0.009	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.207:0.806,0.181,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.984,0.016,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15671045	SNP-3.15669691.	C	A	.	PASS	AR2=0.977;DR2=0.984;AF=0.279	GT:DS:GP	0|0:0:1,0,0	1|1:1.926:0.002,0.07,0.928	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.959:0,0.041,0.959	1|1:1.968:0,0.032,0.968	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.596:0.073,0.259,0.669	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.342:0.083,0.492,0.425	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.669:0.009,0.312,0.678	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.867:0,0.132,0.868	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.82:0.002,0.175,0.823	0|0:0:1,0,0	1|1:1.7:0.004,0.292,0.704	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.94:0.001,0.058,0.941	0|0:0:1,0,0	1|1:1.882:0,0.118,0.882	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.324:0.154,0.369,0.477	0|0:0:1,0,0	1|1:1.989:0,0.011,0.989	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.317:0.096,0.491,0.413	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.935:0.001,0.063,0.936	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.445:0.096,0.362,0.541	0|0:0:1,0,0
+3	15672470	SNP-3.15671116.	C	A	.	PASS	AR2=1;DR2=1;AF=0.438	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.033:0.968,0.032,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15674475	SNP-3.15673121.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.303	GT:DS:GP	0|0:0:1,0,0	1|1:1.973:0,0.026,0.973	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.011,0.989	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.966:0,0.034,0.966	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0
+3	15675533	SNP-3.15674179.	C	A	.	PASS	AR2=0.993;DR2=0.994;AF=0.297	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.964:0,0.036,0.964	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.957,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.042:0.959,0.041,0	0|1:1:0,1,0	1|1:1.977:0.001,0.022,0.977	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.938:0,0.062,0.938	1|1:2:0,0,1	1|1:1.944:0.001,0.054,0.945	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.953:0,0.047,0.953	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.977:0,0.023,0.977	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.857:0.003,0.137,0.86	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.577:0.001,0.422,0.577	0|0:0:1,0,0	1|1:1.883:0.003,0.111,0.886	1|1:1.885:0.003,0.108,0.889	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.023:0.977,0.022,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.955:0.001,0.043,0.956	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.944:0.001,0.053,0.945	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.893:0.002,0.103,0.895	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.897:0.003,0.097,0.9	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15678560	SNP-3.15677206.	A	G	.	PASS	AR2=0.879;DR2=0.916;AF=0.298	GT:DS:GP	0|0:0.612:0.49,0.408,0.102	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.017:0.191,0.6,0.208	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.776:0.39,0.444,0.166	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0.398:0.663,0.277,0.061	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.47:0.568,0.394,0.038	1|1:1.577:0.056,0.312,0.632	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.364:0.662,0.312,0.026	0|0:0.331:0.669,0.331,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.274:0.157,0.411,0.432	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.19:0.148,0.514,0.338	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.187:0.818,0.177,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.205:0.8,0.195,0.005	0|0:0:1,0,0	0|1:0.782:0.392,0.435,0.173	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.142:0.861,0.137,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.784:0.314,0.587,0.099	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.605:0.003,0.389,0.608	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.067:0.934,0.065,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.444:0.569,0.418,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.449:0.613,0.325,0.062	1|0:0.582:0.484,0.45,0.066	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.509:0.547,0.396,0.056	0|0:0.21:0.802,0.186,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.619:0.511,0.359,0.13	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.45:0.076,0.397,0.527	1|0:0.621:0.477,0.424,0.099	0|0:0.541:0.537,0.386,0.077	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.568:0.521,0.39,0.089	0|1:0.611:0.446,0.497,0.057	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.849:0.359,0.433,0.208	1|1:2:0,0,1	0|0:0.19:0.81,0.19,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.585:0.5,0.414,0.085	0|0:0:1,0,0	0|0:0.466:0.579,0.376,0.045	1|0:1.356:0.092,0.459,0.449	0|1:0.543:0.521,0.414,0.064	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.626:0.401,0.571,0.027	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.677:0.421,0.481,0.098	0|0:0:1,0,0	1|0:0.813:0.253,0.681,0.066	0|0:0:1,0,0	1|1:1.774:0.025,0.176,0.799	1|1:1.601:0.048,0.302,0.649	1|1:1.308:0.145,0.402,0.453	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.202:0.819,0.161,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.619:0.484,0.413,0.103	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.207:0.176,0.441,0.383	0|0:0.181:0.86,0.099,0.041	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.532:0.524,0.42,0.056	0|0:0:1,0,0	0|0:0.027:0.974,0.026,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.32:0.742,0.196,0.062	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.375:0.64,0.344,0.016	1|1:2:0,0,1	1|0:0.625:0.441,0.493,0.066	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	15678743	SNP-3.15677389.	C	A	.	PASS	AR2=0.995;DR2=0.996;AF=0.281	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.837:0.005,0.152,0.843	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.946:0.001,0.052,0.947	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.947:0.001,0.051,0.948	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.775:0.013,0.198,0.789	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.845:0.006,0.143,0.851	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.836:0.007,0.151,0.843	0|0:0:1,0,0
+3	15679056	SNP-3.15677702.	C	A	.	PASS	AR2=0.986;DR2=0.988;AF=0.346	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.229:0.785,0.201,0.014	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.242:0.773,0.212,0.015	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.282:0.74,0.239,0.022	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0.326:0.701,0.271,0.027	1|0:1:0,1,0	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.958,0.042,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.955,0.045,0	0|0:0.318:0.707,0.267,0.025	1|0:1:0,1,0	0|0:0.104:0.897,0.103,0.001	0|0:0.217:0.794,0.194,0.011	0|0:0:1,0,0	0|0:0.207:0.801,0.192,0.007	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0.016:0.984,0.015,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.974:0,0.026,0.974	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.986:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.155:0.855,0.136,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.037:0.963,0.037,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.936,0.063,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.082:0.92,0.079,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.14:0.862,0.136,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.125:0.881,0.114,0.006	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.04:0.961,0.039,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15680226	SNP-3.15678872.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.437	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.088:0.006,0.9,0.094	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.942,0.057,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.115:0.887,0.111,0.002	0|1:1:0,1,0	0|0:0.074:0.928,0.07,0.002	0|0:0.084:0.918,0.08,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.063:0.938,0.061,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.937,0.062,0.001	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.97:0,0.03,0.97	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.239:0.125,0.511,0.364	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.849:0.004,0.143,0.853	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.971,0.029,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.941,0.058,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15683355	SNP-3.15682001.	C	A	.	PASS	AR2=0.989;DR2=0.99;AF=0.454	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.035:0.965,0.035,0	0|0:0.023:0.977,0.022,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.163:0.848,0.141,0.011	1|1:1.829:0.006,0.158,0.835	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.029:0.971,0.029,0	0|0:0.075:0.927,0.071,0.002	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.903:0.003,0.09,0.907	0|0:0:1,0,0	0|0:0.121:0.88,0.12,0.001	1|1:2:0,0,1	0|0:0.16:0.853,0.133,0.014	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.951,0.049,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.959,0.041,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0.146:0.867,0.12,0.013	0|0:0:1,0,0	0|0:0.26:0.763,0.214,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0.147:0.865,0.122,0.013	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0.011:0.989,0.01,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.14:0.865,0.131,0.004	1|1:2:0,0,1	0|0:0.115:0.886,0.113,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.014:0.986,0.014,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.134:0.868,0.13,0.002	0|0:0.163:0.839,0.159,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.041:0.96,0.039,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.055:0.947,0.051,0.002	0|0:0.048:0.953,0.047,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	0|0:0.026:0.974,0.026,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.961,0.039,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.154:0.848,0.15,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.038:0.963,0.036,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.006,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15684816	SNP-3.15683462.	A	G	.	PASS	AR2=0.979;DR2=0.982;AF=0.199	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.135:0.872,0.121,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.941,0.058,0.001	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.226:0.787,0.199,0.014	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.186:0.821,0.171,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.155:0.851,0.143,0.006	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.18:0.827,0.166,0.007	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.043:0.957,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.746:0.271,0.711,0.017	0|0:0.016:0.984,0.016,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.342:0.689,0.281,0.031	0|0:0.081:0.921,0.077,0.002	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.094:0.909,0.089,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.94,0.058,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.167:0.841,0.152,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.223:0.787,0.203,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.196:0.806,0.191,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.117:0.886,0.111,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.133:0.876,0.116,0.009	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.152:0.854,0.141,0.005	0|1:1:0,1,0	0|0:0:1,0,0
+3	15685034	SNP-3.15683680.	C	A	.	PASS	AR2=0.989;DR2=0.992;AF=0.427	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	0|0:0.324:0.678,0.32,0.002	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.981:0,0.019,0.981	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.158:0.853,0.136,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.919:0.087,0.906,0.007	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.016:0.984,0.016,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.978:0.032,0.958,0.01	0|1:0.936:0.127,0.811,0.062	1|1:1.587:0.01,0.393,0.597	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.764:0.242,0.752,0.006	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.454:0.002,0.543,0.456	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.891:0.001,0.107,0.892	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.141:0.868,0.122,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.948,0.052,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.988:0,0.011,0.989	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.976:0.001,0.023,0.977	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.098:0.908,0.087,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.948:0.001,0.05,0.949	0|0:0:1,0,0
+3	15685344	SNP-3.15683990.	C	A	.	PASS	AR2=0.99;DR2=0.993;AF=0.342	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.762:0.427,0.383,0.19	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.943,0.054,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.109:0.894,0.103,0.003	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.924:0.109,0.858,0.033	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.959,0.041,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.963:0.001,0.035,0.964	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.97:0,0.03,0.97	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.029:0.972,0.028,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.155:0.184,0.477,0.339	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.958,0.042,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.958:0.001,0.04,0.959	0|0:0:1,0,0
+3	15686242	SNP-3.15684888.	C	A	.	PASS	AR2=0.997;DR2=0.998;AF=0.296	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.766:0.001,0.232,0.767	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.265:0,0.734,0.266	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.984:0,0.016,0.984	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15695215	SNP-3.15693861.	C	A	.	PASS	AR2=0.993;DR2=0.995;AF=0.483	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.254:0.754,0.238,0.008	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.874:0.012,0.103,0.885	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.803:0.013,0.171,0.816	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.297:0.189,0.325,0.486	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15695269	SNP-3.15693915.	C	A	.	PASS	AR2=0.992;DR2=0.995;AF=0.494	GT:DS:GP	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.208:0.796,0.2,0.004	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.137:0.865,0.132,0.002	1|1:1.826:0,0.173,0.827	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|1:1.305:0.061,0.573,0.366	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.653:0.352,0.643,0.005	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.009:0,0.991,0.009	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|0:0.503:0.497,0.503,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.967:0,0.033,0.967	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15696808	SNP-3.15695454.	A	G	.	PASS	AR2=0.98;DR2=0.985;AF=0.41	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.724:0.427,0.422,0.151	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.23:0.802,0.166,0.032	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.783:0.369,0.478,0.152	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.054:0.947,0.052,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.827:0.173,0.827,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.955,0.045,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.286:0.719,0.276,0.005	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.08:0.921,0.079,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.538:0.048,0.366,0.586	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.631:0.053,0.263,0.684	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.917:0.283,0.516,0.201	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.936,0.063,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.761:0.375,0.488,0.137	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15702651	SNP-3.15701297.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.482	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.698:0,0.301,0.698	0|0:0:1,0,0	0|0:0.167:0.833,0.167,0	1|1:2:0,0,1	1|1:1.907:0.001,0.09,0.908	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.937:0.002,0.059,0.939	1|1:1.958:0,0.041,0.959	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.934:0.002,0.062,0.936	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.324:0.676,0.324,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.994:0.007,0.992,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.95:0.001,0.049,0.95	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.873:0.004,0.119,0.877	1|1:2:0,0,1	1|1:1.916:0.003,0.078,0.919	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.954:0.001,0.044,0.955	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.917:0.003,0.078,0.919	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15703264	SNP-3.15701910.	A	G	.	PASS	AR2=0.946;DR2=0.961;AF=0.242	GT:DS:GP	0|0:0.278:0.743,0.236,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.134:0.871,0.125,0.005	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.317:0.712,0.258,0.03	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.836:0.009,0.146,0.845	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.433:0.632,0.304,0.064	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.233:0.78,0.208,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.151:0.855,0.139,0.006	0|0:0.257:0.757,0.229,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.083:0.288,0.341,0.371	0|0:0:1,0,0	0|0:0.219:0.794,0.194,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.235:0.792,0.18,0.028	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.312:0.712,0.263,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.262:0.776,0.187,0.038	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.333:0.696,0.276,0.028	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.064:0.937,0.062,0.001	0|0:0.346:0.676,0.301,0.022	0|0:0:1,0,0	0|0:0.317:0.709,0.266,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0.199:0.827,0.146,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.355:0.677,0.29,0.033	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.328:0.698,0.277,0.025	0|1:1:0,1,0	0|0:0.319:0.704,0.273,0.023	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.306:0.718,0.257,0.024	1|0:1:0,1,0	0|0:0.287:0.733,0.247,0.02	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15704365	SNP-3.15703011.	C	A	.	PASS	AR2=0.985;DR2=0.99;AF=0.271	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.562:0.049,0.339,0.611	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.458:0.083,0.376,0.541	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.92:0.002,0.076,0.922	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.898:0.003,0.097,0.9	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.969:0,0.03,0.97	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.943:0.001,0.056,0.943	1|1:2:0,0,1	1|1:1.78:0.013,0.195,0.793	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1.444:0.018,0.52,0.462	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.859:0.005,0.132,0.863	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.646:0.036,0.282,0.682	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15705364	SNP-3.15704010.	C	A	.	PASS	AR2=0.965;DR2=0.971;AF=0.458	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.949:0,0.051,0.949	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.746:0,0.254,0.746	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.85:0.009,0.132,0.859	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.776:0.026,0.171,0.803	0|0:0.275:0.743,0.24,0.018	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.322:0.702,0.275,0.024	0|0:0.251:0.765,0.218,0.017	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.248:0.763,0.226,0.011	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.221:0.79,0.199,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.97:0,0.03,0.97	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.199:0.808,0.185,0.007	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.388:0.642,0.328,0.03	0|0:0.205:0.807,0.182,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.137:0.865,0.132,0.003	0|0:0.165:0.84,0.155,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.151:0.853,0.143,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.138:0.868,0.126,0.006	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.175:0.834,0.158,0.008	0|0:0:1,0,0	0|0:0.123:0.881,0.115,0.004	1|1:2:0,0,1	0|0:0.123:0.882,0.112,0.006	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.271:0.748,0.233,0.019	1|1:2:0,0,1	0|0:0.265:0.756,0.224,0.02	1|1:2:0,0,1	1|1:1.927:0.001,0.07,0.929	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.089:0.915,0.082,0.003	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.234:0.781,0.203,0.015	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.214:0.799,0.187,0.013	0|0:0:1,0,0	0|0:0.153:0.856,0.135,0.009	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.439:0.588,0.384,0.028	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.869:0.003,0.126,0.872	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.727:0.008,0.258,0.735	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.3:0.721,0.259,0.02	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.108:0.895,0.103,0.003	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.113:0.889,0.11,0.002	0|0:0.285:0.733,0.249,0.018	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.371:0.657,0.315,0.028	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.167:0.839,0.155,0.006	0|0:0.16:0.849,0.142,0.009	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.933,0.064,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.061:0.943,0.052,0.005	0|0:0.052:0.952,0.045,0.003	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.354:0.676,0.295,0.029	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15707329	SNP-3.15705975.	C	A	.	PASS	AR2=0.978;DR2=0.981;AF=0.451	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.176:0.833,0.159,0.008	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.969:0.001,0.03,0.97	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.599:0.137,0.127,0.736	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.17:0.838,0.154,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.242:0.772,0.214,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.163:0.843,0.15,0.006	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.294:0.73,0.247,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.939,0.059,0.002	0|0:0:1,0,0	0|0:0.214:0.798,0.19,0.012	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.161:0.845,0.149,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.092:0.911,0.085,0.003	1|1:2:0,0,1	1|0:1.036:0,0.964,0.036	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.141:0.865,0.129,0.006	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.234:0.78,0.206,0.014	0|0:0:1,0,0	0|0:0.166:0.841,0.151,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.239:0.774,0.213,0.013	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.163:0.843,0.152,0.006	0|0:0.326:0.706,0.262,0.032	0|0:0.043:0.959,0.039,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.167:0.836,0.161,0.003	0|0:0:1,0,0	0|0:0.168:0.84,0.153,0.007	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.248:0.766,0.219,0.014	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.023:0.978,0.022,0	1|1:2:0,0,1	0|0:0.01:0.99,0.01,0	0|0:0.022:0.978,0.022,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.221:0.792,0.194,0.013	0|0:0.071:0.932,0.065,0.003	0|0:0.327:0.706,0.262,0.032	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.032:0.969,0.029,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15710789	SNP-3.15709435.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.42	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.843:0.001,0.156,0.844	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.974:0.001,0.025,0.975	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15711523	SNP-3.15710169.	C	A	.	PASS	AR2=0.986;DR2=0.99;AF=0.389	GT:DS:GP	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.932:0.001,0.066,0.933	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.933:0.001,0.064,0.935	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.361:0.081,0.478,0.441	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.898:0.001,0.1,0.899	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.899:0.003,0.096,0.902	1|0:0.698:0.41,0.481,0.108	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.454:0.598,0.349,0.052	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.454:0.598,0.349,0.052	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.454:0.598,0.349,0.052	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.039:0.963,0.035,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.963:0.001,0.036,0.964	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	15712612	SNP-3.15711258.	C	A	.	PASS	AR2=1;DR2=1;AF=0.426	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.001:0,0.999,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15712766	SNP-3.15711412.	C	A	.	PASS	AR2=0.98;DR2=0.984;AF=0.284	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.868:0.006,0.121,0.874	1|1:1.609:0.019,0.352,0.628	0|0:0.073:0.929,0.07,0.001	0|0:0.047:0.953,0.047,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.123:0.881,0.115,0.004	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.078:0.925,0.072,0.003	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.154:0.851,0.144,0.005	0|0:0.154:0.851,0.144,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.98:0,0.019,0.98	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.858:0.005,0.133,0.862	0|0:0:1,0,0	0|0:0.038:0.962,0.038,0	1|1:2:0,0,1	0|1:0.823:0.177,0.823,0	1|1:1.585:0.019,0.376,0.604	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.675:0.014,0.298,0.689	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.89:0.146,0.819,0.036	1|1:2:0,0,1	0|0:0.044:0.956,0.043,0	1|1:1.609:0.002,0.387,0.611	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.071:0.93,0.069,0.001	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.053:0.948,0.05,0.001	0|0:0.143:0.863,0.132,0.005	0|0:0:1,0,0	0|0:0.076:0.926,0.072,0.002	0|0:0.069:0.931,0.069,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.989:0,0.011,0.989	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.124:0.88,0.115,0.004	0|0:0:1,0,0	0|0:0.079:0.924,0.073,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.962,0.038,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.828:0.008,0.155,0.837	0|0:0:1,0,0
+3	15714336	SNP-3.15712982.	C	A	.	PASS	AR2=1;DR2=1;AF=0.288	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:0.998:0.002,0.998,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15716353	SNP-3.15714999.	C	A	.	PASS	AR2=1;DR2=1;AF=0.294	GT:DS:GP	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15717090	SNP-3.15715736.	C	A	.	PASS	AR2=0.997;DR2=0.998;AF=0.455	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.951,0.048,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.157:0.854,0.135,0.011	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.094:0.91,0.087,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.95,0.049,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.186:0.816,0.182,0.002	0|0:0.078:0.924,0.075,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15718646	SNP-3.15717292.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.448	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.116:0.888,0.108,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.133:0.874,0.119,0.007	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15719030	SNP-3.15717676.	C	A	.	PASS	AR2=1;DR2=1;AF=0.428	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15720172	SNP-3.15718818.	A	G	.	PASS	AR2=0.99;DR2=0.992;AF=0.29	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:1.508:0.008,0.476,0.516	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.202:0.815,0.168,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.956,0.043,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.078:0.923,0.075,0.002	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0.015:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.072:0.929,0.069,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.11:0.894,0.101,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.031:0.011,0.947,0.042	0|0:0:1,0,0	0|0:0.079:0.923,0.075,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.595:0.405,0.595,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.047:0.954,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.028,0.972	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.101:0.901,0.097,0.002	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.149:0.851,0.149,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15720536	SNP-3.15719182.	A	G	.	PASS	AR2=0.98;DR2=0.985;AF=0.256	GT:DS:GP	0|0:0.11:0.894,0.102,0.004	0|0:0:1,0,0	0|1:0.568:0.465,0.502,0.033	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.953:0,0.047,0.953	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.958:0.001,0.039,0.96	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.154:0.853,0.14,0.007	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.339:0.698,0.266,0.036	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.829:0.002,0.166,0.832	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.106:0.897,0.1,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.15:0.854,0.141,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.246:0.77,0.214,0.016	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.1:0.905,0.091,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.125:0.883,0.109,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.229:0.784,0.202,0.013	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.443:0.038,0.481,0.481	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.966:0,0.033,0.967	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.199:0.808,0.186,0.007	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.134:0.87,0.126,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.112:0.891,0.106,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15720660	SNP-3.15719306.	A	G	.	PASS	AR2=0.998;DR2=0.999;AF=0.495	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.635:0.366,0.634,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.009:0.006,0.979,0.015	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15720901	SNP-3.15719547.	C	A	.	PASS	AR2=0.998;DR2=0.999;AF=0.285	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.634:0,0.366,0.634	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15720951	SNP-3.15719597.	A	G	.	PASS	AR2=0.983;DR2=0.986;AF=0.291	GT:DS:GP	0|0:0.041:0.96,0.039,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.968,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.854:0.006,0.134,0.86	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.49:0.058,0.394,0.548	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.944:0.004,0.048,0.948	0|1:0.618:0.407,0.568,0.025	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.08:0.923,0.075,0.003	0|0:0.066:0.935,0.064,0.001	0|0:0:1,0,0	0|0:0.063:0.938,0.061,0.001	0|0:0.067:0.934,0.065,0.001	0|0:0.041:0.959,0.04,0	0|0:0.055:0.946,0.053,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.959,0.041,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.968,0.032,0	0|0:0.028:0.972,0.028,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.947:0.001,0.05,0.948	0|0:0.043:0.957,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.97,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.941,0.058,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.037:0,0.963,0.037	0|0:0:1,0,0	0|0:0.086:0.917,0.08,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.968:0.04,0.953,0.007	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.49:0,0.51,0.49	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.027,0.973	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.976:0.001,0.023,0.976	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.943:0.001,0.054,0.945	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.971:0,0.029,0.971	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.208:0.8,0.192,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.053:0.949,0.05,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.967:0,0.033,0.967	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.952,0.047,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.964:0.001,0.034,0.965	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.251:0.755,0.238,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15722768	SNP-3.15721414.	A	G	.	PASS	AR2=0.97;DR2=0.982;AF=0.485	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:0.63:0.469,0.432,0.099	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.843:0.306,0.544,0.15	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.631:0.469,0.432,0.1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.44:0.025,0.51,0.465	0|0:0:1,0,0	0|0:0.54:0.541,0.379,0.08	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.643:0.46,0.436,0.104	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.947:0.001,0.052,0.947	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.71:0.404,0.483,0.113	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.643:0.46,0.436,0.104	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.633:0.467,0.432,0.1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.643:0.46,0.436,0.104	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15722844	SNP-3.15721490.	A	G	.	PASS	AR2=0.991;DR2=0.992;AF=0.254	GT:DS:GP	0|0:0.066:0.936,0.063,0.001	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.053:0.948,0.051,0.001	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.038:0.962,0.038,0	0|0:0.045:0.955,0.045,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.957,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.083:0.919,0.079,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.032:0.968,0.031,0	0|0:0.09:0.912,0.086,0.002	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.069:0.933,0.066,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.075:0.927,0.072,0.002	0|0:0:1,0,0	0|0:0.082:0.92,0.078,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.02:0,0.98,0.02	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.05:0.951,0.049,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.074:0.928,0.071,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.092:0.91,0.088,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.013:0.987,0.012,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.083:0.919,0.08,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.628:0.079,0.213,0.707	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.937,0.061,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15723092	SNP-3.15721738.	C	A	.	PASS	AR2=0.993;DR2=0.994;AF=0.448	GT:DS:GP	0|0:0.01:0.99,0.01,0	1|1:2:0,0,1	0|0:0.052:0.948,0.051,0	0|0:0.023:0.977,0.023,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.14:0.866,0.128,0.006	0|0:0.119:0.887,0.107,0.006	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.674:0.002,0.321,0.676	0|0:0:1,0,0	0|0:0.03:0.971,0.028,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.133:0.872,0.122,0.005	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.136:0.866,0.131,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.957,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.941,0.058,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.111:0.889,0.111,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.955,0.044,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.004:0,0.996,0.004	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.038:0.962,0.037,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.029:0.971,0.028,0.001	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.967,0.033,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.047:0.953,0.046,0.001	1|1:2:0,0,1	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.318:0.683,0.316,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15725488	SNP-3.15724134.	C	A	.	PASS	AR2=1;DR2=1;AF=0.302	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.021:0.979,0.021,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15726847	SNP-3.15725493.	C	A	.	PASS	AR2=1;DR2=1;AF=0.444	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15729319	SNP-3.15727965.	C	A	.	PASS	AR2=1;DR2=1;AF=0.43	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.98:0,0.02,0.98	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15729443	SNP-3.15728089.	C	A	.	PASS	AR2=1;DR2=1;AF=0.296	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15730077	SNP-3.15728723.	C	A	.	PASS	AR2=0.997;DR2=0.998;AF=0.427	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.969:0,0.031,0.969	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:1.967:0.001,0.03,0.968	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:1.972:0.001,0.026,0.973	1|1:1.695:0.019,0.268,0.714	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.818:0.01,0.162,0.828	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.97:0,0.029,0.97	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15730296	SNP-3.15728942.	C	A	.	PASS	AR2=0.997;DR2=0.998;AF=0.441	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.937:0.001,0.062,0.937	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.933:0.001,0.066,0.934	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.948,0.052,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.962:0,0.038,0.962	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.954,0.045,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.906:0.002,0.09,0.908	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.975,0.025,0	1|1:1.895:0.001,0.102,0.897	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.89:0.003,0.103,0.893	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15732998	SNP-3.15731644.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.413	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.311:0.086,0.516,0.398	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15733340	SNP-3.15731986.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.431	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.942,0.057,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.03:0.97,0.03,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.04:0.96,0.039,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.962,0.038,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.055:0.946,0.052,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.029:0.971,0.029,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.97,0.03,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.014:0.986,0.014,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.989,0.011,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15736711	SNP-3.15735357.	C	A	.	PASS	AR2=1;DR2=1;AF=0.268	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15740027	SNP-3.15738673.	C	A	.	PASS	AR2=0.983;DR2=0.987;AF=0.32	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.131:0.873,0.122,0.005	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.23:0.786,0.198,0.016	0|0:0:1,0,0	0|0:0.079:0.923,0.074,0.002	0|1:1:0,1,0	0|0:0.536:0.492,0.48,0.028	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.093:0.909,0.088,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.103:0.9,0.097,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.932,0.067,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.207:0.808,0.176,0.016	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.216:0.791,0.203,0.007	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.106:0.897,0.1,0.003	0|0:0.013:0.987,0.013,0	0|0:0.117:0.886,0.111,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.113:0.889,0.108,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.94,0.059,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0.285:0.739,0.237,0.024	0|0:0.044:0.956,0.044,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.937,0.062,0.002	0|1:0.471:0.539,0.45,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.12:0.884,0.112,0.004	0|0:0.124:0.881,0.115,0.004	0|0:0.107:0.897,0.1,0.004	1|1:2:0,0,1	0|0:0:1,0,0
+3	15741078	SNP-3.15739724.	C	A	.	PASS	AR2=0.997;DR2=0.997;AF=0.277	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	0|0:0.036:0.964,0.035,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.964,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.968,0.031,0	0|0:0.129:0.872,0.128,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.946,0.054,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0.031:0.97,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.952:0,0.047,0.953	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.95,0.048,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.975,0.025,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	15742728	SNP-3.15741374.	C	A	.	PASS	AR2=0.997;DR2=0.998;AF=0.442	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.959,0.041,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.048:0.953,0.047,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.05:0.95,0.049,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.07:0.931,0.068,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.046:0.955,0.045,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.959,0.041,0.001	0|0:0:1,0,0	1|0:0.717:0.295,0.693,0.012	0|0:0.025:0.976,0.024,0	1|1:1.945:0.003,0.05,0.947	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15743490	SNP-3.15742136.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.418	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.069:0.034,0.863,0.103	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.795:0.002,0.201,0.797	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15744367	SNP-3.15743013.	C	A	.	PASS	AR2=0.991;DR2=0.992;AF=0.469	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.169:0.841,0.15,0.01	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.179:0.83,0.16,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.195:0.812,0.181,0.007	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.11:0.893,0.103,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.933,0.066,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.146:0.002,0.851,0.148	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.168:0.841,0.149,0.009	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.21:0.803,0.183,0.014	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.072:0.929,0.07,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.094:0.907,0.091,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.169:0.838,0.156,0.007	1|1:2:0,0,1	0|0:0.171:0.838,0.152,0.01	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.08:0.921,0.078,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.968,0.032,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.179:0.828,0.165,0.007	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.046:0.954,0.045,0.001
+3	15745506	SNP-3.15744152.	C	A	.	PASS	AR2=0.985;DR2=0.988;AF=0.463	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.144:0.861,0.134,0.005	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.807:0,0.192,0.808	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.176:0.826,0.171,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.612:0.414,0.559,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.92,0.079,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.207:0.815,0.163,0.022	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.348:0,0.652,0.348	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.136:0.868,0.127,0.005	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.056:0.945,0.055,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0.209:0.799,0.192,0.009	0|0:0.193:0.816,0.175,0.009	0|0:0:1,0,0	0|0:0.541:0.498,0.463,0.039	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.161:0.844,0.152,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.081:0.919,0.08,0.001	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.155:0.85,0.145,0.005	0|0:0:1,0,0	0|0:0.092:0.91,0.089,0.001	0|0:0.146:0.858,0.137,0.004	0|0:0.046:0.955,0.044,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15748572	SNP-3.15747218.	C	A	.	PASS	AR2=1;DR2=1;AF=0.263	GT:DS:GP	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15750549	SNP-3.15749195.	C	A	.	PASS	AR2=1;DR2=1;AF=0.27	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15751111	SNP-3.15749757.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.277	GT:DS:GP	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.936,0.063,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15751427	SNP-3.15750073.	C	A	.	PASS	AR2=1;DR2=1;AF=0.27	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15762346	SNP-3.15760992.	C	A	.	PASS	AR2=0.988;DR2=0.99;AF=0.46	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.113:0.892,0.104,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.118:0.885,0.112,0.003	0|0:0.072:0.93,0.069,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.946,0.054,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.068:0.933,0.066,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.905,0.093,0.002	0|0:0.092:0.91,0.088,0.002	0|1:1.18:0,0.82,0.18	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.159:0.848,0.145,0.007	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.133:0.871,0.125,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.099:0.903,0.094,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.263:0.747,0.243,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.123:0.879,0.118,0.003	0|0:0:1,0,0	0|0:0.4:0.612,0.376,0.012	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.039:0.961,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.084:0.918,0.081,0.002	0|0:0:1,0,0	1|1:1.714:0,0.286,0.714	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.082:0.919,0.079,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.035:0.966,0.034,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.114:0.89,0.106,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.078:0.923,0.075,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.108:0.895,0.102,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15763066	SNP-3.15761712.	C	A	.	PASS	AR2=1;DR2=1;AF=0.432	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15764011	SNP-3.15762657.	A	G	.	PASS	AR2=0.981;DR2=0.984;AF=0.229	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.391:0.634,0.34,0.026	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.223:0.789,0.199,0.012	0|0:0.13:0.874,0.121,0.004	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.104:0.899,0.099,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.116:0.888,0.109,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.143:0.862,0.133,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.141:0.864,0.131,0.005	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.05:0.95,0.05,0	0|0:0.173:0.833,0.161,0.006	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.181:0.822,0.174,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.157:0.848,0.147,0.005	0|1:1.149:0.003,0.845,0.152	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.256:0.761,0.222,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.089:0.912,0.088,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.109:0.894,0.102,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.184:0.824,0.168,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.112:0.888,0.111,0	0|0:0:1,0,0
+3	15766609	SNP-3.15765255.	C	A	.	PASS	AR2=0.957;DR2=0.969;AF=0.398	GT:DS:GP	0|0:0:1,0,0	1|1:1.785:0.015,0.185,0.8	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.671:0.029,0.271,0.7	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.646:0.017,0.32,0.663	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.868:0.002,0.127,0.87	1|1:2:0,0,1	1|1:1.92:0.001,0.077,0.922	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.921:0.002,0.076,0.922	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.871:0,0.129,0.871	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.431:0.079,0.411,0.51	1|1:1.778:0.014,0.194,0.792	0|0:0:1,0,0	0|1:1.443:0.074,0.41,0.516	1|0:1.483:0.058,0.401,0.541	1|1:1.447:0.075,0.403,0.522	1|1:1.557:0.038,0.366,0.595	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.93:0.001,0.068,0.931	1|1:1.613:0.032,0.324,0.644	1|1:1.632:0.032,0.303,0.664	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.37:0.089,0.452,0.459	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.724:0.006,0.264,0.73	0|0:0.016:0.984,0.016,0	1|1:1.577:0.038,0.347,0.615	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.651:0.051,0.247,0.702	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.774:0.01,0.206,0.784	1|1:1.921:0,0.079,0.921	0|0:0:1,0,0	1|1:1.891:0.001,0.107,0.892	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.847:0.006,0.14,0.853	1|1:1.787:0.009,0.196,0.796	1|1:1.973:0,0.026,0.973	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.925:0.001,0.073,0.926	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.947:0.001,0.051,0.948	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.767:0.01,0.213,0.777	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.52:0.052,0.375,0.573	1|1:2:0,0,1	1|1:1.856:0.004,0.137,0.859	1|1:1.953:0,0.047,0.953	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.777:0.009,0.205,0.786	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|1:1.828:0.005,0.162,0.833	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.965:0.001,0.033,0.966	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.927:0.001,0.07,0.929	1|1:1.676:0.03,0.263,0.707	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15766800	SNP-3.15765446.	C	A	.	PASS	AR2=0.929;DR2=0.95;AF=0.364	GT:DS:GP	0|0:0:1,0,0	1|1:1.469:0.067,0.396,0.537	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.184:0.13,0.555,0.314	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.396:0.091,0.422,0.487	1|0:1.357:0.1,0.443,0.457	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.492:0.063,0.382,0.555	1|0:1.536:0.069,0.327,0.605	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.447:0.049,0.455,0.496	1|1:1.778:0.012,0.198,0.79	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:1.319:0.121,0.439,0.44	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.413:0.078,0.431,0.491	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.826:0,0.174,0.826	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.212:0.152,0.485,0.364	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.232:0.146,0.476,0.378	0|1:1:0,1,0	1|0:1.312:0.107,0.475,0.419	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.797:0.01,0.183,0.807	0|0:0:1,0,0	1|0:1.243:0.12,0.517,0.363	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.432:0.086,0.396,0.518	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.498:0.051,0.401,0.548	0|0:0:1,0,0	1|1:1.377:0.094,0.434,0.472	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.764:0.016,0.204,0.78	0|0:0:1,0,0	1|1:1.771:0.007,0.215,0.778	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.887:0,0.113,0.887	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.885:0.003,0.11,0.887	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.899:0.002,0.097,0.901	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.964:0.002,0.033,0.966	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.643:0.027,0.304,0.67	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.402:0.098,0.401,0.501	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.432:0.076,0.416,0.508	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.63:0.032,0.306,0.662	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.14:0.194,0.472,0.334	1|1:1.579:0.033,0.355,0.612	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.704:0.013,0.269,0.717	1|1:1.545:0.065,0.324,0.611	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.349:0.104,0.442,0.453	0|0:0:1,0,0
+3	15767218	SNP-3.15765864.	C	A	.	PASS	AR2=0.982;DR2=0.986;AF=0.417	GT:DS:GP	0|0:0:1,0,0	1|1:1.764:0.011,0.214,0.775	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.872:0.005,0.119,0.876	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.869:0.004,0.124,0.872	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.956,0.044,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.721:0.014,0.25,0.736	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.876:0.134,0.856,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.968:0.001,0.031,0.968	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.778:0.013,0.197,0.791	1|1:1.68:0.013,0.294,0.693	0|0:0:1,0,0	1|1:1.742:0.017,0.224,0.759	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.8:0.009,0.181,0.81	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.792:0.012,0.184,0.804	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.477:0.032,0.458,0.509	1|1:1.787:0.011,0.191,0.798	1|1:2:0,0,1	0|0:0.011:0.989,0.011,0	1|0:1:0,1,0	0|0:0.028:0.972,0.028,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.872:0.004,0.119,0.876	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.741:0.012,0.234,0.753	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.034,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.862:0.005,0.129,0.867	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.863:0.007,0.123,0.87	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.974:0,0.026,0.974	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.88:0.006,0.108,0.886	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.855:0.006,0.134,0.86	0|0:0:1,0,0
+3	15769262	SNP-3.15767908.	C	A	.	PASS	AR2=0.996;DR2=0.998;AF=0.421	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.777:0.008,0.206,0.785	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.458:0.084,0.374,0.542	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15769501	SNP-3.15768147.	A	G	.	PASS	AR2=0.984;DR2=0.987;AF=0.498	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.672:0.027,0.274,0.699	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.827:0.006,0.162,0.832	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1.474:0.048,0.43,0.522	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.901:0.002,0.095,0.903	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	1|1:1.801:0.011,0.177,0.812	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.891:0.004,0.101,0.895	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.921:0.003,0.074,0.923	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.709:0.017,0.257,0.726	1|1:2:0,0,1	1|1:1.819:0.011,0.16,0.83	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.685:0.024,0.266,0.71	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.927:0.002,0.07,0.928	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.814:0.008,0.17,0.822	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.846:0.008,0.138,0.854	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.726:0.012,0.249,0.738	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.946:0.004,0.047,0.949	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.947:0.001,0.05,0.948	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.826:0.005,0.163,0.832	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15770793	SNP-3.15769439.	A	G	.	PASS	AR2=0.909;DR2=0.936;AF=0.416	GT:DS:GP	1|1:1.383:0.089,0.438,0.473	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.453:0.081,0.385,0.534	1|1:1.295:0.144,0.416,0.44	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.596:0.03,0.345,0.626	0|1:1:0,1,0	1|1:1.404:0.076,0.444,0.48	0|1:1.278:0.131,0.459,0.409	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.346:0.104,0.446,0.45	1|1:1.459:0.058,0.425,0.517	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.387:0.091,0.431,0.478	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1.172:0.152,0.523,0.325	0|0:0:1,0,0	0|1:1.244:0.133,0.489,0.378	0|0:0:1,0,0	1|1:1.287:0.123,0.467,0.41	1|1:2:0,0,1	0|1:1.44:0.056,0.448,0.496	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.123:0.877,0.123,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.69:0.032,0.246,0.722	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.316:0.117,0.45,0.433	1|1:1.234:0.15,0.466,0.384	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.451:0.081,0.387,0.532	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.521:0.054,0.372,0.575	0|0:0:1,0,0	1|1:1.419:0.086,0.409,0.505	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.424:0.127,0.322,0.551	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.16:0.174,0.492,0.334	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.806:0.013,0.167,0.82	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.492:0.092,0.325,0.583	1|1:1.614:0.046,0.294,0.66	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1.284:0.143,0.429,0.428	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1.011:0.254,0.482,0.265	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.236:0.097,0.57,0.333	1|1:1.644:0.031,0.294,0.675	1|1:1.497:0.058,0.387,0.555	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0
+3	15771714	SNP-3.15770360.	C	A	.	PASS	AR2=0.992;DR2=0.994;AF=0.45	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.132:0.001,0.867,0.133	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.108:0.895,0.102,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.118:0.887,0.108,0.005	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.362:0.65,0.338,0.012	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.074:0.927,0.072,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.14:0.008,0.844,0.148	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:1.983:0,0.016,0.984	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.683:0.343,0.631,0.026	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	0|0:0.306:0.7,0.294,0.006	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.097:0.905,0.093,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.032:0.968,0.031,0	0|0:0.085:0.917,0.082,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15773322	SNP-3.15771968.	C	A	.	PASS	AR2=0.986;DR2=0.988;AF=0.407	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.742:0.011,0.236,0.753	1|1:2:0,0,1	0|0:0.036:0.964,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:1.989:0,0.01,0.989	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|1:1.014:0.002,0.982,0.016	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	1|1:1.936:0,0.064,0.936	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.745:0.259,0.736,0.004	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.739:0.019,0.223,0.758	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.957:0,0.043,0.957	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.654:0.025,0.297,0.679	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.972:0,0.028,0.972	0|0:0:1,0,0	1|1:1.854:0.005,0.137,0.859	0|0:0:1,0,0	1|1:1.831:0.006,0.158,0.837	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.683:0.017,0.282,0.701	0|0:0:1,0,0	1|1:1.754:0.021,0.205,0.774	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.011:0.989,0.011,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.787:0.001,0.212,0.787	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.991:0,0.008,0.992	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.958:0,0.042,0.958	1|1:1.982:0,0.017,0.982	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.778:0.018,0.185,0.797	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.842:0.009,0.141,0.851	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.899:0.006,0.09,0.904	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.979:0,0.02,0.98	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.964:0,0.035,0.965	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.853:0.007,0.133,0.86	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15775573	SNP-3.15774219.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.282	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.858:0.002,0.138,0.86	1|0:0.966:0.045,0.943,0.012	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.833:0.004,0.158,0.837	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.909:0.003,0.085,0.912	1|1:1.654:0.029,0.288,0.683	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.801:0.01,0.179,0.811	0|0:0:1,0,0
+3	15776058	SNP-3.15774704.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.412	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.866:0.002,0.13,0.868	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.965:0.001,0.034,0.965	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15777218	SNP-3.15775864.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.43	GT:DS:GP	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.066:0.934,0.065,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.928:0.004,0.065,0.932	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.946:0.004,0.046,0.95	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.075:0.928,0.069,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15779971	SNP-3.15778617.	C	A	.	PASS	AR2=0.994;DR2=0.996;AF=0.325	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.958:0.112,0.819,0.07	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.325:0.676,0.323,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.341:0.659,0.341,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.023:0.977,0.023,0	1|1:2:0,0,1	1|1:1.956:0,0.044,0.956	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.437:0.565,0.434,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.014,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15780788	SNP-3.15779434.	C	A	.	PASS	AR2=0.993;DR2=0.994;AF=0.464	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.055:0.946,0.053,0.001	1|1:1.716:0.046,0.193,0.762	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.232:0.775,0.218,0.007	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.886:0,0.114,0.886	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.093:0.909,0.09,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.82:0,0.18,0.82	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.105:0.898,0.098,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.074:0.927,0.071,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.037:0.963,0.037,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.092:0.91,0.088,0.002	0|0:0:1,0,0	0|0:0.083:0.919,0.079,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.042:0.959,0.041,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.024:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.937,0.062,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.054:0.947,0.053,0	0|0:0:1,0,0	0|0:0.052:0.949,0.051,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15782589	SNP-3.15781235.	C	A	.	PASS	AR2=0.973;DR2=0.977;AF=0.439	GT:DS:GP	0|0:0.181:0.822,0.174,0.004	1|0:1:0,1,0	0|0:0.071:0.93,0.069,0.001	0|0:0.038:0.963,0.037,0	1|1:1.934:0.001,0.064,0.935	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.957:0,0.043,0.957	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.094:0.907,0.091,0.001	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0.079:0.922,0.077,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.074:0.927,0.071,0.001	0|0:0.164:0.842,0.152,0.006	0|0:0.193:0.817,0.173,0.01	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.099:0.903,0.095,0.002	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.943,0.056,0.001	0|0:0:1,0,0	1|1:1.291:0.136,0.438,0.427	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.255:0.755,0.234,0.011	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.865:0.004,0.126,0.869	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.362:0.055,0.529,0.417	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.97:0,0.03,0.97	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.682:0.02,0.279,0.701	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.067:0.934,0.065,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.197:0.17,0.463,0.367	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.174:0.178,0.47,0.352	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.174:0.178,0.47,0.352	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.174:0.178,0.47,0.352	0|0:0.047:0.954,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.947,0.053,0.001	0|0:0.109:0.894,0.104,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.501:0.055,0.388,0.556	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15782853	SNP-3.15781499.	C	A	.	PASS	AR2=0.988;DR2=0.99;AF=0.403	GT:DS:GP	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.864:0.005,0.126,0.869	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.056:0.944,0.055,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.959,0.041,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.959,0.04,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.403:0.057,0.484,0.459	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.575:0.024,0.376,0.6	1|1:2:0,0,1	1|1:1.593:0.012,0.383,0.605	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.97:0,0.029,0.97	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.052:0.948,0.051,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.129:0.086,0.698,0.216	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.963,0.037,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.046:0.955,0.045,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.965,0.035,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.052:0.949,0.049,0.002	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.052:0.949,0.049,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.049,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.995:0.156,0.692,0.152	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.969,0.031,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15784197	SNP-3.15782843.	C	A	.	PASS	AR2=0.992;DR2=0.994;AF=0.438	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.047:0.953,0.047,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.014:0.986,0.014,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.962,0.037,0	0|1:1:0,1,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0.019:0.982,0.018,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.767:0.014,0.206,0.781	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.864:0.004,0.128,0.868	1|1:1.937:0.001,0.062,0.938	1|0:1:0,1,0	1|1:1.749:0.011,0.23,0.759	1|1:1.656:0.035,0.274,0.691	0|1:1:0,1,0	1|1:1.867:0.001,0.13,0.868	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.967:0,0.032,0.968	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.018:0.982,0.018,0	1|1:2:0,0,1	0|0:0.071:0.93,0.07,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.039:0.962,0.038,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.976:0,0.024,0.976	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.042:0.958,0.041,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.031:0.969,0.031,0	0|0:0.043:0.957,0.043,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.946,0.053,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15792724	SNP-3.15791370.	C	A	.	PASS	AR2=0.996;DR2=0.996;AF=0.303	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.834:0.006,0.153,0.84	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.971:0,0.029,0.971	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.967:0,0.032,0.968	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.139:0.126,0.61,0.265	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.876:0.005,0.114,0.881	0|0:0:1,0,0
+3	15794165	SNP-3.15792811.	C	A	.	PASS	AR2=1;DR2=1;AF=0.45	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.011:0.989,0.011,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.03:0.97,0.029,0	1|1:2:0,0,1	0|0:0.051:0.949,0.051,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.011:0.989,0.011,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15794967	SNP-3.15793613.	C	A	.	PASS	AR2=1;DR2=1;AF=0.44	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15795700	SNP-3.15794346.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.42	GT:DS:GP	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.807:0.009,0.174,0.816	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.854:0.008,0.129,0.863	1|0:1:0,1,0	1|1:1.895:0.003,0.098,0.899	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.752:0.015,0.217,0.767	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.976:0,0.024,0.976	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.973:0,0.026,0.974	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.892:0.004,0.1,0.896	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.609:0.046,0.299,0.655	0|0:0:1,0,0
+3	15795737	SNP-3.15794383.	C	A	.	PASS	AR2=0.994;DR2=0.994;AF=0.432	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.869:0.004,0.123,0.873	0|0:0:1,0,0	1|1:1.958:0.001,0.041,0.958	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.96:0,0.039,0.961	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.961:0.001,0.038,0.962	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.948:0.001,0.051,0.948	0|0:0:1,0,0	0|0:0.03:0.97,0.03,0	1|1:1.908:0.003,0.086,0.911	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.857:0.152,0.839,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.753:0.019,0.209,0.772	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.91:0.002,0.086,0.912	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.923:0.002,0.073,0.925	1|1:1.949:0,0.05,0.949	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.945:0.001,0.054,0.946	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.952:0,0.047,0.952	1|0:1:0,1,0	0|0:0.049:0.952,0.047,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.932,0.067,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.886:0.003,0.107,0.89	0|0:0:1,0,0
+3	15795753	SNP-3.15794399.	C	A	.	PASS	AR2=0.993;DR2=0.994;AF=0.352	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.015:0.985,0.014,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.126:0.879,0.117,0.004	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0.102:0.901,0.096,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.114:0.888,0.109,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.968,0.032,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.968,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.047:0.954,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.964,0.036,0	1|1:1.564:0.012,0.413,0.575	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.938:0,0.062,0.938	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.974:0,0.025,0.975	1|1:1.965:0,0.035,0.965	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.959:0,0.04,0.959	0|0:0.023:0.977,0.023,0	1|1:2:0,0,1	0|0:0.03:0.97,0.029,0	1|1:1.983:0,0.017,0.983	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.982:0,0.017,0.982	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.113:0.891,0.105,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.96,0.039,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.922:0.002,0.073,0.925	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15796375	SNP-3.15795021.	C	A	.	PASS	AR2=0.984;DR2=0.987;AF=0.292	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.021:0.238,0.504,0.258	0|0:0:1,0,0	0|1:1.291:0.072,0.564,0.363	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.316:0.684,0.316,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.126:0.146,0.581,0.272	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.59:0.489,0.431,0.08	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.886:0.307,0.5,0.193	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.582:0.418,0.581,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15802277	SNP-3.15800923.	C	A	.	PASS	AR2=0.989;DR2=0.99;AF=0.44	GT:DS:GP	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.108:0.895,0.102,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.133:0.872,0.123,0.005	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.921:0.007,0.065,0.928	1|1:1.937:0.002,0.059,0.939	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.819:0.007,0.168,0.825	1|1:2:0,0,1	1|1:1.891:0.004,0.101,0.895	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.136:0.869,0.126,0.005	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.136:0.868,0.127,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.748:0.037,0.177,0.785	1|1:2:0,0,1	1|1:1.919:0.003,0.074,0.922	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.975,0.025,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.772:0.013,0.202,0.785	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.959:0.001,0.04,0.96	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.922:0.001,0.075,0.924	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.15:0.856,0.138,0.006	0|0:0.11:0.893,0.104,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.865:0.006,0.124,0.87	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.102:0.9,0.097,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.036:0.964,0.035,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.107:0.896,0.101,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.031:0.969,0.031,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.112:0.891,0.105,0.004	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0
+3	15803454	SNP-3.15802100.	C	A	.	PASS	AR2=0.989;DR2=0.992;AF=0.472	GT:DS:GP	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.072:0.929,0.069,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.109:0.893,0.105,0.002	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.11:0.893,0.104,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.833:0.201,0.766,0.034	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.925,0.073,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.047:0,0.953,0.047	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.14:0.868,0.125,0.007	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.127:0,0.872,0.127	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.164:0.843,0.149,0.007	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.703:0.467,0.363,0.17	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.942,0.055,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.103:0.899,0.099,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.049:0.952,0.047,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.127:0.875,0.122,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.052:0.951,0.046,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15803470	SNP-3.15802116.	C	A	.	PASS	AR2=0.937;DR2=0.952;AF=0.412	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.119:0.884,0.114,0.003	1|1:2:0,0,1	1|1:1.692:0.022,0.263,0.714	0|0:0:1,0,0	1|1:1.45:0.066,0.417,0.516	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.197:0.808,0.188,0.004	0|0:0.078:0.922,0.077,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.219:0.791,0.199,0.01	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.317:0.015,0.654,0.331	0|0:0:1,0,0	0|0:0.458:0.604,0.334,0.062	0|0:0:1,0,0	0|0:0.424:0.609,0.357,0.034	0|0:0:1,0,0	0|0:0.539:0.529,0.403,0.068	0|0:0.321:0.704,0.271,0.025	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.161:0.844,0.151,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.11:0.891,0.107,0.002	0|0:0:1,0,0	0|0:0.207:0.799,0.195,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.359:0.647,0.347,0.006	0|0:0.493:0.556,0.395,0.049	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.119:0.882,0.116,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.95,0.05,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.879:0.004,0.114,0.882	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.956:0.278,0.488,0.234	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.65:0.022,0.307,0.671	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.971:0.001,0.028,0.971	0|0:0.173:0.837,0.153,0.01	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.791:0.009,0.191,0.8	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.959:0.002,0.037,0.961	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.896:0.007,0.09,0.903	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.445:0.56,0.434,0.005	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.359:0.664,0.313,0.023	0|1:0.951:0.292,0.465,0.243	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.543:0.057,0.344,0.599	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.145:0.863,0.129,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.254:0.758,0.231,0.011	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.344:0.69,0.276,0.034	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.298:0.72,0.262,0.018	0|0:0.461:0.543,0.454,0.003	0|0:0.061:0.941,0.056,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.397:0.632,0.339,0.029	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.786:0.265,0.683,0.051	0|0:0:1,0,0	1|1:1.573:0.007,0.414,0.579	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.414:0.628,0.33,0.042	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.688:0.412,0.488,0.1	0|0:0.102:0.9,0.098,0.002	0|0:0:1,0,0	0|1:0.859:0.32,0.502,0.178	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.969:0,0.03,0.969	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.221:0.787,0.205,0.008	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.1:0.903,0.094,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.182:0.828,0.161,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.937:0.292,0.478,0.229	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.869:0.013,0.104,0.883	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15804561	SNP-3.15803207.	C	A	.	PASS	AR2=1;DR2=1;AF=0.436	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.931:0.001,0.068,0.932	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15804879	SNP-3.15803525.	C	A	.	PASS	AR2=1;DR2=1;AF=0.457	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.017:0.983,0.017,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15808214	SNP-3.15806860.	C	A	.	PASS	AR2=1;DR2=1;AF=0.438	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15808331	SNP-3.15806977.	C	A	.	PASS	AR2=0.971;DR2=0.976;AF=0.355	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.921:0.314,0.451,0.235	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.947,0.052,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.147:0.868,0.116,0.015	1|0:0.711:0.358,0.574,0.069	0|0:0.302:0.699,0.3,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.015:0.044,0.897,0.059	1|0:0.684:0.438,0.44,0.122	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.016:0.984,0.016,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.92:0.001,0.077,0.922	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.933:0.002,0.062,0.935	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.25:0.751,0.247,0.002	1|0:1.361:0.025,0.588,0.386	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.051:0.259,0.431,0.31	0|0:0:1,0,0	1|1:1.807:0.004,0.185,0.811	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.864:0.006,0.125,0.87	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.907:0.105,0.883,0.012	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.807:0.008,0.178,0.814	0|0:0.02:0.98,0.02,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.929,0.07,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.94:0.002,0.056,0.942	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.828:0.342,0.489,0.169	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.505:0.496,0.504,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0.023:0.977,0.023,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.946:0.002,0.05,0.948	0|0:0.39:0.671,0.268,0.061	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.923:0.003,0.072,0.926	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.948,0.052,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.816:0.033,0.118,0.849	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15808814	SNP-3.15807460.	C	A	.	PASS	AR2=0.997;DR2=0.997;AF=0.422	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.027:0.202,0.568,0.23	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.955:0.001,0.044,0.955	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.914:0.088,0.91,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.934:0.002,0.062,0.936	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15809084	SNP-3.15807730.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.438	GT:DS:GP	0|0:0.008:0.992,0.007,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.022:0.978,0.022,0	1|1:2:0,0,1	1|1:1.959:0,0.041,0.959	0|1:1:0,1,0	1|1:1.977:0,0.023,0.977	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0.001,0.027,0.973	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.981:0,0.019,0.981	1|1:1.972:0.001,0.027,0.973	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.005:0,0.995,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.984:0,0.016,0.984	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15809261	SNP-3.15807907.	C	A	.	PASS	AR2=0.947;DR2=0.958;AF=0.422	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.586:0.043,0.328,0.629	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.663:0.029,0.278,0.693	1|1:1.796:0.019,0.167,0.814	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.606:0.034,0.327,0.639	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.232:0.782,0.205,0.013	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.746:0.018,0.218,0.764	1|1:2:0,0,1	1|1:1.711:0.021,0.247,0.732	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.754:0.015,0.216,0.769	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.543:0.051,0.356,0.593	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.227:0.785,0.202,0.013	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.244:0.769,0.217,0.014	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.183:0.825,0.166,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.625:0.039,0.298,0.664	1|1:2:0,0,1	0|1:1.027:0.265,0.442,0.293	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.921:0.001,0.076,0.923	0|0:0:1,0,0	1|0:1.336:0.094,0.476,0.43	0|0:0:1,0,0	0|1:1.124:0.21,0.456,0.334	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.565:0.044,0.348,0.608	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.632:0.031,0.307,0.662	1|1:1.707:0.019,0.255,0.726	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.037:0.963,0.036,0.001	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.088:0.914,0.084,0.002	1|0:1:0,1,0	1|1:1.548:0.055,0.342,0.603	1|1:2:0,0,1	1|1:1.832:0.007,0.153,0.84	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.075:0.926,0.073,0.001	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.738:0.017,0.227,0.756	0|0:0.235:0.779,0.208,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.739:0.018,0.226,0.756	0|0:0.17:0.838,0.155,0.007	0|0:0:1,0,0	0|0:0.217:0.795,0.194,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.572:0.046,0.336,0.618	0|0:0.286:0.734,0.246,0.02	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.832:0.007,0.153,0.839	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.738:0.017,0.227,0.756	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.738:0.017,0.227,0.756	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	1|1:1.912:0.002,0.085,0.914	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.69:0.025,0.261,0.714	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15809606	SNP-3.15808252.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.443	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.985:0,0.015,0.985	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.093:0.92,0.068,0.013	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.966:0.001,0.033,0.966	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.497:0.565,0.373,0.062	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.93:0.001,0.069,0.93	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15809832	SNP-3.15808478.	C	A	.	PASS	AR2=0.964;DR2=0.971;AF=0.362	GT:DS:GP	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.709:0.022,0.246,0.731	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.936:0.245,0.573,0.182	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.773:0.014,0.198,0.787	1|0:1.38:0.099,0.421,0.479	0|1:1.156:0.178,0.487,0.334	0|1:1.086:0.211,0.493,0.297	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.733:0.017,0.233,0.75	0|0:0.078:0.922,0.078,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1.14:0.207,0.447,0.346	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.769:0.007,0.217,0.776	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.183:0.827,0.162,0.011	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.76:0.017,0.207,0.777	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.804:0.333,0.529,0.137	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.448:0.078,0.396,0.526	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.324:0.111,0.454,0.435	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.832:0.006,0.156,0.838	0|0:0:1,0,0	1|1:1.694:0.031,0.244,0.725	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.817:0.011,0.16,0.828	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.504:0.048,0.4,0.552	0|0:0:1,0,0
+3	15810017	SNP-3.15808663.	C	A	.	PASS	AR2=1;DR2=1;AF=0.438	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15812305	SNP-3.15810951.	C	A	.	PASS	AR2=0.997;DR2=0.998;AF=0.449	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.027:0.973,0.027,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.983,0.017,0	1|1:2:0,0,1	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0.05:0.95,0.049,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.156:0.852,0.139,0.008	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.026:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.222:0.796,0.186,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15813860	SNP-3.15812506.	C	A	.	PASS	AR2=1;DR2=1;AF=0.457	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15814019	SNP-3.15812665.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.448	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.071:0.932,0.065,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.041:0.959,0.041,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.28:0.755,0.209,0.036	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.021:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15814535	SNP-3.15813181.	A	G	.	PASS	AR2=0.979;DR2=0.984;AF=0.508	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.025,0	0|0:0:1,0,0	0|1:1.537:0.026,0.41,0.563	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.026:0.975,0.025,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1.638:0.024,0.315,0.661	1|1:1.915:0.002,0.081,0.917	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.77:0.01,0.209,0.78	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.94:0.002,0.057,0.941	1|1:1.927:0.002,0.07,0.929	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.939:0.001,0.06,0.94	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.85:0.003,0.144,0.853	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.789:0.012,0.187,0.801	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.464:0.087,0.362,0.551	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.793:0.01,0.187,0.803	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.818:0.022,0.139,0.839	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.907:0.002,0.09,0.908	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.024,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.645:0.036,0.284,0.681	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.92:0.001,0.078,0.921	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.976:0,0.023,0.977	1|1:2:0,0,1	1|1:1.818:0.007,0.168,0.825	1|1:1.849:0.003,0.146,0.851	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.947:0.001,0.051,0.948	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.968:0.001,0.03,0.969	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0,0.031,0.969	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.828:0.009,0.154,0.837	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.883:0.003,0.112,0.885	1|1:1.744:0.032,0.192,0.776	0|0:0:1,0,0	1|1:2:0,0,1
+3	15814961	SNP-3.15813607.	C	A	.	PASS	AR2=1;DR2=1;AF=0.34	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.989:0,0.011,0.989	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15815100	SNP-3.15813746.	C	A	.	PASS	AR2=0.992;DR2=0.994;AF=0.421	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.606:0.394,0.606,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.551:0.079,0.292,0.63	1|1:1.748:0.003,0.246,0.751	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1.285:0.134,0.447,0.419	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	15815426	SNP-3.15814072.	C	A	.	PASS	AR2=0.965;DR2=0.971;AF=0.379	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.816:0.008,0.167,0.824	1|1:1.739:0.016,0.23,0.754	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.814:0.009,0.167,0.823	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.81:0.01,0.171,0.82	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.81:0.01,0.171,0.82	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.81:0.01,0.17,0.82	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.764:0.012,0.211,0.776	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.843:0.002,0.154,0.844	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.773:0.016,0.195,0.789	1|1:1.622:0.034,0.31,0.656	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.944:0.121,0.813,0.066	1|1:1.528:0.038,0.396,0.566	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.773:0.014,0.199,0.787	1|1:1.816:0.007,0.171,0.823	1|1:2:0,0,1	1|1:1.818:0.009,0.165,0.826	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.807:0.009,0.175,0.816	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.645:0.037,0.281,0.682	1|1:2:0,0,1	1|1:1.821:0.01,0.158,0.832	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.81:0.01,0.17,0.82	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.809:0.01,0.172,0.819	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.81:0.01,0.17,0.82	1|1:2:0,0,1	1|1:1.692:0.021,0.265,0.713	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.781:0.01,0.2,0.79	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	1|1:1.723:0.024,0.229,0.747	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.776:0.013,0.198,0.789	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.872:0.004,0.12,0.876	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.809:0.01,0.171,0.819	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.966:0,0.034,0.966	1|0:1:0,1,0	1|1:1.77:0.014,0.201,0.784	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.788:0.012,0.188,0.8	1|1:1.991:0,0.008,0.992	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.904:0.003,0.091,0.907	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.172:0.057,0.714,0.229	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.396:0.049,0.506,0.445	0|0:0:1,0,0
+3	15816152	SNP-3.15814798.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.432	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	1|1:1.931:0,0.069,0.931	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.152:0.849,0.15,0.001	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15819390	SNP-3.15818036.	C	A	.	PASS	AR2=0.993;DR2=0.996;AF=0.344	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.959:0,0.04,0.96	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.137:0.263,0.337,0.4	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.926:0,0.073,0.927	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.948:0.001,0.049,0.95	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.008:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15820972	SNP-3.15819618.	C	A	.	PASS	AR2=0.954;DR2=0.963;AF=0.325	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.022:0.978,0.021,0	1|1:1.458:0.096,0.35,0.554	1|1:2:0,0,1	1|1:1.685:0.019,0.277,0.704	0|0:0.059:0.942,0.058,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.931,0.069,0	1|1:1.84:0.007,0.146,0.847	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.741:0.019,0.222,0.76	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.644:0.025,0.305,0.67	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.741:0.013,0.233,0.754	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.981:0,0.018,0.982	1|1:1.777:0.007,0.209,0.784	1|1:1.99:0,0.01,0.99	1|1:1.562:0.041,0.356,0.603	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.99:0,0.009,0.991	1|1:2:0,0,1	1|0:1.192:0.084,0.641,0.275	1|1:1.564:0.034,0.368,0.598	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.609:0.03,0.332,0.639	1|1:1.547:0.035,0.383,0.582	1|1:1.927:0,0.073,0.927	1|1:1.989:0,0.011,0.989	1|1:1.987:0,0.013,0.987	1|1:1.987:0,0.013,0.987	1|1:1.973:0,0.027,0.973	1|1:2:0,0,1	1|1:1.775:0.014,0.198,0.788	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.983:0,0.017,0.983	0|0:0:1,0,0	1|1:1.698:0.003,0.296,0.701	1|0:0.974:0.263,0.5,0.237	1|1:1.867:0.003,0.128,0.869	0|0:0:1,0,0	1|1:1.856:0.003,0.137,0.86	0|0:0:1,0,0	1|1:1.807:0.013,0.167,0.82	0|0:0:1,0,0	1|1:1.866:0.005,0.123,0.871	1|1:1.802:0.004,0.19,0.806	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.882:0.002,0.113,0.885	1|1:1.81:0.011,0.169,0.821	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.977:0,0.023,0.977	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.538:0.052,0.358,0.59	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.101:0.9,0.099,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.846:0.008,0.138,0.854	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.868:0.003,0.126,0.871	0|0:0:1,0,0	1|1:1.707:0.027,0.238,0.735	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.085:0.917,0.082,0.002	1|1:1.824:0.011,0.154,0.835	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.799:0.007,0.186,0.807	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.776:0.014,0.196,0.79	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.889:0.002,0.108,0.89	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.857:0,0.143,0.857	0|1:1.299:0.145,0.41,0.445	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15824185	SNP-3.15822831.	C	A	.	PASS	AR2=0.997;DR2=0.998;AF=0.436	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.984:0,0.016,0.984	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.063:0,0.937,0.063	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.352:0,0.648,0.352	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.607:0.002,0.39,0.609	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.974:0.001,0.025,0.974	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15824804	SNP-3.15823450.	C	A	.	PASS	AR2=0.988;DR2=0.99;AF=0.472	GT:DS:GP	0|0:0.13:0.874,0.122,0.004	1|1:1.972:0,0.027,0.973	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.327:0.707,0.26,0.034	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.131:0.871,0.127,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.111:0.893,0.103,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.16:0.846,0.149,0.006	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.173:0.837,0.154,0.01	0|0:0:1,0,0	0|0:0.204:0.8,0.197,0.003	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.027,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0.267:0.748,0.236,0.016	0|0:0:1,0,0	0|0:0.153:0.854,0.14,0.007	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.954:0,0.045,0.954	1|1:1.985:0,0.015,0.985	0|0:0.167:0.838,0.156,0.005	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.404:0.639,0.318,0.043	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.936,0.063,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.092:0.91,0.088,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.075:0.926,0.073,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15826299	SNP-3.15824945.	C	A	.	PASS	AR2=0.99;DR2=0.991;AF=0.38	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.129:0.879,0.113,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.974:0.001,0.024,0.975	0|0:0:1,0,0	1|0:0.441:0.584,0.391,0.025	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.838:0.341,0.481,0.178	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:0.833:0.343,0.481,0.176	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|1:1:0,1,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.002,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.89:0.314,0.482,0.204	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15826347	SNP-3.15824993.	C	A	.	PASS	AR2=0.989;DR2=0.992;AF=0.391	GT:DS:GP	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.915:0.005,0.075,0.92	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.537:0.051,0.361,0.588	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.628:0.034,0.304,0.662	1|1:1.665:0.028,0.279,0.693	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1.761:0.011,0.217,0.772	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.774:0.02,0.185,0.795	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.795:0.01,0.184,0.805	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.739:0.023,0.216,0.762	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	15830365	SNP-3.15829011.	C	A	.	PASS	AR2=1;DR2=1;AF=0.447	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.911:0.002,0.085,0.913	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15833405	SNP-3.15832051.	C	A	.	PASS	AR2=0.965;DR2=0.973;AF=0.343	GT:DS:GP	0|0:0.036:0.964,0.035,0	0|1:1:0,1,0	0|0:0.074:0.928,0.071,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.169:0.161,0.509,0.33	0|0:0:1,0,0	0|1:1.312:0.111,0.467,0.423	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.241:0.159,0.441,0.4	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.061:0.94,0.059,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.063:0.938,0.061,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.077:0.925,0.074,0.002	0|0:0:1,0,0	1|0:0.97:0.236,0.557,0.207	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.475:0.539,0.447,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.952:0.241,0.565,0.193	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.116:0.284,0.316,0.4	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.376:0.636,0.352,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.076:0.925,0.075,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.136:0.869,0.125,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.955,0.044,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.776:0.383,0.458,0.159	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.089:0.913,0.085,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.074:0.927,0.073,0	0|0:0:1,0,0	0|0:0.341:0.67,0.319,0.011	0|0:0.077:0.925,0.073,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.227:0.122,0.529,0.349	1|1:1.581:0.105,0.208,0.687	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.042:0.959,0.04,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.952,0.048,0.001	0|0:0.049:0.952,0.047,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15833795	SNP-3.15832441.	C	A	.	PASS	AR2=0.969;DR2=0.98;AF=0.424	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.647:0.044,0.264,0.691	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.504:0.059,0.379,0.562	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.49:0.067,0.377,0.556	1|1:1.459:0.071,0.399,0.53	1|1:1.504:0.059,0.379,0.562	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.486:0.067,0.379,0.554	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.584:0.424,0.568,0.008	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.958:0,0.042,0.958	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.484:0.065,0.386,0.549	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.569:0.051,0.33,0.62	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.684:0.034,0.249,0.717	1|1:2:0,0,1	1|1:1.504:0.059,0.379,0.562	1|1:1.7:0.031,0.237,0.731	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.534:0.059,0.349,0.593	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15835616	SNP-3.15834262.	C	A	.	PASS	AR2=0.987;DR2=0.99;AF=0.325	GT:DS:GP	0|0:0.062:0.938,0.061,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.794:0.015,0.177,0.808	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.051,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.043:0.958,0.042,0.001	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.069:0.933,0.066,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.943,0.056,0.001	1|1:2:0,0,1	0|0:0.557:0.46,0.522,0.017	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.049:0.952,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.617:0.048,0.288,0.664	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.812:0.008,0.172,0.82	0|0:0.24:0.792,0.176,0.032	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.763:0.009,0.219,0.772	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.024:0.976,0.024,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.757:0.027,0.19,0.784	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15836215	SNP-3.15834861.	A	G	.	PASS	AR2=0.948;DR2=0.958;AF=0.457	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.121:0.884,0.111,0.005	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.333:0.69,0.286,0.023	1|1:1.78:0.012,0.197,0.792	1|1:1.824:0.008,0.159,0.832	1|1:1.84:0.007,0.147,0.846	1|1:2:0,0,1	1|1:1.829:0.007,0.157,0.836	1|1:2:0,0,1	1|1:1.727:0.017,0.239,0.744	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.81:0.008,0.174,0.818	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.48:0.043,0.434,0.523	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.786:0.01,0.195,0.795	1|1:2:0,0,1	1|1:1.762:0.013,0.211,0.776	1|1:2:0,0,1	1|1:1.808:0.009,0.173,0.817	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0.114:0.889,0.107,0.004	0|0:0:1,0,0	1|1:1.765:0.013,0.21,0.778	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.248:0.769,0.213,0.017	1|1:1.734:0.018,0.23,0.752	1|0:0.545:0.489,0.477,0.034	0|0:0.031:0.969,0.03,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.243:0.106,0.546,0.349	1|1:1.864:0.005,0.126,0.869	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.296:0.711,0.282,0.007	0|0:0:1,0,0	1|1:1.738:0.016,0.23,0.754	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.638:0.031,0.3,0.669	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.212:0.812,0.164,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.158:0.848,0.146,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.119:0.177,0.526,0.297	0|0:0.103:0.897,0.103,0	0|0:0:1,0,0	0|0:0.101:0.906,0.087,0.007	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.833:0.008,0.151,0.841	0|0:0:1,0,0	1|1:1.833:0.008,0.152,0.841	0|0:0.256:0.79,0.165,0.046	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.8:0.009,0.183,0.809	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.71:0.019,0.251,0.73	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.304:0.727,0.242,0.031	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.099:0.907,0.087,0.006	0|0:0.094:0.909,0.088,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.755:0.013,0.219,0.768	1|1:1.76:0.013,0.214,0.773	1|1:1.753:0.015,0.217,0.768	1|1:2:0,0,1	0|0:0.091:0.911,0.087,0.002	1|1:1.725:0.017,0.24,0.742	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.822:0.008,0.162,0.83	1|1:2:0,0,1	1|1:1.746:0.016,0.221,0.763	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.495:0.046,0.414,0.54	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.84:0.009,0.142,0.849	0|0:0:1,0,0	1|1:1.838:0.008,0.147,0.845	1|1:2:0,0,1	1|1:1.669:0.019,0.292,0.688	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.739:0.409,0.444,0.148	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.776:0.007,0.21,0.783
+3	15836610	SNP-3.15835256.	C	A	.	PASS	AR2=0.992;DR2=0.994;AF=0.353	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.021:0.979,0.02,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.051:0.949,0.05,0	0|0:0:1,0,0	0|0:0.078:0.922,0.077,0.001	0|0:0.045:0.956,0.044,0	1|0:1:0,1,0	0|0:0.057:0.944,0.055,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.125:0.879,0.116,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.951,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.959,0.04,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.257:0.751,0.242,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.036:0,0.963,0.036	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.011:0.989,0.011,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.086:0.916,0.081,0.002	0|0:0.046:0.954,0.045,0	0|0:0:1,0,0	0|0:0.035:0.966,0.034,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.938,0.061,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.045:0.956,0.044,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.529:0.505,0.461,0.034	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.959,0.041,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15839721	SNP-3.15838367.	C	A	.	PASS	AR2=0.895;DR2=0.916;AF=0.283	GT:DS:GP	0|0:0:1,0,0	0|1:1.051:0.184,0.582,0.234	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.679:0.423,0.475,0.102	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.632:0.478,0.412,0.11	0|1:1.267:0.144,0.445,0.411	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.016:0.197,0.589,0.214	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.717:0.415,0.452,0.132	1|0:1.001:0.252,0.495,0.253	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.917:0.287,0.509,0.204	0|1:0.967:0.267,0.499,0.234	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.961:0.268,0.503,0.229	0|0:0:1,0,0	0|1:0.96:0.271,0.498,0.231	0|1:1.001:0.252,0.495,0.253	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.101:0.198,0.504,0.298	1|1:1.777:0,0.222,0.778	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.797:0.361,0.48,0.158	1|1:2:0,0,1	0|1:1.277:0.125,0.472,0.403	0|0:0.178:0.841,0.14,0.019	1|1:1.692:0.004,0.301,0.696	1|1:1.948:0,0.052,0.948	1|1:1.931:0,0.069,0.931	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.26:0.768,0.204,0.028	0|0:0.634:0.478,0.41,0.112	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.541:0.04,0.379,0.581	0|0:0:1,0,0	1|1:1.597:0.034,0.335,0.631	1|0:0.931:0.286,0.497,0.217	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.089:0.122,0.667,0.211	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.66:0.042,0.257,0.701	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:0.969:0.265,0.501,0.234	0|0:0:1,0,0	0|0:0.969:0.265,0.501,0.234	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.713:0.019,0.249,0.732	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.115:0.262,0.361,0.377	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.351:0.088,0.472,0.439	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.574:0.504,0.418,0.078	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.93:0.287,0.496,0.217	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.934:0.002,0.061,0.936	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.667:0.471,0.392,0.137	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.862:0.332,0.474,0.194	0|1:0.954:0.272,0.502,0.226	1|1:1.366:0.132,0.369,0.498	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.786:0.384,0.446,0.17	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.96:0,0.039,0.96	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.912:0,0.088,0.912	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.912:0,0.087,0.912	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15841147	SNP-3.15839793.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.465	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.017:0.984,0.016,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.935,0.064,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.015:0.985,0.015,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15842052	SNP-3.15840698.	C	A	.	PASS	AR2=0.994;DR2=0.994;AF=0.479	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.08:0.922,0.077,0.001	0|0:0.056:0.945,0.055,0.001	1|1:1.979:0,0.021,0.979	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.971:0,0.028,0.972	0|0:0:1,0,0	0|0:0.068:0.934,0.064,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.963,0.037,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.072:0.929,0.07,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.075:0.927,0.072,0.002	1|1:2:0,0,1	1|0:1.036:0,0.964,0.036	0|0:0:1,0,0	0|0:0.047:0.954,0.046,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.184:0.825,0.165,0.009	0|0:0.071:0.93,0.068,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.937,0.062,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.033:0.968,0.032,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.085:0.918,0.08,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.103:0.9,0.097,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.975:0,0.024,0.976	1|1:1.969:0,0.031,0.969	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.089:0.913,0.085,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.931,0.068,0.001	0|0:0.188:0.819,0.175,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.969:0,0.031,0.969	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.969:0,0.031,0.969	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0
+3	15842242	SNP-3.15840888.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.323	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.002:0,0.998,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.009:0,0.991,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.094:0,0.906,0.094	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.019:0.981,0.018,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15847180	SNP-3.15845826.	C	A	.	PASS	AR2=0.993;DR2=0.994;AF=0.466	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.974:0,0.026,0.974	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.956:0.001,0.043,0.956	1|1:1.942:0.001,0.057,0.942	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.956:0.001,0.043,0.956	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.956:0.001,0.043,0.956	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.114:0.887,0.112,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.999:0.014,0.974,0.013	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.806:0.002,0.189,0.808	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.019,0.981	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.976:0,0.024,0.976	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0,0.021,0.978	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.642:0.004,0.35,0.646	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.956:0.001,0.043,0.957	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.018:0.982,0.018,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.929:0.001,0.069,0.93	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.935:0,0.064,0.936	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.283:0.718,0.281,0.001	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.983:0,0.017,0.983	1|1:1.956:0.001,0.043,0.956	0|0:0.001:0.999,0.001,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.927:0.002,0.07,0.929	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.965:0,0.035,0.965	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.956:0.001,0.043,0.956	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0.034:0.967,0.033,0.001	1|1:2:0,0,1	0|0:0:1,0,0
+3	15847403	SNP-3.15846049.	C	A	.	PASS	AR2=0.998;DR2=0.999;AF=0.315	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.018:0.982,0.017,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.639:0.003,0.354,0.642	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0.011,0.978,0.011	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.035:0.965,0.035,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15847427	SNP-3.15846073.	C	A	.	PASS	AR2=0.996;DR2=0.996;AF=0.298	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.814:0.009,0.168,0.823	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.915:0.087,0.912,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.853:0.006,0.135,0.859	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.849:0.006,0.139,0.855	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.924:0.001,0.074,0.925	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.872:0.004,0.12,0.876	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.975:0,0.025,0.975	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	15847481	SNP-3.15846127.	C	A	.	PASS	AR2=1;DR2=1;AF=0.313	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.032:0.968,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.97,0.029,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.987:0.017,0.979,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15848368	SNP-3.15847014.	C	A	.	PASS	AR2=0.99;DR2=0.992;AF=0.316	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.757:0.014,0.215,0.771	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.1:0.902,0.097,0.002	0|0:0.253:0.751,0.245,0.004	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.169:0.832,0.166,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.958:0.136,0.771,0.094	0|0:0.091:0.911,0.088,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.742:0.016,0.226,0.758	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.073:0.928,0.071,0.001	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.117:0.886,0.112,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.106:0.896,0.101,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.146:0.857,0.14,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15848764	SNP-3.15847410.	A	G	.	PASS	AR2=0.983;DR2=0.988;AF=0.497	GT:DS:GP	1|1:1.661:0.018,0.303,0.679	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.46:0.024,0.492,0.484	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.925:0.075,0.925,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.853:0.004,0.138,0.857	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.933:0.067,0.933,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.909:0.002,0.088,0.91	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.595:0.026,0.353,0.621	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.877:0.004,0.115,0.881	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.812:0.008,0.173,0.82	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.817:0.007,0.17,0.824	1|1:2:0,0,1	0|1:1.467:0.061,0.411,0.528	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.897:0.003,0.098,0.9	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.903:0.004,0.089,0.907	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.607:0.041,0.312,0.647	1|1:1.677:0.019,0.286,0.696	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15848878	SNP-3.15847524.	C	A	.	PASS	AR2=1;DR2=1;AF=0.319	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.98:0.02,0.98,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15853768	SNP-3.15852414.	A	G	.	PASS	AR2=0.955;DR2=0.965;AF=0.434	GT:DS:GP	0|1:1.514:0.035,0.415,0.549	0|0:0:1,0,0	1|1:1.757:0.016,0.211,0.773	1|1:1.883:0.004,0.109,0.887	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.903:0.003,0.091,0.906	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.676:0.037,0.251,0.712	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1.041:0.226,0.507,0.267	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1.064:0.188,0.561,0.252	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.613:0.029,0.329,0.642	1|1:2:0,0,1	1|1:1.367:0.094,0.444,0.462	1|1:2:0,0,1	1|1:1.624:0.02,0.336,0.644	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.886:0.003,0.108,0.889	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.594:0.406,0.594,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.012:0.232,0.525,0.243	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.88:0.004,0.113,0.884	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1.331:0.068,0.532,0.4	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.201:0.131,0.538,0.332	1|1:1.613:0.023,0.34,0.636	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.969:0.244,0.544,0.213	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.368:0.051,0.531,0.418	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.612:0.024,0.341,0.636	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.668:0.019,0.293,0.687	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.863:0.004,0.13,0.866	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.81:0.01,0.17,0.82	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.889:0.003,0.105,0.892	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.886:0.004,0.107,0.889	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.959:0.001,0.039,0.96	1|1:1.66:0.021,0.297,0.682	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.388:0.107,0.399,0.495	0|0:0:1,0,0	0|1:1:0,1,0
+3	15857444	SNP-3.15856090.	C	A	.	PASS	AR2=0.969;DR2=0.975;AF=0.261	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.746:0.013,0.228,0.759	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:0.972:0.092,0.845,0.063	1|1:1.654:0.028,0.289,0.683	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.771:0.006,0.217,0.777	1|1:1.558:0.044,0.355,0.602	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.859:0.004,0.133,0.863	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.537:0.016,0.431,0.553	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.912:0.246,0.595,0.158	1|1:1.185:0.176,0.463,0.361	1|1:1.635:0.008,0.35,0.643	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.985:0.039,0.937,0.024	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.593:0.024,0.36,0.617	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.92:0.001,0.077,0.921	0|0:0.031:0.969,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.796:0.01,0.185,0.805	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.907:0.003,0.086,0.91	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.836:0.008,0.147,0.845	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.741:0.019,0.221,0.76	1|1:1.704:0.017,0.261,0.722	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15860365	SNP-3.15859011.	C	A	.	PASS	AR2=0.967;DR2=0.968;AF=0.391	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.961:0,0.039,0.961	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1.033:0.234,0.499,0.267	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.033:0.234,0.499,0.267	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1.033:0.234,0.499,0.267	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.999:0.003,0.996,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.99:0.014,0.982,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.951:0.001,0.048,0.952	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:1.976:0,0.024,0.976	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.988:0.012,0.988,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.033:0.234,0.499,0.267	1|1:2:0,0,1	0|1:1.033:0.234,0.499,0.267	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.033:0.234,0.499,0.267	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1.123:0.193,0.49,0.317	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.656:0.004,0.337,0.66	1|1:2:0,0,1	1|0:1.033:0.234,0.499,0.267	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.983:0,0.017,0.983	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:1.033:0.234,0.499,0.267	1|0:1:0,1,0	0|1:1.033:0.234,0.499,0.267	1|0:1.033:0.234,0.499,0.267	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1.033:0.234,0.499,0.267	0|0:0:1,0,0	0|1:1.033:0.234,0.499,0.267	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15860636	SNP-3.15859282.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.342	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.022:0.978,0.022,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.065:0.936,0.063,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.121:0.883,0.113,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.121:0.883,0.113,0.004	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.017:0,0.983,0.017	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.012:0.988,0.012,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.121:0.883,0.113,0.004	0|0:0.083:0.918,0.081,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.017:0.983,0.017,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.124:0.88,0.116,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15862776	SNP-3.15861422.	A	G	.	PASS	AR2=0.996;DR2=0.997;AF=0.516	GT:DS:GP	1|1:1.821:0.002,0.175,0.823	0|0:0:1,0,0	1|1:1.934:0.001,0.064,0.935	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.021:0.025,0.928,0.047	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.964:0,0.036,0.964	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.954:0.001,0.045,0.955	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.946:0.001,0.052,0.947	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.804:0.006,0.185,0.81	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.923:0.001,0.074,0.924	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.928:0.001,0.069,0.929	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.966:0.034,0.966,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.951:0.001,0.048,0.952	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15865627	SNP-3.15864273.	C	A	.	PASS	AR2=0.997;DR2=0.997;AF=0.45	GT:DS:GP	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|0:1:0,1,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:1.89:0.003,0.104,0.893	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.89:0.003,0.104,0.893	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.89:0.003,0.104,0.893	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.89:0.003,0.104,0.893	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.753:0.011,0.225,0.764	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15865779	SNP-3.15864425.	C	A	.	PASS	AR2=1;DR2=1;AF=0.459	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15867554	SNP-3.15866200.	C	A	.	PASS	AR2=0.979;DR2=0.982;AF=0.378	GT:DS:GP	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.134:0.871,0.125,0.005	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.067:0.934,0.065,0.001	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.198:0.812,0.178,0.01	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.335:0.681,0.302,0.016	0|0:0.198:0.812,0.178,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.198:0.812,0.178,0.01	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0.164:0.845,0.146,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0.294:0.726,0.255,0.019	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0.197:0.808,0.187,0.005	1|0:1:0,1,0	0|0:0.266:0.747,0.24,0.013	1|1:2:0,0,1	1|0:1.093:0.003,0.901,0.096	0|0:0:1,0,0	0|0:0.079:0.922,0.076,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.238:0.776,0.211,0.014	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.298:0.731,0.24,0.029	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.109:0.893,0.105,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.222:0.789,0.201,0.01	0|0:0:1,0,0	0|0:0.07:0.932,0.067,0.001	0|0:0.03:0.97,0.029,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.084:0.918,0.081,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.044:0.956,0.043,0.001	0|0:0.056:0.944,0.055,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.149:0.855,0.141,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.946,0.054,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.045:0.956,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.178:0.828,0.166,0.006	0|0:0.328:0.699,0.273,0.028	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15869927	SNP-3.15868573.	C	A	.	PASS	AR2=0.995;DR2=0.997;AF=0.305	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.664:0.001,0.333,0.666	1|1:1.67:0.001,0.328,0.671	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.665:0,0.334,0.665	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0
+3	15869964	SNP-3.15868610.	C	A	.	PASS	AR2=0.92;DR2=0.933;AF=0.321	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.228:0.091,0.59,0.319	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:0.775:0.384,0.457,0.159	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.709:0.417,0.457,0.126	0|0:0:1,0,0	1|1:1.742:0.01,0.238,0.752	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.7:0.423,0.455,0.123	1|0:0.7:0.423,0.455,0.123	0|0:0.698:0.424,0.454,0.122	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.702:0.421,0.455,0.123	0|0:0.7:0.423,0.455,0.123	0|0:0.7:0.423,0.455,0.123	0|0:0:1,0,0	0|0:0.702:0.421,0.455,0.123	0|0:0.7:0.423,0.455,0.123	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.952:0,0.048,0.952	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.824:0.005,0.166,0.829	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.877:0.126,0.871,0.003	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.926:0.005,0.065,0.931	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.735:0.4,0.464,0.136	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.7:0.423,0.455,0.123	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|1:0.7:0.423,0.455,0.123	1|0:0.7:0.423,0.455,0.123	1|0:0.625:0.469,0.436,0.095	0|0:0.729:0.404,0.463,0.133	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.702:0.421,0.455,0.123	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.832:0.212,0.745,0.044	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.698:0.424,0.454,0.122	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	1|1:1.843:0.006,0.144,0.849	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.7:0.423,0.455,0.123	0|0:0:1,0,0	0|0:0.7:0.423,0.455,0.123	0|1:0.7:0.423,0.455,0.123	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.7:0.423,0.455,0.123	0|1:0.7:0.423,0.455,0.123	0|0:0:1,0,0	1|1:0.7:0.423,0.455,0.123	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.812:0.002,0.184,0.814	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15871283	SNP-3.15869929.	C	A	.	PASS	AR2=0.995;DR2=0.996;AF=0.485	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.069:0.933,0.066,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.188:0.821,0.171,0.008	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.096:0.906,0.092,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.045:0,0.955,0.045	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.084:0.918,0.08,0.002	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.062:0.938,0.061,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.344:0.672,0.313,0.015	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.98,0.02,0	0|0:0.101:0.901,0.097,0.002	0|0:0.026:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15871582	SNP-3.15870228.	C	A	.	PASS	AR2=1;DR2=1;AF=0.461	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.984:0,0.015,0.985	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.002:0.009,0.981,0.011	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15872706	SNP-3.15871352.	C	A	.	PASS	AR2=1;DR2=1;AF=0.457	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15873707	SNP-3.15872353.	C	A	.	PASS	AR2=0.997;DR2=0.997;AF=0.33	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.051:0.95,0.049,0.001	1|1:2:0,0,1	1|1:1.95:0.001,0.048,0.951	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.942,0.057,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.97:0,0.029,0.971	0|0:0:1,0,0	0|0:0.054:0.947,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.93,0.069,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.088:0.914,0.085,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.06:0.942,0.057,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.069:0.933,0.066,0.001	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.94,0.059,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.059:0.942,0.057,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15874648	SNP-3.15873294.	C	A	.	PASS	AR2=1;DR2=1;AF=0.465	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15877499	SNP-3.15876145.	C	A	.	PASS	AR2=1;DR2=1;AF=0.461	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15877965	SNP-3.15876611.	C	A	.	PASS	AR2=1;DR2=1;AF=0.463	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15881921	SNP-3.15880567.	C	A	.	PASS	AR2=0.987;DR2=0.989;AF=0.309	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.783:0.011,0.195,0.794	1|1:1.801:0.008,0.183,0.809	1|0:1:0,1,0	0|0:0.034:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.109:0.898,0.095,0.007	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.841:0.004,0.15,0.845	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0.019:0.981,0.019,0	1|1:1.766:0.012,0.209,0.778	1|0:0.923:0.135,0.808,0.057	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.022:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.742:0.016,0.226,0.758	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.779:0.011,0.199,0.79	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.924:0,0.075,0.924	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.877:0.003,0.117,0.88	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.931:0.001,0.068,0.931	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.145:0.863,0.13,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.04:0.96,0.039,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.98,0.02,0	0|0:0.037:0.963,0.037,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.019:0.981,0.019,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.031:0.969,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.727:0.019,0.235,0.746	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15883684	SNP-3.15882330.	A	G	.	PASS	AR2=0.929;DR2=0.942;AF=0.459	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.657:0.025,0.293,0.682	0|0:0:1,0,0	1|1:1.725:0.021,0.234,0.746	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.641:0.036,0.288,0.677	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.149:0.851,0.149,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.781:0.014,0.191,0.795	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.644:0.034,0.288,0.678	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.736:0.017,0.231,0.753	1|1:1.766:0.014,0.206,0.78	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.655:0.03,0.284,0.686	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.672:0.028,0.273,0.7	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.599:0.048,0.304,0.647	1|1:1.746:0.016,0.221,0.763	1|1:1.742:0.014,0.229,0.756	1|1:1.751:0.018,0.213,0.769	1|1:1.722:0.019,0.241,0.74	1|1:1.61:0.039,0.312,0.649	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.779:0.015,0.19,0.795	1|1:2:0,0,1	1|1:1.639:0.033,0.296,0.672	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.691:0.025,0.258,0.717	1|1:1.33:0.079,0.512,0.409	1|1:2:0,0,1	1|0:0.893:0.107,0.893,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.705:0.024,0.248,0.728	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.793:0.009,0.189,0.802	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.73:0.017,0.235,0.747	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.838:0.004,0.154,0.842	1|1:1.736:0.021,0.222,0.757	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.934:0.004,0.057,0.938	0|0:0:1,0,0	0|1:0.849:0.151,0.849,0	0|0:0:1,0,0	1|1:1.686:0.025,0.264,0.711	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.664:0.028,0.281,0.691	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.676:0.025,0.274,0.701	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.737:0.014,0.235,0.751	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.674:0.028,0.271,0.702	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.979:0,0.021,0.979	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.794:0.013,0.18,0.807	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.681:0.025,0.269,0.706	1|1:2:0,0,1	1|1:1.774:0.011,0.203,0.786	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.819:0.019,0.144,0.837	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.687:0.022,0.269,0.709	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.7:0.019,0.261,0.719	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.601:0.039,0.32,0.641	1|1:1.761:0.011,0.216,0.772	1|1:1.722:0.02,0.238,0.742	1|1:2:0,0,1	1|1:1.64:0.033,0.294,0.673	1|1:1.705:0.025,0.244,0.73	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:1.838:0.007,0.148,0.845	1|1:2:0,0,1	1|1:1.751:0.015,0.22,0.766	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.697:0.031,0.241,0.728	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.796:0.01,0.184,0.806	1|1:2:0,0,1	1|1:1.79:0.011,0.187,0.802	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.807:0.008,0.176,0.816	1|1:2:0,0,1	1|1:1.79:0.01,0.19,0.8	1|1:2:0,0,1	1|1:1.731:0.025,0.22,0.755	1|1:1.547:0.057,0.339,0.604	1|1:2:0,0,1	1|1:1.721:0.019,0.241,0.74	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.594:0.042,0.322,0.636	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.598:0.039,0.323,0.638	0|0:0:1,0,0	1|1:1.56:0.05,0.341,0.609	1|1:1.65:0.032,0.287,0.681	0|0:0:1,0,0	1|1:2:0,0,1
+3	15884489	SNP-3.15883135.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.46	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.038:0.962,0.037,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.962:0,0.037,0.962	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.024:0.976,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.973,0.027,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0.011:0.989,0.01,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|1:0.994:0.022,0.962,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.027,0.973	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.996:0.01,0.984,0.006	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.026:0.974,0.025,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.025:0.976,0.024,0	0|0:0.029:0.971,0.028,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.964:0,0.035,0.965	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.019:0.981,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15886037	SNP-3.15884683.	C	A	.	PASS	AR2=0.876;DR2=0.905;AF=0.297	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.11:0.236,0.418,0.346	1|1:1.391:0.092,0.424,0.484	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.052:0.231,0.486,0.283	0|1:1.364:0.101,0.434,0.465	0|0:0.215:0.8,0.186,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.741:0.02,0.22,0.76	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.12:0.196,0.489,0.316	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.278:0.738,0.245,0.016	0|1:0.459:0.577,0.387,0.036	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.596:0.498,0.409,0.093	0|0:0:1,0,0	1|0:0.778:0.374,0.474,0.152	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.754:0.389,0.467,0.144	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.638:0.461,0.44,0.099	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.526:0.548,0.378,0.074	1|0:0.929:0.317,0.437,0.246	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.196:0.814,0.175,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.249:0.766,0.22,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.24:0.774,0.212,0.014	0|0:0.179:0.83,0.16,0.009	0|0:0.206:0.804,0.186,0.01	0|0:0:1,0,0	0|0:0.181:0.826,0.168,0.007	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.191:0.818,0.173,0.009	0|0:0:1,0,0	0|0:0.269:0.754,0.223,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.514:0.555,0.375,0.07	0|0:0:1,0,0	0|0:0.32:0.723,0.234,0.043	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.727:0.405,0.463,0.132	0|0:0:1,0,0	0|1:0.656:0.344,0.656,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.194:0.816,0.174,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.52:0.553,0.374,0.073	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.805:0.356,0.482,0.162	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.527:0.563,0.348,0.089	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.706:0.419,0.456,0.125	1|0:0.835:0.347,0.471,0.182	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.134:0.871,0.124,0.005	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.768:0.375,0.482,0.143	0|0:0.652:0.454,0.441,0.106	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.021:0.267,0.444,0.289	0|0:0.242:0.773,0.212,0.015	0|1:0.89:0.308,0.493,0.198	0|0:0:1,0,0	1|1:1.843:0.019,0.12,0.862	0|0:0.757:0.389,0.466,0.145	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.748:0.381,0.49,0.129	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.044:0.957,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.118:0.197,0.489,0.315	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.406:0.088,0.417,0.495	1|1:1.272:0.14,0.449,0.411	1|0:0.824:0.357,0.462,0.181	1|1:2:0,0,1	1|0:0.513:0.563,0.36,0.076	1|0:0.641:0.466,0.426,0.107	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.579:0.506,0.409,0.085	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.789:0.358,0.495,0.147	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15886252	SNP-3.15884898.	C	A	.	PASS	AR2=0.957;DR2=0.968;AF=0.271	GT:DS:GP	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1.554:0.033,0.381,0.586	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.932,0.067,0.001	0|0:0.046:0.955,0.045,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.669:0.032,0.268,0.701	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.317:0.085,0.512,0.402	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.532:0.469,0.531,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:1.5:0.073,0.355,0.573	1|1:1.813:0,0.186,0.813	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	0|1:1:0,1,0	1|0:1.09:0.166,0.577,0.256	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.758:0.012,0.218,0.77	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:0.693:0.307,0.692,0.001	1|1:1.626:0.021,0.332,0.647	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.583:0.052,0.312,0.635	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.741:0.008,0.243,0.749	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.225:0.154,0.467,0.379	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.047:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.59:0.047,0.315,0.637	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.435:0.062,0.441,0.497	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.428:0.09,0.392,0.518	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0.047:0.953,0.046,0.001	0|0:0:1,0,0	1|1:1.773:0.017,0.193,0.79	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.96:0,0.039,0.961	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.942:0,0.058,0.942	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	15886445	SNP-3.15885091.	C	A	.	PASS	AR2=0.938;DR2=0.951;AF=0.248	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1.302:0.118,0.462,0.42	1|1:1.349:0.105,0.441,0.454	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.61:0.002,0.386,0.612	1|1:2:0,0,1	0|1:1.225:0.144,0.486,0.369	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.136:0.184,0.495,0.32	1|0:1.253:0.136,0.474,0.39	0|0:0:1,0,0	1|0:1.241:0.143,0.473,0.384	1|1:2:0,0,1	0|1:1.093:0.198,0.511,0.291	0|1:1.097:0.199,0.505,0.296	1|1:1.638:0.004,0.354,0.642	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.842:0.001,0.156,0.843	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.808:0.018,0.156,0.826	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.483:0.054,0.408,0.538	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.177:0.163,0.497,0.34	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.576:0.034,0.356,0.61	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.241:0.137,0.484,0.379	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.438:0.084,0.394,0.522	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.172:0.165,0.499,0.337	0|0:0:1,0,0	1|1:1.249:0.157,0.438,0.406	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.914:0.002,0.082,0.916	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.542:0.062,0.335,0.603	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15897972	SNP-3.15896618.	C	A	.	PASS	AR2=0.986;DR2=0.989;AF=0.447	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.864:0.005,0.127,0.868	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.785:0.012,0.191,0.797	1|1:1.856:0.005,0.133,0.861	1|1:2:0,0,1	0|1:1.59:0.043,0.323,0.634	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.612:0.038,0.312,0.65	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:1.802:0.01,0.178,0.812	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.919:0.002,0.077,0.921	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.925:0.002,0.072,0.926	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.939:0.001,0.059,0.94	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.951:0.001,0.048,0.951	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.944:0.001,0.055,0.944	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.957:0.044,0.955,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.945:0,0.055,0.945	1|1:1.922:0.001,0.075,0.924	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.6:0.041,0.318,0.641	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.802:0.01,0.178,0.812	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:1.59:0.043,0.323,0.634	1|1:2:0,0,1	1|1:1.868:0.004,0.123,0.873	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15898240	SNP-3.15896886.	C	A	.	PASS	AR2=0.992;DR2=0.993;AF=0.355	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.949:0,0.051,0.949	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.944,0.054,0.001	0|0:0:1,0,0	0|0:0.029:0.972,0.027,0.001	0|0:0.029:0.971,0.028,0	1|1:2:0,0,1	0|0:0.111:0.894,0.102,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.168:0.832,0.168,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.956,0.042,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.951,0.048,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.036:0.006,0.951,0.043	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.935,0.064,0.001	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.059:0.941,0.058,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.052:0.949,0.051,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.174:0.835,0.156,0.009	1|1:2:0,0,1	0|0:0.06:0.941,0.058,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.147:0.86,0.134,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.935,0.064,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.942,0.057,0.001	0|0:0.071:0.93,0.068,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.965,0.034,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.111:0.894,0.102,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.05,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.046:0.955,0.045,0	0|0:0.039:0.962,0.037,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15900299	SNP-3.15898945.	C	A	.	PASS	AR2=0.914;DR2=0.928;AF=0.478	GT:DS:GP	0|0:0.222:0.791,0.196,0.013	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.723:0.02,0.237,0.743	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.181:0.161,0.496,0.342	0|0:0:1,0,0	0|0:0.272:0.746,0.235,0.018	0|0:0.444:0.619,0.319,0.062	1|0:1.189:0.163,0.484,0.352	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.655:0.043,0.258,0.699	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.038:0.235,0.492,0.273	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.232:0.782,0.205,0.013	1|1:1.936:0.002,0.06,0.938	1|1:2:0,0,1	0|0:0.58:0.608,0.204,0.188	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.265:0.752,0.23,0.018	0|0:0:1,0,0	0|0:0.439:0.627,0.308,0.065	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.364:0.667,0.301,0.031	0|0:0.266:0.753,0.229,0.018	1|1:2:0,0,1	1|0:1.013:0.116,0.755,0.129	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.27:0.748,0.234,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.263:0.753,0.231,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.258:0.759,0.224,0.017	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.474:0.569,0.388,0.043	0|0:0.171:0.838,0.153,0.009	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.708:0.023,0.246,0.731	1|1:2:0,0,1	0|0:0.233:0.78,0.207,0.013	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.459:0.58,0.382,0.038	1|1:1.793:0.012,0.182,0.806	1|1:2:0,0,1	1|1:1.718:0.015,0.251,0.734	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.265:0.753,0.229,0.018	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.947:0.001,0.051,0.948	1|1:1.867:0.003,0.127,0.87	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.792:0.008,0.191,0.801	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.85:0.004,0.142,0.854	1|1:2:0,0,1	1|0:1.174:0.167,0.491,0.341	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.923:0.003,0.072,0.925	0|0:0:1,0,0	0|0:0.253:0.763,0.22,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.001:0.238,0.522,0.24	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.055:0.227,0.491,0.282	0|0:0.28:0.739,0.241,0.019	0|0:0:1,0,0	0|0:0.25:0.765,0.221,0.015	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.235:0.779,0.208,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.288:0.732,0.247,0.02	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.716:0.019,0.246,0.735	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.954:0.267,0.511,0.221	0|0:0:1,0,0	0|0:0.263:0.753,0.231,0.016	0|0:0:1,0,0	0|1:0.39:0.643,0.323,0.034	1|1:2:0,0,1	0|0:0.265:0.754,0.227,0.019	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.282:0.738,0.243,0.02	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.719:0.017,0.246,0.736	0|0:0:1,0,0	1|1:1.818:0.008,0.166,0.826	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.881:0.001,0.118,0.882	0|0:0:1,0,0	0|0:0.239:0.775,0.211,0.014	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.176:0.834,0.156,0.01	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.054:0.227,0.491,0.282	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.303:0.123,0.452,0.426	0|0:0.559:0.556,0.328,0.116	0|0:0:1,0,0	1|0:1.032:0.238,0.491,0.27	0|0:0:1,0,0	0|0:0.363:0.704,0.229,0.067	1|1:1.822:0.01,0.158,0.832	0|0:0.209:0.805,0.181,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.194:0.818,0.169,0.012	0|0:0.227:0.786,0.201,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.192:0.819,0.17,0.011	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.272:0.747,0.234,0.019	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.238:0.778,0.206,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15902939	SNP-3.15901585.	C	A	.	PASS	AR2=0.982;DR2=0.984;AF=0.493	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.164:0.844,0.148,0.008	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.146:0.862,0.131,0.007	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.254:0.765,0.217,0.019	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.134:0.871,0.125,0.004	0|0:0.121:0.882,0.115,0.003	1|1:2:0,0,1	0|0:0.203:0.807,0.182,0.01	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.142:0.863,0.133,0.005	0|0:0:1,0,0	1|1:1.94:0.001,0.058,0.941	1|0:0.903:0.162,0.773,0.065	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.01:0.044,0.901,0.054	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.783:0.012,0.192,0.795	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.901:0.002,0.095,0.903	1|1:1.923:0.001,0.075,0.924	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.047:0.954,0.046,0	0|0:0.116:0.888,0.107,0.004	0|0:0:1,0,0	1|1:1.985:0,0.014,0.986	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.05:0.033,0.884,0.083	1|1:1.939:0,0.061,0.939	0|0:0.175:0.833,0.159,0.008	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.215:0.797,0.19,0.013	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.174:0.833,0.159,0.008	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.127:0.879,0.115,0.006	0|0:0:1,0,0	0|0:0.137:0.867,0.128,0.005	0|0:0:1,0,0	1|1:1.982:0,0.017,0.982	0|0:0.146:0.858,0.138,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.151:0.855,0.139,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.882:0.003,0.113,0.885	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.937:0.001,0.061,0.938	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.166:0.841,0.152,0.007	0|0:0.188:0.821,0.17,0.009	0|0:0.138:0.868,0.126,0.006	0|0:0.204:0.807,0.183,0.011	1|1:2:0,0,1	0|0:0:1,0,0
+3	15903204	SNP-3.15901850.	C	A	.	PASS	AR2=0.956;DR2=0.964;AF=0.446	GT:DS:GP	0|0:0.08:0.922,0.077,0.001	1|1:2:0,0,1	0|0:0.091:0.912,0.086,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.832:0.005,0.157,0.838	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.088:0.914,0.084,0.002	0|0:0.088:0.914,0.085,0.002	0|0:0:1,0,0	1|1:1.784:0.012,0.193,0.796	1|1:1.947:0.001,0.052,0.948	1|1:2:0,0,1	0|0:0.069:0.933,0.065,0.002	1|1:2:0,0,1	1|1:1.254:0.245,0.256,0.499	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.097:0.905,0.092,0.002	0|0:0:1,0,0	1|1:1.707:0.022,0.248,0.73	1|1:1.727:0.024,0.226,0.751	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.895:0.004,0.097,0.899	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.088:0.914,0.084,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.125:0.879,0.117,0.004	0|1:1.041:0.297,0.364,0.338	0|0:0.109:0.894,0.103,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.821:0.008,0.163,0.829	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.921,0.077,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.109:0.893,0.104,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.1:0.902,0.095,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.098:0.905,0.093,0.002	0|0:0:1,0,0	0|0:0.113:0.89,0.107,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.969:0,0.031,0.969	1|1:1.598:0.059,0.285,0.657	1|1:1.973:0,0.027,0.973	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.68:0.028,0.265,0.707	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.628:0.026,0.32,0.654	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.87:0.005,0.12,0.875	1|1:1.737:0.014,0.235,0.751	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.965:0.102,0.831,0.067	1|1:1.782:0.006,0.207,0.788	0|0:0.104:0.899,0.099,0.003	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.852:0.007,0.134,0.859	1|1:1.832:0.005,0.158,0.837	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.087:0.915,0.084,0.001	1|1:1.842:0.004,0.149,0.846	0|0:0:1,0,0	1|1:1.967:0,0.033,0.967	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.108:0.894,0.103,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.891:0.004,0.101,0.895	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.922:0.003,0.071,0.926	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.863:0.002,0.133,0.865	1|1:1.723:0.017,0.244,0.739	1|1:1.641:0.027,0.305,0.668	1|1:1.752:0.015,0.219,0.767	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.121:0.882,0.115,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.101:0.901,0.096,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.782:0.012,0.195,0.794	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.075:0.927,0.071,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.07:0.931,0.067,0.001	1|1:2:0,0,1	0|0:0.074:0.928,0.07,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.966:0,0.033,0.967	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.048:0.953,0.046,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.077:0.925,0.073,0.002	0|0:0:1,0,0	0|0:0.656:0.562,0.219,0.219	0|0:0.126:0.878,0.118,0.004	1|1:2:0,0,1	0|0:0:1,0,0
+3	15903642	SNP-3.15902288.	C	A	.	PASS	AR2=0.997;DR2=0.998;AF=0.325	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.188:0.833,0.145,0.022	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.034:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.951,0.048,0.001	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.827:0.005,0.162,0.833	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.054:0.946,0.053,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15904461	SNP-3.15903107.	C	A	.	PASS	AR2=0.99;DR2=0.99;AF=0.469	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.932:0.001,0.066,0.933	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.981:0,0.019,0.981	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.836:0.002,0.161,0.837	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0	1|1:1.941:0.001,0.056,0.943	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.01,0.989	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.829:0.009,0.153,0.838	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.925:0.002,0.072,0.926	0|0:0:1,0,0	0|0:0.04:0.961,0.038,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.041:0.96,0.04,0.001	0|0:0.028:0.972,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.014:0.003,0.981,0.016	0|0:0.028:0.972,0.027,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.969,0.031,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0.063:0.938,0.061,0.001	0|1:1.261:0.02,0.699,0.281	0|0:0.056:0.944,0.055,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.02:0.98,0.02,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.049:0.951,0.048,0	1|1:1.945:0.001,0.054,0.945	1|1:2:0,0,1	1|1:1.948:0.001,0.05,0.949	1|1:1.943:0.001,0.056,0.943	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0,0.031,0.969	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.006:0.029,0.935,0.036	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.047:0.954,0.045,0.001	1|1:1.954:0.001,0.044,0.955	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.955:0.001,0.044,0.956	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.933:0,0.067,0.933	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.057:0.944,0.055,0.001	0|0:0:1,0,0	0|0:0.06:0.941,0.058,0.001	0|0:0:1,0,0	1|1:1.987:0,0.012,0.988	1|1:1.957:0,0.043,0.957	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.037:0.964,0.036,0.001	0|0:0:1,0,0	0|0:0.041:0.959,0.04,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.961,0.038,0.001	0|0:0:1,0,0	1|1:1.954:0,0.045,0.954	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.066:0.934,0.065,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	1|1:1.835:0.015,0.134,0.85	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.957,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.08:0.922,0.076,0.002	0|0:0:1,0,0	0|0:0:1,0,0
+3	15907342	SNP-3.15905988.	C	A	.	PASS	AR2=0.997;DR2=0.998;AF=0.436	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.432:0.003,0.562,0.435	1|1:1.776:0.008,0.208,0.784	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.974:0,0.026,0.974	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15910577	SNP-3.15909223.	C	A	.	PASS	AR2=1;DR2=1;AF=0.321	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15912349	SNP-3.15910995.	C	A	.	PASS	AR2=0.982;DR2=0.987;AF=0.431	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.893:0.003,0.101,0.896	1|1:1.856:0.002,0.141,0.858	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.848:0.006,0.14,0.854	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.885:0.005,0.106,0.89	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.86:0.005,0.129,0.865	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.816:0,0.184,0.816	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.419:0.022,0.536,0.442	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.961:0,0.039,0.961	0|1:1:0,1,0	1|1:1.685:0.01,0.295,0.695	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.942:0,0.057,0.942	1|0:1:0,1,0	1|1:1.734:0.004,0.257,0.739	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.877:0.003,0.118,0.88	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.86:0.005,0.129,0.865	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.277:0.212,0.299,0.489	1|1:1.864:0.006,0.124,0.87	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.732:0.012,0.244,0.744	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.891:0,0.108,0.892	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.169:0.057,0.716,0.227	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15912431	SNP-3.15911077.	C	A	.	PASS	AR2=0.975;DR2=0.981;AF=0.276	GT:DS:GP	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.537:0.055,0.352,0.593	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.5:0.06,0.38,0.56	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.813:0.188,0.812,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.642:0.027,0.304,0.669	1|1:1.891:0.001,0.106,0.893	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.931:0.002,0.066,0.933	1|1:1.689:0.022,0.267,0.711	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.643:0.033,0.29,0.677	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.9:0.006,0.089,0.905	0|0:0:1,0,0	1|1:1.92:0.001,0.078,0.921	1|0:1:0,1,0	1|1:1.766:0.009,0.216,0.775	0|0:0:1,0,0	1|1:1.809:0.006,0.18,0.815	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:0.899:0.222,0.657,0.121	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.532:0.057,0.355,0.588	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.963:0.001,0.036,0.964	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.735:0.03,0.205,0.765	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.9:0.002,0.095,0.902	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	15915064	SNP-3.15913710.	C	A	.	PASS	AR2=1;DR2=1;AF=0.374	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.003:0.005,0.988,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15915708	SNP-3.15914354.	A	G	.	PASS	AR2=0.947;DR2=0.959;AF=0.403	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.162:0.844,0.149,0.007	1|1:1.679:0.026,0.269,0.705	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.682:0.025,0.268,0.707	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.312:0.087,0.514,0.399	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.729:0.018,0.234,0.747	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.709:0.022,0.248,0.73	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.729:0.018,0.235,0.747	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.679:0.025,0.27,0.704	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.955:0.001,0.043,0.956	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.732:0.018,0.232,0.75	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.721:0.02,0.239,0.741	1|1:1.717:0.02,0.243,0.737	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.745:0.02,0.215,0.765	1|1:1.972:0,0.027,0.973	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.996:0.209,0.587,0.204	1|1:2:0,0,1	1|1:1.729:0.018,0.235,0.747	1|1:1.724:0.019,0.238,0.743	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.713:0.02,0.246,0.733	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.135:0.87,0.126,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.644:0.033,0.29,0.677	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.727:0.018,0.236,0.746	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.654:0.029,0.287,0.683	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.744:0.486,0.284,0.23	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.686:0.025,0.264,0.711	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:1.738:0.017,0.227,0.755	1|0:1:0,1,0	1|1:1.635:0.032,0.3,0.668	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.643:0.041,0.275,0.684	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.726:0.018,0.238,0.744	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.747:0.02,0.214,0.767	1|1:1.708:0.02,0.252,0.728	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.538:0.046,0.369,0.584	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.697:0.023,0.258,0.719	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.771:0.014,0.2,0.785	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.711:0.022,0.245,0.733	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15916013	SNP-3.15914659.	C	A	.	PASS	AR2=0.989;DR2=0.991;AF=0.336	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.916:0.002,0.08,0.918	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.886:0.004,0.106,0.89	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.913:0.087,0.913,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.779:0.009,0.204,0.788	1|1:1.785:0.012,0.191,0.797	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.827:0.005,0.162,0.832	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.606:0.395,0.605,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.97:0,0.029,0.97	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.942:0.001,0.056,0.943	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.671:0.028,0.273,0.699	1|1:1.65:0.029,0.292,0.679	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.84:0.006,0.148,0.846	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15917390	SNP-3.15916036.	C	A	.	PASS	AR2=1;DR2=1;AF=0.374	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.969,0.031,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.009:0.991,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15917486	SNP-3.15916132.	C	A	.	PASS	AR2=0.997;DR2=0.997;AF=0.502	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.785:0.009,0.197,0.794	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.825:0.005,0.165,0.83	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.834:0.004,0.158,0.838	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.856:0.005,0.134,0.861	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.95:0.002,0.046,0.952	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15917567	SNP-3.15916213.	C	A	.	PASS	AR2=0.996;DR2=0.996;AF=0.374	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.071:0.929,0.07,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.021:0.041,0.897,0.062	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.092:0.91,0.088,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.12:0.883,0.113,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.142:0.863,0.131,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	0|0:0.108:0.898,0.096,0.006	0|0:0.028:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.839:0.007,0.147,0.846	0|0:0:1,0,0
+3	15917764	SNP-3.15916410.	C	A	.	PASS	AR2=1;DR2=1;AF=0.381	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15919165	SNP-3.15917811.	C	A	.	PASS	AR2=0.974;DR2=0.98;AF=0.469	GT:DS:GP	0|0:0.189:0.822,0.166,0.011	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.886:0.005,0.105,0.891	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.257:0.76,0.222,0.018	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.252:0.764,0.219,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.464:0.596,0.343,0.06	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.192:0.817,0.174,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.226:0.8,0.174,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.95:0.001,0.049,0.951	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.633:0.009,0.349,0.642	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.028,0.972	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.227:0.786,0.201,0.013	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.211:0.8,0.188,0.012	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.213:0.798,0.191,0.011	1|1:2:0,0,1	0|0:0.16:0.845,0.149,0.006	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.448:0.598,0.355,0.046	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.912:0.004,0.079,0.917	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	0|0:0.37:0.675,0.28,0.045	0|0:0:1,0,0	0|0:0.233:0.781,0.205,0.014	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.154:0.854,0.139,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.213:0.799,0.19,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.189:0.819,0.173,0.008	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.219:0.792,0.196,0.012	0|0:0:1,0,0	0|0:0.301:0.724,0.251,0.025	1|1:2:0,0,1	0|0:0:1,0,0
+3	15919943	SNP-3.15918589.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.4	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.97,0.03,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.042:0.959,0.041,0.001	1|1:2:0,0,1	0|0:0.026:0.974,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.016:0,0.984,0.016	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.052:0.949,0.049,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.053:0.948,0.051,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.968,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.969,0.031,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.986,0.014,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.031:0.97,0.03,0	1|1:2:0,0,1	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.038:0.962,0.037,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15921499	SNP-3.15920145.	A	G	.	PASS	AR2=1;DR2=1;AF=0.424	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.989:0,0.011,0.989	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15922395	SNP-3.15921041.	A	G	.	PASS	AR2=0.986;DR2=0.988;AF=0.231	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0.017:0.983,0.017,0	1|1:1.978:0,0.021,0.978	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.111:0.889,0.111,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.369:0.666,0.299,0.035	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.951,0.049,0	0|0:0.005:0.995,0.005,0	0|0:0.034:0.966,0.034,0	0|0:0.113:0.889,0.109,0.002	0|0:0:1,0,0	0|0:0.128:0.874,0.123,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.952,0.046,0.002	0|0:0:1,0,0	1|0:0.724:0.286,0.704,0.01	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.141:0.862,0.135,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.1:0.905,0.091,0.005	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.036:0.965,0.035,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.279:0.725,0.271,0.004	0|0:0:1,0,0	0|0:0.058:0.943,0.055,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.018,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0.039:0.961,0.039,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0.134:0.873,0.12,0.007	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.079:0.921,0.079,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.969,0.031,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15922480	SNP-3.15921126.	C	A	.	PASS	AR2=0.981;DR2=0.986;AF=0.328	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.709:0.022,0.247,0.731	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.748:0.018,0.217,0.765	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.595:0.04,0.325,0.635	1|0:1:0,1,0	0|0:0.001:0.999,0.001,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.663:0.028,0.281,0.691	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.522:0.059,0.361,0.58	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.951:0.001,0.047,0.952	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.516:0.067,0.35,0.583	1|1:1.484:0.131,0.253,0.616	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.845:0.002,0.152,0.846	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.917:0.002,0.08,0.919	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.966:0.001,0.033,0.967	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.684:0.025,0.265,0.71	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	15923846	SNP-3.15922492.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.324	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.287:0,0.713,0.287	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.965,0.034,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15923992	SNP-3.15922638.	A	G	.	PASS	AR2=1;DR2=1;AF=0.481	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.968,0.032,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	15927697	SNP-3.15926343.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.295	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.902:0,0.098,0.902	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.948:0.001,0.05,0.949	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15929137	SNP-3.15927783.	A	G	.	PASS	AR2=0.992;DR2=0.994;AF=0.377	GT:DS:GP	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.038:0.962,0.038,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.019:0.982,0.018,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.959,0.041,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.639:0.478,0.404,0.117	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.918:0.002,0.078,0.92	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.844:0.336,0.484,0.18	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.94,0.06,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.118:0.888,0.107,0.006	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.035:0.965,0.034,0.001	0|0:0:1,0,0	1|1:2:0,0,1
+3	15929691	SNP-3.15928337.	C	A	.	PASS	AR2=0.961;DR2=0.968;AF=0.371	GT:DS:GP	0|0:0.234:0.79,0.186,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.943,0.057,0.001	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	0|0:0.243:0.775,0.206,0.019	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.327:0.7,0.273,0.027	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.101:0.902,0.095,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.222:0.79,0.198,0.012	1|0:1:0,1,0	0|0:0.052:0.949,0.049,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.352:0.678,0.291,0.03	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.113:0.89,0.108,0.002	0|0:0:1,0,0	0|0:0.115:0.887,0.111,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.245:0.759,0.237,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.066:0.934,0.065,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.175:0.832,0.162,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.401:0.634,0.332,0.035	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.889:0.012,0.087,0.901	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.242:0.778,0.202,0.02	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.118:0.883,0.116,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.102:0.901,0.096,0.003	0|0:0.168:0.837,0.157,0.006	0|0:0.346:0.684,0.285,0.03	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.383:0.654,0.31,0.037	1|0:1:0,1,0	0|0:0.342:0.688,0.282,0.03	0|1:1:0,1,0	0|0:0.341:0.689,0.282,0.03	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.296:0.721,0.262,0.017	0|0:0:1,0,0	0|0:0.136:0.87,0.125,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.332:0.696,0.275,0.029	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.313:0.718,0.251,0.031	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.925,0.073,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.26:0.759,0.222,0.019	0|0:0.21:0.805,0.18,0.015	0|0:0.345:0.685,0.284,0.031	1|1:2:0,0,1	0|0:0.338:0.692,0.277,0.03	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.987:0.305,0.403,0.292	1|1:2:0,0,1	0|0:0:1,0,0
+3	15930366	SNP-3.15929012.	C	A	.	PASS	AR2=0.993;DR2=0.993;AF=0.3	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.075:0.929,0.067,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.926,0.072,0.002	1|1:2:0,0,1	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.113:0.89,0.108,0.003	0|0:0:1,0,0	0|0:0.11:0.893,0.104,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0.023:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.109:0.895,0.101,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.937,0.063,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	0|1:1.082:0,0.918,0.082	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.989:0,0.011,0.989	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.134:0.866,0.134,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.925,0.074,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.193:0.815,0.178,0.008	0|0:0:1,0,0	0|0:0.059:0.942,0.057,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.123:0.881,0.115,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.081:0.921,0.077,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.931,0.066,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15931727	SNP-3.15930373.	A	G	.	PASS	AR2=1;DR2=1;AF=0.352	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15931993	SNP-3.15930639.	A	G	.	PASS	AR2=0.984;DR2=0.988;AF=0.409	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.789:0.021,0.169,0.81	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.79:0.01,0.189,0.801	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.853:0.005,0.137,0.858	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.936:0.001,0.062,0.937	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.992:0.067,0.873,0.059	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.78:0.011,0.198,0.791	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.873:0.004,0.119,0.877	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.864:0.006,0.125,0.869	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.957:0.001,0.041,0.958	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.266:0.164,0.405,0.431	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.837:0.007,0.149,0.844	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.869:0.004,0.122,0.874	1|1:1.863:0.005,0.128,0.867	1|1:1.812:0.007,0.175,0.819	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.855:0.005,0.135,0.86	1|1:2:0,0,1	1|1:1.913:0.002,0.083,0.915	1|1:1.963:0.001,0.036,0.963	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.817:0.007,0.169,0.824
+3	15934316	SNP-3.15932962.	C	A	.	PASS	AR2=1;DR2=1;AF=0.284	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15937104	SNP-3.15935750.	C	A	.	PASS	AR2=1;DR2=1;AF=0.29	GT:DS:GP	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15940139	SNP-3.15938785.	C	A	.	PASS	AR2=1;DR2=1;AF=0.253	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	1|1:1.983:0,0.017,0.983	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15941372	SNP-3.15940018.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.228	GT:DS:GP	0|1:1.117:0.071,0.74,0.189	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.972:0,0.028,0.972	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15943543	SNP-3.15942189.	C	A	.	PASS	AR2=1;DR2=1;AF=0.305	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15943766	SNP-3.15942412.	A	G	.	PASS	AR2=0.945;DR2=0.955;AF=0.192	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.941,0.058,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.966:0,0.034,0.966	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.841:0.02,0.12,0.861	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.346:0.683,0.288,0.029	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.22:0.797,0.186,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.237:0.78,0.204,0.017	0|0:0.125:0.88,0.116,0.004	1|1:2:0,0,1	0|0:0.1:0.903,0.094,0.003	1|0:1:0,1,0	1|1:1.824:0.002,0.172,0.826	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0.072:0.93,0.069,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.046:0.955,0.045,0.001	0|0:0.03:0.97,0.03,0	0|0:0:1,0,0	0|0:0.162:0.858,0.122,0.02	1|1:1.837:0.006,0.151,0.843	1|0:0.955:0.13,0.785,0.085	0|0:0.043:0.958,0.042,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.075:0.927,0.072,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.112:0.891,0.106,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.95,0.049,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.781:0.253,0.712,0.034	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.075:0.926,0.074,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.076:0.925,0.074,0.001	0|0:0.064:0.937,0.062,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.296:0.734,0.235,0.031	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.074:0.928,0.07,0.002	0|0:0:1,0,0	0|0:0.266:0.747,0.239,0.014	0|0:0.119:0.886,0.109,0.005	0|0:0:1,0,0	0|0:0.077:0.924,0.074,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.94,0.059,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.137:0.867,0.128,0.004	1|1:2:0,0,1	0|0:0.074:0.928,0.07,0.002	0|0:0:1,0,0	0|1:0.851:0.286,0.577,0.137	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.344:0.685,0.286,0.029	0|0:0.599:0.457,0.487,0.056	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.208:0.797,0.199,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.185:0.824,0.166,0.01	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.308:0.717,0.259,0.024	1|1:2:0,0,1	0|0:0.455:0.603,0.338,0.059	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.594:0.049,0.308,0.643	0|0:0.079:0.924,0.073,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.05,0.001	1|1:2:0,0,1	0|0:0.16:0.85,0.141,0.009	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.969,0.031,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.051:0.95,0.049,0.001	0|0:0.262:0.741,0.256,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	15944709	SNP-3.15943355.	C	A	.	PASS	AR2=0.993;DR2=0.994;AF=0.264	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.915:0.001,0.084,0.916	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.002:0.006,0.986,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.238:0.018,0.726,0.256	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.935:0,0.064,0.935	0|1:1.23:0.024,0.722,0.254	1|1:1.91:0.001,0.089,0.91	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.264:0.01,0.716,0.274	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.256:0.02,0.704,0.276	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15945019	SNP-3.15943665.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.263	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.126:0.874,0.126,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15945110	SNP-3.15943756.	A	G	.	PASS	AR2=0.95;DR2=0.96;AF=0.305	GT:DS:GP	1|1:1.637:0.023,0.317,0.66	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.057:0.943,0.057,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0.001	0|0:0:1,0,0	0|0:0.104:0.896,0.103,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.957,0.043,0.001	0|0:0:1,0,0	0|0:0.07:0.931,0.068,0.001	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.02:0.98,0.02,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.968,0.031,0	0|0:0:1,0,0	1|1:1.643:0.029,0.299,0.672	1|1:2:0,0,1	1|1:1.851:0.007,0.136,0.857	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.723:0.019,0.239,0.742	0|0:0:1,0,0	1|1:1.783:0.014,0.19,0.797	0|0:0.148:0.858,0.135,0.006	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.84:0.008,0.145,0.847	0|0:0:1,0,0	1|1:1.866:0.007,0.121,0.872	0|1:1:0,1,0	1|1:1.837:0.004,0.154,0.842	1|1:2:0,0,1	1|1:1.624:0.031,0.314,0.655	1|1:1.722:0.02,0.238,0.742	1|1:1.84:0.007,0.146,0.847	0|0:0:1,0,0	1|1:1.801:0.01,0.179,0.811	1|1:1.894:0.003,0.1,0.897	0|0:0:1,0,0	1|1:1.808:0.01,0.172,0.818	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.758:0.012,0.217,0.77	1|1:1.832:0.007,0.153,0.839	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.802:0.01,0.178,0.812	0|0:0:1,0,0	1|0:0.68:0.321,0.679,0	1|1:1.786:0.012,0.191,0.798	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.801:0.01,0.18,0.811	0|0:0.025:0.975,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.481:0.097,0.325,0.578	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.938:0.157,0.748,0.095	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.771:0.013,0.203,0.784	1|1:1.767:0.013,0.206,0.78	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.881:0.003,0.112,0.884	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.743:0.015,0.228,0.757	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.142:0.27,0.319,0.411	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.143:0.86,0.138,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.937,0.061,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.601:0.028,0.342,0.629	1|1:2:0,0,1	1|1:1.787:0.011,0.191,0.798	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.928,0.072,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.743:0.017,0.224,0.76	1|1:1.862:0.004,0.131,0.865	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.944,0.055,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.88:0.003,0.114,0.883	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.833:0.009,0.15,0.841	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.835:0.011,0.143,0.846	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.951,0.048,0	1|1:2:0,0,1
+3	15946086	SNP-3.15944732.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.296	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.074:0.928,0.07,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1.056:0,0.944,0.056	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.032:0.969,0.031,0	0|0:0:1,0,0	0|0:0.045:0.956,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15947339	SNP-3.15945985.	C	A	.	PASS	AR2=0.934;DR2=0.953;AF=0.407	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.375:0.656,0.313,0.031	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.368:0.676,0.28,0.044	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.084:0.919,0.078,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.968,0.032,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.371:0.662,0.305,0.033	0|1:1:0,1,0	0|0:0.291:0.732,0.246,0.023	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.336:0.693,0.279,0.029	0|0:0:1,0,0	0|0:0.276:0.745,0.234,0.021	0|0:0.562:0.528,0.382,0.09	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.249:0.767,0.216,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.346:0.683,0.288,0.029	0|0:0:1,0,0	0|0:0.337:0.692,0.279,0.029	0|0:0.339:0.69,0.281,0.029	0|0:0.329:0.698,0.275,0.027	0|0:0:1,0,0	0|0:0.367:0.667,0.299,0.034	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.376:0.659,0.306,0.035	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.305:0.724,0.248,0.029	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.31:0.713,0.265,0.022	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.074:0.926,0.074,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.369:0.663,0.304,0.033	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.389:0.649,0.313,0.038	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.953,0.046,0.001	0|1:0.675:0.384,0.557,0.059	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0.302:0.72,0.258,0.022	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.339:0.69,0.281,0.029	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.943,0.056,0.001	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.365:0.664,0.307,0.029	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.296:0.727,0.251,0.022	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.136:0.868,0.128,0.004	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.514:0.574,0.337,0.088	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.931:0.361,0.347,0.292	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.67:0.449,0.432,0.119	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.242:0.773,0.213,0.015	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.301:0.721,0.256,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.339:0.69,0.281,0.029	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.28:0.745,0.23,0.025	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15947702	SNP-3.15946348.	A	G	.	PASS	AR2=1;DR2=1;AF=0.224	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15947731	SNP-3.15946377.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.224	GT:DS:GP	0|0:0.19:0.811,0.188,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.956,0.044,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.129:0.874,0.124,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15948026	SNP-3.15946672.	C	A	.	PASS	AR2=1;DR2=1;AF=0.247	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	15950880	SNP-3.15949526.	C	A	.	PASS	AR2=0.994;DR2=0.994;AF=0.278	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.904:0.001,0.094,0.905	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.943:0.001,0.054,0.944	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.762:0.006,0.225,0.769	1|1:1.984:0,0.015,0.985	1|1:1.975:0,0.024,0.975	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.026,0.974	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.97:0,0.03,0.97	1|1:1.976:0,0.024,0.976	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.911:0.002,0.085,0.913	1|1:1.966:0,0.033,0.967	1|1:1.962:0,0.038,0.962	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.931:0.001,0.068,0.931	0|0:0.002:0.998,0.002,0	1|1:1.953:0,0.046,0.953	0|0:0:1,0,0	1|1:1.934:0.001,0.064,0.935	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.951:0,0.049,0.951	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.934:0.001,0.064,0.935	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.956:0.001,0.043,0.956	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.977:0.001,0.022,0.977	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.902:0.002,0.095,0.904	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.934:0.001,0.065,0.935	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.962:0,0.037,0.962	0|0:0:1,0,0
+3	15953451	SNP-3.15952097.	C	A	.	PASS	AR2=0.995;DR2=0.996;AF=0.307	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.905,0.092,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.143:0.864,0.129,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.098:0.904,0.094,0.002	0|0:0.098:0.905,0.093,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.123:0.88,0.116,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.126:0.878,0.118,0.004	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.111:0.892,0.105,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.157:0.848,0.146,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15954887	SNP-3.15953533.	A	G	.	PASS	AR2=0.99;DR2=0.992;AF=0.398	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.959:0.001,0.039,0.96	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:1.902:0.003,0.093,0.904	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.125:0.879,0.117,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.084:0.917,0.081,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.146:0.859,0.136,0.005	1|1:2:0,0,1	0|0:0.249:0.763,0.226,0.012	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.08:0.921,0.078,0.001	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.124:0.88,0.116,0.004	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.091:0.91,0.088,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.16:0.846,0.147,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.15:0.856,0.139,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0.001,0.03,0.969	1|1:1.747:0.025,0.204,0.772	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.793:0.004,0.199,0.797	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.885:0.003,0.109,0.888	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	15955221	SNP-3.15953867.	A	G	.	PASS	AR2=0.899;DR2=0.926;AF=0.271	GT:DS:GP	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	1|1:1.68:0.03,0.26,0.71	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.752:0.017,0.215,0.769	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.38:0.097,0.426,0.477	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.647:0.036,0.282,0.682	1|1:1.344:0.123,0.411,0.466	1|1:2:0,0,1	1|1:1.474:0.069,0.387,0.543	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.193:0.187,0.433,0.38	1|1:2:0,0,1	0|1:1.409:0.045,0.5,0.454	1|1:2:0,0,1	1|1:1.659:0.034,0.274,0.692	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.176:0.183,0.458,0.359	0|1:1.426:0.077,0.421,0.503	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.057:0.241,0.461,0.298	0|0:0:1,0,0	0|0:0.973:0.268,0.491,0.241	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.463:0.538,0.46,0.002	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.001:0.999,0.001,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:1.747:0.017,0.219,0.764	1|1:2:0,0,1	1|1:1.66:0.026,0.288,0.686	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.333:0.09,0.487,0.423	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.427:0.083,0.407,0.51	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.36:0.103,0.433,0.464	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.776:0.016,0.192,0.792	1|1:1.573:0.048,0.332,0.62	0|1:1.247:0.177,0.398,0.424	1|1:2:0,0,1	1|1:1.309:0.105,0.481,0.414	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.262:0.094,0.549,0.356	1|1:1.769:0.017,0.197,0.786	1|1:1.174:0.22,0.387,0.393	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.002:0.998,0.002,0	0|1:1.506:0.061,0.372,0.567	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.791:0.377,0.456,0.168	1|1:2:0,0,1	1|0:1.14:0.205,0.45,0.345	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:1.212:0.158,0.472,0.37	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.989:0.243,0.524,0.233	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.633:0.486,0.394,0.119	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.418:0.058,0.466,0.476	1|1:1.589:0.053,0.304,0.642	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:1.717:0.021,0.24,0.738	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.772:0.017,0.195,0.788	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0
+3	15956001	SNP-3.15954647.	C	A	.	PASS	AR2=0.961;DR2=0.968;AF=0.225	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.025,0	0|0:0.022:0.978,0.022,0	0|0:0.018:0.982,0.018,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0.022:0.978,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1.166:0.123,0.589,0.288	0|1:1.389:0.038,0.535,0.427	0|0:0.024:0.976,0.024,0	1|0:0.767:0.384,0.465,0.151	1|0:1:0,1,0	0|1:1.161:0.143,0.553,0.304	1|0:1.183:0.11,0.597,0.293	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.173:0.117,0.592,0.291	1|0:1:0,1,0	0|0:0.007:0.993,0.007,0	1|1:1.926:0.002,0.071,0.927	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.239:0.103,0.555,0.342	0|0:0.021:0.979,0.021,0	1|1:1.869:0.002,0.127,0.871	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.139:0.165,0.53,0.305	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.367:0.048,0.538,0.415	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	1|1:2:0,0,1	1|0:1.428:0.06,0.452,0.488	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.025:0.975,0.025,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	1|1:1.894:0.004,0.099,0.898	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.831:0.007,0.154,0.839	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.014:0.986,0.014,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.693:0.019,0.268,0.712	0|0:0:1,0,0
+3	15962868	SNP-3.15961514.	A	G	.	PASS	AR2=0.927;DR2=0.943;AF=0.262	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.965,0.035,0	0|0:0:1,0,0	1|1:1.782:0.014,0.191,0.796	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.228:0.126,0.519,0.355	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.331:0.224,0.221,0.555	0|0:0.652:0.462,0.424,0.114	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:1.161:0.174,0.491,0.335	0|1:0.845:0.33,0.496,0.174	0|0:0:1,0,0	1|1:1.644:0.034,0.288,0.678	0|0:0:1,0,0	1|1:1.594:0.036,0.333,0.63	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.288:0.136,0.439,0.424	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.96,0.04,0	0|0:0.353:0.653,0.341,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|1:1.483:0.039,0.439,0.522	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.583:0.03,0.357,0.613	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.656:0.032,0.281,0.688	0|0:0.953:0.269,0.509,0.222	1|1:1.721:0.029,0.22,0.751	1|1:2:0,0,1	1|1:1.582:0.048,0.323,0.63	1|1:1.044:0.239,0.478,0.283	1|1:1.462:0.086,0.366,0.548	0|1:1.047:0.236,0.482,0.283	0|0:0:1,0,0	1|1:1.782:0.01,0.198,0.792	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.651:0.033,0.284,0.684	0|0:0:1,0,0	1|1:1.719:0.021,0.239,0.74	1|1:1.639:0.033,0.296,0.671	0|0:0.598:0.485,0.432,0.083	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.997:0.272,0.46,0.268	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.249:0.126,0.5,0.375	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.998:0.215,0.571,0.214	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.7:0.023,0.254,0.723	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15963726	SNP-3.15962372.	C	A	.	PASS	AR2=1;DR2=1;AF=0.288	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15964296	SNP-3.15962942.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.277	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.857:0.001,0.141,0.858	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.735:0.009,0.247,0.744	1|1:1.817:0.003,0.177,0.82	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.905:0.001,0.093,0.906	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15964532	SNP-3.15963178.	C	A	.	PASS	AR2=1;DR2=1;AF=0.267	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15966855	SNP-3.15965501.	A	G	.	PASS	AR2=1;DR2=1;AF=0.397	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	15968302	SNP-3.15966948.	A	G	.	PASS	AR2=1;DR2=1;AF=0.315	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15968647	SNP-3.15967293.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.399	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.962:0,0.037,0.962	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.952,0.047,0.001	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.977:0,0.023,0.977	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	15968918	SNP-3.15967564.	A	G	.	PASS	AR2=0.979;DR2=0.984;AF=0.287	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.069:0.932,0.067,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.945,0.053,0.001	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.674:0.026,0.274,0.7	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.819:0.008,0.164,0.827	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.682:0.032,0.253,0.714	1|1:2:0,0,1	1|1:1.487:0.074,0.365,0.561	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.096:0.91,0.084,0.006	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.586:0.039,0.336,0.625	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.909:0.002,0.087,0.911	0|0:0.012:0.988,0.012,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.109:0.895,0.1,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.7:0.018,0.265,0.718	0|0:0:1,0,0	1|1:1.878:0.003,0.115,0.881	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.127:0.876,0.122,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.092:0.91,0.088,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.784:0.012,0.193,0.796	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.194:0.817,0.172,0.011	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.937,0.061,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.133:0.869,0.129,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15969236	SNP-3.15967882.	A	G	.	PASS	AR2=0.874;DR2=0.9;AF=0.258	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.61:0.059,0.272,0.669	0|1:1.356:0.104,0.436,0.46	1|1:2:0,0,1	1|1:1.327:0.109,0.454,0.437	0|0:0:1,0,0	0|1:1.231:0.143,0.483,0.374	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1.082:0.219,0.481,0.301	0|1:1:0,1,0	1|1:1.278:0.131,0.46,0.409	1|1:1.119:0.197,0.488,0.316	0|1:1.296:0.125,0.455,0.421	0|1:1.222:0.151,0.477,0.372	1|0:1.3:0.123,0.454,0.423	1|0:1:0,1,0	1|1:1.083:0.234,0.449,0.317	1|1:1.22:0.147,0.486,0.367	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.189:0.181,0.449,0.37	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.478:0.074,0.374,0.552	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.214:0.157,0.472,0.371	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.115:0.197,0.49,0.312	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.215:0.163,0.46,0.377	1|0:1:0,1,0	1|1:1.144:0.187,0.483,0.33	1|1:1.324:0.118,0.439,0.442	1|0:1.251:0.139,0.471,0.39	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.218:0.152,0.477,0.371	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.223:0.15,0.476,0.373	1|0:1.253:0.138,0.47,0.392	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.189:0.166,0.479,0.355	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.344:0.109,0.439,0.453	0|0:0:1,0,0	1|1:1.415:0.088,0.41,0.502	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.45:0.082,0.386,0.532	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.382:0.128,0.362,0.51	0|1:1.21:0.153,0.484,0.363	1|0:1.234:0.145,0.475,0.38	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.092:0.207,0.494,0.299	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.338:0.114,0.434,0.452	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.215:0.159,0.468,0.374	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15970345	SNP-3.15968991.	C	A	.	PASS	AR2=0.991;DR2=0.992;AF=0.283	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.73:0.015,0.241,0.744	1|1:1.644:0.027,0.301,0.672	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.823:0.007,0.163,0.83	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.838:0.006,0.15,0.844	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.848:0.005,0.142,0.853	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.838:0.006,0.15,0.844	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.987:0,0.012,0.988	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.943:0.001,0.056,0.943	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.007,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.695:0.023,0.259,0.718	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.961,0.039,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.977:0,0.023,0.977	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15970854	SNP-3.15969500.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.376	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.11:0.894,0.102,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.075:0.926,0.073,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.943:0.004,0.049,0.947	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	15971326	SNP-3.15969972.	A	G	.	PASS	AR2=0.992;DR2=0.993;AF=0.224	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.035,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.839:0.008,0.145,0.847	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.05:0.95,0.049,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.214:0.789,0.207,0.003	0|0:0:1,0,0	0|0:0.045:0.956,0.044,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.932,0.066,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.215:0.79,0.206,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.872:0.005,0.117,0.878	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.867:0.005,0.123,0.872	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.903:0.003,0.091,0.906	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.94:0.002,0.056,0.942	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15972105	SNP-3.15970751.	A	G	.	PASS	AR2=0.973;DR2=0.979;AF=0.377	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.933,0.066,0.001	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.318:0.706,0.269,0.025	0|0:0.24:0.769,0.222,0.009	0|0:0.228:0.78,0.211,0.008	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.232:0.779,0.21,0.011	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.137:0.868,0.126,0.006	0|0:0.252:0.766,0.216,0.018	0|0:0.25:0.765,0.22,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.719:0.35,0.582,0.069	0|0:0.218:0.797,0.189,0.014	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.129:0.875,0.122,0.003	1|1:2:0,0,1	0|0:0.257:0.754,0.235,0.011	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.05,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.153:0.851,0.145,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.25:0.771,0.208,0.021	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.131:0.872,0.125,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.185:0.82,0.175,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.057:0.944,0.054,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.181:0.831,0.158,0.011	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.529:0.503,0.465,0.032	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.112:0.892,0.103,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.224:0.789,0.197,0.013	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.969,0.031,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.434:0.65,0.266,0.084	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.138:0.867,0.128,0.005	0|0:0:1,0,0	0|0:0.216:0.798,0.189,0.013	0|0:0.047:0.954,0.046,0.001	0|0:0:1,0,0	0|0:0.045:0.955,0.044,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.111:0.89,0.108,0.002	1|1:2:0,0,1
+3	15974601	SNP-3.15973247.	C	A	.	PASS	AR2=0.98;DR2=0.983;AF=0.251	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.336:0.014,0.636,0.35	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.939,0.06,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.89:0.005,0.1,0.895	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.247:0.066,0.621,0.313	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.817:0.008,0.167,0.825	1|1:2:0,0,1	1|1:1.267:0.058,0.616,0.325	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.887:0.005,0.104,0.892	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.06:0.165,0.611,0.224	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.919:0.002,0.078,0.92	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.379:0.018,0.584,0.398	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.909:0.002,0.087,0.911	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.886:0.005,0.104,0.891	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.906:0.004,0.085,0.91	1|1:2:0,0,1	1|1:1.717:0.019,0.245,0.736	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.899:0.004,0.092,0.903	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.891:0.004,0.101,0.895	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.897:0.002,0.1,0.898	0|0:0:1,0,0
+3	15976989	SNP-3.15975635.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.225	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.974:0,0.025,0.974	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.932:0,0.068,0.932	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15977444	SNP-3.15976090.	A	G	.	PASS	AR2=1;DR2=1;AF=0.383	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	15978213	SNP-3.15976859.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.265	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.036,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.954,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15979612	SNP-3.15978258.	A	G	.	PASS	AR2=1;DR2=1;AF=0.383	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	15979735	SNP-3.15978381.	A	G	.	PASS	AR2=0.995;DR2=0.996;AF=0.344	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.933:0.001,0.064,0.935	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.931:0.002,0.066,0.932	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.92:0.002,0.076,0.922	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.926:0.001,0.071,0.927	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.908:0.002,0.087,0.91	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.496:0.063,0.377,0.559	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.903:0.003,0.091,0.906	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	15980358	SNP-3.15979004.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.318	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.925:0.001,0.073,0.926	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.962:0,0.037,0.962	1|1:2:0,0,1	1|1:1.984:0,0.016,0.984	1|1:1.954:0.001,0.045,0.955	0|0:0:1,0,0	1|1:1.943:0.002,0.054,0.944	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.026,0.973	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.916:0.001,0.082,0.917	1|1:1.928:0.001,0.07,0.929	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.96:0.001,0.039,0.96	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.957:0,0.043,0.957	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	15981578	SNP-3.15980224.	C	A	.	PASS	AR2=0.995;DR2=0.996;AF=0.258	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.985:0,0.015,0.985	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.933:0,0.066,0.934	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.081:0.922,0.076,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.044:0.956,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.962,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.943,0.057,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.8:0.01,0.181,0.81	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.891:0.003,0.104,0.894	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.966:0,0.033,0.966	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.837:0.002,0.159,0.839	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.965,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.947,0.052,0.001	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15983192	SNP-3.15981838.	C	A	.	PASS	AR2=0.936;DR2=0.951;AF=0.367	GT:DS:GP	0|0:0.461:0.584,0.37,0.045	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.317:0.709,0.266,0.025	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.202:0.806,0.186,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.126:0.879,0.117,0.004	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.097:0.906,0.091,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.296:0.727,0.25,0.023	0|0:0:1,0,0	0|0:0.272:0.747,0.235,0.018	0|0:0:1,0,0	0|0:0.309:0.715,0.261,0.024	1|1:2:0,0,1	0|0:0.27:0.752,0.226,0.022	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.347:0.678,0.297,0.025	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.234:0.778,0.209,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.288:0.733,0.246,0.021	0|0:0.276:0.743,0.238,0.019	0|0:0.291:0.731,0.248,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.359:0.674,0.293,0.033	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.286:0.732,0.25,0.018	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.275:0.744,0.238,0.018	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.289:0.732,0.247,0.021	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.556:0.504,0.436,0.06	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.315:0.71,0.265,0.025	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0.295:0.727,0.252,0.022	1|1:2:0,0,1	0|0:0.296:0.726,0.251,0.023	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.102:0.902,0.093,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.313:0.711,0.265,0.024	0|0:0:1,0,0	0|0:0.296:0.726,0.251,0.022	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.471:0.575,0.38,0.046	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.164:0.841,0.154,0.005	0|0:0.313:0.705,0.278,0.018	0|0:0:1,0,0	0|0:0.092:0.91,0.089,0.002	0|0:0:1,0,0	0|0:0.213:0.793,0.2,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.296:0.726,0.252,0.022	1|1:2:0,0,1	0|0:0.29:0.731,0.248,0.021	0|0:0:1,0,0	0|0:0.368:0.666,0.301,0.033	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.347:0.683,0.286,0.031	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.182:0.825,0.167,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0.202:0.81,0.178,0.012	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.3:0.724,0.253,0.023	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.31:0.715,0.261,0.024	0|0:0.292:0.73,0.249,0.022	0|0:0.289:0.732,0.246,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.296:0.727,0.251,0.022	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.448:0.613,0.326,0.061	0|0:0:1,0,0	0|0:0.317:0.709,0.266,0.025	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.296:0.727,0.251,0.023	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15985025	SNP-3.15983671.	A	G	.	PASS	AR2=0.955;DR2=0.964;AF=0.375	GT:DS:GP	1|1:1.903:0.002,0.092,0.906	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.063:0.937,0.062,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.027:0.973,0.027,0	0|0:0.262:0.756,0.227,0.017	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.897:0.21,0.684,0.107	1|0:1:0,1,0	0|0:0.39:0.646,0.318,0.036	0|0:0.373:0.662,0.304,0.034	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.391:0.649,0.312,0.04	0|0:0:1,0,0	0|0:0.303:0.722,0.253,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.283:0.738,0.24,0.021	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.899:0.002,0.096,0.902	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.22:0.792,0.195,0.013	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.888:0.003,0.106,0.891	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.142:0.863,0.132,0.005	1|1:1.902:0.003,0.093,0.904	1|1:1.874:0.004,0.118,0.878	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.901:0.002,0.094,0.904	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.88:0.003,0.113,0.884	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.867:0.004,0.125,0.871	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.061:0.042,0.855,0.103	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.255:0.766,0.214,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.04:0.96,0.039,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.851:0.004,0.14,0.855	1|1:2:0,0,1	0|0:0.044:0.956,0.043,0.001	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.071:0.931,0.068,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.238:0.777,0.209,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.603:0.477,0.443,0.08	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.15:0.856,0.138,0.006	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.154:0.846,0.154,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.224:0.785,0.206,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.276:0.743,0.238,0.019	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.377:0.662,0.298,0.039	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.895:0.003,0.099,0.898	0|0:0.198:0.812,0.177,0.01	0|0:0.37:0.664,0.302,0.034	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.312:0.715,0.258,0.027	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.217:0.795,0.192,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.273:0.749,0.229,0.022	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.303:0.722,0.253,0.025	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.219:0.796,0.189,0.015	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.919:0.002,0.078,0.92	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.969,0.03,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.036:0.965,0.034,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.108:0.896,0.099,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.859:0.008,0.126,0.867	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.196:0.815,0.173,0.011	0|0:0:1,0,0	1|1:2:0,0,1
+3	15988366	SNP-3.15987012.	C	A	.	PASS	AR2=1;DR2=1;AF=0.298	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.023,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15989426	SNP-3.15988072.	C	A	.	PASS	AR2=0.992;DR2=0.992;AF=0.261	GT:DS:GP	0|0:0.026:0.974,0.026,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.031:0.97,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.964,0.036,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0.039:0.961,0.038,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.882:0,0.117,0.882	1|1:1.903:0,0.096,0.904	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.227:0.079,0.615,0.306	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.167:0.058,0.717,0.225	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.946:0.002,0.05,0.948	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.077:0.924,0.074,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.968,0.031,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.984:0,0.016,0.984	1|1:1.862:0.005,0.128,0.867	1|1:1.968:0,0.032,0.968	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15990244	SNP-3.15988890.	C	A	.	PASS	AR2=1;DR2=1;AF=0.292	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	15991434	SNP-3.15990080.	C	A	.	PASS	AR2=1;DR2=1;AF=0.292	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	15997983	SNP-3.15996629.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.255	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.916:0.003,0.078,0.919	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	15998144	SNP-3.15996790.	C	A	.	PASS	AR2=0.975;DR2=0.981;AF=0.353	GT:DS:GP	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.238:0.775,0.211,0.014	0|0:0:1,0,0	1|1:1.938:0.001,0.06,0.939	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.178:0.828,0.165,0.006	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.142:0.865,0.128,0.007	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.172:0.836,0.157,0.007	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.272:0.744,0.239,0.016	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.142:0.862,0.135,0.003	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0.267:0.758,0.218,0.024	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.802:0.009,0.181,0.81	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.866:0.004,0.125,0.87	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.87:0.004,0.123,0.873	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.374:0.656,0.314,0.03	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.522:0.543,0.392,0.065	1|1:1.968:0,0.031,0.969	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.283:0.739,0.239,0.022	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.161:0.844,0.15,0.005	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:0.312:0.717,0.254,0.029	0|0:0:1,0,0	0|0:0.36:0.665,0.311,0.024	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.195:0.816,0.173,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.164:0.846,0.144,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.106:0.896,0.103,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.913:0.001,0.085,0.914	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0
+3	16000772	SNP-3.15999418.	A	G	.	PASS	AR2=0.99;DR2=0.992;AF=0.335	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.751:0.017,0.215,0.768	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1.134:0.057,0.751,0.191	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.819:0.007,0.168,0.825	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.913:0.003,0.081,0.916	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.878:0.005,0.113,0.882	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.87:0.005,0.12,0.875	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.925:0.001,0.074,0.926	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.421:0.032,0.515,0.453	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.829:0.006,0.158,0.835	1|1:1.752:0.019,0.211,0.771	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16001391	SNP-3.16000037.	A	G	.	PASS	AR2=0.983;DR2=0.985;AF=0.338	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.829:0.008,0.154,0.838	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.153:0.847,0.153,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.112:0.894,0.1,0.006	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.779:0.013,0.194,0.792	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	1|1:1.858:0.004,0.134,0.862	1|1:2:0,0,1	1|1:1.694:0.027,0.252,0.721	1|1:1.902:0.001,0.095,0.903	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.88:0.003,0.114,0.883	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.125:0.877,0.121,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.154:0.853,0.14,0.007	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.127:0.879,0.116,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.118:0.887,0.109,0.004	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.1:0.903,0.095,0.003	0|1:1.016:0.06,0.864,0.076	0|0:0.2:0.809,0.181,0.01	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.166:0.84,0.153,0.006	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.961:0,0.038,0.961	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.739:0.017,0.227,0.756	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.963,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.159:0.85,0.142,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.871:0.005,0.12,0.876	1|1:2:0,0,1	1|1:1.831:0.005,0.158,0.836	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16001554	SNP-3.16000200.	A	G	.	PASS	AR2=0.996;DR2=0.997;AF=0.389	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.027,0.973	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.104:0.896,0.104,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.109:0.894,0.103,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.994:0.018,0.97,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.93,0.068,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.691:0.002,0.306,0.692	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.85:0.001,0.149,0.85	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	0|0:0:1,0,0
+3	16012630	SNP-3.16011276.	A	G	.	PASS	AR2=0.981;DR2=0.985;AF=0.349	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.939:0.001,0.059,0.94	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.896:0.002,0.099,0.899	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.69:0.031,0.249,0.721	1|1:1.983:0,0.017,0.983	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.949:0.001,0.049,0.95	1|1:2:0,0,1	1|1:1.75:0.022,0.205,0.773	1|1:1.98:0,0.02,0.98	1|1:1.948:0.001,0.051,0.949	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.949:0.001,0.049,0.95	1|1:2:0,0,1	1|1:1.775:0.006,0.213,0.781	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	1|1:1.846:0.003,0.149,0.848	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.685:0.026,0.264,0.71	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.935:0,0.065,0.935	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.98:0,0.02,0.98	1|0:1.383:0.079,0.459,0.462	1|1:1.957:0,0.042,0.957	1|1:2:0,0,1	1|1:1.984:0,0.016,0.984	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.874:0.008,0.11,0.882	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.966:0,0.033,0.966	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.972:0,0.028,0.972	0|0:0:1,0,0	1|1:1.979:0,0.02,0.979	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.943:0.001,0.055,0.944	1|0:1.111:0.027,0.836,0.138	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.969:0,0.031,0.969	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.905:0.002,0.091,0.907	1|1:1.793:0.013,0.181,0.806	1|1:1.761:0.012,0.214,0.773	0|0:0:1,0,0	1|1:1.955:0.001,0.044,0.955	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.979:0,0.021,0.979	1|1:2:0,0,1	1|1:1.716:0.021,0.243,0.737	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.979:0,0.02,0.979	1|1:1.977:0,0.023,0.977	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.943:0.001,0.056,0.943	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.816:0.015,0.154,0.831	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.984:0,0.015,0.984	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16012660	SNP-3.16011306.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.269	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.032,0	0|0:0:1,0,0	0|0:0.045:0.956,0.043,0.001	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16019024	SNP-3.16017670.	A	G	.	PASS	AR2=0.98;DR2=0.982;AF=0.37	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.966,0.034,0	0|0:0:1,0,0	1|1:1.958:0.001,0.04,0.959	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.945,0.055,0	1|1:2:0,0,1	1|1:1.875:0.005,0.114,0.88	1|1:1.877:0.003,0.118,0.879	1|1:1.87:0.004,0.121,0.875	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.905:0.003,0.09,0.907	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.84:0.004,0.151,0.845	1|1:1.855:0.004,0.138,0.858	1|1:1.951:0,0.049,0.951	1|1:1.819:0.007,0.168,0.825	1|1:2:0,0,1	1|1:1.859:0.004,0.132,0.863	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.917:0.002,0.079,0.919	1|1:2:0,0,1	1|1:1.95:0.001,0.049,0.951	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.092:0.909,0.091,0.001	0|0:0.027:0.973,0.027,0	1|1:2:0,0,1	0|0:0.08:0.921,0.078,0.001	1|1:1.994:0,0.006,0.994	0|0:0.058:0.943,0.057,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.998:0.019,0.964,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.842:0.006,0.147,0.848	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.96:0.001,0.039,0.96	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.865:0.004,0.127,0.869	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.029:0.04,0.892,0.068	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.183:0.006,0.805,0.189	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.03:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.958,0.042,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.917:0.002,0.079,0.919	1|1:2:0,0,1	1|1:1.903:0.006,0.086,0.909	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.782:0.011,0.196,0.793	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.789:0.01,0.19,0.799	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.875:0.005,0.115,0.88	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.918:0.003,0.076,0.921	1|1:1.812:0.005,0.178,0.817	0|0:0:1,0,0	1|1:1.949:0,0.051,0.949	1|1:1.902:0.002,0.094,0.904	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.034:0.966,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.984:0,0.016,0.984	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.818:0.007,0.169,0.824	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.743:0.018,0.22,0.761	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.769:0.008,0.215,0.777	0|0:0:1,0,0	0|0:0.04:0.961,0.039,0.001	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16019413	SNP-3.16018059.	C	A	.	PASS	AR2=0.988;DR2=0.989;AF=0.322	GT:DS:GP	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.021:0.979,0.021,0	0|0:0.012:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.197:0.813,0.176,0.01	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.11:0.894,0.103,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.112:0.891,0.107,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.114:0.889,0.108,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.192:0.816,0.176,0.008	0|0:0.075:0.926,0.072,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.094:0.908,0.09,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.135:0.869,0.127,0.004	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.064:0.937,0.063,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.965,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.116:0.888,0.108,0.004	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.181:0.827,0.165,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.221:0.789,0.2,0.01	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.044:0.956,0.043,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.942,0.058,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.167:0.838,0.157,0.005	0|0:0.1:0.905,0.091,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.145:0.862,0.131,0.007	0|0:0.179:0.829,0.162,0.009	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	16020114	SNP-3.16018760.	A	G	.	PASS	AR2=0.97;DR2=0.975;AF=0.39	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	0|0:0.244:0.776,0.204,0.02	0|0:0:1,0,0	0|0:0.153:0.853,0.141,0.006	0|0:0.22:0.791,0.197,0.011	0|0:0.309:0.716,0.26,0.024	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.177:0.829,0.165,0.006	0|0:0.242:0.773,0.212,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.17:0.837,0.157,0.007	1|0:1.016:0.084,0.816,0.1	0|0:0:1,0,0	0|0:0.156:0.85,0.143,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.156:0.851,0.142,0.007	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.153:0.853,0.14,0.006	0|0:0.184:0.824,0.168,0.008	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.194:0.815,0.176,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.914:0.228,0.629,0.142	0|0:0:1,0,0	0|0:0.13:0.874,0.122,0.004	0|0:0:1,0,0	1|0:1.031:0.17,0.629,0.201	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.949,0.051,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.202:0.808,0.182,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.961:0.002,0.036,0.962	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.153:0.855,0.137,0.008	0|0:0.244:0.772,0.212,0.016	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.153:0.855,0.138,0.007	0|0:0:1,0,0	0|0:0.217:0.794,0.196,0.011	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.177:0.832,0.16,0.009	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.459:0.635,0.27,0.094	0|0:0.192:0.816,0.177,0.008	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.351:0.68,0.288,0.031	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.289:0.735,0.242,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.17:0.842,0.146,0.012	0|0:0.301:0.729,0.242,0.029	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16021654	SNP-3.16020300.	A	G	.	PASS	AR2=0.972;DR2=0.977;AF=0.289	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.714:0.018,0.25,0.732	1|1:2:0,0,1	1|1:1.722:0.02,0.237,0.743	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.831:0.01,0.149,0.841	1|0:1.512:0.06,0.368,0.572	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.202:0.174,0.45,0.376	1|1:1.736:0.019,0.227,0.755	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.836:0.006,0.152,0.842	1|1:1.694:0.021,0.264,0.715	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	1|1:1.912:0.002,0.085,0.914	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.636:0.026,0.312,0.662	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.605:0.415,0.565,0.02	0|0:0:1,0,0	1|1:1.86:0.005,0.131,0.865	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.969,0.031,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.735:0.018,0.228,0.754	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.882:0.004,0.11,0.886	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.718:0.02,0.243,0.737	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.726:0.018,0.238,0.744	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.675:0.032,0.261,0.707	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.907:0.002,0.089,0.909	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.814:0.008,0.17,0.822	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.853:0.008,0.131,0.861	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16022203	SNP-3.16020849.	A	G	.	PASS	AR2=0.977;DR2=0.979;AF=0.308	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.969,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.86:0.005,0.13,0.865	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.863:0.005,0.127,0.868	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.819:0.008,0.165,0.827	1|1:2:0,0,1	0|1:0.939:0.071,0.919,0.01	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.828:0.008,0.157,0.836	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.854:0.005,0.136,0.859	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.845:0.006,0.142,0.851	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.904:0.004,0.089,0.908	1|1:1.836:0.007,0.15,0.843	0|0:0.012:0.988,0.012,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.026,0	0|0:0:1,0,0	1|1:1.869:0.005,0.122,0.874	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.9:0.004,0.093,0.904	0|0:0:1,0,0	1|1:1.848:0.006,0.141,0.853	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.732:0.269,0.73,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.761:0.239,0.761,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.853:0.005,0.136,0.859	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.848:0.006,0.14,0.854	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.847:0.006,0.141,0.853	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.84:0.007,0.146,0.847	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.835:0.006,0.153,0.841	1|1:1.817:0.009,0.165,0.826	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.913:0.003,0.08,0.917	1|1:1.855:0.005,0.134,0.86	1|1:1.874:0.005,0.116,0.879	1|1:2:0,0,1	1|1:1.871:0.005,0.119,0.876	1|1:2:0,0,1	1|1:1.877:0.004,0.115,0.881	1|1:1.872:0.005,0.118,0.877	1|1:2:0,0,1	1|1:1.838:0.007,0.148,0.845	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.768:0.016,0.2,0.784	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0.043:0.958,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.811:0.008,0.173,0.819	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.851:0.006,0.138,0.856
+3	16023464	SNP-3.16022110.	C	A	.	PASS	AR2=0.9;DR2=0.926;AF=0.382	GT:DS:GP	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.736:0.009,0.247,0.745	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.368:0.665,0.301,0.033	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.012:0.264,0.46,0.276	0|0:0.344:0.686,0.284,0.03	0|0:0.239:0.78,0.201,0.019	0|0:0:1,0,0	0|0:0.295:0.728,0.249,0.023	0|0:0.3:0.71,0.281,0.009	0|0:0:1,0,0	0|0:0.218:0.803,0.176,0.021	0|0:0:1,0,0	0|0:0.415:0.623,0.338,0.039	1|1:2:0,0,1	0|0:0.32:0.706,0.268,0.026	0|0:0.282:0.741,0.237,0.022	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.411:0.631,0.328,0.041	0|0:0.386:0.644,0.326,0.03	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.307:0.714,0.265,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.309:0.718,0.256,0.026	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.752:0.017,0.214,0.769	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.69:0.027,0.256,0.717	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.246:0.769,0.216,0.015	1|1:2:0,0,1	1|1:1.793:0.012,0.183,0.805	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.578:0.502,0.418,0.08	1|1:1.852:0.008,0.133,0.86	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.589:0.029,0.352,0.619	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.64:0.026,0.308,0.666	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.826:0.012,0.151,0.838	0|0:0:1,0,0	0|1:0.952:0.177,0.693,0.13	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.289:0.73,0.251,0.019	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.654:0.031,0.283,0.686	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.817:0.011,0.162,0.828	1|1:2:0,0,1	1|1:1.472:0.073,0.383,0.544	1|1:1.869:0.008,0.115,0.877	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.359:0.674,0.292,0.033	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.528:0.063,0.345,0.592	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.542:0.525,0.408,0.067	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.232:0.787,0.194,0.019	0|0:0:1,0,0	0|0:0.301:0.724,0.252,0.025	0|0:0:1,0,0	0|0:0.219:0.794,0.192,0.013	0|0:0:1,0,0	1|1:1.427:0.097,0.379,0.524	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.045:0.956,0.043,0.001	0|0:0.272:0.748,0.232,0.02	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.416:0.625,0.335,0.041	0|0:0:1,0,0	0|0:0.365:0.667,0.301,0.032	0|0:0:1,0,0	0|1:0.813:0.313,0.561,0.126	1|0:0.625:0.483,0.41,0.107	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.439:0.085,0.391,0.524	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.863:0.009,0.12,0.871	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.357:0.673,0.297,0.03	0|0:0.477:0.576,0.372,0.053	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.226:0.79,0.195,0.015	0|0:0.045:0.956,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.208:0.802,0.187,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.443:0.602,0.353,0.045	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.409:0.109,0.372,0.518	0|0:0.294:0.721,0.265,0.014	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.725:0.02,0.235,0.745	1|1:2:0,0,1	1|1:1.873:0.008,0.11,0.881	1|1:1.271:0.268,0.193,0.539	0|0:0:1,0,0	1|1:1.674:0.031,0.264,0.705	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.767:0.014,0.204,0.781	0|0:0:1,0,0	0|0:0.4:0.648,0.304,0.048	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.737:0.016,0.232,0.753	0|0:0:1,0,0
+3	16026232	SNP-3.16024878.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.389	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0,0.024,0.976	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.965:0,0.034,0.966	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.261:0.001,0.737,0.262	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16030064	SNP-3.16028710.	A	G	.	PASS	AR2=0.98;DR2=0.984;AF=0.394	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.14:0.864,0.132,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.947:0.001,0.052,0.948	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.172:0.839,0.15,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.347:0.681,0.292,0.027	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.546:0.507,0.44,0.053	0|0:0:1,0,0	0|0:0.218:0.795,0.192,0.013	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.231:0.781,0.208,0.012	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.862:0.007,0.124,0.869	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.936:0.001,0.061,0.937	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.957,0.043,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.942,0.056,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.287:0.736,0.241,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.171:0.838,0.154,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.208:0.802,0.188,0.01	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.31:0.713,0.264,0.023	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.174:0.837,0.151,0.011	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.212:0.801,0.187,0.013	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.204:0.807,0.183,0.011	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.189:0.82,0.17,0.01	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.209:0.803,0.185,0.012	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16031042	SNP-3.16029688.	A	G	.	PASS	AR2=0.998;DR2=0.999;AF=0.32	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.966:0,0.034,0.966	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.973:0,0.027,0.973	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.729:0.272,0.727,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16031456	SNP-3.16030102.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.321	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	0|1:1.016:0,0.984,0.016	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.861:0,0.139,0.861	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.969:0,0.031,0.969	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16034617	SNP-3.16033263.	A	G	.	PASS	AR2=0.991;DR2=0.991;AF=0.343	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.948,0.051,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.819:0.016,0.15,0.834	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.076:0.926,0.071,0.003	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.052:0.948,0.051,0.001	0|1:1:0,1,0	0|0:0.052:0.949,0.05,0.001	1|1:2:0,0,1	0|0:0.041:0.959,0.041,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.049:0.951,0.048,0.001	0|0:0.041:0.959,0.041,0	0|0:0.07:0.931,0.068,0.001	0|0:0.05:0.951,0.049,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.914:0.002,0.082,0.916	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.907:0.003,0.088,0.909	0|0:0.082:0.92,0.077,0.002	0|0:0:1,0,0	1|1:1.925:0.002,0.072,0.926	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0	0|0:0.059:0.941,0.058,0.001	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.036:0.964,0.035,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.037:0.963,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.93:0.001,0.067,0.931	0|0:0:1,0,0	1|1:1.953:0,0.046,0.953	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.901:0.003,0.094,0.904	1|1:1.959:0.001,0.04,0.959	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.923:0.002,0.073,0.925	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.049:0.952,0.048,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.913:0.002,0.083,0.915	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.941,0.058,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.057:0.944,0.055,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.928:0.002,0.069,0.93	0|0:0.086:0.914,0.086,0	0|0:0:1,0,0
+3	16035032	SNP-3.16033678.	A	G	.	PASS	AR2=0.902;DR2=0.929;AF=0.372	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.144:0.86,0.136,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.197:0.813,0.177,0.01	0|0:0:1,0,0	0|0:0.311:0.714,0.261,0.025	1|1:1.544:0.066,0.323,0.61	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.376:0.101,0.423,0.477	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.504:0.061,0.374,0.565	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.395:0.085,0.436,0.48	1|1:1.772:0.017,0.195,0.788	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.433:0.084,0.399,0.517	0|0:0:1,0,0	1|1:1.509:0.059,0.373,0.568	1|1:1.64:0.029,0.303,0.668	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.249:0.763,0.224,0.012	0|0:0:1,0,0	0|0:0.152:0.854,0.14,0.006	1|1:1.54:0.052,0.355,0.593	0|0:0:1,0,0	1|1:1.787:0.016,0.18,0.803	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.398:0.641,0.32,0.039	0|0:0.185:0.822,0.17,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.107:0.897,0.1,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.594:0.024,0.359,0.617	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.512:0.058,0.371,0.571	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.237:0.775,0.213,0.012	1|0:1.364:0.11,0.416,0.474	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.362:0.653,0.332,0.015	1|1:1.411:0.085,0.419,0.496	0|0:0.337:0.693,0.277,0.03	0|0:0.16:0.849,0.141,0.009	0|0:0.336:0.694,0.275,0.031	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.164:0.843,0.149,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.138:0.869,0.125,0.006	0|0:0:1,0,0	0|0:0.189:0.818,0.175,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.943,0.056,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.314:0.712,0.262,0.026	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.084:0.919,0.077,0.004	0|0:0.304:0.715,0.265,0.019	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.288:0.734,0.244,0.022	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.96,0.039,0.001	0|0:0:1,0,0	1|1:1.575:0.047,0.331,0.622	0|0:0.142:0.865,0.128,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.126:0.881,0.112,0.007	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.12:0.885,0.111,0.005	1|0:0.281:0.728,0.264,0.009	0|0:0.253:0.765,0.218,0.018	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.504:0.061,0.374,0.565	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.515:0.056,0.374,0.571	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.187:0.821,0.172,0.007	0|0:0:1,0,0	1|0:0.438:0.582,0.397,0.02	0|0:0.268:0.742,0.248,0.01	1|1:1.773:0.014,0.199,0.787	1|1:2:0,0,1	0|0:0.218:0.792,0.197,0.01	1|1:2:0,0,1	0|1:1.515:0.057,0.37,0.573	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.292:0.727,0.254,0.019	1|1:2:0,0,1	1|1:1.352:0.11,0.428,0.462	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.277:0.732,0.259,0.009	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.052:0.948,0.051,0.001	0|0:0:1,0,0	0|0:0.253:0.765,0.218,0.018	1|1:2:0,0,1	1|1:1.549:0.052,0.347,0.601	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.576:0.047,0.33,0.623	1|1:1.733:0.025,0.218,0.757	0|0:0:1,0,0	1|1:1.684:0.022,0.272,0.706	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.875:0.009,0.107,0.884	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.137:0.872,0.119,0.009	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.366:0.667,0.299,0.034	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.733:0.029,0.209,0.762	0|0:0.435:0.596,0.372,0.031	0|0:0:1,0,0
+3	16038010	SNP-3.16036656.	A	G	.	PASS	AR2=1;DR2=1;AF=0.383	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16039908	SNP-3.16038554.	C	A	.	PASS	AR2=0.998;DR2=0.999;AF=0.291	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.708:0,0.292,0.708	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.927:0,0.073,0.927	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16040124	SNP-3.16038770.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.358	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.958,0.041,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.951:0.001,0.048,0.951	1|1:2:0,0,1	1|1:1.972:0,0.028,0.972	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.959:0,0.04,0.96	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.019:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.97:0,0.029,0.971	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0
+3	16041706	SNP-3.16040352.	C	A	.	PASS	AR2=1;DR2=1;AF=0.321	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16041891	SNP-3.16040537.	A	G	.	PASS	AR2=1;DR2=1;AF=0.329	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.974,0.026,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16043518	SNP-3.16042164.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.31	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.089:0.912,0.086,0.002	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.948,0.051,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16044322	SNP-3.16042968.	A	G	.	PASS	AR2=0.995;DR2=0.996;AF=0.339	GT:DS:GP	1|1:2:0,0,1	0|0:0.026:0.974,0.026,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.053:0.947,0.052,0	0|0:0:1,0,0	0|0:0.034:0.966,0.033,0	0|0:0.106:0.897,0.1,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.008:0,0.991,0.008	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.085:0.917,0.082,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.339:0.661,0.339,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.094:0.908,0.09,0.002	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.922,0.077,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.059:0.942,0.057,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.084:0.918,0.081,0.002	1|1:2:0,0,1	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16046247	SNP-3.16044893.	A	G	.	PASS	AR2=0.992;DR2=0.993;AF=0.44	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.918:0.188,0.706,0.106	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.84:0.004,0.151,0.844	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.966:0,0.033,0.966	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.074:0.165,0.596,0.239	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.26:0.138,0.465,0.397	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.074:0.055,0.816,0.129	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.853:0.002,0.142,0.855	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.964:0,0.035,0.965	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16049910	SNP-3.16048556.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.362	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.957:0.001,0.041,0.958	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.982:0,0.017,0.983	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.031:0,0.969,0.031	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.978:0,0.022,0.978	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.944,0.056,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.026:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.016,0.984	1|1:1.985:0,0.015,0.985	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16051156	SNP-3.16049802.	A	G	.	PASS	AR2=0.982;DR2=0.989;AF=0.238	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.923:0.001,0.075,0.924	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.083:0.919,0.08,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.023,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.551:0.526,0.398,0.077	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.551:0.526,0.398,0.077	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.062:0.939,0.06,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.048:0.953,0.046,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.551:0.526,0.398,0.077	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.911:0.003,0.083,0.914	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.551:0.526,0.398,0.077	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16052453	SNP-3.16051099.	A	G	.	PASS	AR2=0.998;DR2=0.999;AF=0.347	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.982:0,0.017,0.983	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0,0.024,0.975	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.71:0.004,0.283,0.714	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0,0.024,0.976	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0,0.021,0.978	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16052936	SNP-3.16051582.	A	G	.	PASS	AR2=0.994;DR2=0.996;AF=0.234	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.916:0.002,0.08,0.918	1|1:1.966:0.001,0.033,0.966	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.904:0.003,0.09,0.907	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.912:0.002,0.084,0.914	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:0.533:0.472,0.523,0.005	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.914:0.002,0.082,0.916	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.947:0.001,0.05,0.948	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16053713	SNP-3.16052359.	A	G	.	PASS	AR2=0.984;DR2=0.987;AF=0.238	GT:DS:GP	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.972:0,0.028,0.972	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.647:0.407,0.539,0.054	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.137:0.867,0.129,0.004	0|0:0.119:0.885,0.111,0.004	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.246:0.771,0.211,0.017	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.154:0.852,0.143,0.006	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.051:0.95,0.049,0.001	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.074:0.006,0.914,0.08	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0.15:0.856,0.139,0.005	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1.318:0.024,0.634,0.342	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0.321:0.681,0.317,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.239:0.762,0.238,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.104:0.899,0.098,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16054009	SNP-3.16052655.	A	G	.	PASS	AR2=0.993;DR2=0.995;AF=0.337	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.023:0.977,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.221:0.79,0.2,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.149:0.854,0.142,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.278:0.737,0.247,0.016	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.319:0.701,0.278,0.021	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.273:0.734,0.259,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16056312	SNP-3.16054958.	C	A	.	PASS	AR2=1;DR2=1;AF=0.294	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16057891	SNP-3.16056537.	A	G	.	PASS	AR2=1;DR2=1;AF=0.323	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16058615	SNP-3.16057261.	A	G	.	PASS	AR2=1;DR2=1;AF=0.327	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16059332	SNP-3.16057978.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.3	GT:DS:GP	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.942,0.057,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.084:0.918,0.08,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16059864	SNP-3.16058510.	A	G	.	PASS	AR2=1;DR2=1;AF=0.325	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16070188	SNP-3.16068834.	A	G	.	PASS	AR2=0.998;DR2=0.999;AF=0.231	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.756:0.001,0.242,0.757	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.027,0.973	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16072044	SNP-3.16070690.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.293	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.95,0.049,0.001	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.966:0,0.033,0.966	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.925:0.001,0.074,0.926	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.954,0.045,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.047:0.954,0.046,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.957,0.042,0.001	0|1:1:0,1,0	0|0:0.041:0.959,0.04,0.001	0|0:0:1,0,0	0|0:0.04:0.961,0.039,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.228:0.777,0.217,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16074898	SNP-3.16073544.	A	G	.	PASS	AR2=0.997;DR2=0.997;AF=0.304	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.653:0.017,0.314,0.669	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.828:0.009,0.154,0.837	1|1:1.885:0.006,0.103,0.891	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16075626	SNP-3.16074272.	C	A	.	PASS	AR2=0.995;DR2=0.996;AF=0.243	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.926:0.255,0.564,0.181	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1.124:0.094,0.687,0.218	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.924:0.001,0.074,0.925	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16075691	SNP-3.16074337.	A	G	.	PASS	AR2=0.989;DR2=0.992;AF=0.221	GT:DS:GP	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.055:0.946,0.054,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.028:0.972,0.028,0	0|1:0.59:0.468,0.474,0.058	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.16:0.84,0.16,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.957,0.043,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.487:0.029,0.455,0.516	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.164:0.106,0.625,0.27	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.039:0.961,0.038,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16076230	SNP-3.16074876.	A	G	.	PASS	AR2=1;DR2=1;AF=0.325	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16076306	SNP-3.16074952.	C	A	.	PASS	AR2=0.99;DR2=0.993;AF=0.306	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0.121:0.881,0.117,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.681:0.34,0.639,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.957,0.042,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0.032:0.968,0.032,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.015,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.951,0.049,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.381:0.619,0.381,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.013:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.041:0.959,0.04,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.558:0.469,0.504,0.027	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0.081:0.92,0.078,0.001	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.24:0.76,0.239,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16078859	SNP-3.16077505.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.318	GT:DS:GP	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.923:0.002,0.074,0.925	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.933:0.001,0.065,0.934	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.979:0.021,0.979,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.916:0.002,0.08,0.918	1|1:1.972:0,0.028,0.972	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.959:0,0.04,0.959	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.991:0.009,0.991,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	1|1:1.935:0.001,0.062,0.937	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16080275	SNP-3.16078921.	A	G	.	PASS	AR2=0.97;DR2=0.978;AF=0.21	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.965,0.034,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.195:0.814,0.176,0.009	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|1:1.032:0.2,0.568,0.232	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.936:0,0.064,0.936	0|0:0.076:0.928,0.069,0.004	0|0:0:1,0,0	0|1:1.501:0.046,0.408,0.546	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.054:0.95,0.047,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.12:0.88,0.12,0	0|0:0.018:0.982,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.959,0.04,0.001	0|0:0.039:0.961,0.038,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.142:0.865,0.129,0.006	0|0:0.032:0.968,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.932,0.067,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.969,0.03,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.939,0.061,0	0|0:0:1,0,0	0|0:0.131:0.878,0.112,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.959,0.041,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.956,0.044,0	0|0:0.138:0.886,0.09,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.045:0.956,0.043,0.001	0|0:0.124:0.877,0.122,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.961,0.039,0.001	0|0:0.083:0.918,0.081,0.001	0|0:0.281:0.736,0.248,0.016	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.078:0.308,0.306,0.386	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.014:0.986,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.952,0.048,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.071:0.929,0.07,0.001	0|0:0:1,0,0	0|0:0.102:0.902,0.094,0.004	0|0:0.138:0.869,0.125,0.006	0|0:0:1,0,0
+3	16081791	SNP-3.16080437.	C	A	.	PASS	AR2=0.98;DR2=0.981;AF=0.397	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:0.791:0.369,0.471,0.16	1|0:1:0,1,0	1|0:1:0,1,0	1|1:0.98:0.26,0.499,0.24	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.953:0.001,0.044,0.955	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.855:0.368,0.409,0.223	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:0.881:0.315,0.488,0.196	1|0:1:0,1,0	1|0:1:0,1,0	1|0:0.779:0.377,0.467,0.156	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.98:0.26,0.499,0.24	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.983:0.272,0.473,0.255	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16081893	SNP-3.16080539.	C	A	.	PASS	AR2=0.987;DR2=0.989;AF=0.251	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.902:0.003,0.092,0.905	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.863:0.007,0.124,0.869	1|1:2:0,0,1	0|0:0.436:0.564,0.435,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.829:0.01,0.151,0.839	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.964:0,0.035,0.965	1|1:1.795:0.01,0.185,0.805	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.975:0,0.025,0.975	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.899:0.104,0.893,0.003	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.977:0.068,0.886,0.046	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.924:0.004,0.068,0.928	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.859:0.007,0.126,0.867	1|1:2:0,0,1	1|1:1.972:0,0.027,0.972	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.776:0.003,0.217,0.78	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.124:0.055,0.765,0.179	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.982:0,0.017,0.982	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.926:0.002,0.07,0.928	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.797:0.002,0.199,0.799	0|0:0:1,0,0
+3	16082458	SNP-3.16081104.	A	G	.	PASS	AR2=1;DR2=1;AF=0.319	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16084305	SNP-3.16082951.	C	A	.	PASS	AR2=0.907;DR2=0.923;AF=0.406	GT:DS:GP	0|0:0.559:0.514,0.412,0.073	0|0:0.289:0.711,0.289,0	0|0:0.317:0.706,0.271,0.023	0|0:0.216:0.793,0.197,0.009	1|1:2:0,0,1	0|1:1.076:0.213,0.499,0.289	1|1:1.812:0.009,0.171,0.82	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.073:0.237,0.453,0.31	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.019:0.982,0.018,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.824:0.363,0.45,0.187	0|1:0.417:0.583,0.417,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.019:0.982,0.018,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.159:0.131,0.578,0.29	1|1:1.155:0.146,0.553,0.301	0|0:0:1,0,0	0|0:0.225:0.786,0.204,0.011	0|0:0.236:0.774,0.216,0.01	0|0:0.223:0.789,0.199,0.012	1|1:2:0,0,1	0|0:0.017:0.983,0.017,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.209:0.799,0.192,0.009	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.273:0.74,0.247,0.013	0|0:0.227:0.781,0.211,0.008	1|0:0.952:0.29,0.469,0.241	0|0:0.052:0.948,0.051,0.001	0|1:1.098:0.123,0.656,0.221	0|0:0.551:0.528,0.393,0.079	0|0:0.297:0.732,0.24,0.028	0|0:0:1,0,0	0|1:0.882:0.318,0.482,0.2	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.043:0.225,0.506,0.268	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.064:0.209,0.519,0.272	0|1:0.546:0.546,0.361,0.092	1|0:0.759:0.377,0.487,0.136	0|0:0.062:0.94,0.058,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.944:0.169,0.718,0.113	0|0:0:1,0,0	0|1:1.022:0.248,0.483,0.269	1|0:0.584:0.504,0.409,0.087	0|0:0.073:0.927,0.072,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.668:0.027,0.278,0.695	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.965:0.001,0.033,0.966	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0.001,0.997,0.001	0|0:0:1,0,0	0|0:0.244:0.76,0.236,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.7:0.3,0.7,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.724:0.016,0.245,0.739	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.501:0.569,0.36,0.07	0|0:0.278:0.744,0.234,0.022	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.02:0.981,0.019,0	1|1:1.215:0.151,0.483,0.366	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.829:0.356,0.459,0.185	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.473:0.118,0.292,0.591	1|1:2:0,0,1	1|1:1.878:0.006,0.111,0.884	1|1:2:0,0,1	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.06:0.192,0.555,0.253	1|1:2:0,0,1	0|0:0.324:0.705,0.267,0.028	0|0:0:1,0,0	0|0:0.021:0.98,0.02,0	1|0:1.08:0.215,0.49,0.295	0|0:0:1,0,0	0|0:0.061:0.941,0.057,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.101:0.904,0.091,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.123:0.885,0.106,0.008	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.716:0.024,0.235,0.74	0|0:0.019:0.981,0.018,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.8:0.375,0.45,0.175	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.234:0.782,0.202,0.016	0|0:0.568:0.504,0.423,0.072	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.854:0.006,0.134,0.86	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.753:0.412,0.423,0.165	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.381:0.655,0.309,0.036	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16085089	SNP-3.16083735.	C	A	.	PASS	AR2=0.992;DR2=0.994;AF=0.398	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.154:0.85,0.145,0.005	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.301:0.729,0.241,0.03	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.332:0.682,0.305,0.013	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.022,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.238:0.775,0.212,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.12:0.884,0.113,0.004	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.12:0.884,0.113,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.245:0.763,0.229,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.127:0.875,0.123,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16085268	SNP-3.16083914.	A	G	.	PASS	AR2=0.976;DR2=0.982;AF=0.237	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.968,0.031,0.001	0|0:0.024:0.976,0.023,0	0|0:0.106:0.895,0.105,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0.348:0.668,0.315,0.016	0|0:0:1,0,0	0|0:0.076:0.925,0.074,0.001	0|0:0.055:0.945,0.054,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.051:0.949,0.05,0.001	0|0:0.049:0.952,0.047,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.285:0.725,0.266,0.009	0|0:0.006:0.994,0.006,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.119:0.884,0.113,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.156:0.849,0.145,0.005	0|0:0:1,0,0	0|0:0.153:0.851,0.145,0.004	0|0:0.389:0.62,0.371,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.951,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.697:0.442,0.419,0.139	0|0:0.18:0.825,0.17,0.005	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.03:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.218:0.795,0.193,0.012	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.064:0.939,0.058,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.153:0.857,0.133,0.01	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|0:0.641:0.383,0.594,0.023	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.058:0.944,0.055,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.026:0.975,0.025,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16085337	SNP-3.16083983.	A	G	.	PASS	AR2=0.981;DR2=0.986;AF=0.331	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.936:0.001,0.061,0.937	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.575:0.532,0.361,0.107	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.596:0.498,0.407,0.095	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.949:0,0.05,0.95	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.57:0.468,0.494,0.038	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.181:0.829,0.161,0.01	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.22:0.792,0.196,0.012	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.951,0.048,0.001	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.09:0.913,0.083,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.15:0.856,0.138,0.006	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.104:0.898,0.099,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.104:0.898,0.099,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.222:0.794,0.189,0.017	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.087:0.915,0.083,0.002	0|0:0:1,0,0	0|0:0.207:0.806,0.182,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.104:0.898,0.099,0.003	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16086121	SNP-3.16084767.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.484	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.872:0.005,0.118,0.877	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.894:0.005,0.096,0.899	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.841:0.006,0.146,0.847	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1
+3	16087398	SNP-3.16086044.	A	G	.	PASS	AR2=0.964;DR2=0.97;AF=0.287	GT:DS:GP	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.778:0.011,0.2,0.789	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.151:0.854,0.142,0.004	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.94,0.059,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.216:0.784,0.216,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.712:0.024,0.24,0.736	0|0:0:1,0,0	1|1:1.773:0.019,0.188,0.792	0|0:0:1,0,0	1|1:1.858:0.003,0.136,0.861	1|1:2:0,0,1	1|1:1.822:0.007,0.163,0.83	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.463:0.553,0.43,0.016	1|1:2:0,0,1	1|1:1.687:0.014,0.285,0.701	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.664:0.041,0.254,0.705	0|0:0:1,0,0	1|1:1.975:0,0.025,0.975	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.176:0.83,0.163,0.007	0|0:0:1,0,0	0|0:0.141:0.865,0.129,0.006	1|1:2:0,0,1	1|1:1.801:0.009,0.181,0.81	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.912:0,0.088,0.912	1|1:1.838:0.008,0.146,0.846	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.836:0.002,0.159,0.838	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.956,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.831:0.005,0.16,0.836	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.137:0.868,0.127,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.079:0.922,0.076,0.002	0|0:0.145:0.862,0.132,0.006	1|1:1.959:0,0.04,0.96	0|0:0.157:0.85,0.143,0.007	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.11:0.894,0.102,0.004	0|0:0.143:0.864,0.13,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.694:0.025,0.257,0.719	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.157:0.85,0.143,0.007	0|0:0.066:0.935,0.064,0.001	1|1:1.758:0.015,0.212,0.773	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.144:0.859,0.138,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.209:0.803,0.186,0.012	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.926:0.002,0.07,0.928	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.83:0.005,0.159,0.835	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0.169:0.838,0.155,0.007	0|0:0.115:0.889,0.106,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:1.966:0,0.033,0.967	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.771:0.015,0.198,0.786	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.076:0.926,0.072,0.002	0|0:0.175:0.826,0.173,0.001	1|1:2:0,0,1
+3	16088494	SNP-3.16087140.	A	G	.	PASS	AR2=0.995;DR2=0.995;AF=0.313	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:0.953:0.27,0.507,0.223	1|0:1:0,1,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:0.85:0.339,0.471,0.189	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1
+3	16092466	SNP-3.16091112.	A	G	.	PASS	AR2=0.908;DR2=0.935;AF=0.218	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.305:0.719,0.256,0.024	0|0:0.122:0.887,0.104,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.467:0.07,0.393,0.537	1|1:1.431:0.081,0.407,0.512	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.157:0.844,0.154,0.002	1|1:2:0,0,1	0|0:0.103:0.905,0.086,0.009	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.431:0.081,0.407,0.512	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.275:0.739,0.248,0.014	1|0:1.431:0.081,0.407,0.512	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.275:0.747,0.231,0.022	0|0:0:1,0,0	0|0:0.255:0.755,0.235,0.01	0|0:0.191:0.818,0.174,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.251:0.761,0.227,0.012	0|0:0.251:0.756,0.238,0.007	0|0:0:1,0,0	0|0:0.102:0.901,0.096,0.003	0|0:0.068:0.934,0.064,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.96,0.04,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.472:0.581,0.366,0.053	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.931,0.067,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.904,0.096,0	0|0:0:1,0,0	0|0:0.102:0.901,0.096,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.21:0.804,0.182,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.11:0.893,0.103,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.132:0.873,0.122,0.005	0|0:0.05:0.95,0.05,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.931,0.069,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.431:0.081,0.407,0.512	0|0:0.431:0.625,0.319,0.056	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.17:0.834,0.161,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.431:0.081,0.407,0.512	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.104:0.901,0.095,0.005	0|0:0.121:0.883,0.113,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.335:0.696,0.274,0.031	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.601:0.499,0.4,0.101	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.431:0.081,0.407,0.512	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.298:0.718,0.267,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.111:0.891,0.107,0.002	0|0:0.517:0.551,0.381,0.068	0|0:0.228:0.782,0.209,0.01	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.095:0.906,0.093,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.115:0.891,0.103,0.006	0|0:0:1,0,0	0|0:0.049:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.144:0.864,0.129,0.007	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.081:0.924,0.071,0.005	1|1:2:0,0,1	0|0:0.342:0.683,0.291,0.026	0|0:0:1,0,0	1|1:1.431:0.081,0.407,0.512	0|0:0.117:0.89,0.102,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.431:0.081,0.407,0.512	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.954,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.951,0.047,0.001	0|0:0:1,0,0	1|1:1.431:0.081,0.407,0.512	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.062:0.938,0.062,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16097968	SNP-3.16096614.	A	G	.	PASS	AR2=0.92;DR2=0.941;AF=0.362	GT:DS:GP	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.33:0.695,0.28,0.025	0|0:0.403:0.638,0.321,0.041	0|0:0.405:0.636,0.322,0.042	0|0:0:1,0,0	0|0:0.028:0.972,0.027,0	0|0:0.037:0.964,0.036,0	0|0:0.389:0.65,0.311,0.039	0|0:0.402:0.639,0.32,0.041	0|0:0:1,0,0	0|1:0.402:0.639,0.32,0.041	0|0:0.036:0.964,0.035,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0.402:0.639,0.32,0.041	0|0:0:1,0,0	0|0:0.402:0.639,0.32,0.041	0|0:0.402:0.639,0.32,0.041	0|0:0.402:0.639,0.32,0.041	0|1:0.402:0.639,0.32,0.041	0|0:0.413:0.631,0.326,0.043	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.664:0.005,0.325,0.67	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.402:0.639,0.32,0.041	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	0|1:0.694:0.319,0.667,0.014	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.061:0.939,0.06,0	1|1:1.998:0,0.002,0.998	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	0|0:0.009:0.991,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.402:0.639,0.32,0.041	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.084:0.917,0.083,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.965,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.873:0.289,0.549,0.162	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.95,0.05,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.402:0.639,0.32,0.041	1|1:2:0,0,1	1|1:1.964:0.002,0.033,0.965	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.402:0.639,0.32,0.041	0|0:0.054:0.947,0.052,0.001	0|0:0.402:0.639,0.32,0.041	0|0:0.185:0.854,0.108,0.039	0|0:0.402:0.639,0.32,0.041	0|0:0.402:0.639,0.32,0.041	0|0:0.402:0.639,0.32,0.041	0|0:0.402:0.639,0.32,0.041	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.402:0.639,0.32,0.041	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.402:0.639,0.32,0.041	0|0:0:1,0,0	0|0:0.402:0.639,0.32,0.041	0|0:0:1,0,0	0|0:0.402:0.639,0.32,0.041	0|0:0.402:0.639,0.32,0.041	0|0:0.407:0.635,0.323,0.042	0|0:0.402:0.639,0.32,0.041	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.023:0.978,0.022,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.043:0.957,0.042,0	1|1:1.969:0.001,0.03,0.969	0|0:0.402:0.639,0.32,0.041	0|0:0.332:0.697,0.275,0.029	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.048:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0.029:0.971,0.028,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.402:0.639,0.32,0.041	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.402:0.639,0.32,0.041	0|0:0.402:0.639,0.32,0.041	0|0:0:1,0,0	0|0:0.402:0.639,0.32,0.041	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.633:0.449,0.468,0.082	1|1:2:0,0,1	1|1:1.928:0.002,0.068,0.93	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16099002	SNP-3.16097648.	A	G	.	PASS	AR2=0.984;DR2=0.989;AF=0.495	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.946:0.001,0.052,0.947	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.874:0.005,0.116,0.879	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.845:0.007,0.141,0.852	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.925:0.001,0.072,0.927	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.56:0.454,0.533,0.013	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.484:0.52,0.475,0.005	0|0:0.016:0.984,0.016,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.216:0.784,0.215,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.917:0.002,0.079,0.919	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.958:0.001,0.04,0.959	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.089:0.911,0.089,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.038:0.962,0.037,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.69:0.024,0.262,0.714	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.67:0.463,0.404,0.133	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.183:0.83,0.156,0.013	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.145:0.858,0.139,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.039:0.961,0.038,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.888:0.002,0.109,0.89	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.038:0.963,0.037,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16100900	SNP-3.16099546.	C	A	.	PASS	AR2=0.942;DR2=0.956;AF=0.303	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.433:0.088,0.392,0.521	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.094:0.908,0.09,0.002	0|0:0.095:0.908,0.089,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.298:0.127,0.448,0.425	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.117:0.886,0.111,0.003	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|1:1.399:0.088,0.424,0.487	0|0:0.098:0.905,0.092,0.003	1|1:2:0,0,1	0|0:0.106:0.897,0.1,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.074:0.928,0.07,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0.064:0.936,0.063,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.021,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.957,0.043,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.557:0.058,0.327,0.615	0|1:1.34:0.103,0.454,0.443	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.68:0.01,0.301,0.69	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.313:0.12,0.447,0.433	0|0:0:1,0,0	1|0:1.206:0.157,0.479,0.363	1|0:0.921:0.241,0.597,0.162	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.722:0.002,0.274,0.724	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.421:0.083,0.413,0.504	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.164:0.847,0.142,0.011	1|1:1.403:0.077,0.444,0.48	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.322:0.114,0.449,0.436	0|1:1.563:0.051,0.336,0.614	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.297:0.121,0.462,0.418	0|0:0:1,0,0	1|1:1.572:0.019,0.391,0.591	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.051:0.951,0.047,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.906,0.091,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.086:0.917,0.081,0.002	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.014,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.097:0.906,0.091,0.003	0|0:0.097:0.906,0.091,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.722:0.018,0.241,0.74	1|0:1.104:0.185,0.526,0.289	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.969:0.001,0.03,0.97	0|0:0:1,0,0	0|0:0.02:0.98,0.019,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.726:0.021,0.231,0.748	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.947:0.002,0.05,0.949	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.886:0.004,0.106,0.89	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.533:0.044,0.378,0.577	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0.111:0.889,0.11,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16102230	SNP-3.16100876.	A	G	.	PASS	AR2=0.997;DR2=0.997;AF=0.488	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.956,0.043,0.001	0|1:1:0,1,0	0|0:0.102:0.9,0.098,0.002	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1.265:0.001,0.732,0.266	0|0:0:1,0,0	0|1:1:0,1,0	0|1:0.991:0.018,0.972,0.01	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.071:0.93,0.068,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.135:0.881,0.104,0.016	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16109853	SNP-3.16108499.	C	A	.	PASS	AR2=0.993;DR2=0.995;AF=0.425	GT:DS:GP	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.064:0.937,0.061,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.94,0.059,0.001	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.41:0.642,0.305,0.053	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.213:0.8,0.187,0.013	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.525:0.475,0.525,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.123:0.88,0.117,0.003	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16110799	SNP-3.16109445.	A	G	.	PASS	AR2=0.967;DR2=0.971;AF=0.224	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.12:0.884,0.113,0.004	0|0:0.149:0.856,0.14,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.211:0.796,0.197,0.007	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.126:0.877,0.12,0.003	0|0:0.098:0.904,0.094,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.114:0.89,0.105,0.004	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.182:0.827,0.163,0.009	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.137:0.871,0.122,0.007	0|0:0.302:0.714,0.27,0.016	1|1:2:0,0,1	0|0:0.083:0.918,0.08,0.002	0|0:0.09:0.912,0.085,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.094:0.909,0.088,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.159:0.847,0.146,0.007	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.049:0.952,0.047,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.114:0.89,0.107,0.004	0|0:0.117:0.886,0.112,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.089:0.913,0.085,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.131:0.873,0.123,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.135:0.87,0.125,0.005	0|0:0:1,0,0	0|0:0.097:0.904,0.094,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.127:0.876,0.121,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.959,0.04,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.147:0.858,0.136,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.942,0.057,0	0|0:0.051:0.95,0.049,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.04:0.96,0.04,0	0|0:0:1,0,0	0|0:0.044:0.956,0.044,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.152:0.854,0.141,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.206:0.806,0.182,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.175:0.833,0.159,0.008	0|0:0.289:0.729,0.253,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.163:0.844,0.148,0.007	0|0:0.082:0.92,0.079,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.102:0.902,0.095,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.101:0.902,0.095,0.003	0|0:0.083:0.919,0.079,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.099:0.904,0.092,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.086:0.917,0.081,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.158:0.849,0.143,0.008	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.149:0.855,0.14,0.005	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.199:0.814,0.174,0.013	1|1:2:0,0,1	0|0:0.072:0.931,0.065,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.104:0.9,0.095,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.951,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16111699	SNP-3.16110345.	A	G	.	PASS	AR2=0.986;DR2=0.989;AF=0.443	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.244:0.777,0.202,0.021	1|1:1.951:0.001,0.047,0.952	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.943:0.001,0.055,0.944	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.271:0.743,0.242,0.015	0|0:0.203:0.806,0.186,0.009	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.958,0.042,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.329:0.091,0.49,0.42	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.636:0.411,0.542,0.047	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.116:0.884,0.115,0.001	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.976:0,0.024,0.976	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.258:0.758,0.225,0.017	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.25:0.766,0.218,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.247:0.769,0.215,0.016	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.972:0,0.027,0.973	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.205:0.804,0.187,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.938:0.003,0.056,0.941	0|0:0:1,0,0	1|1:2:0,0,1
+3	16112054	SNP-3.16110700.	C	A	.	PASS	AR2=0.989;DR2=0.991;AF=0.324	GT:DS:GP	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.929:0.002,0.067,0.931	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.958,0.041,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.957:0,0.043,0.957	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.002:0.008,0.982,0.01	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	0|0:0.204:0.815,0.166,0.019	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.382:0.619,0.381,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.792:0.009,0.189,0.802	1|1:2:0,0,1	1|0:0.912:0.151,0.785,0.063	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.873:0.001,0.124,0.874	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.023,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.021:0.979,0.02,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.155:0.86,0.125,0.015	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.991:0.019,0.971,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.461:0.613,0.312,0.074	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16115076	SNP-3.16113722.	A	G	.	PASS	AR2=0.964;DR2=0.974;AF=0.312	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.905,0.093,0.002	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.148:0.862,0.127,0.01	0|0:0:1,0,0	0|0:0.049:0.952,0.047,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.069:0.935,0.062,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.948,0.051,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.86:0.003,0.135,0.862	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.258:0.755,0.232,0.013	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.769:0.337,0.557,0.106	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.147:0.863,0.127,0.01	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.067:0.933,0.066,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.979,0.021,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0	0|0:0.077:0.923,0.077,0	0|0:0.389:0.644,0.323,0.033	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.414:0.614,0.357,0.028	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.158:0.842,0.157,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.033:0.968,0.032,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.479:0.574,0.374,0.052	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.557:0.509,0.424,0.066	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.925,0.074,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.948,0.051,0.001	0|0:0:1,0,0	1|1:1.713:0.025,0.237,0.738	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.46:0.602,0.336,0.062	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.394:0.618,0.369,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.197:0.813,0.178,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.122:0.879,0.12,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.379:0.096,0.429,0.475	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.05:0.951,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.085:0.918,0.079,0.003	0|0:0.052:0.949,0.05,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.411:0.633,0.323,0.044	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.969:0,0.031,0.969	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.948,0.051,0.001	1|1:1.989:0,0.011,0.989	1|1:1.647:0.031,0.292,0.678	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16116032	SNP-3.16114678.	A	G	.	PASS	AR2=0.84;DR2=0.882;AF=0.483	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.889:0.297,0.516,0.187	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.314:0.142,0.402,0.456	0|0:0:1,0,0	0|1:1.39:0.094,0.422,0.484	0|1:1.342:0.103,0.452,0.445	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.535:0.054,0.358,0.588	1|1:1.481:0.068,0.384,0.548	1|1:2:0,0,1	1|1:1.462:0.073,0.392,0.535	0|0:0:1,0,0	1|1:1.467:0.061,0.411,0.528	0|0:0:1,0,0	1|0:1.419:0.082,0.417,0.501	1|1:2:0,0,1	1|1:1.47:0.071,0.389,0.54	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.142:0.858,0.142,0	1|1:1.483:0.067,0.382,0.55	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.158:0.129,0.583,0.287	1|1:1.316:0.096,0.492,0.412	0|1:1.063:0.21,0.518,0.272	1|1:2:0,0,1	0|0:0.731:0.432,0.405,0.163	1|1:2:0,0,1	1|0:1.302:0.113,0.473,0.414	1|1:2:0,0,1	0|0:0.301:0.729,0.241,0.03	1|1:1.412:0.083,0.422,0.495	1|0:1.265:0.119,0.496,0.385	1|1:2:0,0,1	1|1:1.54:0.054,0.352,0.594	0|0:0:1,0,0	0|0:0.211:0.814,0.162,0.025	0|1:0.869:0.34,0.45,0.21	0|1:1.407:0.088,0.417,0.495	1|1:2:0,0,1	1|1:1.543:0.054,0.35,0.596	1|1:1.564:0.049,0.338,0.613	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.083:0.185,0.547,0.268	1|0:1.221:0.141,0.498,0.362	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.471:0.071,0.388,0.541	1|1:1.596:0.039,0.325,0.636	0|1:1.62:0.035,0.311,0.655	1|1:1.493:0.063,0.38,0.556	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.579:0.044,0.333,0.623	1|1:1.39:0.089,0.432,0.479	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.57:0.047,0.336,0.617	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.318:0.125,0.432,0.443	0|0:0:1,0,0	1|1:1.558:0.05,0.342,0.608	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.321:0.096,0.488,0.416	0|0:0:1,0,0	1|0:1.194:0.156,0.494,0.35	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.47:0.071,0.388,0.541	0|0:0:1,0,0	0|0:0.722:0.422,0.435,0.143	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.542:0.054,0.35,0.596	0|0:0:1,0,0	1|0:1.532:0.06,0.349,0.592	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.511:0.072,0.345,0.583	1|1:2:0,0,1	1|1:1.471:0.071,0.388,0.541	1|1:2:0,0,1	1|1:1.448:0.076,0.399,0.524	0|0:0:1,0,0	1|1:1.989:0,0.011,0.989	1|0:1.529:0.057,0.358,0.585	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.487:0.066,0.381,0.553	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.713:0.021,0.244,0.735	1|1:1.587:0.054,0.306,0.641	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.545:0.053,0.35,0.597	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.916:0.31,0.463,0.226	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.551:0.052,0.346,0.602	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.533:0.055,0.357,0.588	0|1:1.6:0.039,0.322,0.639	1|1:2:0,0,1	1|1:1.629:0.035,0.3,0.664	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.471:0.071,0.388,0.541	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.471:0.071,0.388,0.541	0|0:0:1,0,0	0|1:1.47:0.071,0.388,0.541	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.543:0.054,0.35,0.597	1|0:1.575:0.047,0.331,0.622	1|1:1.572:0.045,0.338,0.617	1|1:1.551:0.052,0.346,0.603	0|1:1.574:0.048,0.33,0.622	1|1:1.549:0.052,0.346,0.601	1|1:1.629:0.035,0.302,0.663	1|1:1.619:0.04,0.3,0.66	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.257:0.12,0.504,0.377	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.471:0.071,0.388,0.542	1|1:2:0,0,1	0|1:0.661:0.462,0.414,0.123	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.623:0.037,0.303,0.66
+3	16116761	SNP-3.16115407.	A	G	.	PASS	AR2=0.934;DR2=0.948;AF=0.321	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.135:0.869,0.127,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.937:0.284,0.495,0.221	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.346:0.105,0.444,0.451	0|1:0.95:0.277,0.497,0.226	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.266:0.135,0.464,0.401	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.253:0.14,0.468,0.393	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.18:0.829,0.162,0.009	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.531:0.056,0.358,0.586	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.138:0.182,0.497,0.321	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.531:0.056,0.358,0.586	1|1:1.531:0.056,0.358,0.586	1|0:1.42:0.079,0.422,0.499	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.266:0.135,0.464,0.401	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.327:0.691,0.292,0.017	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.403:0.633,0.33,0.036	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.606:0.437,0.52,0.043	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.975,0.025,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.028:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.11:0.189,0.512,0.299	0|0:0.028:0.973,0.027,0	0|0:0:1,0,0	0|1:0.981:0.258,0.502,0.24	1|1:1.523:0.057,0.362,0.58	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.618:0.046,0.29,0.664	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.53:0.056,0.358,0.586	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.937:0.284,0.495,0.221	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:1.266:0.135,0.464,0.401	1|1:1.266:0.135,0.464,0.401	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.937:0.284,0.495,0.221	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.111:0.893,0.102,0.005	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16117174	SNP-3.16115820.	A	G	.	PASS	AR2=0.893;DR2=0.916;AF=0.373	GT:DS:GP	1|0:0.879:0.316,0.489,0.195	0|0:0:1,0,0	0|1:0.769:0.334,0.563,0.103	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.021:0.979,0.02,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.272:0.133,0.463,0.405	0|0:0.896:0.305,0.494,0.201	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.205:0.155,0.486,0.36	0|1:1.266:0.135,0.463,0.402	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.904:0.301,0.494,0.205	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.237:0.143,0.476,0.381	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.703:0.397,0.503,0.1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.209:0.147,0.498,0.355	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.75:0.38,0.489,0.131	0|1:1.335:0.106,0.453,0.441	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.404:0.086,0.424,0.49	0|0:0.816:0.35,0.485,0.166	0|1:1.269:0.123,0.485,0.392	0|0:0:1,0,0	1|0:0.935:0.258,0.55,0.193	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.895:0.306,0.494,0.201	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.283:0.717,0.283,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.28:0.721,0.279,0	0|0:0.35:0.65,0.35,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.478:0.069,0.385,0.546	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.971:0.001,0.027,0.972	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.266:0.135,0.464,0.401	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.277:0.131,0.461,0.408	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.52:0.056,0.368,0.576	1|1:1.27:0.134,0.462,0.404	0|0:0.505:0.575,0.345,0.08	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.663:0.448,0.441,0.111	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.04:0.224,0.513,0.263	1|0:1.426:0.083,0.409,0.508	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.906:0.299,0.495,0.206	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.663:0.448,0.441,0.111	1|1:2:0,0,1	0|1:1.105:0.22,0.455,0.325	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.266:0.135,0.464,0.401	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.485:0.067,0.381,0.552	1|1:1.483:0.067,0.382,0.55	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.474:0.07,0.386,0.544	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.483:0.067,0.382,0.55	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.895:0.306,0.494,0.201	1|0:0.895:0.306,0.494,0.201	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.484:0.067,0.382,0.551	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.971:0.001,0.027,0.972	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.268:0.135,0.463,0.402	1|1:1.418:0.075,0.432,0.493	0|0:0:1,0,0	0|0:0.94:0.262,0.537,0.201	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16118924	SNP-3.16117570.	A	G	.	PASS	AR2=1;DR2=1;AF=0.301	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.953:0.001,0.045,0.954	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16121614	SNP-3.16120260.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.288	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.967:0,0.032,0.968	0|0:0:1,0,0	1|1:1.979:0,0.021,0.979	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0.076:0.925,0.074,0.001	1|1:1.996:0,0.003,0.996	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.964:0,0.036,0.964	0|0:0:1,0,0	1|1:1.976:0,0.023,0.977	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.992:0.028,0.953,0.019	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.971:0,0.029,0.971	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16123637	SNP-3.16122283.	A	G	.	PASS	AR2=0.989;DR2=0.99;AF=0.279	GT:DS:GP	1|1:1.868:0.006,0.121,0.873	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.955,0.044,0.001	0|1:1:0,1,0	0|0:0.045:0.955,0.044,0	0|0:0.058:0.943,0.056,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.945,0.054,0.001	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.067:0.934,0.065,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.864:0.001,0.134,0.865	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.926:0.001,0.071,0.927	1|1:2:0,0,1	1|1:1.934:0.001,0.064,0.935	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.946:0.001,0.051,0.947	1|1:1.871:0.005,0.119,0.876	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.145:0.855,0.145,0	1|1:2:0,0,1	1|1:1.983:0,0.016,0.983	1|1:2:0,0,1	1|1:1.911:0.002,0.085,0.913	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.884:0.003,0.11,0.887	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.944:0.001,0.053,0.946	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.876:0.003,0.117,0.879	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.898:0.003,0.096,0.901	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.955,0.045,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.955,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.871:0.003,0.122,0.874	0|0:0:1,0,0	1|1:1.92:0.002,0.077,0.921	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.04:0.96,0.039,0	0|0:0.073:0.928,0.072,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.968,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.906:0.003,0.089,0.909	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.973:0,0.027,0.973	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16124670	SNP-3.16123316.	A	G	.	PASS	AR2=0.987;DR2=0.99;AF=0.262	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.131:0.87,0.129,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.663:0.027,0.283,0.69	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.805:0.007,0.181,0.812	1|1:1.671:0.027,0.274,0.699	0|0:0.004:0.996,0.004,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.283:0.718,0.282,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.609:0.035,0.321,0.644	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.767:0.011,0.211,0.778	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.732:0.021,0.226,0.753	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16126350	SNP-3.16124996.	C	A	.	PASS	AR2=0.992;DR2=0.994;AF=0.376	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:1.731:0,0.269,0.731	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.954,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.232:0.773,0.222,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.525:0.001,0.474,0.525	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.438:0.585,0.393,0.022	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.143:0.079,0.699,0.222	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.045:0.955,0.044,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16127787	SNP-3.16126433.	A	G	.	PASS	AR2=0.982;DR2=0.986;AF=0.204	GT:DS:GP	0|0:0:1,0,0	0|0:0.048:0.953,0.046,0.001	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.108:0.893,0.105,0.001	0|0:0.317:0.707,0.27,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.312:0.715,0.257,0.028	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.185:0.088,0.64,0.273	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.148:0.856,0.14,0.004	0|0:0:1,0,0	0|0:0.239:0.776,0.208,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.832:0.01,0.149,0.841	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.462:0.583,0.372,0.045	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.074:0.928,0.071,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16128346	SNP-3.16126992.	C	A	.	PASS	AR2=0.991;DR2=0.993;AF=0.397	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:1.994:0,0.006,0.994	1|1:1.929:0.001,0.068,0.93	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.931:0,0.069,0.931	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0.041:0.961,0.038,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.799:0.201,0.799,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.337:0.689,0.286,0.025	0|0:0:1,0,0	0|0:0.146:0.855,0.143,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.2:0.81,0.18,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.242:0.771,0.216,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.205:0.807,0.18,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.082:0.918,0.081,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:1.978:0,0.022,0.978	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.984:0,0.016,0.984	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.968,0.031,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.176:0.831,0.161,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16131077	SNP-3.16129723.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.337	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.976:0,0.024,0.976	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.132:0.084,0.701,0.216	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.97:0,0.029,0.97	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16132391	SNP-3.16131037.	A	G	.	PASS	AR2=0.975;DR2=0.983;AF=0.3	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.3:0.02,0.66,0.32	1|0:1.312:0.014,0.661,0.325	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.982:0,0.018,0.982	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.831:0.269,0.632,0.099	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.314:0.014,0.659,0.327	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1.308:0.013,0.665,0.322	1|1:2:0,0,1	0|1:1.303:0.012,0.672,0.315	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.312:0.014,0.661,0.325	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.305:0.013,0.67,0.318	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.263:0.016,0.706,0.279	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.48:0.083,0.354,0.563	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.35:0.106,0.438,0.456	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.02:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.014:0.986,0.013,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16133002	SNP-3.16131648.	A	G	.	PASS	AR2=1;DR2=1;AF=0.342	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.977:0,0.023,0.977	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.976:0,0.024,0.976	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16135246	SNP-3.16133892.	A	G	.	PASS	AR2=1;DR2=1;AF=0.278	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16135358	SNP-3.16134004.	A	G	.	PASS	AR2=1;DR2=1;AF=0.272	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16139308	SNP-3.16137954.	C	A	.	PASS	AR2=1;DR2=1;AF=0.321	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16140836	SNP-3.16139482.	A	G	.	PASS	AR2=0.995;DR2=0.996;AF=0.394	GT:DS:GP	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1.562:0.005,0.428,0.567	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.877:0.004,0.115,0.881	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.266:0.026,0.683,0.292	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.843:0.006,0.144,0.849	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.843:0.006,0.144,0.85	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.96:0.001,0.039,0.96	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16142450	SNP-3.16141096.	A	G	.	PASS	AR2=0.984;DR2=0.988;AF=0.362	GT:DS:GP	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1.013:0.171,0.646,0.183	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1.26:0.011,0.718,0.271	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.847:0.343,0.467,0.19	0|0:0:1,0,0	0|0:0.602:0.504,0.39,0.106	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.941:0.281,0.498,0.221	0|0:0:1,0,0	0|0:0.462:0.592,0.354,0.054	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16142960	SNP-3.16141606.	C	A	.	PASS	AR2=1;DR2=1;AF=0.323	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16146021	SNP-3.16144667.	A	G	.	PASS	AR2=0.99;DR2=0.991;AF=0.393	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.814:0.009,0.169,0.823	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.819:0.012,0.157,0.831	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.659:0.011,0.319,0.67	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.819:0.007,0.167,0.826	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.862:0.004,0.129,0.867	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.673:0.016,0.294,0.689	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.071:0.931,0.068,0.001	1|1:1.917:0.003,0.077,0.92	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.879:0.124,0.872,0.004	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.757:0.015,0.212,0.772	0|0:0:1,0,0	0|0:0.061:0.94,0.058,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.05:0.95,0.05,0	1|1:2:0,0,1	1|1:1.93:0.002,0.067,0.931	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.902:0.003,0.091,0.906	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.913:0.003,0.081,0.916	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16147747	SNP-3.16146393.	C	A	.	PASS	AR2=0.988;DR2=0.99;AF=0.353	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.954,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.671:0.47,0.388,0.141	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.032:0.252,0.464,0.284	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.898:0.308,0.486,0.206	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.898:0.308,0.486,0.206	0|0:0:1,0,0
+3	16147908	SNP-3.16146554.	C	A	.	PASS	AR2=0.991;DR2=0.993;AF=0.348	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|0:0.461:0.548,0.444,0.008	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.037:0.963,0.036,0.001	0|0:0.073:0.928,0.071,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.084:0.918,0.08,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1.291:0.003,0.702,0.295	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.061:0.002,0.935,0.063	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.989:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.144:0.862,0.132,0.006	1|1:1.951:0,0.049,0.951	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.049:0.952,0.048,0.001	1|1:2:0,0,1	0|0:0.061:0.94,0.059,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	0|0:0.073:0.928,0.071,0.001	0|0:0.087:0.915,0.083,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.927,0.071,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.051:0.95,0.049,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.112:0.889,0.11,0.001	0|0:0.064:0.937,0.062,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.937,0.062,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.065:0.938,0.059,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16149035	SNP-3.16147681.	A	G	.	PASS	AR2=0.991;DR2=0.992;AF=0.191	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0.029:0.971,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.155:0.848,0.148,0.004	1|1:1.957:0.001,0.041,0.958	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.031:0.969,0.03,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.61:0.01,0.37,0.62	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.077:0.924,0.076,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.087:0.914,0.084,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.039:0.962,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.082:0.921,0.077,0.003	0|0:0.066:0.935,0.064,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.03:0.97,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.057:0.943,0.057,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.959:0.001,0.04,0.959	0|0:0.032:0.969,0.03,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.034:0.966,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.024:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16150473	SNP-3.16149119.	A	G	.	PASS	AR2=0.994;DR2=0.995;AF=0.416	GT:DS:GP	0|0:0:1,0,0	0|0:0.095:0.907,0.091,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.506:0,0.494,0.506	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.929,0.068,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.707:0.01,0.274,0.717	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0.107:0.896,0.101,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.203:0.808,0.182,0.011	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.053:0.947,0.052,0.001	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.025:0.975,0.024,0	0|0:0.014:0.986,0.014,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0
+3	16155821	SNP-3.16154467.	A	G	.	PASS	AR2=0.988;DR2=0.99;AF=0.257	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.857:0.006,0.132,0.863	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.748:0.253,0.746,0.001	1|1:2:0,0,1	0|1:1.129:0.058,0.755,0.187	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.672:0.011,0.306,0.683	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.856:0.002,0.141,0.857	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.348:0.655,0.341,0.003	0|0:0:1,0,0	1|1:1.874:0.001,0.123,0.876	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.911:0.002,0.085,0.913	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.806:0.012,0.17,0.818	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.976:0,0.024,0.976	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.747:0.012,0.229,0.759	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16156517	SNP-3.16155163.	A	G	.	PASS	AR2=0.981;DR2=0.985;AF=0.235	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.689:0.021,0.268,0.71	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:0.771:0.229,0.771,0	1|1:2:0,0,1	0|1:1.232:0.11,0.548,0.342	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.821:0.005,0.169,0.826	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.872:0.001,0.126,0.873	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.941:0.001,0.056,0.942	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.585:0.045,0.325,0.63	1|1:1.533:0.055,0.356,0.588	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.872:0.005,0.117,0.877	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.845:0.008,0.14,0.853	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.64:0.009,0.342,0.649	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16158960	SNP-3.16157606.	A	G	.	PASS	AR2=0.915;DR2=0.939;AF=0.22	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.511:0.552,0.385,0.063	0|0:0:1,0,0	0|0:0.292:0.734,0.239,0.027	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.063:0.937,0.062,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.326:0.129,0.415,0.455	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.288:0.137,0.438,0.425	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.015:0.985,0.014,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.235:0.146,0.472,0.381	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.017:0.246,0.492,0.262	0|0:0:1,0,0	0|0:0.382:0.65,0.318,0.032	0|0:0.627:0.461,0.452,0.087	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.614:0.462,0.463,0.076	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.789:0.372,0.467,0.161	0|0:0:1,0,0	0|0:0.728:0.426,0.421,0.153	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.187:0.816,0.18,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.57:0.504,0.422,0.074	0|0:0.146:0.859,0.135,0.005	0|0:0:1,0,0	0|0:0.093:0.911,0.086,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.674:0.442,0.443,0.115	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.361:0.677,0.285,0.038	0|0:0.167:0.839,0.155,0.006	0|0:0.044:0.957,0.041,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.23:0.783,0.204,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.17:0.834,0.161,0.005	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.303:0.109,0.479,0.412	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.114:0.89,0.107,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.255:0.759,0.226,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.333:0.69,0.286,0.023	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.328:0.692,0.288,0.02	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.575:0.51,0.406,0.085	0|1:1.154:0.186,0.474,0.34	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.496:0.569,0.366,0.065	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.45:0.609,0.333,0.058	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.449:0.599,0.354,0.048	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16158961	SNP-3.16157607.	A	G	.	PASS	AR2=0.95;DR2=0.965;AF=0.502	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.585:0.053,0.309,0.638	1|1:2:0,0,1	1|1:1.479:0.068,0.384,0.547	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.063:0.196,0.545,0.259	1|0:1:0,1,0	1|1:1.642:0.038,0.283,0.679	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.524:0.053,0.369,0.577	0|0:0:1,0,0	1|1:1.73:0.028,0.213,0.759	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.63:0.042,0.285,0.673	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1.342:0.085,0.487,0.427	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.461:0.069,0.4,0.53	1|1:2:0,0,1	1|1:1.613:0.018,0.351,0.631	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.588:0.054,0.304,0.642	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.377:0.064,0.496,0.44	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.302:0.07,0.559,0.371	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.871:0.007,0.115,0.878	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.477:0.096,0.332,0.573	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.656:0.035,0.273,0.692	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.495:0.066,0.373,0.561	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.509:0.063,0.366,0.572	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1.371:0.006,0.618,0.376	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.771:0.017,0.195,0.788	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.498:0.066,0.37,0.564	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.843:0.006,0.145,0.849	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16159744	SNP-3.16158390.	C	A	.	PASS	AR2=0.992;DR2=0.993;AF=0.36	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.905:0.002,0.091,0.907	1|1:2:0,0,1	0|1:1.142:0.116,0.627,0.257	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.676:0.024,0.276,0.7	0|1:1:0,1,0	1|1:1.844:0.005,0.146,0.849	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.809:0.009,0.173,0.818	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.843:0.003,0.15,0.846	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.783:0.013,0.191,0.796	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.893:0.005,0.097,0.898	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16159923	SNP-3.16158569.	A	G	.	PASS	AR2=0.997;DR2=0.998;AF=0.431	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.976:0,0.024,0.976	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.573:0.017,0.393,0.59	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.019,0.981	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.914:0.001,0.083,0.915	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16163231	SNP-3.16161877.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.278	GT:DS:GP	1|1:1.974:0,0.025,0.975	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.969,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.977:0,0.023,0.977	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.885:0.002,0.111,0.887	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.928:0.001,0.07,0.929	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16163777	SNP-3.16162423.	A	G	.	PASS	AR2=0.988;DR2=0.989;AF=0.439	GT:DS:GP	1|1:1.945:0.001,0.053,0.946	0|0:0:1,0,0	1|1:1.934:0.001,0.063,0.935	1|1:1.953:0,0.046,0.953	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.972:0,0.027,0.973	1|1:1.992:0,0.008,0.992	1|1:1.958:0.001,0.041,0.959	1|1:1.958:0.001,0.04,0.959	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.819:0.013,0.155,0.832	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.966:0,0.034,0.966	1|1:1.973:0,0.026,0.973	1|1:2:0,0,1	1|1:1.963:0.001,0.035,0.964	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.975:0,0.025,0.975	0|0:0:1,0,0	1|1:1.948:0.001,0.05,0.949	1|1:1.96:0,0.04,0.96	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.942:0.001,0.057,0.943	1|1:1.914:0.002,0.082,0.916	1|1:1.916:0.001,0.082,0.917	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.95:0.001,0.049,0.95	1|1:2:0,0,1	1|1:1.852:0.012,0.124,0.864	1|1:1.956:0,0.043,0.957	1|1:1.95:0.001,0.049,0.951	0|1:0.837:0.163,0.836,0	1|1:2:0,0,1	1|1:1.911:0.002,0.084,0.914	1|1:1.649:0.008,0.336,0.657	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.948:0.001,0.05,0.949	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.958:0.001,0.041,0.958	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.974:0,0.025,0.975	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.956:0,0.043,0.957	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.85:0.004,0.142,0.854	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.94:0.001,0.058,0.941	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.978:0,0.021,0.979	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.956:0.001,0.042,0.957	0|0:0.195:0.805,0.195,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.968:0,0.032,0.968	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.951:0.001,0.047,0.952	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.94:0.001,0.058,0.941	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.922:0,0.078,0.922	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.976:0,0.023,0.976	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.937:0.001,0.06,0.939	1|1:1.928:0.001,0.069,0.93	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.906:0.002,0.09,0.908	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16164237	SNP-3.16162883.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.336	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.983:0,0.016,0.984	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.162:0.015,0.809,0.176	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.816:0.011,0.161,0.827	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.253:0.081,0.585,0.334	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.929:0,0.071,0.929	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:1.944:0.001,0.055,0.944	1|1:1.917:0,0.083,0.917	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0.002,0.997,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.983:0,0.017,0.983	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.8:0,0.199,0.8	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.985:0,0.015,0.985	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.963:0,0.037,0.963	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.951:0.001,0.047,0.952	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16167564	SNP-3.16166210.	C	A	.	PASS	AR2=1;DR2=1;AF=0.387	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16167942	SNP-3.16166588.	A	G	.	PASS	AR2=0.929;DR2=0.945;AF=0.207	GT:DS:GP	0|0:0.215:0.8,0.186,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.123:0.883,0.11,0.007	0|0:0.218:0.794,0.194,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.344:0.684,0.288,0.028	0|0:0.499:0.535,0.43,0.035	1|1:2:0,0,1	0|1:0.656:0.412,0.521,0.068	0|0:0:1,0,0	0|0:0.325:0.7,0.274,0.025	0|0:0.199:0.812,0.178,0.01	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.256:0.76,0.224,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.265:0.753,0.229,0.018	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.35:0.682,0.287,0.031	0|1:1:0,1,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.291:0.715,0.279,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.292:0.728,0.253,0.02	0|1:1:0,1,0	0|0:0.06:0.94,0.06,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.325:0.7,0.275,0.025	1|0:0.648:0.386,0.581,0.033	0|0:0.416:0.638,0.308,0.054	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.099:0.907,0.087,0.006	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.097:0.904,0.095,0.001	0|0:0:1,0,0	0|0:0.328:0.703,0.265,0.032	0|0:0:1,0,0	0|0:0.281:0.738,0.242,0.019	0|0:0.317:0.707,0.269,0.024	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.994:0.041,0.925,0.034	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.203:0.806,0.186,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.874:0.005,0.116,0.879	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	0|0:0.15:0.861,0.128,0.011	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.945,0.055,0	0|0:0.354:0.68,0.287,0.034	0|1:1:0,1,0	0|0:0.297:0.722,0.258,0.02	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0.041:0.959,0.04,0.001	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.25:0.773,0.203,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.306:0.718,0.259,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.305:0.723,0.248,0.029	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.915:0.36,0.365,0.275
+3	16168255	SNP-3.16166901.	A	G	.	PASS	AR2=0.887;DR2=0.919;AF=0.214	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.602:0.504,0.389,0.107	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.047:0.221,0.511,0.268	1|1:1.381:0.126,0.367,0.507	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.767:0.424,0.384,0.192	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.977:0.219,0.585,0.196	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.123:0.242,0.393,0.365	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.506:0.551,0.391,0.057	0|0:0:1,0,0	0|0:0.501:0.56,0.378,0.061	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.911:0.281,0.528,0.191	1|1:2:0,0,1	0|0:0.401:0.631,0.337,0.032	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.439:0.61,0.34,0.05	0|0:0.445:0.598,0.359,0.043	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.687:0.441,0.432,0.127	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.948,0.051,0.001	0|0:0.235:0.766,0.233,0.001	0|0:0:1,0,0	1|0:0.622:0.419,0.539,0.041	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.101:0.903,0.093,0.004	0|0:0.166:0.835,0.164,0.001	0|0:0.309:0.708,0.275,0.017	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.346:0.683,0.288,0.029	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.74:0.439,0.382,0.179	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.992,0.008,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.046:0.957,0.04,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.098:0.212,0.478,0.31	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.343:0.123,0.412,0.466	1|0:0.967:0.257,0.519,0.224	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.212:0.8,0.187,0.012	0|0:0:1,0,0	1|0:0.725:0.399,0.478,0.124	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.454:0.076,0.394,0.53	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.171:0.838,0.153,0.009	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.429:0.621,0.328,0.051	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.083:0.191,0.535,0.274	0|0:0.075:0.926,0.072,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.671:0.026,0.276,0.698	0|0:0.212:0.798,0.193,0.01	0|0:0.387:0.63,0.352,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.321:0.705,0.269,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.35:0.68,0.289,0.03	0|1:0.867:0.318,0.496,0.186	0|0:0.06:0.941,0.059,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16169101	SNP-3.16167747.	A	G	.	PASS	AR2=0.986;DR2=0.988;AF=0.257	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.964:0,0.036,0.964	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.942:0.001,0.055,0.943	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.163:0.038,0.762,0.201	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.347:0.1,0.453,0.447	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.978:0.001,0.021,0.978	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.915:0.002,0.08,0.917	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.973:0,0.026,0.974	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.881:0.36,0.399,0.241	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.856:0.003,0.138,0.859	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.968:0,0.032,0.968	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.415:0.017,0.551,0.432	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.96:0.001,0.039,0.96	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.872:0.008,0.112,0.88	0|0:0:1,0,0	1|1:1.942:0.001,0.056,0.943	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.949:0.001,0.049,0.95	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16173019	SNP-3.16171665.	C	A	.	PASS	AR2=0.968;DR2=0.976;AF=0.244	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.936,0.063,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.96:0.001,0.039,0.96	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:1.498:0.059,0.384,0.557	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.388:0.633,0.346,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.349:0.666,0.32,0.014	0|0:0:1,0,0	0|0:0.05:0.951,0.049,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.633:0.4,0.566,0.034	0|0:0:1,0,0	0|0:0.289:0.728,0.255,0.017	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.285:0,0.714,0.285	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.31:0.703,0.284,0.013	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.212:0.796,0.195,0.009	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.114:0.891,0.105,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.465:0.549,0.437,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.808:0.007,0.178,0.815	0|0:0.194:0.812,0.181,0.007	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.933:0.001,0.065,0.934	1|1:1.971:0,0.029,0.971	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.932:0.004,0.061,0.936	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.654:0.03,0.285,0.684	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.1:0.902,0.095,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.254:0.768,0.21,0.022	0|0:0:1,0,0	0|0:0.184:0.816,0.184,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.748:0.02,0.212,0.768	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.031:0.969,0.03,0.001	0|0:0.018:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16173556	SNP-3.16172202.	C	A	.	PASS	AR2=0.949;DR2=0.962;AF=0.354	GT:DS:GP	0|0:0:1,0,0	1|1:1.805:0.011,0.173,0.816	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.898:0.004,0.093,0.903	0|0:0:1,0,0	1|0:1.372:0.121,0.387,0.493	1|1:1.984:0,0.015,0.984	1|1:1.661:0.033,0.273,0.694	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.58:0.028,0.364,0.608	1|1:2:0,0,1	1|0:1.245:0.099,0.556,0.345	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.814:0.005,0.176,0.819	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.734:0.023,0.22,0.757	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.764:0.009,0.219,0.773	1|1:2:0,0,1	1|1:1.579:0.045,0.331,0.624	1|1:1.98:0.001,0.019,0.98	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.616:0.032,0.321,0.647	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.677:0.033,0.258,0.71	1|1:1.984:0,0.016,0.984	1|1:1.642:0.04,0.278,0.682	1|1:1.683:0.031,0.254,0.714	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.68:0.035,0.249,0.715	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1.31:0.098,0.494,0.408	0|0:0:1,0,0	1|1:1.453:0.002,0.542,0.456	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.603:0.043,0.311,0.646	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.927:0.001,0.071,0.928	1|1:1.982:0,0.017,0.983	1|1:1.95:0.003,0.044,0.953	1|1:1.84:0.013,0.134,0.853	1|1:1.923:0.002,0.072,0.926	1|1:1.739:0.021,0.218,0.76	1|1:1.601:0.008,0.382,0.61	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.914:0,0.085,0.915	1|0:1.163:0.249,0.339,0.412	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:1.681:0.034,0.251,0.715	0|0:0:1,0,0	1|1:1.659:0.034,0.272,0.693	0|0:0:1,0,0	1|1:1.669:0.032,0.268,0.7	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.954:0.001,0.044,0.955	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.795:0.013,0.178,0.809	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.914:0.001,0.084,0.915	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.872:0.009,0.111,0.881	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.755:0,0.245,0.755	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.801:0.009,0.181,0.81	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.019,0.981	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16173793	SNP-3.16172439.	C	A	.	PASS	AR2=0.961;DR2=0.971;AF=0.361	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.778:0.012,0.198,0.79	0|0:0:1,0,0	1|1:1.559:0.052,0.338,0.611	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.888:0.004,0.105,0.892	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.711:0.018,0.254,0.729	0|0:0.042:0.958,0.041,0.001	1|1:1.82:0.011,0.159,0.831	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.039:0.962,0.038,0	0|0:0:1,0,0	1|1:1.632:0.036,0.295,0.668	0|0:0.095:0.908,0.088,0.003	0|0:0:1,0,0	0|0:0.053:0.947,0.053,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0.059:0.942,0.057,0.001	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.959,0.041,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.165:0.836,0.164,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.959,0.04,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.775:0.014,0.196,0.789	0|0:0:1,0,0	0|1:1.525:0.058,0.359,0.583	1|1:2:0,0,1	1|1:1.505:0.063,0.369,0.568	1|1:1.557:0.052,0.34,0.608	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.576:0.049,0.327,0.624	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.929:0,0.071,0.929	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.383:0.11,0.396,0.494	0|0:0:1,0,0	1|1:1.753:0.009,0.229,0.762	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.56:0.052,0.337,0.612	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.711:0.035,0.219,0.746	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.718:0.012,0.257,0.731	1|1:1.947:0,0.053,0.947	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.235:0.765,0.235,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.869:0.005,0.121,0.874	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.533:0.057,0.353,0.59	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.933,0.066,0.001	0|1:1:0,1,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.089:0.913,0.084,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0.017:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.704:0.036,0.224,0.74	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.98:0,0.02,0.98	0|0:0.046:0.955,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0
+3	16175848	SNP-3.16174494.	C	A	.	PASS	AR2=1;DR2=1;AF=0.352	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.95,0.05,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.966:0,0.033,0.967	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16177665	SNP-3.16176311.	C	A	.	PASS	AR2=0.989;DR2=0.991;AF=0.366	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.034:0.966,0.033,0.001	0|0:0.051:0.949,0.05,0.001	0|0:0:1,0,0	0|0:0.043:0.958,0.041,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.955,0.045,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.084:0.918,0.08,0.002	0|0:0.479:0.631,0.259,0.11	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.181:0.827,0.166,0.008	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.4:0.608,0.384,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.168:0.833,0.165,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.023:0.978,0.022,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.06:0.942,0.057,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.104:0.904,0.089,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.148:0.854,0.144,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.243:0.757,0.242,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.103:0.905,0.088,0.008	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.16:0.843,0.153,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16178411	SNP-3.16177057.	C	A	.	PASS	AR2=0.939;DR2=0.954;AF=0.426	GT:DS:GP	1|1:2:0,0,1	1|1:1.553:0.053,0.34,0.606	1|1:1.769:0.014,0.202,0.783	1|1:2:0,0,1	1|1:1.825:0.01,0.156,0.834	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.133:0.871,0.124,0.005	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.551:0.082,0.285,0.633	0|0:0.116:0.885,0.113,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.082:0.92,0.077,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.27:0.167,0.396,0.437	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.26:0.786,0.167,0.046	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.962,0.037,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.256:0.762,0.219,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.213:0.802,0.184,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.161:0.849,0.14,0.01	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.49:0.039,0.432,0.529	1|1:2:0,0,1	1|1:1.24:0.145,0.469,0.385	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.256:0.125,0.494,0.381	1|1:1.66:0.028,0.284,0.688	1|0:1.374:0.11,0.406,0.484	1|0:1.149:0.171,0.508,0.321	1|1:1.969:0,0.031,0.969	1|1:1.157:0.183,0.478,0.339	1|0:1.296:0.126,0.451,0.423	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.366:0.105,0.424,0.471	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.968:0,0.031,0.968	1|1:1.961:0.001,0.037,0.962	1|1:2:0,0,1	0|0:0.104:0.902,0.092,0.006	1|0:1.31:0.118,0.454,0.428	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.786:0.002,0.211,0.788	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.807:0.006,0.182,0.812	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.956:0,0.044,0.956	1|1:1.962:0.002,0.034,0.964	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.173:0.834,0.16,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.96,0.038,0.002	0|0:0.156:0.851,0.143,0.006	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.157:0.844,0.155,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.814:0.005,0.175,0.819	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.103:0.902,0.093,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.936:0.003,0.059,0.939	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.546:0.098,0.259,0.644	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.65:0.054,0.242,0.704	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.084:0.918,0.08,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.488:0.077,0.357,0.565	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.752:0.022,0.205,0.773	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.401:0.716,0.167,0.117	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.058:0.943,0.056,0.001	1|1:1.626:0.027,0.321,0.652	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.174:0.838,0.15,0.012
+3	16180766	SNP-3.16179412.	C	A	.	PASS	AR2=1;DR2=1;AF=0.447	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0
+3	16184927	SNP-3.16183573.	C	A	.	PASS	AR2=1;DR2=1;AF=0.354	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.962:0.001,0.035,0.963	0|0:0.032:0.968,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16185673	SNP-3.16184319.	A	G	.	PASS	AR2=1;DR2=1;AF=0.317	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16186851	SNP-3.16185497.	A	G	.	PASS	AR2=0.998;DR2=0.999;AF=0.287	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.962:0,0.037,0.963	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.983:0,0.017,0.983	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.776:0.228,0.768,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16188584	SNP-3.16187230.	A	G	.	PASS	AR2=0.998;DR2=0.999;AF=0.197	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.201:0.799,0.201,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.982:0,0.018,0.982	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16190367	SNP-3.16189013.	C	A	.	PASS	AR2=1;DR2=1;AF=0.329	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16195500	SNP-3.16194146.	C	A	.	PASS	AR2=1;DR2=1;AF=0.356	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16196752	SNP-3.16195398.	C	A	.	PASS	AR2=0.97;DR2=0.974;AF=0.302	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:1.707:0.019,0.256,0.726	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.749:0.016,0.218,0.766	0|0:0:1,0,0	1|1:1.817:0.012,0.159,0.829	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.821:0.007,0.164,0.829	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.896:0.003,0.098,0.899	1|1:2:0,0,1	1|1:1.764:0.011,0.215,0.774	1|1:1.836:0.006,0.153,0.842	1|1:1.694:0.024,0.259,0.718	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:1.657:0.028,0.287,0.685	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:1.892:0.004,0.101,0.895	0|0:0:1,0,0	1|1:1.72:0.02,0.24,0.74	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.755:0.016,0.213,0.771	1|1:1.844:0.004,0.148,0.848	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.902:0.002,0.093,0.904	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.683:0.025,0.267,0.708	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.63:0.035,0.3,0.665	1|1:1.844:0.006,0.144,0.85	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.888:0.004,0.104,0.892	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.824:0.007,0.161,0.832	1|1:1.967:0,0.033,0.967	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.926:0.001,0.072,0.927	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.777:0.014,0.195,0.791	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.731:0.019,0.231,0.75	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.896:0.002,0.1,0.898	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.792:0.013,0.183,0.804	1|1:1.853:0.006,0.136,0.859	0|0:0:1,0,0	1|1:1.914:0.009,0.067,0.923	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.846:0.008,0.138,0.854	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.905:0.003,0.089,0.908	1|1:1.806:0.014,0.166,0.82	0|0:0:1,0,0	1|1:1.905:0.003,0.089,0.908	1|1:1.876:0.007,0.111,0.883	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:1.848:0.006,0.14,0.854	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16196939	SNP-3.16195585.	C	A	.	PASS	AR2=0.981;DR2=0.986;AF=0.31	GT:DS:GP	0|0:0:1,0,0	1|1:1.811:0.008,0.173,0.819	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.993:0,0.006,0.993	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.449:0.072,0.408,0.521	1|1:1.979:0,0.02,0.979	1|1:1.623:0.035,0.307,0.658	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:1.893:0,0.107,0.893	0|0:0:1,0,0	1|1:1.973:0,0.027,0.973	0|0:0.018:0.982,0.018,0	0|1:0.994:0.006,0.994,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.605:0.039,0.317,0.644	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.522:0.047,0.383,0.569	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.987:0,0.012,0.987	0|0:0:1,0,0	1|1:1.982:0,0.018,0.982	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.772:0.017,0.194,0.789	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.641:0.03,0.299,0.671	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.645:0.033,0.29,0.677	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.924:0.001,0.075,0.925	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.858:0.006,0.129,0.865	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.991:0,0.009,0.991	1|1:1.952:0.001,0.046,0.953	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.881:0.007,0.104,0.889	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.927:0.003,0.068,0.93	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16197579	SNP-3.16196225.	C	A	.	PASS	AR2=1;DR2=1;AF=0.337	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.935,0.064,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16197647	SNP-3.16196293.	C	A	.	PASS	AR2=0.977;DR2=0.981;AF=0.438	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.743:0.02,0.217,0.763	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1.222:0.041,0.696,0.263	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.878:0.003,0.116,0.881	0|0:0:1,0,0	1|1:1.9:0.001,0.097,0.902	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.906:0.234,0.627,0.14	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1.468:0.077,0.378,0.545	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.783:0.012,0.192,0.796	1|1:1.278:0.07,0.583,0.348	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.621:0.036,0.308,0.656	1|1:1.743:0.014,0.229,0.757	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.787:0.012,0.188,0.8	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.568:0.045,0.342,0.613	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.715:0.013,0.26,0.728	1|1:2:0,0,1	1|1:1.897:0.001,0.101,0.898	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.851:0.02,0.109,0.871	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1.081:0.239,0.44,0.32	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.943:0,0.057,0.943	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.918:0.003,0.077,0.921	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.975:0,0.024,0.975	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.944:0.002,0.052,0.946	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.857:0.005,0.132,0.863	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16199091	SNP-3.16197737.	A	G	.	PASS	AR2=1;DR2=1;AF=0.368	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16202379	SNP-3.16201026.	C	A	.	PASS	AR2=1;DR2=1;AF=0.381	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.026:0.975,0.024,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16202825	SNP-3.16201472.	A	G	.	PASS	AR2=0.904;DR2=0.92;AF=0.234	GT:DS:GP	1|1:1.947:0.001,0.051,0.948	0|0:0:1,0,0	1|1:1.793:0.016,0.175,0.809	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.241:0.782,0.195,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.153:0.853,0.141,0.006	0|0:0.075:0.927,0.07,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.151:0.855,0.139,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.104:0.899,0.097,0.003	0|0:0.118:0.886,0.111,0.003	0|0:0.066:0.937,0.06,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.115:0.889,0.108,0.004	0|0:0.072:0.93,0.067,0.002	0|0:0:1,0,0	0|1:1.348:0.04,0.572,0.388	0|0:0:1,0,0	0|0:0.149:0.856,0.138,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.167:0.84,0.153,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.148:0.852,0.147,0	0|0:0:1,0,0	0|0:0.132:0.872,0.124,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.264:0.76,0.216,0.024	1|1:2:0,0,1	0|0:0.132:0.869,0.129,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.961:0.001,0.038,0.962	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.091:0.909,0.09,0	0|0:0.273:0.75,0.226,0.023	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0.004:0.996,0.004,0	0|0:0.075:0.927,0.07,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.695:0.422,0.461,0.117	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.168:0.839,0.154,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.017,0	0|0:0.411:0.638,0.313,0.049	0|0:0:1,0,0	0|0:0.005:0.996,0.004,0	0|0:0.139:0.864,0.133,0.003	0|0:0.083:0.917,0.083,0	1|1:2:0,0,1	0|0:0.187:0.824,0.165,0.011	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.027:0.973,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.239:0.764,0.233,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0.017:0.983,0.017,0	1|1:2:0,0,1	0|0:0.121:0.879,0.121,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.203:0.798,0.202,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.768:0.38,0.472,0.148	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.399:0.643,0.315,0.042	1|1:2:0,0,1	0|0:0.05:0.953,0.044,0.003	1|0:0.861:0.318,0.503,0.179	0|1:0.717:0.413,0.457,0.13	0|0:0.379:0.652,0.316,0.031	0|0:0.093:0.908,0.091,0.001	0|0:0.718:0.412,0.458,0.13	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.953,0.044,0.003	0|0:0.118:0.887,0.107,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.98:0,0.019,0.981	0|0:0:1,0,0	0|0:0:1,0,0	0|0:1.175:0.21,0.405,0.385	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.717:0.413,0.457,0.13	0|0:0.097:0.906,0.092,0.003	0|0:0.321:0.706,0.267,0.027	0|0:0.139:0.866,0.129,0.005	0|0:0.333:0.695,0.277,0.028	0|0:0:1,0,0	0|0:0.095:0.908,0.088,0.003	0|0:0.145:0.861,0.134,0.005	0|0:0.12:0.884,0.113,0.003	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.096:0.907,0.09,0.003	0|0:0:1,0,0	0|0:0.1:0.903,0.094,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.141:0.864,0.132,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.083:0.918,0.08,0.001	0|0:0.453:0.598,0.352,0.051	0|0:0:1,0,0	0|1:0.697:0.391,0.52,0.088	0|0:0:1,0,0	0|0:0.178:0.83,0.162,0.008	1|1:2:0,0,1	0|0:0.306:0.711,0.273,0.016	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	1|0:0.459:0.565,0.41,0.025	0|0:0:1,0,0	0|0:0.315:0.704,0.277,0.019	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.955:0.001,0.044,0.956	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.946,0.052,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.305:0.719,0.258,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.962:0.001,0.036,0.963	0|0:0:1,0,0	0|0:0.207:0.802,0.19,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.717:0.413,0.457,0.13	1|0:0.717:0.413,0.457,0.13	0|0:0.172:0.843,0.142,0.015	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16203548	SNP-3.16202195.	A	G	.	PASS	AR2=0.996;DR2=0.997;AF=0.328	GT:DS:GP	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.954:0.001,0.044,0.955	0|0:0:1,0,0	1|1:1.941:0.001,0.058,0.942	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.964:0.001,0.035,0.964	0|1:1:0,1,0	0|0:0.039:0.962,0.037,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.449:0.551,0.448,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.94:0.001,0.058,0.941	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.03:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.97:0.001,0.028,0.971	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.934,0.065,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16204694	SNP-3.16203341.	C	A	.	PASS	AR2=0.929;DR2=0.95;AF=0.424	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.532:0.542,0.384,0.074	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.543:0.55,0.358,0.092	1|1:2:0,0,1	1|0:0.679:0.437,0.446,0.117	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.589:0.496,0.419,0.085	1|1:2:0,0,1	0|1:0.874:0.288,0.55,0.162	1|1:2:0,0,1	0|0:0.468:0.6,0.331,0.068	0|0:0:1,0,0	0|1:0.552:0.531,0.387,0.082	0|0:0.785:0.48,0.254,0.266	1|0:0.8:0.356,0.489,0.155	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.396:0.688,0.228,0.084	0|0:0.059:0.945,0.051,0.004	0|0:0:1,0,0	0|0:0.08:0.922,0.076,0.002	0|0:0:1,0,0	0|0:0.069:0.933,0.066,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.207:0.801,0.192,0.008	0|0:0.014:0.986,0.014,0	0|0:0.093:0.909,0.089,0.002	0|0:0:1,0,0	0|0:0.11:0.893,0.104,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.568:0.511,0.41,0.079	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.075:0.926,0.072,0.001	0|0:0.649:0.569,0.213,0.218	1|1:2:0,0,1	0|0:0.093:0.909,0.088,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0.085:0.917,0.081,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.082:0.92,0.079,0.002	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.146:0.858,0.138,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.599:0.489,0.423,0.088	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.967:0.001,0.032,0.968	1|1:1.975:0,0.025,0.975	1|1:1.96:0,0.04,0.96	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.072:0.933,0.063,0.005	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.947:0.001,0.052,0.948	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	0|0:0.096:0.904,0.096,0	0|0:0:1,0,0	1|1:1.94:0.001,0.057,0.941	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.329:0.685,0.3,0.015	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.151:0.857,0.134,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.515:0.555,0.376,0.07	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.97:0,0.029,0.97	0|0:0.565:0.524,0.388,0.088	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.931:0.001,0.067,0.932	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.017:0.984,0.016,0	0|0:0.093:0.909,0.088,0.002	0|0:0.12:0.884,0.113,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.667:0.446,0.44,0.113	0|1:0.683:0.419,0.478,0.103	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.524:0.549,0.377,0.073	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.9:0.001,0.099,0.901	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.722:0.001,0.277,0.722	0|0:0.354:0.693,0.26,0.047	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.12:0.888,0.104,0.008	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.136:0.873,0.119,0.009	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.472:0.588,0.351,0.06	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.484:0.579,0.358,0.063	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.062:0.939,0.06,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16204817	SNP-3.16203464.	C	A	.	PASS	AR2=0.926;DR2=0.945;AF=0.274	GT:DS:GP	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.555:0.051,0.344,0.605	0|0:0:1,0,0	1|1:1.45:0.076,0.399,0.525	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.512:0.059,0.369,0.572	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.5:0.076,0.349,0.576	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.501:0.031,0.437,0.532	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.637:0.034,0.295,0.671	0|1:1.205:0.156,0.482,0.361	1|1:1.674:0.029,0.269,0.703	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1.259:0.124,0.492,0.383	1|1:1.549:0.052,0.347,0.601	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.696:0.029,0.246,0.725	1|0:1:0,1,0	0|1:1.313:0.111,0.465,0.424	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.692:0.027,0.254,0.719	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.639:0.03,0.302,0.668	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.594:0.04,0.326,0.634	1|0:1:0,1,0	0|1:1.437:0.083,0.398,0.519	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.394:0.125,0.356,0.519	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.228:0.116,0.541,0.344	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.514:0.056,0.374,0.57	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.612:0.033,0.321,0.646	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.158:0.861,0.12,0.019	0|0:0:1,0,0	0|0:0.048:0.952,0.048,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.513:0.071,0.344,0.584	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.581:0.128,0.164,0.709	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.662:0.03,0.277,0.692	1|1:1.637:0.034,0.295,0.671	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.914:0.004,0.077,0.918	1|1:1.859:0.008,0.125,0.867	0|0:0:1,0,0	1|1:1.575:0.036,0.353,0.611	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.863:0.006,0.125,0.869	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16205976	SNP-3.16204623.	A	G	.	PASS	AR2=0.981;DR2=0.985;AF=0.215	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.629:0.372,0.627,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.032:0.968,0.031,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:0.812:0.191,0.807,0.002	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.171:0.835,0.16,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.156:0.847,0.149,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.356:0.661,0.323,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.139:0.869,0.123,0.008	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.948,0.052,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.208:0.818,0.156,0.026	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.091:0.911,0.086,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.961,0.038,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.422:0.647,0.285,0.068	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.129:0.881,0.108,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0.132:0.874,0.121,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16207401	SNP-3.16206048.	C	A	.	PASS	AR2=1;DR2=1;AF=0.342	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16208608	SNP-3.16207255.	A	G	.	PASS	AR2=0.991;DR2=0.992;AF=0.289	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.827:0.287,0.6,0.113	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.621:0.455,0.47,0.076	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.002:0.128,0.741,0.13	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:0.965:0.273,0.488,0.238	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0
+3	16210681	SNP-3.16209328.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.212	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.879:0,0.121,0.879	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.998:0.018,0.965,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16211192	SNP-3.16209839.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.352	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.949:0,0.05,0.95	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.078:0.924,0.075,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16211757	SNP-3.16210404.	A	G	.	PASS	AR2=0.984;DR2=0.984;AF=0.466	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.96:0.272,0.496,0.232	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:0.96:0.272,0.496,0.232	1|1:2:0,0,1	1|1:0.96:0.272,0.496,0.232	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:0.96:0.272,0.496,0.232	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.96:0.272,0.496,0.232	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.96:0.272,0.496,0.232	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.96:0.272,0.496,0.232	1|0:0.96:0.272,0.496,0.232	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16212460	SNP-3.16211107.	C	A	.	PASS	AR2=0.985;DR2=0.989;AF=0.304	GT:DS:GP	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.641:0,0.358,0.642	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.884:0.012,0.092,0.896	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:0.986:0.054,0.907,0.04	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.945:0.001,0.052,0.947	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.836:0,0.163,0.836	1|1:2:0,0,1	1|0:1.397:0.078,0.447,0.475	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.515:0.057,0.371,0.572	0|0:0:1,0,0	1|1:1.842:0.002,0.154,0.844	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.937:0.001,0.061,0.938	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.977:0.043,0.937,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.242:0.168,0.421,0.411	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0
+3	16212633	SNP-3.16211280.	A	G	.	PASS	AR2=0.996;DR2=0.997;AF=0.433	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.647:0,0.353,0.647	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.036:0.965,0.035,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.02:0.98,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.122:0.878,0.122,0	1|1:1.903:0.001,0.095,0.904	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.947:0.001,0.052,0.947	1|1:2:0,0,1	1|0:0.872:0.129,0.871,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.98:0,0.019,0.98	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.961:0,0.038,0.962	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.939:0.001,0.059,0.94	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.983:0,0.016,0.984	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16214847	SNP-3.16213494.	A	G	.	PASS	AR2=0.968;DR2=0.976;AF=0.325	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.979:0,0.021,0.979	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.062:0.938,0.062,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.836:0.007,0.151,0.843	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.856:0.005,0.134,0.861	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0.398:0.635,0.332,0.033	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.588:0.5,0.412,0.088	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.881:0.003,0.113,0.884	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.96:0.285,0.469,0.245	1|1:1.835:0.007,0.152,0.841	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	1|1:1.673:0.035,0.258,0.708	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.704:0.026,0.245,0.729	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.735:0.024,0.217,0.759	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.704:0.026,0.245,0.729	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.602:0.413,0.571,0.015	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.324:0.154,0.368,0.478	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.724:0.024,0.228,0.748	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.826:0.008,0.158,0.834	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0.514:0.493,0.501,0.007	0|0:0.006:0.994,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.047:0.102,0.748,0.15	1|1:2:0,0,1	1|1:1.877:0.003,0.116,0.88	0|0:0:1,0,0	0|0:0.047:0.956,0.041,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.62:0.043,0.294,0.663	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16216727	SNP-3.16215374.	A	G	.	PASS	AR2=1;DR2=1;AF=0.284	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.966:0,0.034,0.966	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16216860	SNP-3.16215507.	A	G	.	PASS	AR2=0.997;DR2=0.998;AF=0.273	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.929:0,0.07,0.93	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.416:0.584,0.416,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.906:0.001,0.092,0.907	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16221494	SNP-3.16220141.	A	G	.	PASS	AR2=0.994;DR2=0.995;AF=0.278	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.126:0.876,0.121,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.096:0.904,0.096,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.051:0.95,0.049,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.943:0.002,0.053,0.945	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.974:0,0.025,0.975	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.05,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.942,0.057,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.1:0.9,0.1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.479:0.549,0.423,0.028	0|0:0:1,0,0	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.943,0.056,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.95,0.049,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16221513	SNP-3.16220160.	A	G	.	PASS	AR2=0.868;DR2=0.914;AF=0.241	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.548:0.54,0.371,0.088	0|0:0.151:0.856,0.136,0.008	0|0:0.011:0.989,0.011,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.486:0.578,0.359,0.064	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.602:0.488,0.421,0.09	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.638:0.464,0.433,0.102	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.623:0.474,0.428,0.097	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.285:0.715,0.285,0	0|0:0.542:0.537,0.384,0.079	1|1:2:0,0,1	0|0:0.755:0.384,0.477,0.139	0|0:0.497:0.572,0.359,0.069	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.252:0.153,0.441,0.405	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.591:0.496,0.417,0.087	0|1:0.622:0.475,0.428,0.097	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.823:0.335,0.507,0.158	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.197:0.004,0.796,0.201	0|0:0.18:0.82,0.18,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.585:0.5,0.416,0.085	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.366:0.653,0.328,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.587:0.498,0.416,0.086	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.284:0.772,0.171,0.056	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.629:0.47,0.431,0.099	0|0:0:1,0,0	0|0:0.476:0.574,0.376,0.05	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.262:0.149,0.44,0.411	0|0:0:1,0,0	0|0:0.589:0.497,0.417,0.086	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.875:0.287,0.551,0.162	0|0:0.623:0.474,0.428,0.097	0|0:0.59:0.496,0.417,0.087	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.623:0.474,0.428,0.097	0|0:0.826:0.375,0.424,0.201	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.966:0.034,0.966,0	0|0:0.616:0.479,0.426,0.095	0|0:0.588:0.498,0.416,0.086	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.436:0.121,0.322,0.557	0|0:0.112:0.896,0.096,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.582:0.502,0.414,0.084	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.811:0.031,0.127,0.842	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.495:0.572,0.362,0.067	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.541:0.533,0.394,0.073	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.623:0.474,0.428,0.097
+3	16222648	SNP-3.16221295.	A	G	.	PASS	AR2=1;DR2=1;AF=0.311	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16225523	SNP-3.16224170.	A	G	.	PASS	AR2=0.997;DR2=0.998;AF=0.289	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.418:0.582,0.418,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.938,0.06,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.105:0.9,0.094,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1
+3	16227575	SNP-3.16226222.	A	G	.	PASS	AR2=0.981;DR2=0.984;AF=0.265	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.869:0.005,0.12,0.874	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.96,0.04,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.207:0.793,0.206,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.922:0.003,0.073,0.925	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.74:0.017,0.226,0.757	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.917:0.003,0.076,0.92	1|0:0.872:0.13,0.868,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.744:0.015,0.225,0.759	1|1:1.74:0.017,0.226,0.757	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.769:0.013,0.205,0.782	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.74:0.017,0.226,0.757	0|0:0:1,0,0	0|1:0.894:0.106,0.894,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.929:0.001,0.068,0.93	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.745:0.017,0.222,0.761	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.987:0,0.012,0.988	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.74:0.017,0.226,0.757	1|1:1.931:0.002,0.065,0.933	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.785:0.015,0.186,0.799	1|1:1.74:0.017,0.226,0.757	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.95:0.001,0.047,0.952	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.911:0.005,0.079,0.916	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.929:0.002,0.068,0.93	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1
+3	16228073	SNP-3.16226720.	A	G	.	PASS	AR2=0.997;DR2=0.997;AF=0.282	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.028,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.911:0,0.089,0.911	0|0:0:1,0,0	0|0:0.067:0.934,0.065,0.001	0|0:0.032:0.969,0.031,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.994:0.006,0.994,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0.074:0.927,0.073,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.053:0.947,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.962,0.037,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.814:0,0.186,0.814	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.046:0.955,0.044,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16241227	SNP-3.16239874.	C	A	.	PASS	AR2=0.991;DR2=0.993;AF=0.317	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.958:0,0.041,0.958	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.747:0.013,0.227,0.76	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.794:0.011,0.184,0.805	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.762:0.01,0.219,0.771	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.962:0,0.038,0.962	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.999:0.001,0.999,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.877:0.004,0.116,0.88	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.896:0.003,0.098,0.899	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.654:0.024,0.299,0.678	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.897:0,0.103,0.897	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.777:0.01,0.203,0.787	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.967:0,0.033,0.967	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.944:0,0.055,0.945	0|0:0:1,0,0
+3	16244812	SNP-3.16243459.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.338	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.941:0.059,0.941,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.885:0.317,0.48,0.203	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.978:0.023,0.976,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.895:0.001,0.104,0.896	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.772:0.016,0.196,0.788	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.197:0.833,0.137,0.03	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16246646	SNP-3.16245293.	C	A	.	PASS	AR2=0.921;DR2=0.937;AF=0.198	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.974,0.026,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.323:0.681,0.315,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.014,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.027:0.974,0.025,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.069:0.931,0.068,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.216:0.797,0.191,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.938,0.06,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.238:0.774,0.214,0.012	0|0:0.105:0.898,0.099,0.003	0|0:0:1,0,0	0|0:0.316:0.723,0.238,0.039	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.222:0.792,0.194,0.014	0|0:0:1,0,0	0|0:0.303:0.711,0.275,0.014	0|0:0.15:0.853,0.144,0.003	0|0:0:1,0,0	0|0:0.075:0.927,0.07,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.171:0.841,0.147,0.012	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.155:0.851,0.144,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	1|0:0.554:0.466,0.514,0.02	0|0:0.152:0.851,0.145,0.003	0|0:0:1,0,0	1|1:1.42:0.078,0.424,0.498	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.63:0.382,0.605,0.012	1|1:0.866:0.335,0.464,0.201	0|0:0:1,0,0	0|0:0.262:0.742,0.254,0.004	0|0:0.239:0.788,0.185,0.027	0|0:0.68:0.408,0.504,0.088	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.503:0.065,0.367,0.568	0|0:0:1,0,0	0|0:0.029:0.972,0.027,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.21:0.798,0.194,0.008	1|0:1.34:0.102,0.456,0.442	0|0:0.019:0.981,0.018,0	1|1:1.554:0.05,0.346,0.604	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.146:0.86,0.135,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.027:0.974,0.026,0.001	0|0:0:1,0,0	0|0:0.05:0.951,0.049,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.124:0.878,0.119,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.959,0.039,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.17:0.838,0.154,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.137:0.874,0.116,0.011	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.672:0.423,0.481,0.096	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.536:0.054,0.357,0.59	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	1|1:2:0,0,1	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.031:0.97,0.029,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.316:0.736,0.211,0.053	0|0:0.305:0.722,0.251,0.027	0|0:0.175:0.834,0.158,0.008	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.135:0.876,0.112,0.011	0|0:0.055:0.947,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.913:0.344,0.398,0.258	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.723:0.407,0.464,0.129	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.944,0.055,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16248317	SNP-3.16246964.	A	G	.	PASS	AR2=0.988;DR2=0.99;AF=0.274	GT:DS:GP	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.825:0.009,0.156,0.834	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.085:0.917,0.082,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.92,0.079,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.636:0.034,0.296,0.67	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.099:0.903,0.094,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.005:0.995,0.005,0	1|1:1.985:0,0.014,0.985	1|0:0.997:0.01,0.982,0.007	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.941:0.059,0.941,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.227:0.773,0.227,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.642:0.033,0.292,0.675	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.11:0.893,0.104,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.965,0.035,0	0|0:0.11:0.893,0.104,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.837:0.01,0.142,0.848	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.945,0.05,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.945,0.05,0.004	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16248339	SNP-3.16246986.	A	G	.	PASS	AR2=0.997;DR2=0.998;AF=0.279	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:1.766:0,0.234,0.766	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.989:0,0.011,0.989	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:1.999:0,0.001,0.999	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	1|0:0.999:0.001,0.999,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0.001,0.997,0.001	1|0:1.001:0.001,0.998,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.864:0,0.136,0.864	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.923:0.077,0.923,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.006,0.994	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16249091	SNP-3.16247738.	A	G	.	PASS	AR2=1;DR2=1;AF=0.294	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.956,0.043,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16249376	SNP-3.16248023.	A	G	.	PASS	AR2=0.884;DR2=0.923;AF=0.368	GT:DS:GP	0|0:0.021:0.98,0.02,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.407:0.626,0.342,0.032	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.235:0.765,0.234,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.342:0.677,0.304,0.019	1|1:2:0,0,1	0|1:0.842:0.238,0.682,0.08	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.177:0.105,0.612,0.282	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.714:0.414,0.458,0.128	1|1:2:0,0,1	1|0:0.688:0.432,0.447,0.12	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.745:0.385,0.486,0.129	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.644:0.46,0.436,0.104	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.644:0.46,0.436,0.104	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.354:0.026,0.594,0.38	0|0:0.688:0.432,0.447,0.12	0|1:0.538:0.555,0.353,0.092	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.701:0.422,0.455,0.123	0|0:0:1,0,0	1|0:1.546:0.026,0.402,0.572	0|0:0:1,0,0	0|0:0.388:0.629,0.354,0.017	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.164:0.251,0.333,0.415	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.718:0.284,0.715,0.002	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.381:0.658,0.302,0.04	0|0:0.067:0.934,0.066,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.645:0.449,0.457,0.094	0|0:0:1,0,0	0|1:0.644:0.462,0.432,0.106	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.613:0.483,0.421,0.096	0|0:0.453:0.547,0.453,0	0|0:0:1,0,0	1|0:0.575:0.51,0.405,0.085	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.549:0.529,0.392,0.079	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.712:0.416,0.456,0.128	0|0:0.171:0.83,0.17,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.378:0.67,0.281,0.048	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.645:0.459,0.436,0.104	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.575:0.51,0.405,0.085	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.743:0.397,0.463,0.14	0|0:0:1,0,0	1|0:0.644:0.46,0.436,0.104	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.01:0.219,0.551,0.23	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.549:0.529,0.392,0.079	0|1:1.406:0.082,0.43,0.488	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.774:0.311,0.604,0.085	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.165:0.251,0.333,0.416	0|1:0.645:0.459,0.436,0.104	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.769:0.032,0.167,0.801	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.745:0.396,0.464,0.141	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.937:0.002,0.06,0.939	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.654:0.454,0.437,0.108	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.549:0.529,0.392,0.079	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.668:0.445,0.442,0.113	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16249805	SNP-3.16248452.	A	G	.	PASS	AR2=0.991;DR2=0.992;AF=0.215	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.138:0.869,0.124,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.102:0.901,0.097,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.993,0.007,0	0|0:0.051:0.949,0.05,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.939,0.061,0	0|0:0.018:0.983,0.017,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0.037:0.964,0.036,0.001	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0.04:0.961,0.039,0.001	1|1:2:0,0,1	0|0:0.087:0.914,0.085,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.988,0.012,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.285:0.736,0.243,0.021	0|0:0.21:0.79,0.21,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.094:0.907,0.093,0	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.951,0.048,0.001	0|0:0.013:0.988,0.012,0	0|0:0.013:0.987,0.012,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.056:0.946,0.053,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.988,0.012,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.039:0.962,0.037,0.001	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16249928	SNP-3.16248575.	C	A	.	PASS	AR2=1;DR2=1;AF=0.321	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:1.965:0,0.034,0.966	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16250175	SNP-3.16248822.	A	G	.	PASS	AR2=0.961;DR2=0.972;AF=0.238	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.05:0.951,0.047,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.052:0.949,0.051,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.191:0.81,0.189,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.82:0.279,0.622,0.099	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.029:0.971,0.028,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.216:0.804,0.177,0.019	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.374:0.66,0.305,0.034	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.868:0.254,0.624,0.122	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.958,0.041,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.029:0.972,0.028,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.421:0.628,0.323,0.049	0|0:0:1,0,0	0|0:0.848:0.504,0.145,0.352	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.339:0.69,0.281,0.029	0|0:0.08:0.921,0.078,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.035:0.965,0.034,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.072:0.93,0.069,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.315:0.711,0.262,0.026	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.018:0.982,0.017,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.941:0.001,0.057,0.942	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.369:0.666,0.3,0.034	0|0:0.349:0.682,0.286,0.031	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.332:0.696,0.276,0.028	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.369:0.666,0.3,0.034
+3	16250281	SNP-3.16248928.	C	A	.	PASS	AR2=0.983;DR2=0.985;AF=0.323	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.9:0.001,0.098,0.901	0|0:0:1,0,0	1|1:1.802:0.01,0.177,0.812	1|1:1.948:0.002,0.047,0.951	0|0:0.047:0.953,0.047,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.077:0.924,0.075,0.001	0|0:0:1,0,0	0|0:0.065:0.936,0.063,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.099:0.904,0.094,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.975:0.038,0.95,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.091:0.91,0.088,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.109:0.896,0.1,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.293:0.716,0.274,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0.077:0.923,0.076,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.886:0.003,0.109,0.888	1|1:1.869:0.005,0.12,0.874	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.998:0.002,0.998,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.171:0.841,0.147,0.012	1|1:1.97:0,0.03,0.97	0|0:0:1,0,0	1|1:1.929:0.001,0.07,0.929	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.828:0.008,0.156,0.836	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.074:0.927,0.072,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.121:0.885,0.11,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.947:0.003,0.048,0.949	0|0:0:1,0,0	0|0:0.121:0.884,0.111,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.871:0.005,0.119,0.876	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.914:0.003,0.08,0.917	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.815:0.012,0.161,0.827	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.852:0.006,0.137,0.857	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.931:0.002,0.064,0.934	1|1:1.816:0.008,0.168,0.824	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.089:0.913,0.086,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.121:0.884,0.111,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.971:0,0.029,0.971	0|0:0:1,0,0	0|0:0.11:0.902,0.085,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.931:0,0.069,0.931	0|0:0:1,0,0
+3	16251439	SNP-3.16250086.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.496	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.013,0.987	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.063:0.937,0.063,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.879:0.007,0.108,0.885	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.972:0,0.028,0.972	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.937:0.001,0.061,0.938	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0
+3	16252381	SNP-3.16251028.	C	A	.	PASS	AR2=0.989;DR2=0.991;AF=0.266	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.195:0.071,0.663,0.266	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:0.995:0.005,0.995,0	0|0:0:1,0,0	1|1:1.983:0,0.017,0.983	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.868:0.001,0.13,0.869	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.59:0.047,0.315,0.637	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.665:0.029,0.278,0.694	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.734:0.02,0.227,0.754	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.805:0.008,0.179,0.813	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.895:0.005,0.094,0.901	0|0:0:1,0,0
+3	16253135	SNP-3.16251782.	C	A	.	PASS	AR2=0.94;DR2=0.957;AF=0.334	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.831:0.013,0.142,0.844	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.676:0.035,0.254,0.711	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.315:0.111,0.463,0.426	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.438:0.092,0.378,0.53	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|1:0.595:0.406,0.592,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0.094:0.907,0.092,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.41:0.079,0.432,0.489	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.12:0.116,0.648,0.236	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.529:0.053,0.364,0.583	1|1:1.487:0.065,0.383,0.552	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.683:0.004,0.31,0.687	1|1:1.898:0,0.102,0.898	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.984:0.016,0.984,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.851:0.001,0.146,0.853	0|0:0:1,0,0	0|1:1.503:0.031,0.434,0.535	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.331:0.108,0.452,0.44	1|1:1.51:0.039,0.412,0.549	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.018:0.982,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.975:0.001,0.024,0.976	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.796:0.024,0.155,0.82	1|1:1.572:0.055,0.317,0.628	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	1|1:1.399:0.088,0.425,0.487	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.652:0.024,0.3,0.676	1|1:1.904:0.008,0.081,0.912	1|1:2:0,0,1	1|1:1.777:0.025,0.174,0.801	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.228:0.805,0.161,0.034	1|0:1.358:0.046,0.55,0.404	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.976:0.001,0.023,0.976	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.931:0.003,0.062,0.934	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:1.936:0.001,0.061,0.938	0|0:0:1,0,0	1|1:1.978:0.001,0.021,0.978	1|1:2:0,0,1	0|0:0.283:0.817,0.083,0.1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.283:0.817,0.083,0.1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.304:0.141,0.414,0.445	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.97,0.03,0.001	1|1:1.526:0.079,0.316,0.605	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.907:0.005,0.083,0.912	1|1:1.901:0.009,0.081,0.91	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.696:0.002,0.3,0.698	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.87:0.001,0.127,0.871	0|0:0:1,0,0
+3	16255263	SNP-3.16253910.	A	G	.	PASS	AR2=0.975;DR2=0.982;AF=0.25	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.496:0.068,0.367,0.565	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.638:0.033,0.295,0.671	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.684:0.026,0.264,0.71	1|1:1.576:0.051,0.321,0.627	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.678:0.029,0.264,0.707	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.983:0.017,0.983,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.115:0.885,0.115,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.964:0.001,0.035,0.964	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.638:0.033,0.296,0.671	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.735:0.025,0.215,0.76	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.693:0.027,0.254,0.719	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.648:0.033,0.285,0.682	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.697:0.028,0.247,0.725	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16257142	SNP-3.16255789.	A	G	.	PASS	AR2=1;DR2=1;AF=0.296	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.027,0.973	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16258144	SNP-3.16256791.	C	A	.	PASS	AR2=0.997;DR2=0.997;AF=0.373	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.093:0.913,0.082,0.006	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.033:0.967,0.032,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.17:0.845,0.14,0.015	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.01:0.99,0.01,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.105:0.907,0.082,0.012	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	1|0:1.02:0.028,0.925,0.047	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.968,0.032,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16258485	SNP-3.16257132.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.367	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.842:0.006,0.145,0.848	1|1:2:0,0,1	0|0:0.162:0.852,0.134,0.014	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.842:0.006,0.145,0.848	1|1:2:0,0,1	1|1:1.79:0.009,0.191,0.799	1|1:1.891:0.004,0.1,0.895	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.789:0.011,0.188,0.8	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.093:0.916,0.075,0.009	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.996:0.046,0.913,0.042	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.97,0.029,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16258806	SNP-3.16257453.	A	G	.	PASS	AR2=0.996;DR2=0.997;AF=0.232	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.733:0.005,0.256,0.738	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.948:0.003,0.046,0.951	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.76:0.014,0.211,0.775	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16258883	SNP-3.16257530.	A	G	.	PASS	AR2=0.981;DR2=0.985;AF=0.363	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.314:0.71,0.265,0.025	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.951:0.002,0.045,0.953	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.771:0.017,0.194,0.788	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.613:0.051,0.284,0.664	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.951:0.002,0.045,0.953	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.082:0.918,0.081,0.001	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.419:0.585,0.411,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.835:0.008,0.149,0.843	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.887:0.006,0.1,0.893	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.859:0.014,0.113,0.873	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.049:0.206,0.54,0.255	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.354:0.677,0.291,0.031	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.641:0.03,0.298,0.672	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.242:0.777,0.205,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.952:0.002,0.043,0.955	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.837:0.008,0.147,0.845	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.839:0.022,0.118,0.86	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0
+3	16259008	SNP-3.16257655.	A	G	.	PASS	AR2=0.894;DR2=0.921;AF=0.236	GT:DS:GP	0|1:0.973:0.263,0.501,0.236	0|0:0.042:0.96,0.038,0.002	0|0:0.948:0.344,0.365,0.292	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.376:0.123,0.379,0.499	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.712:0.408,0.473,0.12	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.664:0.476,0.384,0.14	0|0:0:1,0,0	1|1:1.622:0.036,0.306,0.658	0|0:0:1,0,0	1|1:1.739:0.018,0.225,0.757	0|1:0.781:0.38,0.46,0.161	0|0:0.865:0.371,0.393,0.236	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.643:0.031,0.296,0.673	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0.768:0.393,0.446,0.161	0|0:0.102:0.901,0.096,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.707:0.023,0.248,0.729	0|0:0.092:0.912,0.085,0.003	0|0:0.599:0.494,0.413,0.093	0|0:0.144:0.859,0.138,0.003	0|0:0.072:0.93,0.069,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.147:0.855,0.142,0.003	0|0:0.198:0.812,0.178,0.01	0|0:0:1,0,0	0|0:0.483:0.552,0.414,0.035	1|1:2:0,0,1	0|0:0.423:0.612,0.353,0.035	0|0:0.136:0.869,0.126,0.005	0|0:0.442:0.581,0.396,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.578:0.495,0.432,0.073	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.025,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:1.195:0.171,0.464,0.366	0|0:0:1,0,0	0|0:1.198:0.234,0.335,0.431	0|1:0.992:0.277,0.455,0.269	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.956,0.041,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.695:0.422,0.461,0.117	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.678:0.026,0.269,0.705	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.291:0.726,0.257,0.017	0|0:0.657:0.45,0.444,0.107	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.61:0.048,0.295,0.657	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.279:0.752,0.217,0.031	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.021:0.979,0.021,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.14:0.865,0.13,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.567:0.527,0.379,0.094	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.755:0.017,0.211,0.772	0|0:0:1,0,0	1|1:1.61:0.073,0.243,0.684	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.38:0.657,0.306,0.037	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.844:0.341,0.475,0.184	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.102:0.902,0.095,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16260428	SNP-3.16259075.	A	G	.	PASS	AR2=0.981;DR2=0.985;AF=0.473	GT:DS:GP	0|0:0.507:0.643,0.208,0.15	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.03:0.971,0.028,0.001	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.263:0.746,0.244,0.009	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.948,0.051,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.144:0.863,0.13,0.007	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.081:0.919,0.081,0	1|1:1.856:0.001,0.141,0.857	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.794:0.335,0.536,0.129	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:0.727:0.379,0.515,0.106	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.973,0.027,0	0|0:0:1,0,0	0|0:0.066:0.936,0.062,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.017:0,0.983,0.017	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0.277:0.732,0.259,0.009	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.249:0.764,0.223,0.013	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.152:0.852,0.144,0.004	1|1:1.961:0,0.039,0.961	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.11:0.894,0.102,0.004	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.931,0.068,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0.279:0.751,0.218,0.03	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.077:0.928,0.067,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.396:0.622,0.359,0.019	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.058:0.943,0.057,0	1|1:2:0,0,1
+3	16260660	SNP-3.16259307.	A	G	.	PASS	AR2=0.995;DR2=0.995;AF=0.286	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.957,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.949,0.05,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:1.956:0.001,0.043,0.956	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.967:0,0.032,0.967	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.962:0,0.037,0.963	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.972:0,0.027,0.973	1|1:2:0,0,1	1|1:1.933:0.001,0.065,0.934	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.068:0.933,0.066,0.001	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.955:0.001,0.043,0.956	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:1.958:0,0.042,0.958	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.932,0.067,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.933,0.066,0.001	0|0:0.067:0.934,0.065,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.946:0.001,0.052,0.947	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.933,0.066,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.957:0.001,0.042,0.957	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.962:0.001,0.037,0.963	1|1:1.962:0.001,0.036,0.963	0|0:0:1,0,0	1|1:2:0,0,1
+3	16263079	SNP-3.16261725.	A	G	.	PASS	AR2=0.995;DR2=0.996;AF=0.269	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.768:0.018,0.197,0.785	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.048:0.952,0.047,0.001	0|0:0:1,0,0	0|0:0.05:0.95,0.049,0.001	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.418:0.585,0.412,0.003	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.884:0.006,0.104,0.89	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.95,0.049,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16264069	SNP-3.16262715.	C	A	.	PASS	AR2=0.991;DR2=0.994;AF=0.418	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.883:0.005,0.107,0.888	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.028:0.972,0.028,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.626:0.071,0.231,0.697	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.946,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.637:0.005,0.352,0.643	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.975:0,0.025,0.975	0|0:0.02:0.98,0.019,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.028,0.972	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.961,0.038,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.428:0.088,0.395,0.517	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16266636	SNP-3.16265282.	C	A	.	PASS	AR2=1;DR2=1;AF=0.448	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.031:0.969,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16268544	SNP-3.16267190.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.444	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.253:0.748,0.252,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16269971	SNP-3.16268617.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.418	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.927:0.001,0.07,0.929	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.961:0,0.039,0.961	1|1:1.94:0.001,0.058,0.941	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.94:0.001,0.058,0.941	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.932:0.001,0.066,0.933	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16270468	SNP-3.16269114.	A	G	.	PASS	AR2=0.997;DR2=0.997;AF=0.287	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.841:0.006,0.146,0.848	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.969:0,0.031,0.969	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.956:0.001,0.043,0.956	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.953:0.001,0.046,0.954	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.971:0,0.029,0.971	0|0:0:1,0,0	1|1:1.952:0.001,0.046,0.953	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.841:0.006,0.146,0.848	1|1:1.957:0.001,0.042,0.958	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16271615	SNP-3.16270261.	C	A	.	PASS	AR2=0.998;DR2=0.999;AF=0.431	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.023:0.977,0.022,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.561:0.462,0.516,0.022	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16275105	SNP-3.16273751.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.312	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.788:0.013,0.186,0.801	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.535:0.005,0.455,0.54	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.189:0.811,0.189,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16275267	SNP-3.16273913.	C	A	.	PASS	AR2=1;DR2=1;AF=0.444	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16276606	SNP-3.16275252.	C	A	.	PASS	AR2=0.969;DR2=0.976;AF=0.352	GT:DS:GP	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.22:0.017,0.747,0.236	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.612:0.033,0.323,0.644	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.693:0.023,0.261,0.716	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.309:0.062,0.566,0.371	1|1:1.902:0.004,0.09,0.906	1|1:1.805:0.013,0.169,0.818	1|1:1.841:0.005,0.15,0.846	1|1:1.928:0.002,0.068,0.93	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.51:0.051,0.387,0.562	0|0:0:1,0,0	1|1:1.869:0.006,0.119,0.875	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.878:0.006,0.111,0.883	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.978:0.001,0.021,0.978	0|1:0.657:0.437,0.469,0.094	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.613:0.038,0.31,0.652	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.817:0.002,0.179,0.819	1|1:1.92:0,0.08,0.92	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.708:0.034,0.223,0.743	0|0:0:1,0,0	1|1:1.952:0.001,0.046,0.953	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.751:0.016,0.216,0.767	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.881:0.003,0.114,0.883	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1.141:0.128,0.602,0.269	0|0:0:1,0,0	1|1:1.742:0.023,0.213,0.764	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.899:0.004,0.093,0.903	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.924:0.002,0.073,0.925	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.726:0.021,0.233,0.747	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.602:0.006,0.386,0.608	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16277496	SNP-3.16276142.	A	G	.	PASS	AR2=1;DR2=1;AF=0.247	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16278608	SNP-3.16277254.	C	A	.	PASS	AR2=0.997;DR2=0.998;AF=0.44	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.803:0.01,0.178,0.813	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.607:0.049,0.296,0.656	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16279097	SNP-3.16277743.	A	G	.	PASS	AR2=0.915;DR2=0.94;AF=0.442	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.745:0.007,0.241,0.752	1|1:1.543:0.051,0.355,0.594	0|0:0.25:0.759,0.232,0.009	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.521:0.06,0.359,0.581	0|1:0.847:0.272,0.61,0.119	1|1:1.895:0.004,0.096,0.899	1|1:1.524:0.034,0.409,0.557	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.522:0.059,0.36,0.581	1|1:2:0,0,1	1|1:1.626:0.035,0.303,0.662	1|1:1.952:0.001,0.046,0.953	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.972:0,0.028,0.972	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.003:0.285,0.427,0.288	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.075:0.23,0.465,0.305	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.512:0.595,0.299,0.106	1|1:2:0,0,1	1|1:1.593:0.051,0.305,0.644	1|1:1.58:0.051,0.318,0.631	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.049:0.179,0.594,0.228	1|1:1.531:0.058,0.354,0.588	1|1:2:0,0,1	1|0:1.289:0.177,0.357,0.466	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.93:0.259,0.553,0.188	1|1:2:0,0,1	0|0:0.318:0.712,0.259,0.03	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.413:0.069,0.448,0.483	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.435:0.081,0.403,0.516	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.428:0.078,0.416,0.506	1|1:1.26:0.117,0.505,0.378	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.693:0.033,0.24,0.727	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.783:0.237,0.743,0.02	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.345:0.143,0.368,0.489	0|0:0:1,0,0	1|1:1.386:0.13,0.353,0.516	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.495:0.065,0.375,0.56	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.503:0.066,0.365,0.569	0|0:0.373:0.677,0.274,0.049	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.527:0.058,0.357,0.585	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.395:0.095,0.414,0.49	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.521:0.06,0.36,0.58	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.445:0.091,0.372,0.537	1|1:1.563:0.053,0.332,0.616	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.459:0.074,0.393,0.533	1|1:2:0,0,1	1|1:1.893:0.005,0.096,0.898	1|1:2:0,0,1	1|0:1.589:0.02,0.37,0.61	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.393:0.105,0.396,0.498	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16279194	SNP-3.16277840.	A	G	.	PASS	AR2=0.991;DR2=0.991;AF=0.388	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.227:0.773,0.226,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.998:0.25,0.503,0.248	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.023:0.977,0.022,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.049:0.952,0.047,0.001	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.955:0.273,0.498,0.228	1|1:0.955:0.273,0.498,0.229	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.228:0.782,0.209,0.01	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16283872	SNP-3.16282518.	A	G	.	PASS	AR2=0.997;DR2=0.997;AF=0.443	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.212:0.798,0.191,0.011	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.017:0.983,0.017,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.135:0.871,0.123,0.006	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.951,0.046,0.003	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.097:0.903,0.097,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.082:0.923,0.072,0.005	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1
+3	16283978	SNP-3.16282624.	C	A	.	PASS	AR2=0.997;DR2=0.998;AF=0.474	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.041:0.96,0.04,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.05:0.95,0.05,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.037:0.964,0.036,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0.074:0.931,0.064,0.005	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0.033:0.968,0.032,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.079:0.921,0.079,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.152:0.863,0.123,0.014	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.039:0.961,0.039,0	0|0:0.087:0.915,0.083,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16284368	SNP-3.16283014.	C	A	.	PASS	AR2=0.995;DR2=0.996;AF=0.457	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.843:0,0.157,0.843	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.97:0,0.029,0.97	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.937:0,0.063,0.937	0|0:0.049:0.952,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.967:0,0.033,0.967	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.827:0,0.173,0.827	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.169:0.834,0.162,0.003	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.168:0.835,0.162,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.968:0,0.031,0.968	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.865:0.002,0.13,0.868	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.029:0.971,0.028,0.001	0|0:0:1,0,0	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16284457	SNP-3.16283103.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.257	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.171:0.829,0.171,0	0|0:0:1,0,0	0|0:0.031:0.969,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.844:0,0.156,0.844	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.965,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16289377	SNP-3.16288023.	C	A	.	PASS	AR2=0.955;DR2=0.966;AF=0.299	GT:DS:GP	1|1:1.956:0.001,0.042,0.957	1|1:1.832:0.021,0.126,0.853	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.998:0.06,0.883,0.058	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.526:0.059,0.357,0.585	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.633:0.055,0.257,0.688	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.44:0.07,0.42,0.51	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.963:0.212,0.614,0.175	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|0:0.816:0.236,0.712,0.052	1|1:2:0,0,1	0|1:0.806:0.324,0.546,0.13	1|1:1.683:0.009,0.298,0.693	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.863:0,0.136,0.864	1|1:1.912:0,0.088,0.912	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.357:0.001,0.641,0.358	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.091:0.913,0.082,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.034:0.966,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.961,0.039,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.802:0.022,0.155,0.824	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.439:0.084,0.394,0.522	0|0:0:1,0,0	1|1:1.357:0.11,0.423,0.467	0|0:0:1,0,0	1|1:1.215:0.158,0.469,0.373	0|0:0:1,0,0	0|0:0.37:0.719,0.192,0.089	1|1:1.539:0.068,0.325,0.607	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.347:0.738,0.176,0.086	0|0:0:1,0,0	1|0:1.48:0.075,0.371,0.555	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.907:0.003,0.086,0.91	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.177:0.839,0.145,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0
+3	16293444	SNP-3.16292090.	C	A	.	PASS	AR2=1;DR2=1;AF=0.3	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16294316	SNP-3.16292962.	C	A	.	PASS	AR2=0.995;DR2=0.996;AF=0.488	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.158:0.848,0.147,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.155:0.851,0.144,0.005	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.942,0.057,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.249:0.767,0.217,0.016	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.05,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.087:0.916,0.082,0.003	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.296:0.725,0.253,0.021	0|0:0.031:0.969,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16296108	SNP-3.16294754.	C	A	.	PASS	AR2=0.998;DR2=0.999;AF=0.449	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.533:0.467,0.533,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16297362	SNP-3.16296008.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.477	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.089:0.915,0.081,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.966:0.001,0.033,0.967	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	0|0:0.046:0.954,0.046,0	1|1:1.969:0,0.031,0.969	1|1:2:0,0,1	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.027,0.973	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16298293	SNP-3.16296939.	A	G	.	PASS	AR2=0.995;DR2=0.996;AF=0.378	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.644:0.382,0.591,0.027	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.028,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:1.628:0.015,0.342,0.643	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.174:0.832,0.162,0.006	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.944:0,0.056,0.944	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16300464	SNP-3.16299110.	C	A	.	PASS	AR2=1;DR2=1;AF=0.463	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16301802	SNP-3.16300448.	C	A	.	PASS	AR2=0.985;DR2=0.988;AF=0.437	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|1:1:0,1,0	1|1:1.996:0,0.004,0.996	0|0:0.117:0.886,0.112,0.003	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.922:0.001,0.077,0.922	1|0:1.257:0.154,0.436,0.411	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.962:0.001,0.037,0.963	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:1.829:0.001,0.169,0.83	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.7:0.01,0.28,0.71	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.915:0.001,0.083,0.916	1|1:1.79:0.007,0.195,0.797	1|1:1.621:0.033,0.313,0.654	1|1:1.556:0.046,0.352,0.602	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.962:0,0.038,0.962	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:1.879:0.002,0.117,0.881	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.959:0.001,0.04,0.959	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.916:0,0.084,0.916	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.898:0.003,0.096,0.901	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.936:0.001,0.062,0.937	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.94:0,0.06,0.94	1|0:1:0,1,0	1|1:1.822:0.004,0.171,0.825	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.03:0.97,0.03,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.982:0,0.018,0.982	0|1:0.753:0.264,0.719,0.017	1|1:1.968:0.001,0.029,0.97	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16305363	SNP-3.16304009.	C	A	.	PASS	AR2=1;DR2=1;AF=0.444	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16305784	SNP-3.16304430.	A	G	.	PASS	AR2=1;DR2=1;AF=0.235	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16306048	SNP-3.16304694.	C	A	.	PASS	AR2=0.996;DR2=0.996;AF=0.462	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.879:0,0.121,0.879	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.944:0,0.056,0.944	1|1:2:0,0,1	1|1:1.956:0,0.044,0.956	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.106:0.002,0.891,0.108	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.048:0.952,0.047,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.149:0.859,0.133,0.008	0|0:0.05:0.95,0.049,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.107:0.898,0.097,0.005	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.023:0.977,0.022,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.966,0.034,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.09:0.915,0.08,0.005	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.091:0.913,0.083,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.031:0.969,0.03,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.058:0.943,0.057,0.001	1|1:2:0,0,1	0|0:0:1,0,0
+3	16307341	SNP-3.16305987.	C	A	.	PASS	AR2=0.997;DR2=0.998;AF=0.457	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.265:0.735,0.264,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.258:0.742,0.258,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.049:0.952,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.054:0.947,0.052,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.067:0.933,0.067,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16307741	SNP-3.16306387.	A	G	.	PASS	AR2=1;DR2=1;AF=0.255	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16308213	SNP-3.16306859.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.265	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.026:0,0.973,0.027	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	1|1:2:0,0,1	0|0:0.051:0.95,0.05,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.114:0.886,0.114,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1
+3	16308525	SNP-3.16307171.	C	A	.	PASS	AR2=0.993;DR2=0.994;AF=0.442	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.044:0.274,0.409,0.318	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.975:0,0.025,0.975	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.946:0,0.054,0.946	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.469:0.123,0.285,0.592	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.984:0,0.015,0.985	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.779:0.001,0.22,0.779	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16309467	SNP-3.16308113.	C	A	.	PASS	AR2=0.955;DR2=0.965;AF=0.342	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.218:0.823,0.136,0.041	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.598:0.037,0.328,0.635	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:1.98:0,0.02,0.98	0|0:0:1,0,0	1|0:1.354:0.033,0.581,0.387	0|0:0:1,0,0	1|1:1.623:0.044,0.288,0.668	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.947:0.142,0.77,0.088	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.314:0.133,0.42,0.447	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.062:0.939,0.06,0.001	0|0:0.089:0.918,0.074,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.111:0.894,0.101,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.957,0.042,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0.049:0.952,0.047,0.001	0|0:0.064:0.937,0.062,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.941,0.058,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.061:0.94,0.059,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.58:0.435,0.549,0.016	1|1:2:0,0,1	0|0:0.075:0.932,0.061,0.007	1|1:2:0,0,1	0|0:0.573:0.491,0.445,0.064	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.586:0.533,0.348,0.119	0|0:0.091:0.911,0.086,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.079:0.192,0.538,0.271	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.957,0.043,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.945,0.053,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.264:0.754,0.227,0.018	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.948:0.001,0.05,0.949	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.264:0.754,0.227,0.018	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.179:0.837,0.147,0.016	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.052:0.948,0.051,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.17:0.115,0.599,0.285	1|1:1.805:0.007,0.182,0.811	0|0:0.058:0.943,0.057,0	0|1:0.914:0.086,0.914,0	0|0:0:1,0,0	0|0:0.057:0.943,0.056,0.001	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.144:0.857,0.142,0.001	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.716:0.024,0.236,0.74	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.178:0.843,0.136,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.921:0.295,0.489,0.216	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.921:0.295,0.489,0.216	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.264:0.754,0.227,0.018	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.969,0.031,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16310777	SNP-3.16309423.	A	G	.	PASS	AR2=1;DR2=1;AF=0.253	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16310932	SNP-3.16309578.	A	G	.	PASS	AR2=1;DR2=1;AF=0.292	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16314149	SNP-3.16312795.	C	A	.	PASS	AR2=0.943;DR2=0.957;AF=0.373	GT:DS:GP	1|1:1.889:0.006,0.1,0.895	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.115:0.889,0.107,0.004	1|1:1.889:0.006,0.1,0.895	1|1:2:0,0,1	1|1:1.885:0.005,0.105,0.89	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.881:0.005,0.109,0.886	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.459:0.066,0.409,0.525	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.213:0.118,0.551,0.331	1|1:1.507:0.063,0.367,0.57	1|1:2:0,0,1	0|1:1.51:0.06,0.37,0.57	1|1:1.69:0.031,0.249,0.721	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.752:0.018,0.213,0.769	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.794:0.011,0.184,0.805	0|0:0:1,0,0	0|0:0.081:0.921,0.078,0.002	0|0:0.119:0.885,0.11,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.565:0.05,0.336,0.615	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.956,0.044,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.103:0.899,0.099,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.697:0.006,0.292,0.703	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.823:0.2,0.776,0.023	0|0:0:1,0,0	1|1:1.887:0,0.112,0.887	0|0:0:1,0,0	1|0:0.766:0.261,0.711,0.027	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.564:0.048,0.341,0.612	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.703:0.016,0.266,0.718	1|0:1.117:0.116,0.652,0.232	1|1:2:0,0,1	0|0:0.054:0.949,0.047,0.003	0|0:0:1,0,0	1|1:1.249:0.11,0.532,0.359	0|0:0.052:0.948,0.051,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.792:0.007,0.194,0.799	0|0:0:1,0,0	1|1:1.98:0,0.02,0.98	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.459:0.078,0.385,0.537	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.353:0.102,0.444,0.455	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.528:0.057,0.358,0.585	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.604:0.051,0.293,0.655	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.1:0.903,0.094,0.003	1|1:1.706:0.02,0.253,0.726	1|1:1.45:0.078,0.395,0.527	1|1:1.509:0.06,0.372,0.569	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.902:0.005,0.088,0.907	1|1:1.863:0.007,0.124,0.869	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.05,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.1:0.902,0.095,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.786:0.013,0.189,0.799	0|0:0:1,0,0	1|1:1.784:0.013,0.189,0.798	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.411:0.665,0.259,0.076	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.918:0.003,0.075,0.921	0|0:0:1,0,0	0|0:0.052:0.951,0.046,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.086:0.919,0.076,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16315527	SNP-3.16314173.	C	A	.	PASS	AR2=0.993;DR2=0.994;AF=0.461	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.053:0.948,0.051,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.251:0.147,0.454,0.398	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.083:0.919,0.079,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.187:0.819,0.176,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.037:0.963,0.037,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.93:0.001,0.068,0.931	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.251:0.147,0.454,0.398	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.078:0.923,0.076,0.001	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16317559	SNP-3.16316205.	C	A	.	PASS	AR2=0.897;DR2=0.922;AF=0.311	GT:DS:GP	1|1:2:0,0,1	1|1:1.9:0.003,0.094,0.903	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.012:0.988,0.012,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.621:0.497,0.384,0.118	1|1:1.81:0.009,0.171,0.819	1|0:0.994:0.233,0.54,0.227	0|0:0:1,0,0	0|1:1.155:0.184,0.477,0.339	1|0:0.936:0.272,0.52,0.208	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.328:0.101,0.47,0.429	0|0:0.867:0.323,0.487,0.19	0|1:0.623:0.496,0.384,0.119	0|1:0.643:0.468,0.421,0.111	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:0.8:0.342,0.517,0.142	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.371:0.659,0.31,0.031	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.103:0.179,0.539,0.282	0|1:1.217:0.128,0.527,0.345	0|1:1.162:0.198,0.442,0.36	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.759:0,0.241,0.759	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1.084:0.006,0.905,0.09	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.101:0.906,0.087,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.858:0.326,0.49,0.184	1|1:1.894:0.002,0.102,0.896	0|0:0.097:0.903,0.097,0	0|0:0:1,0,0	1|1:1.977:0,0.023,0.977	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.618:0.499,0.384,0.117	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.889:0.005,0.101,0.894	0|0:0.647:0.463,0.426,0.111	1|0:1:0,1,0	1|1:1.505:0.029,0.438,0.533	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.674:0.008,0.31,0.682	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.395:0.643,0.319,0.038	0|1:0.632:0.483,0.401,0.116	0|1:0.557:0.533,0.377,0.09	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.662:0.024,0.289,0.687	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.984:0,0.016,0.984	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.839:0.007,0.146,0.847	1|1:2:0,0,1	0|0:0.561:0.527,0.385,0.088	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.112:0.207,0.475,0.319	1|0:0.943:0.297,0.464,0.24	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.278:0.138,0.446,0.416	0|0:0.623:0.496,0.384,0.119	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.36:0.674,0.292,0.034	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.382:0.654,0.309,0.037	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.36:0.674,0.292,0.034	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.36:0.674,0.292,0.034	0|0:0:1,0,0	0|0:0.369:0.667,0.298,0.035	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.849:0.376,0.399,0.225	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16321861	SNP-3.16320507.	C	A	.	PASS	AR2=0.992;DR2=0.993;AF=0.436	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.027,0.972	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.835:0.008,0.149,0.843	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.708:0.421,0.451,0.128	1|1:2:0,0,1	1|0:0.697:0.428,0.448,0.124	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.967:0.001,0.032,0.968	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.708:0.421,0.451,0.128	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16322325	SNP-3.16320971.	C	A	.	PASS	AR2=0.98;DR2=0.984;AF=0.42	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.944:0.001,0.054,0.945	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.081:0.92,0.079,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.901:0.003,0.093,0.904	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.457:0.08,0.383,0.537	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.853:0.201,0.745,0.054	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	1|1:1.758:0.031,0.18,0.789	1|1:1.792:0.014,0.18,0.806	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.752:0.009,0.229,0.762	1|1:1.808:0.011,0.17,0.819	1|1:1.928:0.002,0.067,0.931	1|1:1.614:0.031,0.324,0.645	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.197:0.816,0.172,0.012	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.846:0.007,0.141,0.852	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.821:0.027,0.124,0.849	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.119:0.136,0.609,0.255	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.968:0,0.032,0.968	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.889:0.002,0.107,0.891	1|1:2:0,0,1	1|1:1.872:0.006,0.116,0.878	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.977:0,0.023,0.977	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.02,0	0|0:0.022:0.979,0.02,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.432:0.074,0.419,0.507	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.92:0.002,0.077,0.922	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.96:0.002,0.036,0.962	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16324424	SNP-3.16323070.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.313	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.976:0,0.024,0.976	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.874:0.002,0.122,0.876	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.956:0.046,0.953,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16325371	SNP-3.16324017.	A	G	.	PASS	AR2=1;DR2=1;AF=0.399	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16326374	SNP-3.16325020.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.449	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.938:0.001,0.06,0.939	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.954:0,0.045,0.955	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.972:0,0.028,0.972	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.965:0,0.035,0.965	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16330389	SNP-3.16329035.	A	G	.	PASS	AR2=1;DR2=1;AF=0.434	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.033:0.967,0.033,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16331393	SNP-3.16330039.	A	G	.	PASS	AR2=0.989;DR2=0.991;AF=0.526	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.905:0.003,0.088,0.909	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.805:0.007,0.18,0.813	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.915:0.002,0.082,0.917	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.874:0.003,0.12,0.877	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.96:0,0.039,0.961	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.836:0.007,0.149,0.843	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.936:0.003,0.058,0.939	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.598:0.007,0.387,0.605	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.875:0.003,0.118,0.878	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.876:0.007,0.111,0.882	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.822:0.001,0.175,0.823	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.98:0,0.02,0.98	1|1:1.982:0,0.017,0.982	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.804:0.004,0.188,0.808	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.421:0.018,0.543,0.439	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.942:0.001,0.056,0.943	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.864:0.005,0.127,0.868	1|1:1.977:0,0.022,0.977	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16331681	SNP-3.16330327.	A	G	.	PASS	AR2=0.957;DR2=0.964;AF=0.377	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.956:0.001,0.043,0.957	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.831:0.007,0.155,0.838	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.554:0.046,0.353,0.601	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.62:0.039,0.302,0.659	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.937:0.001,0.06,0.938	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.861:0.005,0.13,0.866	1|1:1.871:0.004,0.121,0.875	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.742:0.003,0.252,0.745	1|1:2:0,0,1	1|1:1.528:0.049,0.373,0.578	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.88:0.004,0.112,0.884	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1.406:0.062,0.469,0.468	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.72:0.021,0.238,0.741	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.198:0.157,0.488,0.355	1|1:2:0,0,1	1|1:1.587:0.046,0.32,0.633	1|1:2:0,0,1	1|1:1.894:0.003,0.1,0.897	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:0.939:0.288,0.485,0.227	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.938:0.288,0.485,0.227	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.939:0.288,0.485,0.227	0|0:0:1,0,0	0|0:0.938:0.289,0.485,0.226	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.666:0.031,0.271,0.697	1|1:1.821:0.011,0.157,0.832	0|1:1:0,1,0	1|1:1.65:0.03,0.289,0.68	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.614:0.038,0.311,0.651	1|1:1.951:0.001,0.047,0.952	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.094:0.061,0.784,0.155	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.945:0.001,0.054,0.946	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1.136:0.037,0.791,0.172	1|0:1:0,1,0	1|1:1.571:0.042,0.346,0.613	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.816:0.003,0.178,0.819	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16331717	SNP-3.16330363.	C	A	.	PASS	AR2=0.984;DR2=0.986;AF=0.423	GT:DS:GP	1|1:2:0,0,1	1|1:1.956:0.002,0.041,0.957	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.923:0.001,0.074,0.924	1|1:1.91:0.008,0.074,0.918	1|1:1.853:0.007,0.133,0.86	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.932:0.002,0.065,0.933	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.899:0.003,0.096,0.901	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.892:0.002,0.104,0.894	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.9:0.002,0.096,0.902	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.845:0.003,0.149,0.848	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.816:0.001,0.182,0.817	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:1.81:0.021,0.147,0.832	1|1:1.925:0.001,0.073,0.926	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.609:0.017,0.357,0.626	1|1:1.838:0.001,0.16,0.839	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.969:0.001,0.03,0.969	1|1:1.935:0.001,0.063,0.936	0|0:0:1,0,0	1|1:1.919:0,0.081,0.919	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:1.97:0,0.029,0.97	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.923:0.125,0.828,0.048	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.912:0.001,0.087,0.912	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:1.956:0.001,0.041,0.957	0|0:0:1,0,0	1|1:1.851:0.013,0.123,0.864	1|1:1.86:0.001,0.139,0.861	1|1:1.904:0,0.096,0.904	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.945:0.002,0.052,0.947	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.825:0.01,0.154,0.836	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.844:0.001,0.154,0.845	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.582:0.02,0.378,0.602	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.945:0.001,0.054,0.946	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.969:0,0.031,0.969	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.925:0.002,0.07,0.927	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.028,0.972	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.958:0.001,0.04,0.959	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16333225	SNP-3.16331871.	C	A	.	PASS	AR2=0.966;DR2=0.972;AF=0.369	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.727:0.021,0.231,0.748	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1.55:0.043,0.364,0.593	0|0:0:1,0,0	0|1:1.7:0.024,0.252,0.724	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.752:0.015,0.219,0.766	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.91:0.005,0.08,0.915	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.024:0.976,0.023,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.793:0.001,0.205,0.794	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.688:0.023,0.266,0.711	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.739:0.015,0.232,0.754	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.642:0.033,0.292,0.675	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.895:0,0.105,0.895	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.833:0.004,0.159,0.837	0|0:0:1,0,0	1|1:1.65:0.032,0.287,0.681	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.053:0.229,0.488,0.282	1|1:1.816:0.007,0.169,0.823	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.658:0.032,0.278,0.69	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.753:0.02,0.206,0.774	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.693:0.021,0.265,0.714	1|1:1.789:0.014,0.183,0.803	1|1:1.66:0.023,0.295,0.683	1|1:1.776:0.013,0.197,0.79	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.936,0.063,0.001	1|1:1.712:0.022,0.244,0.734	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.797:0.016,0.17,0.813	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.963:0,0.037,0.963	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.725:0.019,0.238,0.743	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.732:0.022,0.224,0.754	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.597:0.062,0.279,0.659	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16333844	SNP-3.16332490.	A	G	.	PASS	AR2=0.918;DR2=0.941;AF=0.361	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.924,0.076,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.367:0.107,0.42,0.473	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.477:0.585,0.352,0.062	0|0:0.647:0.525,0.303,0.172	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.693:0.021,0.265,0.714	0|0:0.612:0.421,0.547,0.033	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.307:0.708,0.277,0.015	0|0:0.594:0.483,0.439,0.078	0|0:0:1,0,0	1|1:1.629:0.008,0.355,0.637	1|1:2:0,0,1	0|1:1.262:0.051,0.635,0.313	0|0:0.287:0.727,0.26,0.013	0|0:0:1,0,0	0|0:0.506:0.557,0.38,0.063	1|1:1.901:0.004,0.091,0.905	0|0:0:1,0,0	1|0:1.155:0.177,0.49,0.332	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.409:0.089,0.413,0.498	1|1:2:0,0,1	1|0:0.835:0.288,0.589,0.123	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.476:0.069,0.387,0.544	1|1:2:0,0,1	1|0:1.413:0.126,0.335,0.539	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.179:0.829,0.164,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.759:0.38,0.481,0.139	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.221:0.143,0.493,0.364	0|1:1.384:0.098,0.421,0.481	0|1:1.117:0.224,0.435,0.341	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.523:0.055,0.367,0.578	0|0:0:1,0,0	1|1:1.381:0.092,0.434,0.474	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.333:0.694,0.28,0.026	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.109:0.148,0.594,0.257	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.141:0.087,0.686,0.227	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	1|1:1.348:0.108,0.436,0.456	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.711:0.377,0.536,0.087	1|1:2:0,0,1	1|0:1.234:0.079,0.608,0.313	1|0:0.977:0.26,0.502,0.237	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.251:0.138,0.474,0.388	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.741:0.39,0.48,0.131	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.189:0.825,0.162,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.952:0.001,0.047,0.952	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0,0.021,0.979	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.403:0.091,0.415,0.494	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16334375	SNP-3.16333021.	A	G	.	PASS	AR2=1;DR2=1;AF=0.327	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16334945	SNP-3.16333591.	C	A	.	PASS	AR2=0.952;DR2=0.963;AF=0.37	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.67:0.035,0.259,0.705	1|1:2:0,0,1	0|0:0.002:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.899:0.002,0.097,0.901	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.633:0.037,0.293,0.67	1|1:1.703:0.026,0.245,0.729	1|1:1.622:0.045,0.287,0.668	1|1:2:0,0,1	1|1:1.632:0.037,0.294,0.669	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.563:0.063,0.312,0.626	1|1:2:0,0,1	1|1:1.649:0.033,0.285,0.682	0|0:0:1,0,0	1|1:1.775:0.01,0.204,0.785	1|1:1.84:0.007,0.145,0.848	0|1:1:0,1,0	1|1:1.689:0.023,0.264,0.713	1|1:1.761:0.015,0.21,0.776	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.69:0.024,0.263,0.713	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.826:0.007,0.161,0.832	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.553:0.048,0.351,0.601	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.816:0.011,0.162,0.827	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.801:0.01,0.179,0.811	1|0:1.593:0.041,0.325,0.634	1|1:1.758:0.015,0.212,0.773	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.807:0.009,0.175,0.816	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.713:0.021,0.246,0.733	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.836:0.006,0.153,0.842	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.917:0.001,0.081,0.918	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.56:0.052,0.335,0.613	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.901:0.004,0.092,0.905	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.562:0.004,0.429,0.566	0|0:0:1,0,0	1|1:1.936:0.001,0.062,0.937	1|1:1.975:0,0.024,0.976	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.537:0.072,0.319,0.609	1|1:1.758:0.015,0.212,0.773	0|1:1.273:0.177,0.374,0.45	0|0:0:1,0,0	1|1:1.958:0.002,0.038,0.96	1|1:2:0,0,1	1|1:1.731:0.032,0.204,0.763	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.943:0.002,0.052,0.946	1|0:1.477:0.092,0.34,0.569	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16338196	SNP-3.16336842.	C	A	.	PASS	AR2=0.99;DR2=0.991;AF=0.42	GT:DS:GP	1|1:1.939:0.001,0.058,0.941	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.909:0.002,0.086,0.912	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.884:0.003,0.111,0.887	0|1:1:0,1,0	0|0:0.038:0.963,0.037,0	0|0:0:1,0,0	0|0:0.052:0.95,0.047,0.003	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0.091:0.912,0.086,0.003	0|0:0.104:0.899,0.098,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.035:0.965,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.095:0.907,0.091,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.107:0.896,0.101,0.003	0|0:0.02:0.98,0.02,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0.103:0.901,0.095,0.004	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.931,0.068,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.954:0,0.045,0.954	1|1:2:0,0,1	0|0:0.241:0.776,0.207,0.017	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.069:0.933,0.066,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.054:0.947,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.084:0.919,0.079,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.098:0.904,0.094,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.089:0.913,0.085,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.832:0.005,0.157,0.838	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.975:0,0.025,0.975	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.939:0,0.06,0.94	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.104:0.9,0.097,0.003	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.965:0.001,0.034,0.965	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.984:0,0.016,0.984	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.159:0.847,0.147,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16339322	SNP-3.16337968.	C	A	.	PASS	AR2=0.979;DR2=0.982;AF=0.375	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.301:0.053,0.594,0.354	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.9:0.003,0.094,0.903	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.879:0.004,0.112,0.883	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.867:0.002,0.13,0.868	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.852:0.005,0.138,0.857	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.188:0.163,0.486,0.351	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.758:0.012,0.218,0.77	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.831:0.005,0.158,0.837	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.857:0.005,0.132,0.863	1|1:1.922:0.002,0.074,0.924	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.874:0.004,0.118,0.878	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.91:0.001,0.087,0.911	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:1.944:0.001,0.054,0.945	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.593:0.047,0.312,0.641	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.968:0.001,0.031,0.968	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.933:0.001,0.065,0.934	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.905:0.003,0.09,0.908	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.973:0,0.026,0.973	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.898:0.003,0.096,0.901	1|1:1.953:0.001,0.045,0.954	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.816:0.009,0.166,0.825	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.948:0.001,0.05,0.949	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.682:0.026,0.265,0.708	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.949:0,0.05,0.95	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.921:0.003,0.074,0.924	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.818:0.009,0.164,0.827	0|0:0:1,0,0	1|1:1.818:0.009,0.164,0.827	0|0:0:1,0,0	1|1:1.815:0.009,0.167,0.824	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.864:0.006,0.124,0.87	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.993:0,0.006,0.993	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.969:0.001,0.03,0.97	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.957:0,0.043,0.957	0|0:0:1,0,0
+3	16340091	SNP-3.16338737.	A	G	.	PASS	AR2=0.984;DR2=0.988;AF=0.422	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.52:0.552,0.377,0.072	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.843:0.006,0.145,0.849	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.847:0.006,0.141,0.853	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.864:0.005,0.126,0.869	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.807:0.201,0.79,0.008	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.788:0.012,0.187,0.801	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.594:0.042,0.323,0.636	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.836:0.007,0.15,0.843	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.589:0.033,0.346,0.622	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.791:0.012,0.186,0.802	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.864:0.005,0.125,0.87	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.825:0.008,0.16,0.833	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.802:0.01,0.178,0.812	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16340649	SNP-3.16339295.	A	G	.	PASS	AR2=0.996;DR2=0.996;AF=0.193	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:1.905:0,0.095,0.905	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0.07:0.93,0.07,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|1:1:0,1,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0.014:0.986,0.013,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|1:1:0,1,0	0|0:0.013:0.987,0.013,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.932:0.002,0.063,0.934	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.08:0.92,0.08,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.015:0.985,0.015,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16341869	SNP-3.16340515.	C	A	.	PASS	AR2=0.997;DR2=0.998;AF=0.425	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.081:0.921,0.077,0.002	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.037:0.963,0.037,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.963,0.037,0	0|0:0:1,0,0	0|0:0.042:0.958,0.041,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.965,0.035,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.353:0.65,0.346,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.961,0.039,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16342531	SNP-3.16341177.	A	G	.	PASS	AR2=0.993;DR2=0.994;AF=0.419	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.88:0.005,0.111,0.885	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.963:0.001,0.036,0.964	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.884:0.001,0.114,0.885	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.925:0.002,0.071,0.927	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.909:0.002,0.087,0.911	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.898:0.003,0.097,0.901	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.739:0.011,0.24,0.749	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.839:0.006,0.15,0.844	1|1:2:0,0,1	1|1:1.892:0.003,0.103,0.895	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.918:0.002,0.078,0.92	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.963:0.001,0.035,0.964	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.899:0.002,0.097,0.901	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.964:0.001,0.034,0.965	0|0:0.025:0.975,0.025,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.877:0.004,0.114,0.881	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.928:0.001,0.069,0.929	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.918:0.002,0.078,0.92	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16342579	SNP-3.16341225.	A	G	.	PASS	AR2=0.994;DR2=0.995;AF=0.428	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0.007:0.993,0.007,0	1|1:1.784:0.012,0.192,0.796	1|1:1.87:0.007,0.115,0.878	1|1:2:0,0,1	1|1:1.908:0.003,0.086,0.911	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.006:0.994,0.006,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.094:0.909,0.087,0.004	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	0|0:0:1,0,0	1|1:1.97:0,0.03,0.97	1|1:1.972:0,0.028,0.972	1|1:1.97:0,0.029,0.971	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.026,0.973	1|1:1.976:0,0.023,0.976	0|1:1:0,1,0	1|1:1.972:0,0.027,0.972	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0,0.025,0.975	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.028,0.972	1|1:2:0,0,1	1|1:1.975:0,0.025,0.975	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.991:0.009,0.991,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	1|1:1.886:0,0.113,0.886	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	1|1:1.781:0.013,0.194,0.793	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.97:0,0.029,0.971	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16342932	SNP-3.16341578.	C	A	.	PASS	AR2=0.981;DR2=0.985;AF=0.384	GT:DS:GP	1|1:2:0,0,1	1|1:1.915:0,0.084,0.915	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.946:0.002,0.049,0.949	0|0:0:1,0,0	1|1:1.886:0.005,0.104,0.891	1|1:1.811:0.007,0.175,0.818	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.905:0.002,0.091,0.907	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.865:0.004,0.127,0.869	1|1:1.427:0.03,0.513,0.457	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.955:0,0.044,0.955	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.879:0,0.121,0.879	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.905:0.001,0.094,0.906	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.935:0,0.065,0.935	1|1:1.734:0.001,0.264,0.735	0|0:0:1,0,0	0|1:1.319:0.093,0.495,0.412	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.928:0.002,0.069,0.93	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.661:0.03,0.279,0.691	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.622:0.016,0.346,0.638	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.948:0.001,0.05,0.949	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.888:0.002,0.107,0.89	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.916:0.003,0.079,0.919	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.533:0.007,0.454,0.539	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.618:0.041,0.3,0.659	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.904:0.004,0.088,0.908	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16345758	SNP-3.16344404.	C	A	.	PASS	AR2=0.973;DR2=0.978;AF=0.39	GT:DS:GP	1|1:1.949:0.002,0.046,0.952	1|1:1.919:0.001,0.08,0.92	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.956:0.001,0.042,0.957	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.867:0.004,0.124,0.871	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.633:0.031,0.305,0.664	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.525:0.609,0.257,0.134	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.213:0.098,0.59,0.312	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.854:0.002,0.143,0.856	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.869:0.001,0.129,0.87	1|1:1.845:0.002,0.152,0.847	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.773:0.015,0.198,0.787	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.956:0.001,0.041,0.957	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.706:0.023,0.248,0.729	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.744:0.256,0.744,0	0|0:0:1,0,0	1|1:1.94:0,0.059,0.94	0|0:0:1,0,0	1|1:1.74:0.004,0.252,0.744	0|0:0:1,0,0	1|1:1.819:0.009,0.163,0.828	0|0:0:1,0,0	1|1:1.873:0.004,0.119,0.877	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.701:0.024,0.251,0.725	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.653:0.024,0.3,0.676	1|1:2:0,0,1	1|1:1.826:0.008,0.158,0.834	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.18:0.82,0.18,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.932:0.002,0.065,0.934	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.497:0.061,0.38,0.558	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.694:0.027,0.252,0.721	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.914:0.002,0.081,0.917	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.956:0.001,0.042,0.957	1|1:1.904:0.002,0.091,0.906	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.047:0.956,0.042,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.888:0.005,0.103,0.893	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16346000	SNP-3.16344646.	A	G	.	PASS	AR2=0.921;DR2=0.933;AF=0.27	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.176:0.171,0.483,0.346	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.401:0.648,0.304,0.049	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.273:0.745,0.236,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.252:0.146,0.456,0.398	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.109:0.195,0.502,0.304	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.428:0.645,0.283,0.072	0|1:1.106:0.196,0.502,0.302	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.034:0.233,0.5,0.267	0|0:0.125:0.876,0.122,0.002	0|0:0.467:0.6,0.332,0.067	1|0:1.089:0.21,0.491,0.299	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.805:0.347,0.501,0.152	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.892:0.27,0.567,0.162	0|1:1.07:0.219,0.491,0.29	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.402:0.169,0.26,0.571	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.103:0.897,0.102,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.419:0.637,0.306,0.057	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.175:0.833,0.16,0.007	0|0:0.178:0.829,0.164,0.007	0|0:0:1,0,0	0|0:0.174:0.835,0.156,0.009	0|0:0.126:0.881,0.113,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.17:0.839,0.153,0.009	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.828:0.327,0.518,0.155	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.154:0.85,0.146,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.965,0.034,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.086:0.915,0.083,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.248:0.767,0.219,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.227:0.789,0.196,0.016	0|0:0.084:0.916,0.083,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.147:0.86,0.132,0.008	0|0:0.035:0.965,0.034,0.001	1|1:2:0,0,1	0|0:0.131:0.876,0.118,0.007	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.14:0.184,0.493,0.324	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.022:0.244,0.49,0.266	0|1:0.872:0.313,0.502,0.185	0|0:0.226:0.789,0.195,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.131:0.874,0.122,0.004	0|0:0:1,0,0	0|0:0.311:0.711,0.267,0.022	0|0:0:1,0,0	1|1:1.972:0,0.028,0.972	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.652:0.463,0.422,0.115	1|0:1.149:0.007,0.836,0.157	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.307:0.721,0.251,0.028	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.937:0,0.063,0.937	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.141:0.178,0.503,0.319	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.962,0.037,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16349441	SNP-3.16348087.	A	G	.	PASS	AR2=0.993;DR2=0.995;AF=0.314	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.969:0,0.03,0.97	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.985:0,0.014,0.986	1|1:1.98:0,0.019,0.981	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.982:0,0.018,0.982	1|1:1.958:0.001,0.041,0.958	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.927:0.001,0.07,0.928	0|1:1.552:0.011,0.426,0.563	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.955:0.001,0.044,0.956	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.967:0,0.032,0.967	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.977:0.023,0.977,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.858:0.004,0.135,0.861	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.979:0,0.021,0.979	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.947:0.001,0.051,0.948	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.336:0.046,0.573,0.382	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16352546	SNP-3.16351192.	C	A	.	PASS	AR2=0.962;DR2=0.97;AF=0.399	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.694:0.027,0.252,0.721	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.63:0.033,0.303,0.664	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.702:0.025,0.249,0.727	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:1.886:0.002,0.11,0.888	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.053:0.099,0.749,0.152	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.923:0.004,0.068,0.927	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.534:0.538,0.391,0.072	1|1:1.751:0.028,0.192,0.78	1|1:2:0,0,1	1|1:1.805:0.009,0.177,0.814	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.837:0.007,0.15,0.843	1|1:1.562:0.166,0.105,0.728	1|1:1.561:0.06,0.319,0.621	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.107:0.9,0.093,0.007	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.188:0.105,0.601,0.293	0|0:0:1,0,0	1|1:1.877:0.002,0.119,0.879	0|0:0:1,0,0	1|1:1.671:0.027,0.275,0.698	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.648:0.038,0.276,0.686	1|1:1.662:0.03,0.277,0.693	1|1:2:0,0,1	1|1:1.751:0.022,0.205,0.773	1|1:2:0,0,1	0|0:0.24:0.763,0.233,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.684:0.017,0.282,0.701	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.745:0.02,0.216,0.765	1|1:1.882:0.004,0.11,0.886	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.018:0.982,0.018,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.854:0.007,0.131,0.861	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.708:0.013,0.266,0.721	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|1:1.683:0.057,0.202,0.74	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.919:0.001,0.078,0.921	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.962:0.001,0.037,0.962	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.862:0.007,0.125,0.869	0|0:0:1,0,0	1|1:1.862:0.007,0.125,0.868	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.831:0.009,0.151,0.84	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.859:0.007,0.127,0.866	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.828:0.01,0.152,0.838	0|0:0:1,0,0
+3	16353769	SNP-3.16352415.	C	A	.	PASS	AR2=0.937;DR2=0.953;AF=0.4	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.43:0.082,0.406,0.512	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.467:0.063,0.406,0.53	1|1:2:0,0,1	1|1:1.735:0.017,0.231,0.752	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.026:0.125,0.725,0.151	0|0:0:1,0,0	1|1:1.286:0.114,0.485,0.401	0|1:1.176:0.082,0.66,0.258	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.736:0.017,0.229,0.753	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.21:0.176,0.437,0.386	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.813:0.013,0.161,0.826	1|1:1.27:0.17,0.389,0.441	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.807:0.016,0.161,0.823	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.033:0.967,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.067:0.934,0.065,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.887:0.002,0.109,0.889	1|1:2:0,0,1	1|1:1.774:0.003,0.221,0.777	1|1:2:0,0,1	0|0:0.066:0.936,0.063,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.73:0.003,0.265,0.733	0|0:0:1,0,0	0|1:1.222:0.156,0.467,0.378	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.864:0.008,0.12,0.872	1|1:2:0,0,1	1|1:1.575:0.039,0.347,0.614	1|1:1.421:0.097,0.385,0.518	0|0:0:1,0,0	1|1:1.939:0,0.061,0.939	0|0:0.076:0.925,0.073,0.001	1|0:1.578:0,0.422,0.578	0|0:0:1,0,0	1|1:1.845:0,0.155,0.845	0|0:0:1,0,0	1|1:1.545:0.026,0.403,0.571	0|0:0:1,0,0	1|1:1.818:0.012,0.157,0.83	0|0:0:1,0,0	1|1:1.861:0.004,0.132,0.865	0|0:0.033:0.968,0.032,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.864:0.012,0.112,0.876	0|0:0:1,0,0	1|1:1.622:0.034,0.311,0.656	1|1:1.482:0.051,0.416,0.533	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.56:0.058,0.323,0.618	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.833:0.008,0.15,0.842	0|0:0.07:0.931,0.067,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.928:0,0.072,0.928	0|0:0:1,0,0	0|0:0.078:0.924,0.074,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.936,0.063,0.001	0|0:0:1,0,0	0|0:0.023:0.977,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.833:0.009,0.149,0.842	1|1:2:0,0,1	1|1:1.784:0.014,0.188,0.798	1|1:1.896:0.003,0.097,0.899	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.684:0.03,0.255,0.715	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.527:0.05,0.373,0.577	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.105:0.897,0.101,0.002	0|0:0:1,0,0	0|0:0.081:0.921,0.078,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.863:0.008,0.12,0.871	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.674:0.011,0.303,0.685	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.703:0.029,0.24,0.732	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.973:0,0.027,0.973	1|1:2:0,0,1	0|0:0.67:0.537,0.256,0.207	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.919:0.002,0.077,0.921	0|0:0:1,0,0
+3	16356870	SNP-3.16355516.	A	G	.	PASS	AR2=0.953;DR2=0.964;AF=0.448	GT:DS:GP	0|0:0.099:0.904,0.094,0.003	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.369:0.664,0.304,0.032	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.263:0.755,0.227,0.018	0|0:0:1,0,0	1|1:1.527:0.058,0.356,0.585	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.094:0.908,0.09,0.002	0|0:0.216:0.795,0.194,0.011	1|1:1.882:0.004,0.111,0.885	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.14:0.864,0.131,0.005	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.893:0.003,0.101,0.896	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.874:0.004,0.118,0.878	0|0:0.356:0.677,0.289,0.033	0|0:0.609:0.493,0.405,0.102	1|1:1.904:0.002,0.091,0.907	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.877:0.004,0.115,0.881	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:0.998:0.012,0.978,0.01	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.996:0.013,0.978,0.009	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.979:0.034,0.953,0.013	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.884:0.003,0.109,0.888	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.441:0.61,0.339,0.051	0|0:0:1,0,0	1|0:0.827:0.329,0.516,0.155	0|0:0:1,0,0	0|0:0.151:0.849,0.151,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.051:0.949,0.051,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.191:0.809,0.191,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.174:0.833,0.159,0.008	0|0:0.34:0.719,0.223,0.058	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.437:0.63,0.303,0.067	0|0:0:1,0,0	1|1:1.965:0.001,0.033,0.966	1|1:1.763:0.019,0.199,0.782	1|1:1.76:0.005,0.23,0.765	0|1:1:0,1,0	1|1:1.892:0.003,0.102,0.895	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.908,0.088,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.429:0.619,0.333,0.048	1|0:1:0,1,0	0|0:0.415:0.627,0.332,0.041	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.108:0.893,0.107,0.001	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.58:0.044,0.333,0.623	1|1:1.858:0.005,0.132,0.863	0|1:1.52:0.06,0.359,0.58	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.907:0.002,0.088,0.909	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.414:0.631,0.323,0.046	1|1:1.984:0,0.016,0.984	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.067:0.938,0.056,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.097:0.905,0.092,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.889:0.003,0.105,0.892	0|0:0:1,0,0	0|1:1:0,1,0
+3	16359129	SNP-3.16357775.	C	A	.	PASS	AR2=0.936;DR2=0.952;AF=0.404	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.43:0.076,0.419,0.505	1|1:1.532:0.069,0.33,0.601	1|1:1.777:0.014,0.194,0.792	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.099:0.904,0.093,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.093:0.908,0.09,0.002	0|0:0:1,0,0	0|1:1.182:0.075,0.668,0.257	0|1:0.988:0.087,0.838,0.075	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.478:0.055,0.412,0.533	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.855:0.006,0.134,0.86	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.686:0.011,0.292,0.697	1|1:1.383:0.115,0.388,0.497	0|0:0:1,0,0	0|0:0.123:0.881,0.116,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.125:0.878,0.118,0.003	0|1:0.829:0.292,0.587,0.121	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.153:0.849,0.149,0.002	0|0:0:1,0,0	0|0:0.108:0.895,0.103,0.003	0|0:0:1,0,0	0|0:0.18:0.829,0.163,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.138:0.867,0.129,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.037:0.964,0.035,0.001	0|0:0.083:0.92,0.078,0.003	0|0:0.041:0.96,0.039,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.988:0.013,0.986,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|1:1.13:0.005,0.859,0.136	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.952:0.057,0.934,0.009	0|0:0.017:0.984,0.016,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.875:0.006,0.113,0.881	0|1:1.37:0.089,0.452,0.459	1|1:1.6:0.049,0.301,0.649	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.672:0.328,0.672,0	0|0:0.2:0.811,0.178,0.011	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.638:0.017,0.327,0.656	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.868:0.005,0.122,0.873	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.134:0.869,0.128,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.581:0.034,0.351,0.615	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.553:0.064,0.319,0.617	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.2:0.811,0.178,0.011	0|0:0.171:0.836,0.157,0.007	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.71:0.024,0.242,0.734	0|0:0.095:0.905,0.095,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.519:0.548,0.386,0.066	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.412:0.625,0.338,0.037	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.102:0.901,0.096,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.2:0.811,0.178,0.011	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.342:0.068,0.522,0.41	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.511:0.525,0.44,0.036	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.2:0.811,0.178,0.011	1|1:2:0,0,1	1|1:1.879:0.004,0.113,0.883	0|0:0:1,0,0	0|0:0.073:0.928,0.07,0.002	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.436:0.593,0.379,0.028	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.2:0.811,0.178,0.011	0|0:0.179:0.83,0.161,0.009	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.07:0.932,0.065,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.067:0.935,0.063,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.2:0.809,0.181,0.01	1|1:1.726:0.009,0.257,0.735	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.149:0.857,0.137,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.274:0.731,0.264,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16359580	SNP-3.16358226.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.396	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0.026:0.975,0.025,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.073:0.003,0.921,0.076	0|1:1:0,1,0	0|1:1.006:0.001,0.993,0.006	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.17:0.831,0.168,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.952,0.048,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	16359798	SNP-3.16358444.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.46	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.979:0,0.021,0.979	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.916:0.005,0.074,0.921	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.619:0.382,0.616,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.984:0,0.015,0.984	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16361579	SNP-3.16360225.	A	G	.	PASS	AR2=0.988;DR2=0.99;AF=0.474	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.934:0.001,0.065,0.935	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.962:0.001,0.036,0.963	1|1:1.944:0.001,0.054,0.945	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.955:0,0.044,0.955	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.29:0.011,0.687,0.301	1|1:2:0,0,1	0|0:0.08:0.92,0.08,0	1|1:1.978:0,0.021,0.978	1|1:1.968:0,0.032,0.968	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.026,0.974	1|0:1.556:0.008,0.427,0.565	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.922:0.001,0.076,0.923	1|1:1.963:0,0.036,0.963	1|1:2:0,0,1	1|1:1.972:0,0.028,0.972	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.97:0,0.029,0.97	1|1:1.941:0.002,0.055,0.943	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0,0.021,0.979	1|1:2:0,0,1	1|1:1.968:0,0.031,0.968	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.971:0,0.028,0.971	1|1:1.922:0.001,0.076,0.923	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.95:0.001,0.048,0.951	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.973:0,0.027,0.973	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.963:0,0.037,0.963	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.965:0,0.034,0.965	1|1:2:0,0,1	1|1:1.94:0.001,0.059,0.94	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.968:0,0.031,0.968	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.975:0,0.024,0.975	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.763:0.012,0.213,0.775	1|1:1.957:0,0.043,0.957	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.757:0.008,0.226,0.765	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.863:0.005,0.127,0.868	0|0:0:1,0,0	1|1:1.968:0,0.031,0.969	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.785:0.007,0.201,0.792	1|1:2:0,0,1	1|1:1.96:0.001,0.039,0.96	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.955:0.001,0.044,0.956	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0.001,0.021,0.978	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.975:0,0.024,0.976	0|0:0:1,0,0	1|1:1.968:0,0.031,0.968	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.026,0.974	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.97:0,0.03,0.97	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.972:0,0.027,0.972	1|1:1.953:0.001,0.046,0.954	0|0:0:1,0,0	0|1:1:0,1,0
+3	16361683	SNP-3.16360329.	A	G	.	PASS	AR2=0.939;DR2=0.961;AF=0.223	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.664:0.367,0.602,0.031	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1.372:0.1,0.428,0.472	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.463:0.075,0.387,0.538	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.213:0.159,0.469,0.372	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.475:0.07,0.386,0.545	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.372:0.1,0.428,0.472	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.57:0.05,0.329,0.621	1|1:1.44:0.079,0.402,0.519	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.294:0.706,0.294,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.406:0.091,0.412,0.497	1|1:1.388:0.092,0.429,0.48	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.35:0.107,0.435,0.457	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.483:0.07,0.376,0.553	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16366254	SNP-3.16383185.	C	A	.	PASS	AR2=0.995;DR2=0.996;AF=0.462	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.948:0.001,0.051,0.948	1|0:1:0,1,0	1|1:1.948:0.001,0.051,0.949	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.936:0.001,0.062,0.937	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.912:0.002,0.083,0.914	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.335:0,0.665,0.335	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.947:0.001,0.051,0.948	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.864:0.007,0.122,0.871	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.918:0.002,0.079,0.92	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.944:0,0.055,0.944	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.926:0.002,0.07,0.928	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.953:0.001,0.045,0.954	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0,0.024,0.976	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.949:0.001,0.05,0.949	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16368468	SNP-3.16380971.	C	A	.	PASS	AR2=0.961;DR2=0.967;AF=0.447	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.059:0.943,0.055,0.002	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.884:0.006,0.104,0.89	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.989:0,0.011,0.989	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.914:0.32,0.446,0.234	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.999:0,0.001,0.999	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.466:0.077,0.379,0.543	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.057:0.945,0.053,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1.023:0.238,0.501,0.261	1|1:1.802:0.004,0.189,0.807	1|1:2:0,0,1	0|1:0.978:0.264,0.495,0.241	1|0:1.466:0.077,0.379,0.543	1|1:2:0,0,1	1|1:1.466:0.077,0.379,0.543	1|1:2:0,0,1	0|0:0.094:0.909,0.087,0.004	1|0:1.001:0.002,0.995,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.443:0.568,0.422,0.01	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0.009:0.991,0.009,0	1|0:0.947:0.279,0.494,0.226	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.926:0.002,0.071,0.927	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	1|0:0.995:0.261,0.482,0.256	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.026:0.263,0.447,0.289	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.079:0.214,0.493,0.293	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|0:0.855:0.339,0.467,0.194	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.466:0.077,0.379,0.543	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.783:0.359,0.498,0.143	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.057:0.945,0.053,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.967:0.26,0.512,0.227	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:1.969:0,0.03,0.969	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16379310	SNP-3.16370129.	C	A	.	PASS	AR2=1;DR2=1;AF=0.424	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.971:0,0.029,0.971	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.952:0.001,0.046,0.953	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.97:0,0.03,0.97	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16394336	SNP-3.16392980.	A	G	.	PASS	AR2=0.889;DR2=0.918;AF=0.379	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.608:0.046,0.299,0.654	1|1:1.59:0.043,0.323,0.633	1|1:1.722:0.039,0.2,0.761	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:1.475:0.044,0.436,0.519	1|1:1.162:0.179,0.48,0.341	1|1:1.514:0.067,0.352,0.581	0|0:0:1,0,0	1|0:1.247:0.109,0.535,0.356	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.011:0.221,0.547,0.232	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.566:0.063,0.308,0.629	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.479:0.068,0.385,0.547	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.343:0.103,0.45,0.447	0|0:0:1,0,0	0|0:0.457:0.6,0.342,0.058	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.481:0.067,0.384,0.549	1|1:1.989:0,0.01,0.989	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.976:0,0.024,0.976	1|1:2:0,0,1	1|0:1.458:0.031,0.48,0.489	0|0:0:1,0,0	1|1:1.479:0.068,0.385,0.547	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.598:0.051,0.301,0.648	1|1:1.481:0.067,0.384,0.549	1|1:1.479:0.068,0.385,0.547	0|0:0:1,0,0	1|1:1.479:0.068,0.385,0.547	1|1:2:0,0,1	1|1:1.483:0.067,0.383,0.55	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.413:0.603,0.382,0.016	0|0:0:1,0,0	0|1:1.216:0.122,0.54,0.338	0|0:0:1,0,0	1|1:1.483:0.067,0.383,0.55	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.662:0.471,0.395,0.134	0|1:0.781:0.343,0.533,0.124	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.477:0.068,0.386,0.545	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.166:0.168,0.498,0.334	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.414:0.106,0.375,0.52	1|1:1.478:0.068,0.385,0.547	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.81:0.023,0.143,0.833	1|1:1.762:0.014,0.211,0.776	1|1:1.283:0.107,0.502,0.391	1|1:2:0,0,1	1|1:1.732:0.002,0.264,0.734	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.481:0.067,0.384,0.548	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.034:0.286,0.394,0.32	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.709:0.024,0.243,0.733	0|0:0:1,0,0	1|1:1.591:0.055,0.299,0.646	1|1:1.589:0.048,0.316,0.637	0|0:0.504:0.572,0.352,0.076	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.723:0.034,0.209,0.757	1|0:1.28:0.094,0.531,0.374	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.326:0.046,0.581,0.372	1|1:1.481:0.067,0.384,0.549	0|0:0:1,0,0	1|1:1.623:0.054,0.269,0.677	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.392:0.091,0.426,0.483	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.702:0.03,0.238,0.732	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.478:0.068,0.385,0.547	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.48:0.068,0.385,0.548	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.907:0.305,0.482,0.213	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16399536	SNP-3.16398180.	C	A	.	PASS	AR2=1;DR2=1;AF=0.465	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16399742	SNP-3.16398386.	A	G	.	PASS	AR2=0.983;DR2=0.986;AF=0.259	GT:DS:GP	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.086:0.917,0.081,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.657:0.032,0.279,0.689	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.154:0.853,0.141,0.006	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.878:0.004,0.114,0.882	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.056:0.945,0.054,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.025:0.975,0.024,0	1|0:1:0,1,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.5:0.591,0.319,0.091	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0.235:0.8,0.166,0.035	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.965:0,0.035,0.965	1|1:1.963:0.001,0.035,0.964	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.185:0.825,0.165,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.136:0.872,0.12,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.095:0.908,0.089,0.003	0|0:0:1,0,0	0|0:0.089:0.913,0.085,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.212:0.798,0.192,0.01	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.881:0.002,0.116,0.883	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.063:0.939,0.059,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.941,0.057,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1
+3	16400147	SNP-3.16398791.	A	G	.	PASS	AR2=0.989;DR2=0.991;AF=0.489	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.984:0,0.016,0.984	1|1:1.952:0.002,0.045,0.953	1|1:1.783:0.009,0.199,0.792	1|1:1.915:0.003,0.079,0.918	1|1:1.656:0.037,0.269,0.694	0|0:0:1,0,0	1|1:1.632:0.013,0.342,0.645	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:1.957:0.001,0.042,0.958	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.967:0,0.033,0.967	1|1:1.979:0,0.021,0.979	1|1:1.737:0.018,0.227,0.755	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.005,0.995	1|1:1.892:0.007,0.094,0.899	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.755:0.015,0.214,0.77	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.875:0,0.124,0.875	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.944:0.001,0.054,0.945	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.862:0,0.137,0.863	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.934:0.001,0.065,0.935	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.962:0.001,0.037,0.962	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.737:0.018,0.228,0.755	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16400449	SNP-3.16399093.	A	G	.	PASS	AR2=0.95;DR2=0.964;AF=0.257	GT:DS:GP	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0.395:0.644,0.317,0.039	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0.112:0.893,0.102,0.005	0|0:0.016:0.985,0.015,0	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:1.847:0.001,0.152,0.848	1|1:1.966:0,0.034,0.966	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.964:0.001,0.034,0.965	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.044:0.957,0.043,0.001	1|1:2:0,0,1	1|1:1.962:0.001,0.035,0.963	1|1:1.935:0.001,0.062,0.937	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.394:0.645,0.316,0.039	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.394:0.645,0.316,0.039	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.673:0.458,0.41,0.132	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.129:0.872,0.127,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.318:0.713,0.256,0.031	0|0:0.394:0.645,0.316,0.039	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.098:0.908,0.086,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.032:0.968,0.031,0.001	0|0:0.354:0.646,0.354,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.965:0.217,0.601,0.182	0|0:0.077:0.924,0.076,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.96,0.04,0	0|0:0.436:0.615,0.335,0.05	0|0:0:1,0,0	0|0:0.435:0.615,0.335,0.05	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0.073:0.927,0.073,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.394:0.645,0.316,0.039	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.239:0.766,0.23,0.005	0|0:0.409:0.633,0.325,0.042	0|0:0:1,0,0	0|0:0.394:0.645,0.316,0.039	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.394:0.645,0.316,0.039	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.396:0.643,0.318,0.039	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.249:0.768,0.214,0.017	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.043:0.958,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.394:0.645,0.316,0.039	1|1:2:0,0,1	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.86:0.001,0.138,0.861	0|0:0:1,0,0	1|1:2:0,0,1
+3	16400652	SNP-3.16399296.	C	A	.	PASS	AR2=0.984;DR2=0.988;AF=0.481	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:1.967:0,0.032,0.967	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.184:0.827,0.163,0.01	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.959:0,0.041,0.959	0|0:0.208:0.801,0.189,0.009	0|0:0.248:0.758,0.237,0.005	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.085:0.917,0.081,0.002	1|1:1.866:0.008,0.118,0.874	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.515:0.052,0.381,0.567	1|1:2:0,0,1	1|1:1.794:0.002,0.202,0.796	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.342:0.688,0.281,0.03	0|0:0:1,0,0	0|0:0.072:0.929,0.069,0.001	0|0:0.013:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.249:0.764,0.222,0.014	1|1:1.983:0,0.017,0.983	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.129:0.875,0.12,0.004	0|0:0.361:0.664,0.311,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.988,0.012,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.962,0.036,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.939:0,0.061,0.939	1|1:1.962:0.002,0.034,0.964	0|0:0.121:0.883,0.113,0.004	0|0:0:1,0,0	0|0:0.227:0.784,0.205,0.011	1|1:1.828:0,0.172,0.828	0|0:0:1,0,0
+3	16400670	SNP-3.16399314.	C	A	.	PASS	AR2=0.993;DR2=0.995;AF=0.448	GT:DS:GP	1|1:1.907:0,0.093,0.907	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:1.995:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.935:0,0.065,0.935	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.69:0.039,0.232,0.729	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.831:0.001,0.167,0.832	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|0:1.339:0.074,0.513,0.413	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.96,0.04,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:1.983:0,0.016,0.984	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.69:0.039,0.232,0.729	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16400718	SNP-3.16399362.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.429	GT:DS:GP	1|1:2:0,0,1	1|1:1.979:0,0.021,0.979	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.969:0,0.03,0.97	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.979:0,0.021,0.979	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.969:0,0.03,0.969	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0,0.021,0.979	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.019,0.98	1|1:2:0,0,1	1|1:1.983:0,0.016,0.983	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.05:0.95,0.05,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.175:0.833,0.158,0.008	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.973:0,0.027,0.973	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.984:0,0.016,0.984	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.101:0.902,0.094,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.633:0.002,0.364,0.634	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	16401184	SNP-3.16399828.	C	A	.	PASS	AR2=0.986;DR2=0.988;AF=0.41	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.969:0.001,0.03,0.969	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	1|1:1.967:0.001,0.032,0.967	0|0:0:1,0,0	1|1:1.96:0.001,0.038,0.961	1|1:1.953:0.001,0.045,0.954	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.89:0.003,0.104,0.893	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.812:0.003,0.181,0.816	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.619:0.084,0.213,0.703	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.896:0.003,0.097,0.9	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.976:0,0.024,0.976	1|1:1.955:0.001,0.043,0.956	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.97:0,0.03,0.97	1|1:1.881:0.001,0.118,0.881	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.897:0,0.103,0.897	1|1:1.96:0.001,0.038,0.961	1|1:2:0,0,1	1|1:1.963:0.001,0.035,0.964	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	0|0:0:1,0,0	0|1:0.966:0.034,0.966,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.97:0,0.029,0.97	0|0:0:1,0,0	1|1:1.964:0.001,0.034,0.965	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.902:0.004,0.09,0.906	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.79:0.001,0.207,0.791	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.974:0,0.025,0.974	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.97:0,0.03,0.97	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.72:0.027,0.226,0.747	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.752:0.008,0.232,0.76	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.899:0.003,0.096,0.901	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.245:0.043,0.67,0.287	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.823:0.193,0.791,0.016	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.973:0,0.027,0.973	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0,0.024,0.975	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.975:0,0.025,0.975	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16407522	SNP-3.16406166.	C	A	.	PASS	AR2=0.998;DR2=0.999;AF=0.264	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.751:0.019,0.21,0.771	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16410397	SNP-3.16409041.	A	G	.	PASS	AR2=0.942;DR2=0.956;AF=0.496	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.931:0.002,0.065,0.933	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.208:0.148,0.497,0.355	1|0:1.073:0.226,0.474,0.299	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.922:0.003,0.072,0.925	0|0:0:1,0,0	1|0:1.27:0.087,0.556,0.357	1|1:2:0,0,1	1|1:1.645:0.034,0.286,0.679	1|1:1.863:0.006,0.125,0.869	1|0:1.4:0.021,0.558,0.421	0|1:1.412:0.019,0.55,0.431	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.673:0.026,0.276,0.698	1|0:1.459:0.067,0.406,0.526	1|1:1.092:0.206,0.497,0.297	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.933:0.002,0.064,0.934	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.924:0.002,0.072,0.926	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.637:0.033,0.296,0.671	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.693:0.01,0.287,0.703	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.924:0.002,0.072,0.926	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.651:0.031,0.288,0.682	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.803:0.01,0.177,0.813	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.947:0.001,0.051,0.948	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.87:0.004,0.123,0.873	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.887:0.007,0.099,0.894	0|1:1.157:0.161,0.52,0.319	1|0:1.581:0.034,0.351,0.615	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.92:0.002,0.077,0.921	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.313:0.136,0.416,0.449	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.445:0.083,0.389,0.528	1|1:1.728:0.01,0.252,0.738	1|1:2:0,0,1	1|0:1.303:0.106,0.485,0.409	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.922:0.002,0.075,0.923	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.914:0.002,0.082,0.916	1|0:1.32:0.078,0.524,0.398	0|0:0:1,0,0	1|1:1.52:0.041,0.399,0.56	1|0:1.064:0.216,0.505,0.279	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.922:0.002,0.075,0.923	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.637:0.033,0.296,0.671	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.919:0.002,0.078,0.921	1|1:1.73:0.001,0.268,0.731	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.822:0.008,0.162,0.83	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.821:0.008,0.163,0.829	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.519:0.063,0.354,0.583	0|0:0:1,0,0	1|0:1.407:0.019,0.554,0.426
+3	16411046	SNP-3.16409690.	C	A	.	PASS	AR2=0.99;DR2=0.993;AF=0.478	GT:DS:GP	1|1:1.911:0.001,0.086,0.912	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.961:0.001,0.038,0.962	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.036,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	1|1:1.327:0.123,0.427,0.45	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0.123:0.885,0.107,0.008	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.804:0.007,0.182,0.811	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.854:0.006,0.134,0.86	1|1:1.905:0.003,0.089,0.908	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.872:0.009,0.11,0.881	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.812:0.009,0.169,0.822	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.925:0.001,0.074,0.926	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.919:0.002,0.076,0.921	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.192:0.809,0.19,0.001	1|1:2:0,0,1	0|0:0:1,0,0
+3	16412003	SNP-3.16410647.	C	A	.	PASS	AR2=0.991;DR2=0.992;AF=0.28	GT:DS:GP	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.891:0.001,0.106,0.893	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.116:0.887,0.11,0.003	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.94,0.059,0.001	0|0:0:1,0,0	0|0:0.243:0.758,0.241,0.001	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.751:0.021,0.206,0.772	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.02,0	0|0:0:1,0,0	0|0:0.06:0.941,0.058,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.267:0.756,0.222,0.022	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.909:0.002,0.087,0.911	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.062:0.938,0.062,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.013:0.987,0.013,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.023:0.977,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.111:0.892,0.105,0.003	0|0:0.208:0.795,0.202,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16414648	SNP-3.16413292.	C	A	.	PASS	AR2=0.991;DR2=0.994;AF=0.474	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.127:0.877,0.119,0.004	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.286:0.716,0.283,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.956,0.044,0.001	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:0.62:0.541,0.298,0.161	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.123:0.88,0.117,0.003	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.032:0.968,0.032,0	0|0:0:1,0,0	0|0:0.393:0.647,0.313,0.04	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.035:0.965,0.034,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16415105	SNP-3.16413749.	A	G	.	PASS	AR2=0.882;DR2=0.905;AF=0.396	GT:DS:GP	0|0:0.218:0.785,0.212,0.003	0|0:0:1,0,0	0|0:0.25:0.776,0.198,0.026	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.696:0.023,0.258,0.719	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.95,0.049,0.001	1|1:2:0,0,1	0|1:1.006:0.218,0.558,0.224	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.292:0.125,0.457,0.418	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.923:0.246,0.586,0.169	1|1:1.381:0.098,0.424,0.478	0|1:0.554:0.519,0.408,0.073	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.02:0.244,0.492,0.264	0|0:0:1,0,0	0|0:0.602:0.485,0.429,0.087	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.238:0.125,0.512,0.363	0|0:0.495:0.555,0.394,0.05	0|1:0.892:0.255,0.597,0.147	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.029:0.233,0.506,0.262	0|1:1.319:0.106,0.47,0.424	1|1:1.066:0.217,0.5,0.283	1|0:1.309:0.12,0.451,0.429	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.696:0.023,0.258,0.719	1|1:1.696:0.023,0.258,0.719	1|1:2:0,0,1	0|0:0.212:0.813,0.162,0.025	0|1:0.713:0.386,0.515,0.099	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.696:0.023,0.258,0.719	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.331:0.079,0.511,0.41	1|1:1.696:0.023,0.258,0.719	1|1:2:0,0,1	1|1:1.696:0.023,0.258,0.719	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.693:0.024,0.26,0.717	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.727:0.018,0.237,0.745	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.696:0.023,0.258,0.719	1|1:2:0,0,1	1|1:1.206:0.118,0.558,0.324	1|1:1.693:0.024,0.26,0.716	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.001:0.243,0.514,0.244	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.35:0.077,0.496,0.427	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.539:0.048,0.365,0.587	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.934,0.061,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:1.031:0.238,0.494,0.268	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.974:0.223,0.58,0.197	1|1:1.277:0.128,0.466,0.406	1|0:0.686:0.405,0.505,0.091	1|1:2:0,0,1	0|0:1.02:0.244,0.492,0.264	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.209:0.82,0.151,0.029	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.924:0.237,0.602,0.161	1|1:2:0,0,1	0|1:1.106:0.185,0.525,0.291	1|1:2:0,0,1	0|1:0.44:0.619,0.322,0.059	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.337:0.691,0.281,0.028	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.338:0.109,0.443,0.448	0|1:0.913:0.259,0.568,0.173	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.027:0.974,0.025,0.001	0|1:0.544:0.459,0.538,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.629:0.033,0.304,0.663	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.693:0.024,0.26,0.717	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.972:0.268,0.493,0.24	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.972:0.268,0.493,0.24	0|0:0:1,0,0	1|0:0.616:0.482,0.42,0.098	0|1:0.968:0.267,0.498,0.235	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.441:0.621,0.317,0.062	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.696:0.023,0.258,0.719	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.426:0.053,0.469,0.478	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.97:0.266,0.498,0.236	0|0:0:1,0,0	0|0:0.067:0.935,0.063,0.002	0|0:0:1,0,0
+3	16417170	SNP-3.16415814.	A	G	.	PASS	AR2=0.993;DR2=0.996;AF=0.438	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.844:0.006,0.143,0.85	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.341:0.109,0.442,0.449	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.938:0.077,0.909,0.014	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.938:0.077,0.909,0.014	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.939:0.077,0.908,0.016	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0
+3	16417403	SNP-3.16416047.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.385	GT:DS:GP	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.965:0,0.035,0.965	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.774:0.014,0.198,0.788	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.105:0.205,0.485,0.31	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16417511	SNP-3.16416155.	A	G	.	PASS	AR2=0.993;DR2=0.995;AF=0.448	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.242:0.005,0.748,0.247	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.003:0,0.997,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1.149:0.006,0.84,0.155	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1.189:0.005,0.801,0.194	1|1:1.444:0.077,0.401,0.522	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1.003:0.001,0.996,0.003	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.004:0,0.996,0.004	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1.163:0.005,0.826,0.169	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0
+3	16417802	SNP-3.16416446.	C	A	.	PASS	AR2=0.997;DR2=0.997;AF=0.423	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.97:0,0.03,0.97	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.062:0.939,0.061,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.796:0.009,0.185,0.805	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.762:0.013,0.211,0.776	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.905:0.003,0.089,0.908	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.969:0,0.03,0.97	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16419503	SNP-3.16418147.	C	A	.	PASS	AR2=0.941;DR2=0.957;AF=0.322	GT:DS:GP	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.908:0.004,0.085,0.912	0|0:0:1,0,0	1|1:1.897:0.004,0.095,0.901	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.152:0.168,0.513,0.319	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.34:0.109,0.442,0.449	0|0:0.43:0.582,0.407,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.055:0.235,0.476,0.29	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.218:0.025,0.733,0.242	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.928:0.003,0.066,0.931	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.799:0.012,0.177,0.811	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.707:0.293,0.707,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.568:0.015,0.402,0.583	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.373:0.1,0.427,0.473	1|1:1.925:0.003,0.068,0.928	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.896:0.004,0.096,0.9	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.324:0.116,0.444,0.44	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.083:0.128,0.662,0.21	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.752:0.015,0.218,0.767	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.915:0.005,0.075,0.92	0|0:0:1,0,0	0|1:1.345:0.113,0.429,0.458	0|0:0:1,0,0	1|0:1.358:0.107,0.428,0.465	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.092:0.172,0.564,0.264	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.573:0.078,0.271,0.651	0|1:1.211:0.133,0.523,0.344	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.541:0.07,0.32,0.61	1|1:1.617:0.036,0.311,0.653	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.365:0.652,0.331,0.017	0|0:0:1,0,0	0|0:0.152:0.861,0.126,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.451:0.583,0.382,0.034	0|0:0:1,0,0	0|0:0.211:0.802,0.186,0.013	1|1:1.668:0.023,0.286,0.691	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.959:0.001,0.038,0.96	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.728:0.047,0.179,0.774	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.153:0.86,0.127,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16420292	SNP-3.16418936.	C	A	.	PASS	AR2=0.974;DR2=0.983;AF=0.379	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1.388:0.095,0.422,0.483	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.328:0.11,0.452,0.438	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.558:0.046,0.349,0.605	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1.4:0.074,0.452,0.474	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.457:0.076,0.392,0.533	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.341:0.11,0.44,0.451	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.455:0.076,0.393,0.531	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.285:0.132,0.451,0.417	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.644:0.037,0.283,0.681	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16421225	SNP-3.16419869.	A	G	.	PASS	AR2=1;DR2=1;AF=0.216	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16422830	SNP-3.16421474.	C	A	.	PASS	AR2=1;DR2=1;AF=0.259	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16425653	SNP-3.16424297.	C	A	.	PASS	AR2=1;DR2=1;AF=0.449	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16427008	SNP-3.16425652.	C	A	.	PASS	AR2=0.999;DR2=1;AF=0.479	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:1.952:0.001,0.047,0.953	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.97:0,0.03,0.97	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.959,0.04,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16428179	SNP-3.16426823.	C	A	.	PASS	AR2=1;DR2=1;AF=0.488	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16431723	SNP-3.16430367.	A	G	.	PASS	AR2=0.985;DR2=0.988;AF=0.456	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.948:0.001,0.05,0.949	0|0:0:1,0,0	1|1:1.586:0.045,0.324,0.631	1|1:2:0,0,1	1|1:1.848:0.008,0.137,0.856	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.614:0.01,0.365,0.624	1|1:1.641:0.015,0.328,0.656	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.812:0.009,0.17,0.821	1|0:1:0,1,0	1|1:1.813:0.009,0.17,0.822	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.812:0.009,0.17,0.821	1|1:1.859:0.002,0.136,0.861	1|1:1.931:0.002,0.066,0.932	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.835:0.001,0.162,0.837	1|1:2:0,0,1	1|1:1.812:0.009,0.17,0.821	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.757:0.014,0.215,0.771	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.804:0.006,0.184,0.81	1|1:1.821:0.009,0.162,0.83	1|1:1.793:0.01,0.186,0.804	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.973:0.001,0.026,0.973	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.976:0,0.023,0.977	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16432162	SNP-3.16430806.	C	A	.	PASS	AR2=1;DR2=1;AF=0.49	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16433028	SNP-3.16431672.	C	A	.	PASS	AR2=1;DR2=1;AF=0.434	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16437602	SNP-3.16436246.	A	G	.	PASS	AR2=1;DR2=1;AF=0.216	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16439107	SNP-3.16437751.	C	A	.	PASS	AR2=0.979;DR2=0.982;AF=0.478	GT:DS:GP	1|1:2:0,0,1	1|1:1.922:0.001,0.077,0.923	1|1:1.802:0.009,0.181,0.811	1|1:2:0,0,1	1|1:1.899:0.003,0.094,0.903	1|1:2:0,0,1	1|1:1.876:0.005,0.114,0.881	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.124:0.879,0.117,0.004	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	1|0:1:0,1,0	0|0:0.303:0.718,0.261,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.173:0.836,0.155,0.009	1|1:2:0,0,1	0|0:0.075:0.927,0.07,0.003	0|0:0.072:0.931,0.066,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.944,0.053,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.979:0,0.021,0.979	1|1:2:0,0,1	1|1:1.851:0.003,0.143,0.854	1|1:2:0,0,1	1|1:1.952:0.001,0.046,0.953	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.171:0.835,0.16,0.006	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.939:0.001,0.059,0.94	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.169:0.841,0.148,0.01	0|1:1:0,1,0	0|0:0.195:0.815,0.176,0.01	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.08:0.923,0.073,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.093:0.911,0.085,0.004	0|0:0.151:0.856,0.138,0.007	0|0:0.096:0.906,0.092,0.002	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.7:0.008,0.284,0.708	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.076:0.927,0.07,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.112:0.891,0.106,0.003	1|1:1.981:0,0.018,0.982	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.98:0,0.019,0.981	0|0:0:1,0,0	0|0:0.378:0.643,0.337,0.02	0|0:0.138:0.867,0.129,0.004	0|0:0:1,0,0	0|0:0.163:0.844,0.15,0.006	0|0:0.167:0.842,0.148,0.01	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.775:0.015,0.194,0.791	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.338:0.69,0.282,0.028	0|0:0:1,0,0	0|0:0.1:0.902,0.097,0.002	1|1:1.901:0.003,0.093,0.904	0|0:0:1,0,0
+3	16440472	SNP-3.16439116.	C	A	.	PASS	AR2=1;DR2=1;AF=0.463	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16442247	SNP-3.16440891.	A	G	.	PASS	AR2=0.967;DR2=0.976;AF=0.413	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.516:0.069,0.347,0.584	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.767:0.016,0.202,0.783	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1.626:0.017,0.341,0.642	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.788:0.009,0.194,0.797	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.818:0.009,0.163,0.827	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.204:0.156,0.484,0.36	1|1:1.482:0.058,0.402,0.54	1|1:1.494:0.054,0.398,0.548	0|1:1:0,1,0	1|1:1.772:0.012,0.204,0.784	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.737:0.015,0.232,0.752	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.573:0.045,0.337,0.618	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.953:0.001,0.045,0.954	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.84:0.013,0.133,0.854	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.543:0.041,0.375,0.584	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1.007:0.234,0.526,0.241	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.542:0.052,0.353,0.595	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.542:0.053,0.353,0.594	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.953:0.001,0.046,0.954	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16442748	SNP-3.16441392.	A	G	.	PASS	AR2=0.988;DR2=0.992;AF=0.2	GT:DS:GP	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.094:0.908,0.09,0.002	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.057:0.943,0.057,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.954,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.191:0.813,0.184,0.003	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.142:0.862,0.134,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.946,0.053,0.001	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.43:0.576,0.418,0.006	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.583:0.503,0.412,0.085	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16444005	SNP-3.16442649.	C	A	.	PASS	AR2=0.942;DR2=0.954;AF=0.416	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.073:0.929,0.068,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:1.133:0.19,0.488,0.322	0|1:0.412:0.597,0.393,0.009	0|0:0:1,0,0	0|0:0.303:0.719,0.259,0.022	0|0:0.135:0.87,0.124,0.005	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.27:0.755,0.22,0.025	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.016:0.984,0.016,0	1|1:1.522:0.043,0.392,0.565	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.955,0.044,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.134:0.869,0.128,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.944,0.055,0.001	1|1:2:0,0,1	0|0:0.116:0.887,0.11,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.202:0.818,0.162,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.944,0.056,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.161:0.846,0.148,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.264:0.748,0.241,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.931,0.068,0.001	0|0:0.287:0.739,0.236,0.026	0|0:0:1,0,0	0|0:0.057:0.944,0.055,0.001	0|0:0:1,0,0	0|0:0.153:0.859,0.128,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.378:0.654,0.314,0.032	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	0|0:0.05:0.951,0.049,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.902:0.005,0.087,0.907	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.751:0.015,0.219,0.766	1|0:1.201:0.147,0.506,0.348	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.416:0.105,0.374,0.521	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.739:0.004,0.254,0.742	1|0:0.363:0.646,0.344,0.009	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.915:0.004,0.077,0.919	1|1:2:0,0,1	1|1:1.938:0,0.061,0.938	1|1:2:0,0,1	1|1:1.688:0.026,0.26,0.714	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.278:0.745,0.231,0.024	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.78:0.37,0.481,0.15	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.739:0.019,0.223,0.758	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.261:0.746,0.247,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.911:0.299,0.492,0.21	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.489:0.657,0.197,0.146	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.294:0.722,0.263,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.078:0.923,0.076,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.26:0.763,0.213,0.024	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.165:0.842,0.152,0.007	0|0:0.104:0.899,0.099,0.002	1|1:2:0,0,1	0|0:0.05:0.951,0.049,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.34:0.67,0.321,0.009	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.798:0.013,0.177,0.81	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.135:0.186,0.493,0.321	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.571:0.069,0.291,0.64	1|1:2:0,0,1	1|1:1.877:0.003,0.118,0.88	1|1:1.465:0.117,0.302,0.582	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.291:0.734,0.241,0.025	1|1:2:0,0,1	0|0:0.012:0.988,0.012,0	0|0:0.003:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0
+3	16444551	SNP-3.16443195.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.208	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.805:0.002,0.191,0.807	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16444877	SNP-3.16443521.	C	A	.	PASS	AR2=0.986;DR2=0.988;AF=0.303	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.083:0.921,0.076,0.003	0|0:0.22:0.783,0.214,0.003	0|0:0:1,0,0	0|0:0.093:0.911,0.085,0.004	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.028:0.972,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.018:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.094:0.909,0.089,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.001,0.998	1|1:2:0,0,1	0|0:0.106:0.901,0.093,0.006	0|0:0.073:0.93,0.068,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.032:0.968,0.032,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.079:0.923,0.076,0.002	0|0:0.054:0.946,0.054,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|1:1.051:0.218,0.512,0.269	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.864:0.326,0.484,0.19	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.617:0.501,0.381,0.118	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.024,0	0|0:0:1,0,0	0|0:0.08:0.922,0.076,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.022,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.082:0.923,0.073,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.003:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0
+3	16445595	SNP-3.16444239.	C	A	.	PASS	AR2=0.993;DR2=0.994;AF=0.482	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.015:0.985,0.015,0	1|1:1.939:0.001,0.058,0.94	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.262:0.744,0.25,0.006	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.142:0.861,0.136,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.975,0.025,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.134:0.058,0.749,0.193	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.088:0.915,0.083,0.002	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.024:0.977,0.023,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.292:0.71,0.288,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.09:0.91,0.089,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.117:0.887,0.109,0.004	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.203:0.798,0.202,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.033:0.968,0.031,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.089:0.914,0.084,0.003	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16445816	SNP-3.16444460.	A	G	.	PASS	AR2=0.915;DR2=0.935;AF=0.369	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.251:0.163,0.423,0.414	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1.133:0.169,0.529,0.302	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.548:0.056,0.34,0.604	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.522:0.059,0.36,0.581	1|1:1.318:0.118,0.445,0.436	1|1:1.526:0.042,0.39,0.568	0|0:1.121:0.165,0.549,0.286	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.434:0.072,0.423,0.505	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.64:0.024,0.311,0.665	1|1:1.657:0.031,0.282,0.687	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.727:0.019,0.234,0.746	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.283:0.13,0.456,0.413	1|1:2:0,0,1	1|1:1.283:0.127,0.462,0.411	1|1:2:0,0,1	1|0:1.127:0.192,0.489,0.319	1|1:1.728:0.019,0.234,0.747	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.698:0.023,0.255,0.721	0|0:0:1,0,0	1|1:1.748:0.016,0.22,0.764	1|1:1.714:0.021,0.245,0.734	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.729:0.019,0.233,0.748	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.731:0.019,0.231,0.75	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.586:0.065,0.284,0.651	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.652:0.02,0.309,0.672	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.299:0.084,0.532,0.383	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.731:0.019,0.231,0.75	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.284:0.127,0.462,0.411	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.279:0.128,0.465,0.407	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.292:0.083,0.543,0.375	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.7:0.044,0.211,0.744	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.485:0.07,0.375,0.555	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.423:0.08,0.418,0.503	0|0:0:1,0,0	1|0:1.089:0.178,0.555,0.267	0|1:1.433:0.081,0.406,0.513	1|1:1.731:0.019,0.231,0.75	1|1:1.451:0.104,0.341,0.555	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.44:0.048,0.464,0.488	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.738:0.018,0.227,0.755	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.108:0.896,0.101,0.003	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.725:0.019,0.236,0.745	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.773:0.021,0.185,0.794	1|1:2:0,0,1	1|1:1.347:0.103,0.446,0.45	0|0:0:1,0,0	1|1:2:0,0,1
+3	16447361	SNP-3.16446005.	A	G	.	PASS	AR2=1;DR2=1;AF=0.216	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16450518	SNP-3.16449162.	A	G	.	PASS	AR2=0.985;DR2=0.987;AF=0.244	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.164:0.842,0.151,0.006	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.065:0.939,0.058,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.023:0.977,0.022,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.944,0.056,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	1|1:1.864:0.005,0.126,0.869	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.172:0.835,0.157,0.008	1|1:1.989:0,0.011,0.989	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.969:0.001,0.029,0.97	1|1:1.743:0.008,0.241,0.751	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.036:0.964,0.036,0	0|1:1.025:0.039,0.897,0.064	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.789:0.241,0.728,0.031	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.113:0.891,0.106,0.003	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.967:0.001,0.031,0.968	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.053:0.947,0.053,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.649:0.014,0.323,0.663	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.969:0.001,0.029,0.97	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.923,0.074,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.948:0.001,0.05,0.949	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.922:0.002,0.074,0.924	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.868:0.005,0.122,0.873	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16452818	SNP-3.16451462.	A	G	.	PASS	AR2=0.943;DR2=0.96;AF=0.24	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.822:0.008,0.161,0.83	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.876:0.004,0.116,0.88	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.888:0.003,0.107,0.891	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.42:0.09,0.4,0.51	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.443:0.606,0.345,0.049	0|0:0.297:0.726,0.251,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.448:0.602,0.347,0.05	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.841:0,0.159,0.841	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.443:0.606,0.344,0.049	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.438:0.61,0.342,0.048	0|0:0:1,0,0	0|0:0.444:0.606,0.345,0.049	0|0:0:1,0,0	0|0:0.432:0.615,0.338,0.047	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.861:0.005,0.129,0.866	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1.495:0.066,0.373,0.561	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.749:0.018,0.216,0.766	1|1:1.87:0.005,0.121,0.874	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.443:0.606,0.345,0.049	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.435:0.612,0.34,0.048	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.449:0.601,0.348,0.051	0|1:0.898:0.247,0.607,0.145	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.422:0.623,0.332,0.045	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.407:0.635,0.323,0.042	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.322:0.705,0.269,0.027	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16454535	SNP-3.16453179.	A	G	.	PASS	AR2=0.954;DR2=0.962;AF=0.228	GT:DS:GP	0|0:0.134:0.869,0.128,0.003	0|0:0.11:0.89,0.109,0	0|0:0:1,0,0	0|0:0.044:0.956,0.044,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.768:0.382,0.468,0.15	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.904:0.002,0.092,0.906	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.939:0.001,0.058,0.941	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.926:0.002,0.07,0.928	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.426:0.606,0.361,0.032	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.912:0.001,0.086,0.913	1|1:2:0,0,1	1|1:1.962:0.001,0.037,0.963	1|0:1.125:0.139,0.596,0.265	0|0:0:1,0,0	1|1:1.954:0.001,0.045,0.954	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.045:0.955,0.045,0	0|0:0:1,0,0	1|1:1.94:0.001,0.058,0.941	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.801:0.35,0.499,0.151	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.565:0.53,0.376,0.095	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.205:0.8,0.194,0.006	0|0:0:1,0,0	0|0:0.159:0.842,0.158,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.096:0.91,0.083,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.27:0.134,0.463,0.403	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.091:0.209,0.49,0.3	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.741:0.019,0.222,0.76	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:1.883:0.004,0.11,0.887	1|1:2:0,0,1	1|1:1.935:0.001,0.063,0.936	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.177:0.832,0.16,0.009	0|1:1.203:0.017,0.763,0.22	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.854:0.328,0.491,0.182	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.406:0.657,0.281,0.063	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.554:0.568,0.31,0.122	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.955,0.043,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.767:0.016,0.202,0.782	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16461364	SNP-3.16460008.	A	G	.	PASS	AR2=0.974;DR2=0.982;AF=0.394	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.993,0.007,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.693:0.028,0.252,0.72	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.564:0.057,0.322,0.621	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.45:0.077,0.397,0.526	1|1:1.693:0.02,0.267,0.713	1|0:1:0,1,0	1|1:1.553:0.046,0.354,0.6	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.946:0.001,0.053,0.947	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1.496:0.065,0.375,0.56	1|1:1.393:0.091,0.425,0.484	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.651:0.049,0.25,0.7	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.572:0.044,0.34,0.616	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.641:0.031,0.296,0.672	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.921:0.001,0.077,0.922	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.809:0.017,0.157,0.826	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.97,0.03,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.975:0,0.024,0.975	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16462377	SNP-3.16461021.	A	G	.	PASS	AR2=0.945;DR2=0.956;AF=0.239	GT:DS:GP	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.783:0.002,0.213,0.785	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.11:0.894,0.102,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.001:0.25,0.498,0.252	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.148:0.857,0.137,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.96,0.04,0	0|0:0:1,0,0	1|1:0.987:0.257,0.498,0.244	0|0:0:1,0,0	0|0:0.046:0.955,0.045,0.001	0|1:0.938:0.226,0.611,0.164	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.261:0.759,0.222,0.02	0|1:0.612:0.432,0.524,0.044	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.962:0.27,0.498,0.232	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.672:0.442,0.445,0.113	0|0:0:1,0,0	0|0:0.222:0.782,0.214,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.065:0.94,0.055,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.4:0.636,0.328,0.036	0|0:0:1,0,0	0|0:0.798:0.363,0.477,0.161	0|0:0.044:0.956,0.044,0	0|0:0:1,0,0	0|0:0.227:0.787,0.199,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.297:0.727,0.249,0.024	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.094:0.908,0.091,0.001	1|1:1.99:0,0.01,0.99	1|0:1.521:0,0.478,0.522	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.825:0.346,0.482,0.171	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.589:0,0.411,0.589	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.103:0.897,0.103,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.111:0.892,0.106,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.677:0.438,0.447,0.115	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.592:0.488,0.431,0.081	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.336:0.7,0.264,0.036	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.388:0.094,0.424,0.482	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16463564	SNP-3.16462208.	A	G	.	PASS	AR2=1;DR2=1;AF=0.451	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16464250	SNP-3.16462894.	C	A	.	PASS	AR2=0.982;DR2=0.986;AF=0.353	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.245:0.766,0.223,0.011	0|0:0:1,0,0	0|0:0.158:0.848,0.145,0.006	0|0:0.139:0.866,0.129,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.119:0.198,0.486,0.317	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.145:0.86,0.136,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.045:0.955,0.045,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.064:0.937,0.062,0.001	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.706:0.02,0.253,0.727	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.714:0.022,0.243,0.736	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.971,0.028,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.954,0.046,0.001	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.499:0.049,0.403,0.548	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.534:0.049,0.368,0.583	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.002:0.258,0.483,0.26	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16464819	SNP-3.16463463.	C	A	.	PASS	AR2=0.977;DR2=0.985;AF=0.345	GT:DS:GP	0|1:1:0,1,0	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:1.983:0,0.017,0.983	1|0:1:0,1,0	0|0:0:1,0,0	0|1:0.555:0.494,0.457,0.049	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.599:0.491,0.418,0.09	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.541:0.081,0.297,0.622	0|0:0:1,0,0	0|0:0.563:0.516,0.406,0.079	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.264:0.754,0.229,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.258:0.759,0.224,0.017	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.665:0.367,0.6,0.032	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.978:0,0.021,0.978	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.215:0.789,0.208,0.004	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.18:0.842,0.136,0.022	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.157:0.849,0.145,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.442:0.607,0.344,0.049	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16465142	SNP-3.16463786.	A	G	.	PASS	AR2=1;DR2=1;AF=0.222	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.045:0.956,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16465232	SNP-3.16463876.	A	G	.	PASS	AR2=0.917;DR2=0.943;AF=0.26	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.701:0.023,0.253,0.724	1|1:1.74:0.016,0.227,0.756	0|1:1:0,1,0	1|1:1.773:0.013,0.201,0.786	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.743:0.015,0.227,0.758	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.078:0.924,0.075,0.002	0|1:1.574:0.051,0.325,0.625	1|1:2:0,0,1	1|1:1.816:0.006,0.171,0.823	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.649:0.031,0.288,0.68	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.836:0.007,0.151,0.842	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.496:0.566,0.372,0.062	1|0:1:0,1,0	0|0:0.506:0.558,0.378,0.064	0|0:0.505:0.559,0.377,0.064	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.504:0.56,0.377,0.063	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.504:0.56,0.377,0.063	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.499:0.564,0.373,0.063	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:0.495:0.566,0.372,0.062	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.504:0.56,0.377,0.063	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.94,0.059,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.067:0.934,0.064,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.031:0.969,0.031,0	0|0:0:1,0,0	0|0:0.071:0.93,0.069,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.504:0.56,0.377,0.063	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.937,0.062,0.001	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.804:0.01,0.175,0.815	1|1:1.691:0.029,0.251,0.72	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.48:0.578,0.363,0.059	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.507:0.557,0.378,0.064	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.773:0.012,0.203,0.785	1|1:1.862:0.005,0.127,0.867	0|0:0.504:0.56,0.377,0.063	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.504:0.56,0.377,0.063	0|0:0.506:0.558,0.378,0.064	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.071:0.931,0.068,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.874:0.005,0.116,0.879	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.058:0.943,0.056,0.001	1|1:2:0,0,1	1|0:0.51:0.555,0.38,0.065	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.504:0.56,0.377,0.063	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16465920	SNP-3.16464564.	C	A	.	PASS	AR2=0.929;DR2=0.948;AF=0.487	GT:DS:GP	1|0:1.1:0.178,0.545,0.278	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.023:0.234,0.509,0.257	0|1:0.933:0.281,0.505,0.214	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.555:0.504,0.437,0.059	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.673:0.032,0.263,0.705	1|1:1.537:0.063,0.336,0.601	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.631:0.481,0.407,0.112	1|1:1.657:0.029,0.284,0.686	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.698:0.023,0.257,0.721	0|0:0.614:0.48,0.425,0.095	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.621:0.476,0.427,0.097	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.865:0.325,0.484,0.19	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.482:0.579,0.36,0.061	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.095:0.909,0.087,0.004	0|0:0:1,0,0	0|1:1.049:0.044,0.864,0.093	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.806:0.345,0.504,0.151	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.604:0.097,0.201,0.702	0|0:0.404:0.643,0.31,0.047	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.066:0.185,0.564,0.251	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.753:0.392,0.462,0.146	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.332:0.697,0.273,0.029	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.684:0.434,0.448,0.118	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.662:0.027,0.285,0.688	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.719:0.02,0.242,0.739	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.855:0.262,0.621,0.117	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.111:0.89,0.11,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.61:0.488,0.413,0.099	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.54:0.532,0.396,0.072	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.812:0.01,0.168,0.822	1|0:0.856:0.333,0.478,0.189	1|1:2:0,0,1	1|1:1.429:0.109,0.353,0.538	1|1:2:0,0,1	0|1:1.247:0.121,0.511,0.368	0|0:0.168:0.84,0.153,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.102:0.903,0.093,0.005	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.251:0.18,0.388,0.431	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:1.868:0.01,0.111,0.878	1|1:1.854:0.012,0.122,0.866	1|1:2:0,0,1	1|1:2:0,0,1
+3	16469586	SNP-3.16468230ac.	A	G	.	PASS	AR2=0.876;DR2=0.898;AF=0.321	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.456:0.071,0.402,0.527	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.624:0.032,0.313,0.655	1|1:2:0,0,1	1|1:1.722:0.023,0.232,0.745	1|1:1.659:0.038,0.265,0.697	1|1:1.626:0.032,0.311,0.658	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.777:0.013,0.198,0.789	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.286:0.132,0.451,0.418	1|1:2:0,0,1	1|1:1.776:0.013,0.199,0.788	1|1:2:0,0,1	1|1:1.799:0.01,0.181,0.809	1|1:1.776:0.013,0.199,0.789	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.698:0.024,0.254,0.722	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.306:0.122,0.449,0.428	0|1:1.157:0.195,0.452,0.353	1|0:1.029:0.244,0.483,0.273	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.491:0.063,0.384,0.553	0|1:1.051:0.229,0.492,0.28	1|0:1.27:0.131,0.468,0.401	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.773:0.005,0.217,0.778	1|1:1.431:0.072,0.425,0.503	1|1:1.647:0.035,0.284,0.681	1|0:1.059:0.233,0.474,0.292	0|0:0:1,0,0	0|1:1.15:0.266,0.317,0.417	1|1:1.716:0.02,0.243,0.737	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:1.564:0.051,0.333,0.615	1|0:1.164:0.175,0.486,0.339	1|1:1.056:0.235,0.473,0.291	0|0:0:1,0,0	1|1:1.333:0.114,0.44,0.447	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.124:0.185,0.506,0.309	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.172:0.191,0.445,0.363	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.997:0.259,0.485,0.256	0|0:0:1,0,0	0|1:1.117:0.18,0.524,0.297	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.577:0.425,0.572,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.188:0.162,0.488,0.35	0|0:0:1,0,0	0|1:0.96:0.279,0.482,0.239	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.775:0.013,0.199,0.788	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.322:0.118,0.442,0.44	1|1:1.774:0.013,0.2,0.787	1|1:1.756:0.015,0.215,0.771	1|1:1.773:0.013,0.201,0.786	0|1:0.962:0.273,0.492,0.235	0|0:1.043:0.24,0.478,0.283	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.774:0.013,0.2,0.787	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.112:0.112,0.664,0.224	1|1:1.467:0.06,0.412,0.527	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.953:0.275,0.498,0.228	1|0:1.317:0.126,0.432,0.443	1|1:1.774:0.013,0.2,0.787	1|1:1.266:0.14,0.454,0.406	1|1:1.574:0.039,0.348,0.613	1|1:1.777:0.013,0.198,0.79	1|1:1.899:0.003,0.095,0.902	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.268:0.134,0.464,0.402	1|1:1.894:0.003,0.1,0.897	0|1:0.964:0.243,0.55,0.207	1|1:1.781:0.013,0.194,0.794	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.575:0.046,0.333,0.621	1|1:2:0,0,1	1|1:1.455:0.078,0.389,0.533	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.963,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16470346	SNP-3.16468990.	A	G	.	PASS	AR2=0.986;DR2=0.988;AF=0.274	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.072:0.928,0.072,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|1:1.784:0.012,0.192,0.796	0|0:0:1,0,0	1|1:1.798:0.011,0.181,0.809	1|1:1.781:0.012,0.195,0.793	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.723:0.021,0.236,0.743	0|0:0:1,0,0	1|1:1.796:0.011,0.182,0.807	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.789:0.011,0.189,0.8	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.771:0.013,0.204,0.784	1|0:0.993:0.009,0.988,0.003	1|1:1.792:0.011,0.186,0.803	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.798:0.011,0.181,0.809	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.056:0.945,0.054,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.731:0.02,0.228,0.751	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.798:0.011,0.181,0.809	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16473434	SNP-3.16472078.	A	G	.	PASS	AR2=0.996;DR2=0.996;AF=0.434	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.855:0.002,0.14,0.857	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.97:0.001,0.029,0.97	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.969:0,0.03,0.969	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.771:0.023,0.183,0.794	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.932:0.002,0.065,0.933	1|1:2:0,0,1	1|1:1.941:0.001,0.058,0.942	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.952:0.001,0.045,0.953	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.956:0.001,0.043,0.956	1|1:1.96:0.001,0.039,0.961	0|0:0:1,0,0	1|1:1.95:0.001,0.049,0.951	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.958:0,0.042,0.958	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.97:0.001,0.029,0.971	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0.001,0.027,0.973	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.956:0.001,0.042,0.957	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16476167	SNP-3.16474811.	C	A	.	PASS	AR2=0.983;DR2=0.986;AF=0.238	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.741:0.017,0.225,0.758	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.74:0.017,0.225,0.757	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.798:0.011,0.18,0.809	1|1:2:0,0,1	1|1:1.79:0.013,0.185,0.802	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.748:0.016,0.22,0.764	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.86:0.005,0.13,0.865	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.804:0.012,0.171,0.817	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.671:0.026,0.276,0.698	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.802:0.01,0.179,0.812	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.758:0.015,0.211,0.774	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.731:0.019,0.231,0.75	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.8:0.01,0.179,0.81	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16476452	SNP-3.16475096.	C	A	.	PASS	AR2=0.992;DR2=0.993;AF=0.302	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.133:0.871,0.124,0.004	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.163:0.844,0.149,0.007	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.118:0.886,0.11,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.137:0.868,0.127,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.022:0.978,0.022,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.977,0.023,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.119:0.884,0.112,0.004	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.178:0.83,0.162,0.008	0|0:0.194:0.816,0.174,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0.118:0.886,0.111,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.163:0.844,0.149,0.007	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	16477921	SNP-3.16476565.	C	A	.	PASS	AR2=0.952;DR2=0.971;AF=0.511	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.455:0.075,0.396,0.53	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.453:0.075,0.396,0.529	1|1:1.505:0.06,0.375,0.565	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.453:0.075,0.397,0.528	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.449:0.077,0.398,0.525	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.444:0.078,0.4,0.522	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.455:0.075,0.395,0.53	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.454:0.075,0.396,0.529	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.433:0.081,0.404,0.515	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.492:0.061,0.386,0.553	1|1:1.433:0.081,0.404,0.515	0|0:0:1,0,0	1|1:1.454:0.075,0.396,0.529	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.427:0.082,0.409,0.509	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.439:0.079,0.402,0.519	0|1:1.454:0.075,0.396,0.529	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.455:0.075,0.395,0.53	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.438:0.08,0.402,0.518	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16478110	SNP-3.16476754.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.46	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.109:0.894,0.103,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.105:0.898,0.099,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.106:0.897,0.1,0.003	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.106:0.897,0.1,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.107:0.896,0.101,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16478160	SNP-3.16476804.	A	G	.	PASS	AR2=0.976;DR2=0.98;AF=0.219	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.094:0.91,0.086,0.004	0|0:0.261:0.752,0.236,0.013	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.905,0.093,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.1:0.903,0.095,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.222:0.789,0.2,0.011	0|0:0.183:0.827,0.164,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.125:0.88,0.116,0.005	0|0:0.212:0.8,0.189,0.012	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.187:0.822,0.169,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.314:0.706,0.273,0.02	0|0:0.2:0.814,0.172,0.014	0|1:1:0,1,0	0|0:0.169:0.839,0.154,0.007	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.156:0.851,0.142,0.007	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.999:0.001,0.999,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.1:0.903,0.094,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.138:0.869,0.124,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.278:0.741,0.24,0.019	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.136:0.868,0.128,0.004	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.175:0.833,0.159,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.224:0.788,0.201,0.012	0|0:0:1,0,0
+3	16478593	SNP-3.16477237.	C	A	.	PASS	AR2=0.992;DR2=0.993;AF=0.248	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.884:0.004,0.107,0.888	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.819:0.007,0.168,0.825	1|1:1.887:0.004,0.104,0.891	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.823:0.006,0.165,0.829	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.817:0.01,0.163,0.827	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.819:0.01,0.162,0.828	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.916:0.001,0.081,0.917	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.941:0.001,0.058,0.942	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.828:0.01,0.152,0.838	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.922:0.005,0.068,0.927	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16481773	SNP-3.16480417.	A	G	.	PASS	AR2=0.927;DR2=0.943;AF=0.252	GT:DS:GP	0|0:0.131:0.875,0.119,0.006	0|0:0.406:0.602,0.389,0.009	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.088:0.914,0.083,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.057:0.944,0.055,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.562:0.537,0.364,0.099	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.121:0.88,0.12,0.001	0|0:0:1,0,0	1|1:1.44:0.07,0.419,0.511	0|0:0.086:0.917,0.081,0.002	1|1:1.568:0.051,0.329,0.62	0|0:0:1,0,0	0|1:0.888:0.252,0.609,0.139	0|0:0:1,0,0	0|0:0.133:0.872,0.123,0.005	1|1:2:0,0,1	1|0:1.492:0.066,0.377,0.558	1|1:1.613:0.034,0.319,0.647	1|1:1.63:0.034,0.302,0.664	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.751:0.016,0.216,0.767	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.117:0.892,0.1,0.008	1|1:2:0,0,1	0|0:0.162:0.844,0.15,0.006	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.354:0.094,0.458,0.448	1|1:2:0,0,1	0|0:0.112:0.891,0.106,0.003	0|0:0:1,0,0	1|1:1.549:0.053,0.346,0.602	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.636:0.036,0.292,0.672	0|0:0.101:0.902,0.095,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.17:0.839,0.152,0.009	1|1:1.954:0.001,0.045,0.954	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.128:0.875,0.122,0.003	0|0:0.089:0.914,0.084,0.002	0|0:0:1,0,0	0|0:0.085:0.919,0.078,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.41:0.614,0.362,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.221:0.803,0.173,0.024	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.049:0.952,0.047,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.213:0.801,0.186,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.084:0.919,0.078,0.003	0|0:0:1,0,0	0|1:0.888:0.324,0.465,0.211	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.418:0.115,0.353,0.533	1|0:1.152:0.161,0.526,0.313	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.088:0.914,0.083,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.176:0.83,0.164,0.006	0|0:0.153:0.854,0.138,0.008	0|1:1.03:0.222,0.526,0.252	1|1:1.609:0.04,0.312,0.648	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.923:0.001,0.074,0.925	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.715:0.01,0.265,0.725	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.64:0.034,0.293,0.674	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.121:0.882,0.114,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.088:0.914,0.083,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.039:0.232,0.496,0.272	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16483495	SNP-3.16482139.	C	A	.	PASS	AR2=0.933;DR2=0.934;AF=0.46	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.919:0.293,0.496,0.211	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.919:0.293,0.496,0.211	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.919:0.293,0.496,0.211	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:0.919:0.293,0.496,0.211	1|1:2:0,0,1	0|1:0.919:0.293,0.496,0.211	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.919:0.293,0.496,0.211	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.919:0.293,0.496,0.211	1|1:2:0,0,1	0|0:0.919:0.293,0.496,0.211	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.919:0.293,0.496,0.211	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.919:0.293,0.496,0.211	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.985:0,0.015,0.985	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.984:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.919:0.293,0.496,0.211	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:0.919:0.293,0.496,0.211	1|1:2:0,0,1	0|1:0.919:0.293,0.496,0.211	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.919:0.293,0.496,0.211	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.919:0.293,0.496,0.212	1|0:0.919:0.293,0.496,0.211	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.919:0.293,0.496,0.211	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:0.919:0.293,0.496,0.211	0|0:0:1,0,0	1|0:0.919:0.293,0.496,0.211	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.919:0.293,0.496,0.211	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.919:0.293,0.496,0.211	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.919:0.293,0.496,0.211	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.919:0.293,0.496,0.211	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.919:0.293,0.496,0.211	1|0:0.919:0.293,0.496,0.211	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.919:0.293,0.496,0.211	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.919:0.293,0.496,0.211	1|1:2:0,0,1	0|1:0.919:0.293,0.496,0.211	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.919:0.293,0.496,0.211	1|0:0.919:0.293,0.496,0.211	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.919:0.293,0.496,0.211	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16494653	SNP-3.16493297.	A	G	.	PASS	AR2=0.979;DR2=0.983;AF=0.434	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.977:0,0.023,0.977	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.947:0.002,0.048,0.949	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.905:0.002,0.092,0.907	1|0:1:0,1,0	1|1:1.968:0.001,0.031,0.969	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.255:0.762,0.222,0.016	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.255:0.762,0.222,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.257:0.76,0.224,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.255:0.762,0.222,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.255:0.762,0.222,0.016	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.898:0.314,0.474,0.212	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.255:0.762,0.222,0.016	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.587:0.025,0.363,0.612	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.98:0,0.02,0.98	0|0:0.255:0.762,0.222,0.016	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.963:0.001,0.036,0.964	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.847:0.005,0.144,0.852	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.831:0.007,0.154,0.838	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.975:0,0.025,0.975	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.986:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.255:0.762,0.222,0.016	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.981:0,0.019,0.981	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.844:0.009,0.138,0.853	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.255:0.762,0.222,0.016	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.255:0.762,0.222,0.016	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.804:0.011,0.173,0.815	0|0:0:1,0,0	1|1:2:0,0,1
+3	16496539	SNP-3.16495183.	A	G	.	PASS	AR2=0.95;DR2=0.957;AF=0.361	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1.489:0.056,0.398,0.546	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:1.047:0.224,0.505,0.271	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.355:0.067,0.51,0.423	1|0:1:0,1,0	0|1:1.162:0.177,0.484,0.339	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1.046:0.228,0.499,0.273	1|1:1.739:0.017,0.227,0.756	1|1:1.771:0.018,0.193,0.789	1|1:2:0,0,1	0|1:1.028:0.236,0.5,0.264	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.824:0.008,0.159,0.833	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.787:0.012,0.189,0.799	1|1:1.709:0.018,0.255,0.727	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.951:0.002,0.045,0.953	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.903:0.003,0.091,0.906	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.934:0.066,0.933,0	0|0:0:1,0,0	1|1:1.803:0.01,0.177,0.813	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.814:0.009,0.168,0.823	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.022:0.24,0.498,0.262	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.978:0.269,0.484,0.247	1|1:1.716:0.02,0.243,0.736	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.607:0.039,0.315,0.646	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.75:0.016,0.219,0.765	0|1:1.044:0.225,0.506,0.269	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.327:0.106,0.461,0.433	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.808:0.01,0.172,0.818	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.313:0.102,0.482,0.416	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1.1:0.206,0.488,0.306	0|1:1:0,1,0	1|1:1.861:0.007,0.125,0.868	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.857:0.006,0.132,0.862	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.72:0.022,0.236,0.742	0|0:0:1,0,0	1|1:2:0,0,1
+3	16500736	SNP-3.16499380.	C	A	.	PASS	AR2=0.983;DR2=0.986;AF=0.243	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.931:0.002,0.066,0.933	1|1:1.841:0.007,0.146,0.847	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.609:0.022,0.347,0.631	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.855:0.005,0.135,0.86	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.613:0.034,0.32,0.646	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.812:0.008,0.171,0.821	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.837:0.006,0.15,0.843	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.902:0.004,0.091,0.906	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.739:0.016,0.228,0.756	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.797:0.01,0.183,0.807	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.896:0.002,0.1,0.898	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.718:0.02,0.242,0.738	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.731:0.018,0.233,0.749	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.874:0.005,0.117,0.878	1|1:1.974:0,0.025,0.975	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.845:0.008,0.139,0.853	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16501781	SNP-3.16500425.	A	G	.	PASS	AR2=0.924;DR2=0.942;AF=0.229	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.685:0.025,0.265,0.71	0|0:0.215:0.792,0.202,0.006	0|0:0:1,0,0	1|1:0.859:0.449,0.244,0.308	0|0:0:1,0,0	0|0:0.419:0.607,0.367,0.026	0|0:0:1,0,0	1|0:0.799:0.361,0.48,0.159	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.09:0.912,0.087,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.936,0.063,0.001	0|0:0:1,0,0	0|0:0.21:0.795,0.199,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.684:0.025,0.265,0.71	0|0:0:1,0,0	0|0:0.06:0.942,0.057,0.001	1|1:2:0,0,1	0|0:0.065:0.936,0.064,0	0|0:0.142:0.867,0.125,0.009	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.684:0.025,0.265,0.71	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.364:0.666,0.304,0.03	1|1:2:0,0,1	0|0:0.039:0.962,0.038,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.289:0.735,0.241,0.024	1|1:2:0,0,1	0|0:0.272:0.751,0.227,0.022	0|0:0.302:0.724,0.251,0.025	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.023:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.108:0.895,0.102,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.684:0.025,0.265,0.71	1|0:0.473:0.537,0.453,0.01	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.232:0.786,0.196,0.018	1|1:2:0,0,1	0|0:0.067:0.934,0.064,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.122:0.886,0.105,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.263:0.755,0.227,0.018	0|0:0:1,0,0	1|1:1.684:0.025,0.265,0.71	0|0:0.028:0.973,0.027,0	1|1:1.684:0.025,0.265,0.71	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.4:0.617,0.367,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.685:0.025,0.265,0.71	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.164:0.852,0.132,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.101:0.903,0.092,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.619:0.45,0.481,0.069	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.077:0.924,0.075,0.001	0|0:0.302:0.699,0.3,0.001	0|0:0.085:0.918,0.08,0.003	1|1:1.684:0.025,0.265,0.71	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.075:0.927,0.072,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.108:0.895,0.102,0.003	0|0:0.038:0.963,0.037,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.087:0.917,0.078,0.004	0|0:0:1,0,0	0|0:0.045:0.955,0.044,0	0|0:0:1,0,0	0|0:0.041:0.959,0.04,0.001	0|0:0.162:0.844,0.15,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.96,0.038,0.001	0|0:0:1,0,0	1|1:1.684:0.025,0.265,0.71	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.086:0.916,0.081,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.684:0.025,0.265,0.71	1|1:1.684:0.025,0.265,0.71	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.684:0.025,0.265,0.71	1|1:2:0,0,1	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.684:0.025,0.265,0.71	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16506045	SNP-3.16504689.	A	G	.	PASS	AR2=0.913;DR2=0.917;AF=0.424	GT:DS:GP	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.847:0.332,0.488,0.18	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.847:0.332,0.488,0.18	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.108:0.894,0.105,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.847:0.332,0.488,0.18	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.111:0.889,0.111,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.178:0.837,0.148,0.015	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:0.847:0.332,0.488,0.18	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.847:0.332,0.488,0.18	0|0:0:1,0,0	1|0:0.847:0.332,0.488,0.18	0|1:0.847:0.332,0.488,0.18	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.847:0.332,0.488,0.18	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:0.847:0.332,0.488,0.18	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.847:0.332,0.488,0.18	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.847:0.332,0.488,0.18	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.847:0.332,0.488,0.18	1|1:2:0,0,1	0|0:0.847:0.332,0.488,0.18	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.847:0.332,0.488,0.18	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.847:0.332,0.488,0.18	0|0:0:1,0,0	1|0:0.847:0.332,0.488,0.18	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.847:0.332,0.488,0.18	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.847:0.332,0.488,0.18	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.855:0.328,0.489,0.183	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.847:0.332,0.488,0.18	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.847:0.332,0.488,0.18	0|1:0.847:0.332,0.488,0.18	0|0:0:1,0,0	1|0:0.847:0.332,0.488,0.18	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.252:0.748,0.251,0	0|0:0:1,0,0	0|1:0.847:0.332,0.488,0.18	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.847:0.332,0.488,0.18	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.847:0.332,0.488,0.18	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.847:0.332,0.488,0.18	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.939,0.059,0.002	0|0:0.058:0.945,0.052,0.003	0|0:0:1,0,0	0|1:0.847:0.332,0.488,0.18	0|0:0.847:0.332,0.488,0.18	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.847:0.332,0.488,0.18	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:0.847:0.332,0.488,0.18	0|0:0:1,0,0	0|1:0.847:0.332,0.488,0.18	1|0:0.847:0.332,0.488,0.18	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.847:0.332,0.488,0.18	0|0:0.847:0.332,0.488,0.18	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.847:0.332,0.488,0.18	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.847:0.332,0.488,0.18	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16506581	SNP-3.16505225.	C	A	.	PASS	AR2=0.964;DR2=0.97;AF=0.453	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.885:0,0.115,0.885	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.15:0.856,0.138,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.15:0.856,0.138,0.006	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.15:0.856,0.138,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.047:0.005,0.943,0.052	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.365:0.062,0.511,0.427	1|1:1.919:0,0.081,0.919	0|0:0.15:0.856,0.138,0.006	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1.288:0.053,0.606,0.341	0|1:1:0,1,0	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.823:0.003,0.172,0.825	1|1:1.798:0.022,0.159,0.82	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.15:0.856,0.138,0.006	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.15:0.856,0.138,0.006	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.15:0.856,0.138,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.15:0.856,0.138,0.006	1|0:1:0,1,0	0|0:0.15:0.856,0.138,0.006	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.15:0.856,0.138,0.006	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.15:0.856,0.138,0.006	0|0:0:1,0,0	0|0:0.15:0.856,0.138,0.006	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.15:0.856,0.138,0.006	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.15:0.856,0.138,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.15:0.856,0.138,0.006	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.552:0.045,0.357,0.598	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.15:0.856,0.138,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.15:0.856,0.138,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.785:0.026,0.163,0.811	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.15:0.856,0.138,0.006	0|0:0.15:0.856,0.138,0.006	0|0:0:1,0,0	0|0:0.15:0.856,0.138,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.15:0.856,0.138,0.006	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.15:0.856,0.138,0.006	0|0:0:1,0,0	1|1:1.839:0.007,0.147,0.846	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.371:0.042,0.546,0.412	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.15:0.856,0.138,0.006	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.15:0.856,0.138,0.006	1|1:1.559:0.073,0.295,0.632	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.15:0.856,0.138,0.006	0|0:0.15:0.856,0.138,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.15:0.856,0.138,0.006	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:1.925:0.002,0.072,0.927	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.15:0.856,0.138,0.006	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.15:0.856,0.138,0.006	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.15:0.856,0.138,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.15:0.856,0.138,0.006	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16506692	SNP-3.16505336.	A	G	.	PASS	AR2=0.988;DR2=0.991;AF=0.325	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0.006:0.994,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.976:0,0.023,0.977	0|0:0:1,0,0	1|1:1.948:0.001,0.051,0.948	1|1:1.954:0.001,0.045,0.954	1|0:1:0,1,0	0|0:0.001:0.999,0.001,0	0|0:0.005:0.995,0.005,0	1|1:1.94:0.001,0.058,0.941	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.871:0.001,0.127,0.872	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.805:0.01,0.175,0.815	0|0:0:1,0,0	1|1:1.954:0.001,0.045,0.955	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.883:0.002,0.112,0.885	1|1:2:0,0,1	1|1:1.448:0.069,0.414,0.517	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.005:0.996,0.004,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.934:0,0.065,0.935	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.954,0.046,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.96:0,0.039,0.96	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.621:0.093,0.193,0.714	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.909:0.003,0.084,0.912	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.936,0.058,0.006	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.919:0.004,0.073,0.923	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.943:0.002,0.052,0.945	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16509058	SNP-3.16507702.	A	G	.	PASS	AR2=0.93;DR2=0.93;AF=0.443	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.025:0.238,0.499,0.263	0|0:0.023:0.977,0.023,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.037:0.963,0.036,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.026:0.238,0.499,0.263	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.025:0.238,0.499,0.263	0|0:0:1,0,0	0|1:1.025:0.238,0.499,0.263	1|1:1.025:0.238,0.499,0.263	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.025:0.238,0.499,0.263	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1.025:0.238,0.499,0.263	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.025:0.238,0.499,0.263	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.025:0.238,0.499,0.263	1|1:2:0,0,1	0|1:1.025:0.238,0.499,0.263	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.025:0.238,0.499,0.263	0|0:0:1,0,0	0|1:1.025:0.238,0.499,0.263	0|0:0:1,0,0	1|0:1.025:0.238,0.499,0.263	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.025:0.238,0.499,0.263	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.017:0.241,0.5,0.259	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.026:0.237,0.499,0.263	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.025:0.238,0.499,0.263	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.025:0.238,0.499,0.263	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.025:0.238,0.499,0.263	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.025:0.238,0.499,0.263	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.025:0.238,0.499,0.263	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.025:0.238,0.499,0.263	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.025:0.238,0.499,0.263	1|0:1.025:0.238,0.499,0.263	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.025:0.238,0.499,0.263	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.025:0.238,0.499,0.263	0|0:0:1,0,0	0|1:1.025:0.238,0.499,0.263	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.025:0.238,0.499,0.263	1|0:1.025:0.238,0.499,0.263	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:1.025:0.238,0.499,0.263	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.025:0.238,0.499,0.263	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16509658	SNP-3.16508302.	A	G	.	PASS	AR2=0.949;DR2=0.962;AF=0.361	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.37:0.664,0.301,0.034	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.869:0.004,0.123,0.873	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.983:0,0.017,0.983	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.37:0.664,0.301,0.034	0|0:0:1,0,0	0|0:0.37:0.664,0.301,0.034	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.9:0.1,0.899,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.37:0.664,0.301,0.034	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.37:0.664,0.301,0.034	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.37:0.664,0.301,0.034	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.37:0.664,0.301,0.034	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.793:0.01,0.188,0.803	1|1:1.778:0.007,0.209,0.784	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.37:0.664,0.301,0.034	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.37:0.664,0.301,0.034	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.368:0.666,0.3,0.034	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.892:0.004,0.101,0.896	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.372:0.663,0.302,0.035	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.37:0.664,0.301,0.034	0|0:0:1,0,0	0|0:0.37:0.664,0.301,0.034	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.37:0.664,0.301,0.034	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.37:0.664,0.301,0.034	1|1:1.854:0.004,0.139,0.857	1|1:1.915:0.002,0.081,0.917	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.37:0.664,0.301,0.034	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.917:0,0.083,0.917	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.37:0.664,0.301,0.034	0|0:0.37:0.664,0.301,0.034	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.371:0.664,0.302,0.035	0|0:0:1,0,0	0|0:0.37:0.664,0.301,0.034	0|0:0.37:0.664,0.301,0.034	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.37:0.664,0.301,0.034	0|1:0.37:0.664,0.301,0.034	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.37:0.664,0.301,0.034	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16510248	SNP-3.16508892.	A	G	.	PASS	AR2=0.99;DR2=0.991;AF=0.209	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.09:0.912,0.086,0.002	0|0:0.115:0.889,0.107,0.004	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.175:0.834,0.157,0.009	0|0:0:1,0,0	0|0:0.106:0.897,0.1,0.003	0|0:0:1,0,0	0|0:0.114:0.889,0.107,0.003	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.136:0.87,0.124,0.006	0|0:0.041:0.96,0.04,0.001	0|1:1.107:0,0.893,0.107	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.067:0.934,0.065,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.096:0.905,0.093,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.064:0.936,0.063,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.936,0.062,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.999:0.001,0.999,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.941:0.002,0.054,0.944	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.068:0.933,0.065,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.932,0.066,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.05,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.931,0.068,0.001	0|0:0:1,0,0
+3	16510365	SNP-3.16509009.	A	G	.	PASS	AR2=0.867;DR2=0.896;AF=0.304	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.912:0.287,0.513,0.2	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.819:0.324,0.534,0.142	0|1:0.751:0.388,0.473,0.139	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.77:0.383,0.463,0.154	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.487:0.555,0.404,0.042	0|0:0:1,0,0	0|1:0.865:0.316,0.503,0.181	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.405:0.635,0.326,0.039	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:0.899:0.304,0.493,0.203	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.042:0.222,0.515,0.264	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.583:0.494,0.428,0.078	1|0:0.774:0.38,0.467,0.153	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.528:0.548,0.376,0.076	0|0:0:1,0,0	1|1:1.393:0.114,0.378,0.508	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.57:0.512,0.406,0.082	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.109:0.134,0.622,0.244	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.455:0.557,0.43,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.616:0.486,0.413,0.101	0|0:0.187:0.823,0.167,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.022:0.154,0.671,0.175	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.121:0.248,0.383,0.369	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.638:0.061,0.241,0.698	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.582:0.069,0.281,0.65	0|0:0:1,0,0	0|0:0.133:0.871,0.125,0.004	0|0:0:1,0,0	0|0:0.163:0.843,0.151,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.629:0.466,0.439,0.095	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.961:0.119,0.8,0.081	1|0:1.263:0.145,0.447,0.408	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.638:0.061,0.241,0.698	0|0:0:1,0,0	0|0:0.978:0.267,0.489,0.244	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.41:0.653,0.284,0.063	0|0:0:1,0,0	0|0:0.732:0.396,0.477,0.127	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.792:0.376,0.455,0.168	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.596:0.485,0.433,0.082	0|0:0.432:0.613,0.342,0.045	1|1:1.08:0.206,0.508,0.286	0|0:0:1,0,0	1|0:0.985:0.271,0.473,0.256	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.605:0.49,0.414,0.095	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.984:0.251,0.513,0.236	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.09:0.215,0.481,0.304	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.707:0.049,0.196,0.755	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.232:0.77,0.228,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.055:0.946,0.052,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.683:0.437,0.443,0.12	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.707:0.429,0.435,0.136	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.513:0.56,0.367,0.073	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.7:0.426,0.447,0.127	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.755:0.385,0.476,0.14	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.68:0.439,0.442,0.119	0|0:0:1,0,0	0|0:0.067:0.935,0.064,0.002	0|1:1.135:0.231,0.402,0.367	0|0:0.654:0.444,0.458,0.098	0|0:0.627:0.467,0.439,0.094
+3	16510486	SNP-3.16509130.	C	A	.	PASS	AR2=0.995;DR2=0.996;AF=0.252	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.99:0,0.009,0.991	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.806:0,0.194,0.806	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.094:0,0.906,0.094	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.017:0.01,0.963,0.027	0|0:0.227:0.783,0.208,0.009	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	1|1:1.99:0,0.009,0.991	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.99:0,0.009,0.991	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.257:0,0.743,0.257	0|0:0:1,0,0
+3	16512835	SNP-3.16511479.	C	A	.	PASS	AR2=0.955;DR2=0.968;AF=0.284	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.076:0.925,0.073,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.06:0.941,0.058,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.936,0.064,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.402:0.64,0.319,0.041	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.439:0.609,0.342,0.048	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.042:0.958,0.042,0	0|0:0.059:0.942,0.058,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.941,0.059,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.431:0.616,0.337,0.047	1|0:0.492:0.569,0.369,0.061	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.431:0.616,0.338,0.047	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.298:0.702,0.298,0	0|0:0.495:0.565,0.374,0.06	0|0:0.121:0.881,0.118,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.023:0.977,0.023,0	1|1:1.837:0.006,0.15,0.844	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.435:0.612,0.34,0.048	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.816:0.008,0.168,0.824	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.431:0.616,0.337,0.047	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.31:0.72,0.25,0.03	0|0:0.581:0.507,0.404,0.089	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.089:0.914,0.084,0.002	0|0:0.093:0.91,0.087,0.003	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.966:0.001,0.033,0.967	0|0:0:1,0,0	0|0:0.058:0.943,0.056,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.93,0.068,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.181:0.837,0.145,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.088:0.914,0.084,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.442:0.61,0.339,0.051	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.431:0.616,0.337,0.047	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.431:0.616,0.337,0.047	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.176:0.069,0.686,0.245	0|0:0:1,0,0
+3	16515197	SNP-3.16513841.	C	A	.	PASS	AR2=0.99;DR2=0.991;AF=0.271	GT:DS:GP	1|1:1.978:0,0.021,0.978	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.027:0.973,0.026,0	0|0:0.266:0.751,0.232,0.017	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.193:0.817,0.174,0.009	1|1:1.987:0,0.013,0.987	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.214:0.796,0.194,0.01	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.204:0.805,0.185,0.009	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.026:0.974,0.026,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.98:0,0.019,0.98	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.962:0,0.037,0.962	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.826:0.007,0.161,0.832	1|1:2:0,0,1	1|1:1.928:0.001,0.07,0.929	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.268:0.75,0.232,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.23:0.784,0.202,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16516237	SNP-3.16514881.	C	A	.	PASS	AR2=0.968;DR2=0.974;AF=0.491	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.013,0.986	1|1:2:0,0,1	0|0:0.531:0.543,0.383,0.074	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.285:0.73,0.256,0.015	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.077:0.924,0.074,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.117:0.886,0.112,0.003	1|1:2:0,0,1	0|0:0.226:0.787,0.2,0.013	0|0:0.048:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.146:0,0.854,0.146	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.09:0.91,0.09,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.231:0.783,0.203,0.014	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.231:0.783,0.203,0.014	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.231:0.783,0.203,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.84:0.006,0.148,0.846	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.249:0.791,0.169,0.04	0|0:0.231:0.783,0.203,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.276:0.744,0.236,0.02	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.82:0.008,0.165,0.828	0|0:0.284:0.737,0.241,0.022	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.231:0.783,0.203,0.014	1|1:2:0,0,1	0|0:0.231:0.783,0.203,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.151:0.184,0.482,0.335	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:1.981:0,0.019,0.981	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.977:0,0.023,0.977	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.957,0.042,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.966:0.001,0.033,0.967	1|0:0.748:0.394,0.465,0.141	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.226:0.001,0.773,0.227	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.554:0.52,0.406,0.074	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:1.99:0,0.01,0.99	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.182:0.827,0.163,0.01	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.213:0.799,0.189,0.012	1|1:2:0,0,1	0|0:0.231:0.783,0.203,0.014	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.231:0.783,0.203,0.014	0|0:0.231:0.783,0.203,0.014	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.053:0.084,0.779,0.137	1|1:2:0,0,1
+3	16518919	SNP-3.16517563.	A	G	.	PASS	AR2=0.92;DR2=0.941;AF=0.275	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.977:0,0.022,0.978	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.297:0.717,0.268,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|1:0.92:0.327,0.426,0.247	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	0|0:0.189:0.82,0.17,0.01	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.942:0.001,0.057,0.943	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.183:0.817,0.183,0	1|1:1.225:0.223,0.33,0.448	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.93:0.004,0.062,0.934	0|0:0.86:0.314,0.511,0.175	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.976:0,0.024,0.976	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.82:0.342,0.495,0.163	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.322:0.715,0.249,0.037	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.525:0.537,0.401,0.062	0|0:0:1,0,0	0|0:0:1,0,0	1|1:0.992:0.31,0.389,0.301	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.399:0.649,0.303,0.048	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.444:0.608,0.341,0.051	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.372:0.67,0.289,0.042	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.253:0.763,0.22,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.03:0.251,0.468,0.281	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.977:0,0.023,0.977	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.325:0.714,0.248,0.039	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.197:0.814,0.176,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.29:0.73,0.25,0.02	0|0:0:1,0,0	0|0:0.557:0.49,0.463,0.047	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.388:0.647,0.318,0.035	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.972:0,0.028,0.972	0|0:0:1,0,0	0|0:0.565:0.544,0.346,0.109	0|0:0.629:0.558,0.256,0.186	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.496:0.565,0.374,0.061	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.287:0.737,0.238,0.025	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.353:0.171,0.306,0.524	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.975:0,0.024,0.976	1|1:2:0,0,1	0|1:0.906:0.323,0.448,0.229	0|0:0:1,0,0	0|0:0.159:0.848,0.145,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.496:0.555,0.393,0.051	0|0:0.326:0.713,0.248,0.039	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.876:0.33,0.464,0.206	0|0:0:1,0,0	1|1:1.977:0,0.023,0.977	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16521187	SNP-3.16519831.	C	A	.	PASS	AR2=0.991;DR2=0.993;AF=0.234	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.737:0,0.262,0.738	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.011:0.989,0.011,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.343:0.657,0.343,0	0|0:0.016:0.984,0.016,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.67:0.027,0.277,0.697	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.958:0.001,0.04,0.959	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.899:0.006,0.089,0.905	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.721:0.015,0.249,0.736	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	16523463	SNP-3.16522107.	A	G	.	PASS	AR2=0.975;DR2=0.98;AF=0.346	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.189:0.819,0.172,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.821:0.008,0.162,0.829	1|1:1.756:0.015,0.214,0.771	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.822:0.01,0.159,0.832	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.811:0.01,0.169,0.821	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.278:0.723,0.277,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.598:0.402,0.598,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.659:0.038,0.266,0.696	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.038:0.962,0.037,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.073:0.929,0.069,0.002	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.658:0.413,0.515,0.072	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.251:0.766,0.216,0.017	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.739:0.013,0.234,0.753	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.89:0.004,0.102,0.894	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.299:0.709,0.283,0.008	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.217:0.798,0.187,0.015	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.962,0.037,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.739:0.013,0.234,0.753	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.849:0.007,0.138,0.855	1|0:1.162:0.198,0.442,0.36	0|1:1:0,1,0	0|0:0:1,0,0
+3	16524472	SNP-3.16523116.	A	G	.	PASS	AR2=0.98;DR2=0.987;AF=0.375	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.534:0.586,0.294,0.12	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.912:0.001,0.085,0.913	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.632:0.473,0.422,0.105	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.009:0.991,0.008,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1.131:0.183,0.503,0.314	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.229:0.79,0.191,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.046:0.955,0.045,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.643:0.054,0.249,0.697	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.558:0.56,0.322,0.118	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.216:0.802,0.179,0.019	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.578:0.423,0.576,0.001	0|0:0:1,0,0
+3	16528169	SNP-3.16526813.	A	G	.	PASS	AR2=0.933;DR2=0.948;AF=0.412	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.769:0.374,0.483,0.143	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|1:0.841:0.335,0.49,0.175	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|1:0.758:0.355,0.533,0.112	0|0:0:1,0,0	0|0:0.828:0.349,0.473,0.177	0|0:0.047:0.954,0.046,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0.749:0.394,0.463,0.143	1|1:1.984:0,0.015,0.985	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.037:0.963,0.037,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.668:0.444,0.444,0.112	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.26:0.74,0.26,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.667:0.445,0.444,0.112	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.761:0.387,0.465,0.148	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.665:0.446,0.443,0.111	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.668:0.444,0.444,0.112	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.667:0.445,0.444,0.111	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.668:0.444,0.444,0.112	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.668:0.444,0.444,0.112	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.803:0.359,0.479,0.162	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.813:0.354,0.479,0.167	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:0.831:0.34,0.489,0.171	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.756:0.245,0.754,0.001	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:0.668:0.444,0.444,0.112	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.706:0.426,0.441,0.133	0|1:0.756:0.389,0.466,0.145	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.665:0.446,0.443,0.111	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.668:0.444,0.444,0.112	1|0:0.668:0.444,0.444,0.112	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.668:0.444,0.444,0.112	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.8:0.363,0.474,0.163	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0.208:0.792,0.208,0	0|0:0:1,0,0
+3	16528623	SNP-3.16527267.	A	G	.	PASS	AR2=1;DR2=1;AF=0.208	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1
+3	16529883	SNP-3.16528527.	A	G	.	PASS	AR2=0.996;DR2=0.996;AF=0.366	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1.01:0.251,0.488,0.261	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.01:0.251,0.488,0.261	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16530467	SNP-3.16529111.	A	G	.	PASS	AR2=0.963;DR2=0.974;AF=0.229	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:0.622:0.47,0.438,0.092	0|1:1:0,1,0	0|0:0:1,0,0	1|0:0.696:0.425,0.455,0.12	0|0:0.534:0.538,0.39,0.072	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.104:0.899,0.098,0.003	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.077:0.925,0.073,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.301:0.713,0.273,0.014	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.251:0.769,0.211,0.02	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.935,0.064,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:0.849:0.338,0.474,0.188	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0.541:0.533,0.394,0.074	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.081:0.921,0.077,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.104:0.899,0.099,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:0.708:0.409,0.474,0.117	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.611:0.477,0.435,0.088	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0
+3	16530583	SNP-3.16529227.	A	G	.	PASS	AR2=0.861;DR2=0.894;AF=0.25	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.686:0.432,0.45,0.118	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.686:0.432,0.45,0.118	0|1:0.686:0.432,0.45,0.118	0|1:0.685:0.433,0.449,0.118	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.671:0.441,0.446,0.113	0|1:0.665:0.445,0.445,0.11	0|0:0.687:0.432,0.45,0.118	0|0:0.683:0.434,0.449,0.117	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.686:0.432,0.45,0.118	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:0.686:0.432,0.45,0.118	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.686:0.432,0.45,0.118	1|0:1:0,1,0	1|1:2:0,0,1	1|0:0.686:0.432,0.45,0.118	1|1:2:0,0,1	0|1:0.686:0.432,0.45,0.118	0|0:0.686:0.432,0.45,0.118	0|0:0.69:0.43,0.451,0.119	0|0:0:1,0,0	1|0:1:0,1,0	1|0:0.621:0.477,0.425,0.098	0|1:0.662:0.45,0.439,0.111	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.686:0.432,0.45,0.118	0|0:0.381:0.657,0.306,0.038	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.343:0.657,0.343,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.381:0.657,0.306,0.038	0|0:0:1,0,0	0|0:0.381:0.657,0.306,0.038	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:0.664:0.447,0.442,0.111	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.686:0.432,0.45,0.118	0|0:0:1,0,0	1|0:0.686:0.432,0.45,0.118	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.683:0.434,0.449,0.117	0|0:0:1,0,0	1|0:0.682:0.435,0.449,0.117	1|0:0.686:0.432,0.45,0.118	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.381:0.657,0.306,0.038	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.686:0.432,0.45,0.118	0|0:0:1,0,0	1|0:0.682:0.435,0.449,0.116	0|0:0.686:0.432,0.45,0.118	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.686:0.432,0.45,0.118	0|0:0:1,0,0	0|0:0.685:0.433,0.45,0.118	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.651:0.455,0.439,0.106	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.686:0.432,0.45,0.118	0|0:0:1,0,0	0|1:0.686:0.432,0.45,0.118	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.686:0.432,0.45,0.118	1|0:0.686:0.432,0.45,0.118	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.68:0.436,0.448,0.116	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.961,0.039,0	0|0:0:1,0,0
+3	16530591	SNP-3.16529235.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.222	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.166:0.838,0.158,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16530801	SNP-3.16529445.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.36	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.121:0.882,0.115,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.074:0.927,0.071,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16537232	SNP-3.16535876.	C	A	.	PASS	AR2=0.977;DR2=0.982;AF=0.399	GT:DS:GP	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.156:0.85,0.144,0.006	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.706:0.34,0.614,0.046	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.159:0.847,0.147,0.006	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.228:0.786,0.2,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.132:0.873,0.123,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.953,0.047,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.05:0.951,0.048,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.187:0.834,0.146,0.021	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.158:0.847,0.149,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.298:0.737,0.228,0.035	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.618:0.406,0.571,0.024	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.146:0.86,0.134,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:0.982:0.255,0.509,0.237	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.132:0.878,0.113,0.009	1|1:2:0,0,1	0|0:0.773:0.472,0.284,0.245	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.264:0.745,0.245,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.65:0.373,0.604,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.094:0.911,0.085,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.157:0.85,0.144,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.952,0.047,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16548895	SNP-3.16547539.	A	G	.	PASS	AR2=0.989;DR2=0.99;AF=0.198	GT:DS:GP	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.159:0.849,0.143,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.121:0.882,0.115,0.003	1|1:2:0,0,1	0|0:0.046:0.955,0.045,0.001	0|0:0.055:0.945,0.054,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.064:0.936,0.064,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.965,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.285:0.73,0.255,0.015	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0.197:0.814,0.175,0.011	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.151:0.854,0.14,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.157:0.85,0.144,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.952,0.048,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.241:0.774,0.212,0.015	0|0:0:1,0,0
+3	16548979	SNP-3.16547623.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.228	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.09:0.913,0.083,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16549393	SNP-3.16548037.	A	G	.	PASS	AR2=0.982;DR2=0.982;AF=0.328	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1.085:0.212,0.491,0.297	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1.015:0.242,0.502,0.256	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.007:0.994,0.006,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.644:0.001,0.354,0.645	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.015:0.242,0.502,0.256	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1.015:0.241,0.502,0.256	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.015:0.242,0.502,0.256	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.038:0.234,0.494,0.272	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0
+3	16549481	SNP-3.16548125.	A	G	.	PASS	AR2=0.994;DR2=0.995;AF=0.192	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.334:0.696,0.273,0.031	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.114:0.89,0.106,0.004	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.063:0.937,0.063,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.118:0.891,0.1,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.07:0.933,0.065,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.028:0.972,0.027,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.112:0.891,0.106,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	16549648	SNP-3.16548292.	C	A	.	PASS	AR2=0.966;DR2=0.977;AF=0.251	GT:DS:GP	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.482:0.146,0.225,0.628	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.142:0.867,0.125,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.042:0.958,0.041,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.952,0.047,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.961,0.039,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.048:0.952,0.047,0.001	0|0:0.041:0.96,0.04,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.968,0.032,0	0|0:0.16:0.845,0.149,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.054:0.949,0.047,0.003	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.133:0.867,0.133,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.578:0.039,0.344,0.617	1|1:1.525:0.008,0.458,0.534	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.75:0.439,0.372,0.189	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.894:0.004,0.099,0.898	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.557:0.016,0.41,0.573	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.482:0.038,0.442,0.52	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.952:0.001,0.046,0.953	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.169:0.84,0.151,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0.006:0.994,0.006,0	0|0:0.052:0.948,0.051,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.006:0.994,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.178:0.832,0.158,0.01	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.142:0.867,0.125,0.008	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.527:0.101,0.27,0.629	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.08:0.92,0.08,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16549691	SNP-3.16548335.	A	G	.	PASS	AR2=1;DR2=1;AF=0.282	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.958:0.001,0.041,0.959	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16549728	SNP-3.16548372.	A	G	.	PASS	AR2=0.992;DR2=0.994;AF=0.279	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.956,0.044,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.316:0.688,0.308,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.034:0.966,0.034,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.881:0.003,0.112,0.884	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.885:0.003,0.109,0.888	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.872:0.004,0.119,0.876	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.872:0.004,0.12,0.876	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.925:0.001,0.073,0.926	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.563:0.438,0.56,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.885:0.003,0.108,0.888	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.005,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16550325	SNP-3.16548969.	A	G	.	PASS	AR2=0.976;DR2=0.981;AF=0.263	GT:DS:GP	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.747:0.017,0.22,0.764	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.693:0.021,0.264,0.714	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.739:0,0.261,0.739	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.745:0.017,0.222,0.761	1|1:1.747:0.017,0.22,0.764	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.693:0.021,0.264,0.714	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.744:0.017,0.222,0.761	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.812:0.008,0.172,0.82	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.76:0.267,0.706,0.027	0|0:0:1,0,0	1|1:1.747:0.017,0.22,0.764	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.951,0.049,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.744:0.017,0.222,0.761	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.747:0.017,0.22,0.764	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.059:0.943,0.055,0.002	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.694:0.022,0.261,0.716	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.744:0.017,0.223,0.761	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.744:0.017,0.222,0.761	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16550359	SNP-3.16549003.	A	G	.	PASS	AR2=0.992;DR2=0.993;AF=0.191	GT:DS:GP	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.102:0.901,0.097,0.002	0|0:0.143:0.86,0.137,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.079:0.922,0.078,0.001	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.93,0.07,0	1|1:2:0,0,1	0|0:0.072:0.929,0.07,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.968,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.122:0.881,0.117,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.145:0.861,0.134,0.005	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.104:0.899,0.099,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.104:0.899,0.097,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.105:0.898,0.099,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.968,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0.032:0.968,0.032,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16550385	SNP-3.16549029.	C	A	.	PASS	AR2=0.961;DR2=0.972;AF=0.229	GT:DS:GP	1|0:0.812:0.318,0.552,0.13	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.551:0.499,0.451,0.05	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.984:0.145,0.727,0.128	1|1:2:0,0,1	0|0:0.3:0.725,0.25,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.85:0.009,0.133,0.859	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.117:0.884,0.114,0.001	1|1:1.475:0.077,0.372,0.552	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.02:0.98,0.02,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.077:0.924,0.076,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.253:0.764,0.219,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.302:0.724,0.251,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.297:0.729,0.246,0.025	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.626:0.049,0.276,0.675	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.31:0.717,0.255,0.028	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.97:0.001,0.029,0.971	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.355:0.134,0.377,0.489	0|0:0.299:0.726,0.249,0.025	1|1:1.977:0.001,0.022,0.978	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16550983	SNP-3.16549627.	A	G	.	PASS	AR2=0.998;DR2=0.999;AF=0.294	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.077:0.924,0.075,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.039:0.962,0.037,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.176:0.83,0.164,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16551258	SNP-3.16549902.	A	G	.	PASS	AR2=0.977;DR2=0.983;AF=0.303	GT:DS:GP	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.055:0.947,0.052,0.001	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.22:0.791,0.198,0.011	0|0:0.242:0.772,0.214,0.014	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.313:0.712,0.263,0.025	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0.315:0.71,0.266,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.857:0.005,0.133,0.862	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.05:0.951,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.312:0.7,0.289,0.011	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.089:0.913,0.085,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.082:0.919,0.079,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.537:0.029,0.406,0.566	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.857:0.005,0.133,0.862	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.932:0.002,0.065,0.934	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.956,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.857:0.005,0.133,0.862	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.857:0.005,0.133,0.862	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.014,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.432:0.129,0.31,0.561	0|0:0.402:0.639,0.32,0.041	0|0:0:1,0,0
+3	16552163	SNP-3.16550807.	C	A	.	PASS	AR2=0.862;DR2=0.913;AF=0.33	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.979,0.021,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.2:0.8,0.2,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0.568:0.513,0.406,0.081	1|1:1.814:0.002,0.182,0.816	1|1:2:0,0,1	0|0:0.568:0.513,0.406,0.081	0|0:0.568:0.513,0.406,0.081	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.548:0.527,0.398,0.075	0|0:0.568:0.513,0.406,0.081	0|0:0.564:0.516,0.405,0.08	0|0:0.568:0.513,0.406,0.081	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.27:0.73,0.269,0.001	0|0:0.568:0.513,0.406,0.081	0|0:0.556:0.52,0.404,0.076	0|0:0.568:0.513,0.406,0.081	0|0:0.568:0.513,0.406,0.081	0|0:0.568:0.513,0.406,0.081	0|0:0.568:0.513,0.406,0.081	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.568:0.513,0.406,0.081	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.568:0.513,0.406,0.081	0|0:0.535:0.537,0.392,0.071	0|1:1:0,1,0	0|1:0.568:0.513,0.406,0.081	0|0:0:1,0,0	0|1:0.568:0.513,0.406,0.081	0|0:0.568:0.513,0.406,0.081	0|0:0.568:0.513,0.406,0.081	0|1:0.656:0.345,0.654,0.001	0|0:0.56:0.519,0.403,0.078	0|0:0.57:0.511,0.407,0.081	0|0:0.568:0.513,0.406,0.081	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.989:0,0.01,0.989	0|0:0:1,0,0	1|1:1.96:0,0.039,0.961	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.564:0.516,0.405,0.08	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.976:0,0.024,0.976	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.043:0.957,0.043,0	0|0:0.568:0.513,0.406,0.081	0|0:0.568:0.513,0.406,0.081	0|0:0.568:0.513,0.406,0.081	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.568:0.513,0.406,0.081	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.944,0.055,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.76:0.326,0.589,0.085	1|0:0.568:0.513,0.406,0.081	0|0:0:1,0,0	0|0:0.568:0.513,0.406,0.081	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.559:0.519,0.403,0.078	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0.568:0.513,0.406,0.081	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.568:0.513,0.406,0.081	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.568:0.513,0.406,0.081	1|0:0.568:0.513,0.406,0.081	0|0:0.568:0.513,0.406,0.081	0|0:0.512:0.553,0.383,0.065	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.568:0.513,0.406,0.081	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0.568:0.513,0.406,0.081	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.568:0.513,0.406,0.081	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0
+3	16552494	SNP-3.16551138.	C	A	.	PASS	AR2=0.998;DR2=0.999;AF=0.269	GT:DS:GP	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.236:0.765,0.233,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16556476	SNP-3.16555120.	C	A	.	PASS	AR2=1;DR2=1;AF=0.432	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.919:0.001,0.078,0.92	1|0:1:0,1,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16557632	SNP-3.16556276.	A	G	.	PASS	AR2=0.956;DR2=0.966;AF=0.258	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:0.813:0.187,0.813,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.237:0.763,0.237,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.615:0.48,0.425,0.095	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.922:0.292,0.494,0.214	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.923:0.292,0.494,0.214	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.922:0.292,0.494,0.214	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.863:0.326,0.486,0.188	0|1:0.882:0.314,0.49,0.196	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:0.894:0.306,0.494,0.2	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.641:0.462,0.435,0.103	1|0:0.641:0.462,0.435,0.103	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.641:0.462,0.435,0.103	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.922:0.292,0.494,0.214	1|0:0.889:0.316,0.48,0.205	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.949,0.05,0.002	0|0:0:1,0,0
+3	16559052	SNP-3.16557696.	A	G	.	PASS	AR2=0.998;DR2=0.999;AF=0.441	GT:DS:GP	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.706:0,0.294,0.706	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:1.876:0,0.124,0.876	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16559774	SNP-3.16558418.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.448	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.251:0.766,0.218,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16560375	SNP-3.16559019.	A	G	.	PASS	AR2=0.914;DR2=0.93;AF=0.387	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.844:0.006,0.144,0.85	1|1:1.813:0.009,0.17,0.821	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.843:0.006,0.144,0.85	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.844:0.006,0.144,0.85	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.844:0.006,0.144,0.85	1|1:1.844:0.006,0.144,0.85	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.461:0.077,0.385,0.538	1|1:1.844:0.006,0.144,0.85	1|1:1.844:0.006,0.144,0.85	1|1:1.844:0.006,0.144,0.85	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.828:0.007,0.159,0.834	1|1:1.8:0.011,0.179,0.811	1|1:1.8:0.011,0.179,0.811	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.797:0.011,0.181,0.808	1|1:1.803:0.01,0.176,0.814	1|1:1.802:0.01,0.177,0.813	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.572:0.042,0.343,0.615	1|1:2:0,0,1	1|1:1.67:0.022,0.286,0.692	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.802:0.01,0.177,0.812	1|1:1.8:0.011,0.179,0.811	1|1:1.429:0.085,0.401,0.514	0|0:0:1,0,0	1|0:1.419:0.087,0.407,0.506	1|1:1.8:0.011,0.179,0.811	1|1:1.482:0.067,0.384,0.549	0|1:1.419:0.087,0.407,0.506	1|1:2:0,0,1	1|1:1.8:0.011,0.179,0.811	1|1:1.809:0.01,0.171,0.819	1|1:1.8:0.011,0.179,0.811	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.8:0.011,0.179,0.811	1|1:2:0,0,1	1|1:1.8:0.011,0.179,0.811	1|1:1.433:0.083,0.401,0.516	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.8:0.011,0.179,0.811	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.801:0.01,0.178,0.812	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.419:0.087,0.407,0.506	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.8:0.011,0.179,0.811	0|0:0:1,0,0	1|1:1.8:0.011,0.179,0.811	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.858:0.005,0.132,0.863	1|0:1.844:0.006,0.144,0.85	1|1:1.844:0.006,0.144,0.85	1|1:1.507:0.058,0.376,0.566	1|1:1.8:0.011,0.179,0.811	0|0:0:1,0,0	1|1:1.8:0.011,0.179,0.811	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.844:0.006,0.144,0.85	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.844:0.006,0.144,0.85	0|0:0:1,0,0	1|1:1.844:0.006,0.144,0.85	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.802:0.01,0.177,0.813	1|1:1.8:0.011,0.179,0.811	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.456:0.079,0.386,0.535	1|1:1.8:0.011,0.179,0.811	1|1:1.844:0.006,0.144,0.85	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.802:0.01,0.177,0.813	1|1:1.847:0.006,0.141,0.853	1|1:1.802:0.01,0.177,0.813	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.8:0.011,0.179,0.811	1|1:1.8:0.011,0.179,0.811	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.8:0.011,0.179,0.811	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.866:0.005,0.124,0.871	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.844:0.006,0.144,0.85	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.429:0.085,0.401,0.514	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.429:0.085,0.401,0.514	1|1:1.844:0.006,0.144,0.85	0|0:0:1,0,0	1|0:1.364:0.107,0.422,0.471	1|1:1.838:0.009,0.145,0.846	0|0:0:1,0,0	1|1:1.8:0.011,0.179,0.811	0|0:0:1,0,0	1|1:1.422:0.086,0.406,0.508	0|0:0:1,0,0	1|1:1.8:0.011,0.179,0.811	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.8:0.011,0.179,0.811	1|0:1.436:0.082,0.399,0.518	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.848:0.006,0.141,0.853	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.43:0.084,0.401,0.515	1|1:1.649:0.045,0.26,0.694	0|0:0:1,0,0	1|1:2:0,0,1
+3	16560612	SNP-3.16559256.	A	G	.	PASS	AR2=1;DR2=1;AF=0.436	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16560855	SNP-3.16559499.	C	A	.	PASS	AR2=1;DR2=1;AF=0.268	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16562821	SNP-3.16561465.	A	G	.	PASS	AR2=0.995;DR2=0.995;AF=0.416	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.87:0.004,0.121,0.874	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.809:0.008,0.175,0.817	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.87:0.004,0.122,0.874	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.956:0,0.043,0.957	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.956:0,0.043,0.957	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.958:0,0.041,0.958	1|1:2:0,0,1	1|1:1.956:0,0.043,0.956	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.87:0.004,0.121,0.874	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.957:0,0.042,0.957	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.87:0.004,0.121,0.874	1|1:2:0,0,1	1|1:1.873:0.004,0.119,0.877	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.956:0,0.043,0.956	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.956:0,0.043,0.957	1|1:2:0,0,1	1|1:1.934:0.002,0.062,0.936	0|0:0:1,0,0	1|1:2:0,0,1
+3	16564271	SNP-3.16562915.	A	G	.	PASS	AR2=0.985;DR2=0.986;AF=0.21	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.078:0.924,0.074,0.002	0|0:0.067:0.934,0.065,0.001	0|0:0.077:0.925,0.073,0.002	0|0:0.077:0.925,0.074,0.002	0|0:0.073:0.928,0.07,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	0|0:0.058:0.943,0.056,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.896:0.003,0.098,0.899	1|1:1.929:0.001,0.068,0.931	1|1:1.901:0.002,0.096,0.902	1|1:1.9:0.002,0.097,0.902	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.682:0.318,0.681,0	1|1:2:0,0,1	1|0:0.97:0.033,0.963,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.928:0.001,0.069,0.93	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.933,0.065,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.932:0.001,0.065,0.933	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.917:0.002,0.079,0.919	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.075:0.926,0.072,0.002	0|0:0:1,0,0	0|0:0.075:0.926,0.072,0.002	0|0:0.074:0.928,0.071,0.001	0|0:0.216:0.784,0.216,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.926,0.072,0.002	0|0:0.074:0.927,0.071,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.922:0.002,0.075,0.923	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	0|0:0.091:0.911,0.087,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.914:0.002,0.082,0.916	0|0:0.07:0.932,0.067,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.932:0.001,0.065,0.933	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16566367	SNP-3.16565011.	A	G	.	PASS	AR2=0.867;DR2=0.882;AF=0.288	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.505:0.059,0.377,0.564	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.935:0.285,0.496,0.22	1|0:0.969:0.265,0.501,0.234	0|1:0.89:0.308,0.494,0.198	1|1:2:0,0,1	1|0:0.962:0.269,0.5,0.231	0|0:0:1,0,0	0|1:0.997:0.25,0.502,0.248	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.824:0.363,0.45,0.187	0|0:0:1,0,0	0|0:1.031:0.239,0.491,0.27	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:0.939:0.283,0.496,0.221	1|0:0.939:0.283,0.496,0.221	1|1:1.201:0.155,0.489,0.356	0|1:0.939:0.283,0.496,0.221	1|0:0.954:0.274,0.498,0.228	1|1:2:0,0,1	1|1:1.588:0.043,0.326,0.631	0|0:0:1,0,0	1|1:1.582:0.044,0.33,0.626	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.581:0.044,0.331,0.625	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.577:0.045,0.333,0.622	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.618:0.036,0.311,0.654	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.576:0.045,0.334,0.621	1|1:1.576:0.045,0.334,0.621	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.576:0.045,0.334,0.621	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.576:0.045,0.334,0.621	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.766:0.368,0.498,0.134	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.576:0.045,0.334,0.621	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.939:0.283,0.496,0.221	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.936:0.284,0.496,0.22	0|0:0:1,0,0	0|0:0.936:0.284,0.496,0.22	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.576:0.045,0.334,0.621	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:0.939:0.283,0.496,0.221	0|0:0:1,0,0	0|1:0.935:0.284,0.496,0.22	0|1:1:0,1,0	0|0:0:1,0,0	0|1:0.938:0.283,0.496,0.221	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.576:0.045,0.334,0.621	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.954:0.274,0.498,0.228	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.958:0.272,0.499,0.229	0|1:1.575:0.045,0.334,0.621	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.576:0.045,0.334,0.621	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.576:0.045,0.334,0.621	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.939:0.283,0.496,0.221	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.123:0.194,0.49,0.317	0|1:0.999:0.245,0.511,0.244	0|0:0:1,0,0	0|1:1.123:0.194,0.49,0.317	0|0:0.939:0.283,0.496,0.221	0|0:0:1,0,0	1|0:1.195:0.17,0.465,0.365	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.576:0.045,0.334,0.621	0|0:0:1,0,0	1|1:1.776:0.023,0.178,0.799	0|0:0:1,0,0	1|1:1.576:0.045,0.334,0.621	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.576:0.045,0.334,0.621	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0.246,0.509,0.245	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0
+3	16566848	SNP-3.16565492.	A	G	.	PASS	AR2=0.935;DR2=0.951;AF=0.511	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.892:0.291,0.527,0.183	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.88:0.005,0.111,0.885	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.792:0.008,0.193,0.8	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.369:0.64,0.35,0.009	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.881:0.005,0.11,0.885	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.514:0.559,0.367,0.073	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.755:0.018,0.21,0.772	1|1:2:0,0,1	0|1:1.634:0.032,0.301,0.667	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.832:0.005,0.159,0.836	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.682:0.437,0.445,0.118	1|1:1.77:0.018,0.193,0.788	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.745:0.02,0.216,0.765	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.726:0.019,0.236,0.745	1|1:2:0,0,1	0|0:0.642:0.464,0.43,0.106	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.566:0.051,0.333,0.616	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.127:0.873,0.127,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.366:0.072,0.49,0.438	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.51:0.015,0.461,0.524	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.766:0.306,0.623,0.071	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.871:0.007,0.114,0.879	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.104:0.901,0.095,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.629:0.473,0.424,0.103	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.134:0.183,0.5,0.317	1|1:1.674:0.04,0.247,0.713	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.88:0.005,0.11,0.885	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.954:0.002,0.043,0.956	1|0:1.619:0.034,0.314,0.652	1|1:1.647:0.027,0.299,0.674	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.914,0.075,0.011	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.881:0.005,0.11,0.885	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.698:0.03,0.243,0.728	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.96:0.256,0.528,0.216	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.574:0.048,0.329,0.622	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.707:0.015,0.263,0.722	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.72:0.023,0.235,0.743	1|1:2:0,0,1	0|0:0.102:0.909,0.08,0.011	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.224:0.176,0.425,0.4	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.566:0.051,0.333,0.616	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.629:0.473,0.424,0.103	0|0:0.402:0.613,0.372,0.015	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.62:0.039,0.302,0.659	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.71:0.426,0.438,0.136	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.76:0.03,0.179,0.791	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16569869	SNP-3.16568513.	A	G	.	PASS	AR2=1;DR2=1;AF=0.446	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.952,0.047,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.014:0.986,0.013,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1
+3	16574681	SNP-3.16573325.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.275	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.023:0.977,0.023,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.078:0.923,0.077,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.849:0,0.15,0.849	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.451:0.021,0.508,0.471	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16576245	SNP-3.16574889.	A	G	.	PASS	AR2=1;DR2=1;AF=0.432	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.999:0.001,0.999,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16586851	SNP-3.16585495.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.431	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.924:0.001,0.073,0.926	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0.002,0.995,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.86:0.002,0.136,0.862	1|1:1.83:0.009,0.153,0.839	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.968:0,0.032,0.968	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0.001,0.024,0.975	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	16589439	SNP-3.16588083.	A	G	.	PASS	AR2=0.958;DR2=0.971;AF=0.21	GT:DS:GP	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1.451:0.07,0.41,0.52	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.658:0.034,0.274,0.692	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1.333:0.117,0.434,0.449	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.187:0.822,0.169,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.174:0.834,0.158,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.947,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.077:0.924,0.075,0.001	0|0:0.129:0.875,0.122,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.207:0.804,0.185,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.422:0.644,0.289,0.066	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.47:0.062,0.406,0.532	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.142:0.863,0.132,0.005	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.943,0.055,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.262:0.758,0.223,0.02	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.492:0.579,0.35,0.071	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.159:0.847,0.146,0.007	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.204:0.806,0.184,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.701:0.032,0.235,0.733	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16589518	SNP-3.16588162.	C	A	.	PASS	AR2=0.958;DR2=0.969;AF=0.374	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.604:0.035,0.327,0.638	1|1:1.535:0.054,0.357,0.589	1|1:1.355:0.113,0.419,0.468	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:1.4:0.1,0.399,0.5	0|0:0.024:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.741:0.009,0.24,0.75	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.429:0.203,0.165,0.632	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.686:0.345,0.624,0.031	1|0:1:0,1,0	0|0:0.556:0.454,0.536,0.01	0|1:1.097:0.145,0.614,0.242	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.738:0.011,0.24,0.749	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.16:0.856,0.129,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.409:0.085,0.421,0.494	0|0:0:1,0,0	1|1:1.548:0.042,0.368,0.59	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:0.952:0.084,0.881,0.035	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.118:0.118,0.646,0.236	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.934:0.002,0.061,0.936	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.757:0.014,0.215,0.771	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.852:0.005,0.139,0.857	1|1:1.831:0.001,0.167,0.832	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.749:0.022,0.206,0.772	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.964:0.002,0.032,0.966	0|0:0:1,0,0	1|1:1.89:0.002,0.106,0.892	0|0:0:1,0,0	1|1:1.955:0.002,0.041,0.957	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.742:0.021,0.216,0.763	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.25:0.782,0.185,0.033	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.773:0.023,0.181,0.796	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16589605	SNP-3.16588249.	A	G	.	PASS	AR2=0.996;DR2=0.997;AF=0.298	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.038:0.963,0.037,0	0|0:0.035:0.965,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.935,0.064,0	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.593:0.407,0.593,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.014:0.986,0.013,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.025:0.975,0.024,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.014:0.986,0.013,0	0|0:0.021:0.979,0.021,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.173:0.838,0.15,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16589757	SNP-3.16588401.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.452	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.109:0.892,0.107,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.041:0.959,0.041,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.025:0.976,0.023,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.957,0.042,0.001	1|1:2:0,0,1	0|0:0:1,0,0
+3	16590643	SNP-3.16589287.	A	G	.	PASS	AR2=1;DR2=1;AF=0.492	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16591121	SNP-3.16589765.	A	G	.	PASS	AR2=0.975;DR2=0.98;AF=0.342	GT:DS:GP	0|0:0.033:0.968,0.032,0	0|0:0:1,0,0	0|0:0.031:0.969,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0.018:0.982,0.018,0	0|0:0.055:0.947,0.051,0.002	0|0:0.049:0.952,0.046,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.04:0.96,0.04,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.174:0.84,0.145,0.015	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.555:0.445,0.555,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.187:0.822,0.17,0.009	0|0:0.181:0.827,0.164,0.008	0|0:0.181:0.828,0.164,0.008	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.184:0.825,0.167,0.009	0|1:0.978:0.045,0.932,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.193:0.817,0.174,0.009	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.851:0.008,0.133,0.859	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.208:0.803,0.186,0.011	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.178:0.83,0.162,0.008	0|0:0.026:0.974,0.025,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.046:0.955,0.045,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0.158:0.842,0.158,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.021,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	0|0:0.179:0.829,0.163,0.008	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0.104:0.896,0.104,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.447:0.588,0.378,0.035	0|0:0.099:0.905,0.092,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.093:0.908,0.092,0.001	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.015:0.986,0.014,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.315:0.705,0.274,0.02	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.181:0.827,0.165,0.008	0|0:0.035:0.965,0.035,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.183:0.825,0.166,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.019:0.981,0.018,0	0|0:0.196:0.821,0.161,0.017	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.192:0.817,0.174,0.009	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.234:0.782,0.201,0.017	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16594838	SNP-3.16593482.	C	A	.	PASS	AR2=0.961;DR2=0.969;AF=0.436	GT:DS:GP	1|1:2:0,0,1	1|1:1.977:0,0.022,0.978	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0.235:0.78,0.206,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.685:0.316,0.684,0	0|0:0.305:0.719,0.256,0.025	0|0:0.191:0.818,0.172,0.01	0|0:0.246:0.771,0.213,0.016	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.39:0.646,0.318,0.036	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.167:0.842,0.148,0.009	0|0:0.065:0.937,0.062,0.001	0|0:0.33:0.698,0.274,0.028	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.343:0.687,0.284,0.03	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|1:1:0,1,0	0|0:0.387:0.649,0.315,0.036	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.887:0.182,0.75,0.069	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.386:0.65,0.315,0.036	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.986:0.059,0.895,0.045	0|0:0.185:0.824,0.167,0.009	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.227:0.787,0.199,0.014	0|0:0.313:0.712,0.263,0.025	0|0:0.187:0.822,0.169,0.009	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.16:0.846,0.148,0.006	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.191:0.818,0.172,0.01	0|0:0.465:0.544,0.448,0.009	0|0:0:1,0,0	1|0:0.286:0.726,0.262,0.012	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.021:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.309:0.716,0.259,0.025	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.215:0.798,0.189,0.013	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.07:0.93,0.07,0	0|0:0.119:0.886,0.11,0.004	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.34:0.69,0.281,0.029	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.098:0.907,0.089,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.964:0,0.035,0.965	0|0:0.324:0.703,0.27,0.027	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0.356:0.677,0.289,0.034	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0.31:0.715,0.26,0.025	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.179:0.83,0.161,0.009	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.085:0.916,0.084,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.018,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16598761	SNP-3.16597405.	A	G	.	PASS	AR2=1;DR2=1;AF=0.296	GT:DS:GP	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16599384	SNP-3.16598028.	A	G	.	PASS	AR2=1;DR2=1;AF=0.446	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16600374	SNP-3.16599018.	A	G	.	PASS	AR2=0.915;DR2=0.944;AF=0.342	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.692:0.389,0.53,0.081	0|0:0.164:0.84,0.156,0.004	0|0:0:1,0,0	0|0:0.628:0.47,0.432,0.098	1|1:1.92:0.002,0.077,0.922	0|0:0.182:0.825,0.168,0.007	0|1:0.643:0.465,0.427,0.108	0|1:0.703:0.427,0.442,0.131	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.892:0.291,0.527,0.183	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.553:0.541,0.365,0.094	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.385:0.65,0.315,0.035	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.459:0.583,0.374,0.043	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.317:0.143,0.397,0.46	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:1.001:0.344,0.311,0.345	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.725:0.023,0.229,0.748	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.723:0.398,0.481,0.121	0|0:0.39:0.657,0.295,0.047	0|0:0.227:0.785,0.203,0.012	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.686:0.326,0.662,0.012	1|1:2:0,0,1	0|0:0.636:0.468,0.427,0.104	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.036:0.964,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.266:0.752,0.23,0.018	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.513:0.552,0.383,0.065	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.544:0.537,0.383,0.081	0|0:0.542:0.571,0.317,0.112	1|0:1.204:0.111,0.573,0.316	1|1:2:0,0,1	0|0:0.792:0.389,0.431,0.18	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.536:0.526,0.412,0.062	1|1:2:0,0,1	0|0:0.656:0.46,0.424,0.116	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.712:0.41,0.468,0.122	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.398:0.136,0.33,0.534	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.196:0.103,0.597,0.299	0|0:0:1,0,0	0|0:0.571:0.5,0.429,0.071	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.423:0.645,0.287,0.068	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.207:0.814,0.164,0.021	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16600820	SNP-3.16599464.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.33	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.028,0.972	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.796:0.008,0.189,0.804	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.963,0.037,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.965:0,0.035,0.965	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.951:0.001,0.048,0.952	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16600952	SNP-3.16599596.	A	G	.	PASS	AR2=0.996;DR2=0.996;AF=0.248	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.961,0.039,0	0|0:0:1,0,0	1|1:1.901:0.003,0.093,0.904	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.017:0.983,0.017,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.91:0.002,0.085,0.913	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.137:0.863,0.137,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.904:0.002,0.091,0.907	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.83:0.007,0.156,0.837	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.931:0.002,0.066,0.933	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16601019	SNP-3.16599663.	C	A	.	PASS	AR2=0.991;DR2=0.993;AF=0.476	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.033:0.967,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.285:0.734,0.247,0.019	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.255:0.762,0.22,0.017	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.267:0.751,0.23,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.319:0.69,0.3,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.23:0.782,0.206,0.012	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.252:0.765,0.218,0.017	0|0:0.253:0.764,0.219,0.017	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16601645	SNP-3.16600289.	A	G	.	PASS	AR2=0.989;DR2=0.992;AF=0.215	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.623:0.032,0.313,0.655	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.696:0.017,0.269,0.714	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.786:0.015,0.183,0.802	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.667:0.021,0.29,0.689	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.786:0.015,0.184,0.801	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16602272	SNP-3.16600916.	C	A	.	PASS	AR2=1;DR2=1;AF=0.337	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16608415	SNP-3.16607059.	A	G	.	PASS	AR2=0.986;DR2=0.988;AF=0.314	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.167:0.84,0.154,0.007	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.161:0.845,0.148,0.006	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1.003:0.06,0.876,0.064	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.803:0.014,0.169,0.817	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.122:0.883,0.113,0.004	0|0:0.152:0.853,0.141,0.005	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.139:0.866,0.129,0.005	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.102:0.9,0.099,0.001	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.946:0.001,0.051,0.948	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.956,0.043,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.113:0.891,0.105,0.004	0|0:0.201:0.813,0.173,0.014	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.904:0.002,0.092,0.906	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.947:0,0.053,0.947	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.114:0.889,0.107,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.748:0.002,0.247,0.751	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.069:0.933,0.065,0.002	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.877:0.005,0.112,0.882	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.969:0.001,0.029,0.97	1|1:1.908:0.003,0.085,0.912	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.099:0.904,0.094,0.003	1|1:1.877:0.005,0.113,0.882	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16608823	SNP-3.16607467.	A	G	.	PASS	AR2=0.984;DR2=0.986;AF=0.271	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.813:0.009,0.168,0.822	0|0:0:1,0,0	1|1:1.838:0.009,0.143,0.847	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.815:0.013,0.159,0.828	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.838:0.006,0.15,0.844	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.77:0.017,0.196,0.787	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.725:0.016,0.242,0.742	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.968:0.001,0.031,0.968	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.749:0.016,0.219,0.765	0|1:1:0,1,0	1|1:1.805:0.01,0.175,0.815	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.929:0.003,0.064,0.933	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.976:0,0.024,0.976	1|1:1.79:0.01,0.189,0.8	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.774:0.013,0.201,0.787	0|0:0:1,0,0	1|1:1.833:0.008,0.15,0.841	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.744:0.014,0.229,0.758	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.862:0.012,0.115,0.874	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.962:0.002,0.035,0.964	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16609108	SNP-3.16607752.	C	A	.	PASS	AR2=0.947;DR2=0.961;AF=0.423	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.772:0.046,0.137,0.818	0|0:0.242:0.774,0.211,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.524:0.519,0.438,0.043	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.021:0.322,0.335,0.343	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.366:0.083,0.469,0.448	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.993:0.259,0.49,0.252	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.489:0.518,0.476,0.007	1|0:1:0,1,0	0|0:1.037:0.235,0.492,0.272	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.379:0.657,0.307,0.036	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.34:0.695,0.27,0.035	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.219:0.059,0.662,0.278	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.102:0.173,0.552,0.275	0|0:0:1,0,0	0|1:1.193:0.075,0.656,0.269	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.336:0.121,0.422,0.457	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.295:0.014,0.676,0.31	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.019:0.208,0.564,0.227	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.61:0.007,0.376,0.617	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.915:0.273,0.54,0.188	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.726:0.032,0.211,0.757	0|0:0:1,0,0	1|1:1.989:0,0.011,0.989	1|1:1.98:0,0.02,0.98	1|0:0.968:0.065,0.902,0.033	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.587:0.045,0.323,0.632	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.727:0.03,0.213,0.757	0|0:0:1,0,0	0|0:0.011:0.989,0.01,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.783:0.351,0.515,0.134	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.107:0.898,0.098,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.24:0.771,0.218,0.011	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.187:0.828,0.157,0.015	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.25:0.768,0.213,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.155:0.853,0.139,0.008	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1
+3	16609519	SNP-3.16608163.	A	G	.	PASS	AR2=0.959;DR2=0.967;AF=0.282	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.804:0.007,0.182,0.811	0|0:0.969:0.282,0.466,0.252	1|1:1.893:0.005,0.097,0.898	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.96:0.001,0.038,0.961	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:1.774:0.017,0.191,0.791	1|1:2:0,0,1	1|1:1.905:0.004,0.088,0.909	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.321:0.705,0.269,0.026	0|0:0:1,0,0	0|0:0.273:0.747,0.233,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0.234:0.781,0.205,0.014	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.067:0.046,0.84,0.114	0|0:0.284:0.737,0.242,0.021	0|0:0.231:0.782,0.205,0.013	0|0:0:1,0,0	1|1:1.632:0.052,0.264,0.684	1|1:2:0,0,1	1|1:1.537:0.076,0.312,0.613	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.859:0.245,0.651,0.104	0|0:0.056:0.945,0.054,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.878:0.321,0.48,0.199	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.55:0.067,0.316,0.617	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.815:0.022,0.141,0.837	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.89:0.006,0.097,0.896	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.926:0.003,0.068,0.929	1|1:1.943:0.001,0.055,0.944	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.863:0.004,0.129,0.867	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.904:0.007,0.081,0.912	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.959:0.001,0.039,0.96	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.819:0.032,0.117,0.851	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.642:0.047,0.265,0.689	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.435:0.149,0.267,0.584	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.524:0.07,0.335,0.595	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16612026	SNP-3.16610670.	C	A	.	PASS	AR2=0.987;DR2=0.99;AF=0.451	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.158:0.842,0.158,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.126:0.878,0.117,0.004	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.105:0.896,0.102,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.105:0.896,0.104,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.977:0,0.023,0.977	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.933:0.001,0.064,0.935	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.803:0.001,0.195,0.804	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.855:0.009,0.127,0.864	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.797:0.013,0.177,0.81	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.652:0.522,0.305,0.173	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.679:0.396,0.528,0.076	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.741:0.018,0.223,0.759	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16612581	SNP-3.16611225.	C	A	.	PASS	AR2=0.998;DR2=0.999;AF=0.459	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.975:0,0.024,0.976	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.967:0,0.033,0.967	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.847:0.007,0.139,0.854	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.142:0.871,0.117,0.013	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16612603	SNP-3.16611247.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.496	GT:DS:GP	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:1.969:0,0.031,0.969	0|0:0.089:0.916,0.079,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0.185:0.82,0.174,0.005	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.144:0.861,0.135,0.005	0|0:0.067:0.935,0.063,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.074:0.927,0.071,0.002	0|0:0:1,0,0	0|0:0.07:0.931,0.069,0.001	0|0:0.074:0.927,0.071,0.002	0|1:1:0,1,0	0|0:0.04:0.961,0.038,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.845:0,0.155,0.845	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.199:0.811,0.179,0.01	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.071:0.93,0.068,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.074:0.927,0.072,0.001	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0
+3	16613494	SNP-3.16612138.	A	G	.	PASS	AR2=0.991;DR2=0.992;AF=0.238	GT:DS:GP	0|0:0.036:0.965,0.034,0.001	0|0:0.008:0.992,0.008,0	0|0:0.115:0.888,0.108,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.946,0.053,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.075:0.927,0.072,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.928,0.07,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.075:0.927,0.071,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.072:0.929,0.07,0.001	0|0:0.05:0.952,0.047,0.001	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.003:0.001,0.995,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.019,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.092:0.916,0.077,0.007	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.024:0.976,0.023,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.077:0.924,0.074,0.001	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.074:0.929,0.069,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.082:0.92,0.079,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.031:0.97,0.029,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.059:0.943,0.056,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.086:0.917,0.08,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.261:0.742,0.254,0.003	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0
+3	16614917	SNP-3.16613561.	C	A	.	PASS	AR2=0.947;DR2=0.957;AF=0.281	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.517:0.091,0.302,0.608	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.255:0.748,0.25,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.738:0.032,0.197,0.771	1|0:1.183:0.084,0.65,0.267	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.917:0,0.083,0.917	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.601:0.007,0.385,0.608	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.785:0.322,0.572,0.106	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.119:0.881,0.119,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.935:0.001,0.063,0.936	0|0:0:1,0,0	1|1:1.577:0.033,0.358,0.61	0|0:0:1,0,0	1|1:1.843:0.017,0.123,0.86	1|1:1.742:0.022,0.215,0.764	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.912:0.299,0.491,0.21	1|1:1.698:0.034,0.234,0.732	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.621:0.043,0.292,0.665	0|0:0:1,0,0	1|1:1.736:0.024,0.216,0.76	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.849:0.017,0.117,0.866	1|1:2:0,0,1	1|1:1.853:0,0.147,0.853	1|1:2:0,0,1	1|1:1.643:0.041,0.275,0.684	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.903:0.304,0.489,0.207	1|1:1.716:0.03,0.225,0.746	0|1:0.903:0.304,0.489,0.207	0|0:0:1,0,0	1|0:0.845:0.316,0.524,0.16	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.666:0.045,0.245,0.711	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.073:0.933,0.061,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.909:0.006,0.08,0.915	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.903:0.304,0.489,0.207	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:1.971:0.001,0.027,0.972	0|0:0:1,0,0	1|1:1.779:0.022,0.176,0.801	0|0:0.776:0.447,0.33,0.223	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.929:0.003,0.064,0.933	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.726:0.035,0.204,0.761	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16626255	SNP-3.16624899.	A	G	.	PASS	AR2=1;DR2=1;AF=0.251	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16626456	SNP-3.16625100.	C	A	.	PASS	AR2=1;DR2=1;AF=0.309	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16627656	SNP-3.16626300.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.204	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.865:0.004,0.126,0.869	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.862:0.005,0.128,0.867	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16629653	SNP-3.16628297.	A	G	.	PASS	AR2=0.996;DR2=0.996;AF=0.454	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.968,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.955:0.24,0.564,0.196	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.051:0.95,0.05,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.976:0,0.024,0.976	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.967:0,0.033,0.967	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.019,0.981	1|1:2:0,0,1	1|1:1.974:0,0.025,0.974	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.022:0.005,0.967,0.027	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.947,0.052,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.05:0.951,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.076:0.925,0.075,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.061:0.94,0.059,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.069:0.934,0.063,0.003	1|1:2:0,0,1
+3	16629905	SNP-3.16628549.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.495	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.369:0.742,0.148,0.111	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16630371	SNP-3.16629015.	A	G	.	PASS	AR2=1;DR2=1;AF=0.292	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.987:0.014,0.985,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16630882	SNP-3.16629526.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.232	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.076:0.924,0.076,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.024:0.976,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16633913	SNP-3.16632557.	C	A	.	PASS	AR2=0.952;DR2=0.964;AF=0.382	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.098:0.903,0.096,0.001	0|0:0:1,0,0	0|0:0.227:0.786,0.202,0.013	0|0:0.62:0.498,0.385,0.118	0|0:0.219:0.793,0.195,0.012	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.167:0.841,0.152,0.008	0|0:0.201:0.807,0.186,0.007	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.345:0.684,0.287,0.029	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.116:0.887,0.111,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.942,0.056,0.002	1|0:0.375:0.629,0.368,0.003	0|0:0.15:0.857,0.136,0.007	0|0:0:1,0,0	0|0:0.218:0.789,0.204,0.007	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.203:0.809,0.18,0.012	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.188:0.821,0.17,0.009	0|0:0:1,0,0	0|0:0.441:0.606,0.346,0.047	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.148:0.858,0.137,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.17:0.837,0.157,0.007	0|0:0.482:0.578,0.363,0.059	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.085:0.917,0.081,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.143:0.862,0.133,0.005	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.026:0.974,0.025,0	0|0:0.006:0.994,0.006,0	0|0:0.022:0.979,0.021,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.956:0,0.044,0.956	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.068:0.934,0.064,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.036:0.966,0.033,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.421:0.619,0.342,0.039	0|0:0:1,0,0	0|0:0.51:0.557,0.375,0.067	0|0:0.129:0.875,0.121,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.15:0.856,0.137,0.007	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.608:0.495,0.403,0.102	0|0:0.122:0.882,0.114,0.004	0|0:0.125:0.879,0.116,0.005	0|0:0.459:0.595,0.351,0.054	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.227:0.798,0.178,0.025	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.114:0.892,0.103,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.356:0.66,0.324,0.016	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.138:0.867,0.129,0.005	0|0:0.145:0.862,0.13,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.35:0.678,0.294,0.028	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0.11:0.893,0.103,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.252:0.781,0.185,0.034	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.1:0.905,0.09,0.005	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.055:0.945,0.055,0	1|1:2:0,0,1	0|0:0.403:0.641,0.315,0.044	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16635723	SNP-3.16634367.	A	G	.	PASS	AR2=1;DR2=1;AF=0.278	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16636564	SNP-3.16635208.	A	G	.	PASS	AR2=0.999;DR2=1;AF=0.286	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.093:0.912,0.083,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16636964	SNP-3.16635608.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.454	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.06:0.94,0.06,0	0|0:0.022:0.978,0.021,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.677:0.033,0.257,0.71	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.972:0,0.028,0.972	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.52:0.108,0.264,0.628	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.223:0.796,0.185,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.017:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16638512	SNP-3.16637156.	A	G	.	PASS	AR2=1;DR2=1;AF=0.492	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16638642	SNP-3.16637286.	A	G	.	PASS	AR2=0.951;DR2=0.964;AF=0.416	GT:DS:GP	0|0:0.117:0.893,0.098,0.009	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.736:0.442,0.38,0.178	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.386:0.665,0.285,0.051	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.213:0.799,0.189,0.012	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.937:0.001,0.062,0.937	0|1:1.261:0.12,0.5,0.381	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.745:0.016,0.222,0.761	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.327:0.108,0.456,0.435	1|1:1.644:0.037,0.283,0.681	1|1:2:0,0,1	1|1:1.748:0.016,0.22,0.764	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.184:0.165,0.486,0.349	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.371:0.118,0.393,0.489	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.76:0.015,0.211,0.775	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1.484:0.046,0.424,0.53	1|1:1.718:0.02,0.242,0.738	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.729:0.019,0.233,0.748	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.652:0.029,0.29,0.681	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.817:0.009,0.166,0.825	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.915:0.002,0.08,0.918	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.763:0.014,0.209,0.777	0|0:0.249:0.767,0.216,0.016	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:0.478:0.563,0.396,0.041	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.078:0.923,0.077,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.468:0.064,0.405,0.531	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.817:0.009,0.166,0.825	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.724:0.035,0.205,0.76	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.938:0.001,0.06,0.939	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.138:0.189,0.483,0.328	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.236:0.157,0.45,0.393	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16639411	SNP-3.16638055.	A	G	.	PASS	AR2=0.961;DR2=0.969;AF=0.262	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.975:0.001,0.023,0.976	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.662:0.449,0.44,0.111	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.736:0.403,0.459,0.139	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.7:0.423,0.455,0.123	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.749:0.392,0.467,0.141	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:0.695:0.426,0.453,0.121	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.696:0.425,0.454,0.121	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.424:0.59,0.396,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0.73:0.412,0.447,0.142	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:0.696:0.425,0.454,0.121	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.793:0.371,0.466,0.163	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.024:0.977,0.022,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.696:0.425,0.454,0.121	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16642376	SNP-3.16641020.	A	G	.	PASS	AR2=0.944;DR2=0.959;AF=0.278	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.023,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.554:0.025,0.395,0.58	0|0:0:1,0,0	1|1:1.565:0.064,0.308,0.628	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.149:0.209,0.432,0.358	0|1:1.174:0.16,0.507,0.334	1|1:1.736:0.018,0.228,0.754	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.76:0.376,0.487,0.137	0|0:0:1,0,0	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.8:0.013,0.174,0.813	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.803:0.011,0.176,0.813	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.795:0.421,0.362,0.216	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.068:0.935,0.062,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.963,0.037,0	0|0:0:1,0,0	0|0:0.068:0.935,0.062,0.003	0|0:0:1,0,0	0|0:0.211:0.791,0.207,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.082:0.918,0.082,0	1|0:1:0,1,0	0|0:0.093:0.911,0.085,0.004	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.305:0.706,0.284,0.011	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.014:0.986,0.013,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0.059:0.943,0.056,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.959,0.039,0.002	0|0:0.08:0.922,0.077,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.087:0.917,0.08,0.003	0|0:0:1,0,0	1|1:1.891:0.006,0.097,0.897	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.88:0.006,0.108,0.886	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.42:0.104,0.371,0.524	0|0:0.043:0.959,0.039,0.002	1|1:1.765:0.018,0.199,0.783	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.818:0.009,0.164,0.827	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.803:0.008,0.181,0.811	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.438:0.136,0.29,0.574	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.794:0.009,0.189,0.803	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.885:0.006,0.103,0.891	0|0:0:1,0,0	1|0:1.367:0.126,0.381,0.493	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.81:0.013,0.165,0.822	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.087:0.917,0.08,0.003	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.031:0.969,0.03,0.001	0|0:0:1,0,0	0|0:0.024:0.976,0.023,0	1|1:2:0,0,1	0|0:0.057:0.945,0.053,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.31:0.148,0.394,0.458	0|0:0:1,0,0	0|0:0:1,0,0
+3	16643300	SNP-3.16641944.	C	A	.	PASS	AR2=1;DR2=1;AF=0.288	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.941:0,0.059,0.941	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16643982	SNP-3.16642626.	A	G	.	PASS	AR2=0.935;DR2=0.951;AF=0.539	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.105:0.901,0.093,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:1.82:0.008,0.165,0.827	1|1:1.453:0.079,0.389,0.532	0|0:0.247:0.768,0.218,0.015	1|1:2:0,0,1	0|0:0.533:0.55,0.367,0.083	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.354:0.68,0.287,0.034	0|0:0:1,0,0	1|1:1.666:0.036,0.263,0.702	1|0:0.979:0.126,0.77,0.104	1|1:1.825:0.008,0.158,0.833	1|0:0.739:0.399,0.464,0.137	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.91:0.001,0.087,0.911	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.123:0.113,0.651,0.236	1|1:2:0,0,1	1|1:1.885:0.004,0.108,0.888	1|1:1.95:0.001,0.049,0.95	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.923:0.002,0.072,0.925	1|1:1.97:0,0.029,0.971	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.533:0.016,0.435,0.549	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.976:0,0.023,0.977	1|1:1.98:0,0.02,0.98	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.963:0.001,0.036,0.964	1|1:1.981:0,0.019,0.981	1|1:1.986:0,0.013,0.987	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.027,0.972	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.076:0.349,0.227,0.425	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:0.808:0.268,0.656,0.076	0|0:0:1,0,0	0|0:0.095:0.907,0.092,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.397:0.005,0.593,0.402	0|0:0.341:0.667,0.326,0.008	0|0:0:1,0,0	1|1:1.785:0.008,0.199,0.793	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.979:0,0.021,0.979	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.041:0.96,0.038,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.611:0.005,0.379,0.616	0|0:0:1,0,0	0|0:0.275:0.769,0.188,0.043	1|1:1.902:0.001,0.096,0.903	1|1:2:0,0,1	1|1:1.726:0.002,0.27,0.728	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.052:0.949,0.05,0.001	1|1:1.984:0,0.016,0.984	1|1:1.68:0.014,0.291,0.694	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.606:0.504,0.385,0.111	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.058:0.944,0.055,0.001	1|1:2:0,0,1	1|0:1.039:0.233,0.495,0.272	1|1:2:0,0,1	1|1:1.748:0.021,0.209,0.77	1|1:1.895:0.003,0.1,0.897	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	1|1:1.981:0,0.018,0.982	1|0:0.915:0.193,0.7,0.107	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.514:0.032,0.423,0.545	1|0:1.18:0.098,0.623,0.278	0|1:1.433:0.066,0.435,0.499	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.97:0,0.03,0.97	1|1:1.807:0.009,0.175,0.816	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.969:0,0.031,0.969	1|1:2:0,0,1	0|1:0.963:0.309,0.418,0.272	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.764:0.017,0.203,0.781	1|1:2:0,0,1	1|1:1.849:0.006,0.138,0.855	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0,0.025,0.975	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.746:0.376,0.503,0.122	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.838:0.013,0.136,0.851	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.093:0.915,0.077,0.008	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.948:0.001,0.05,0.949	1|1:1.949:0.001,0.048,0.951	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16646620	SNP-3.16645264.	A	G	.	PASS	AR2=0.916;DR2=0.935;AF=0.206	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.963,0.035,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.099:0.153,0.594,0.252	1|1:2:0,0,1	0|0:0.404:0.619,0.359,0.023	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.196:0.825,0.155,0.021	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.682:0.416,0.487,0.097	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.115:0.889,0.106,0.005	0|0:0:1,0,0	0|1:0.664:0.358,0.62,0.022	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.37:0.126,0.377,0.497	0|1:0.866:0.22,0.694,0.086	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.502:0.556,0.385,0.059	0|0:0.095:0.907,0.091,0.002	1|1:2:0,0,1	0|0:0.268:0.751,0.231,0.018	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	1|0:1.122:0.196,0.486,0.318	0|0:0.365:0.669,0.296,0.035	0|1:0.321:0.705,0.269,0.026	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.308:0.716,0.26,0.024	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.173:0.192,0.443,0.365	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.714:0.376,0.535,0.089	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:1.198:0.161,0.481,0.359	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.082:0.919,0.079,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0.062:0.939,0.061,0	0|0:0.147:0.856,0.141,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.966,0.032,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.952,0.047,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.071:0.929,0.071,0	0|0:0.303:0.72,0.256,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.113:0.888,0.11,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.109:0.896,0.098,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.93,0.067,0.003	1|0:0.922:0.233,0.613,0.155	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.686:0.443,0.429,0.128	0|0:0:1,0,0	0|0:0.144:0.862,0.131,0.007	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.238:0.247,0.269,0.485	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.062:0.938,0.062,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.081:0.921,0.077,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.304:0.72,0.256,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.057:0.208,0.526,0.266	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.085:0.917,0.08,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.928,0.07,0.001	0|0:0.362:0.672,0.294,0.034	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0.08:0.928,0.064,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.953,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.059:0.943,0.056,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.953,0.046,0.001	0|0:0:1,0,0
+3	16647194	SNP-3.16645838.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.219	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.9:0.003,0.094,0.903	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.904:0.104,0.887,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16647665	SNP-3.16646309.	C	A	.	PASS	AR2=1;DR2=1;AF=0.504	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.996:0,0.003,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.027:0.002,0.97,0.028	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16650006	SNP-3.16648650.	A	G	.	PASS	AR2=0.944;DR2=0.959;AF=0.408	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.629:0.035,0.301,0.664	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.8:0.007,0.185,0.807	0|1:1:0.263,0.474,0.263	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1.18:0.174,0.472,0.354	1|1:1.382:0.098,0.422,0.48	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.661:0.009,0.32,0.67	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.971:0,0.028,0.971	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.649:0.03,0.291,0.679	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.659:0.029,0.284,0.687	1|1:1.598:0.042,0.319,0.639	1|1:2:0,0,1	1|1:1.645:0.032,0.292,0.676	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.99:0,0.01,0.99	1|1:1.942:0.004,0.049,0.946	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.624:0.037,0.302,0.661	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1.677:0.027,0.27,0.704	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.659:0.03,0.282,0.689	1|1:1.99:0,0.009,0.991	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.061:0.223,0.492,0.284	1|1:1.354:0.102,0.442,0.456	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.71:0.015,0.259,0.725	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.902:0.003,0.091,0.906	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.627:0.038,0.297,0.665	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.643:0.032,0.292,0.675	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.729:0.007,0.257,0.736	1|1:1.387:0.096,0.421,0.483	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.51:0.064,0.362,0.574	1|1:2:0,0,1	1|1:1.959:0.001,0.039,0.96	0|0:0:1,0,0	1|1:1.418:0.087,0.408,0.505	1|1:1.623:0.036,0.305,0.659	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.646:0.032,0.29,0.678	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.582:0.045,0.328,0.627	1|1:1.672:0.035,0.258,0.707	1|1:1.974:0,0.025,0.975	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16650432	SNP-3.16649076.	A	G	.	PASS	AR2=0.996;DR2=0.997;AF=0.496	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.293:0.719,0.27,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.901:0.003,0.094,0.903	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.959:0.001,0.04,0.959	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.972:0,0.027,0.973	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:1.909:0.002,0.087,0.911	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.894:0.003,0.1,0.897	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.039:0.961,0.039,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.996:0.004,0.996,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.98:0,0.019,0.981	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.921:0.002,0.074,0.923	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16652819	SNP-3.16651463.	A	G	.	PASS	AR2=0.812;DR2=0.867;AF=0.213	GT:DS:GP	0|0:0.333:0.718,0.232,0.05	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.212:0.8,0.188,0.012	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.356:0.108,0.429,0.464	0|1:0.802:0.359,0.479,0.161	1|0:1.106:0.216,0.461,0.322	0|0:0.411:0.664,0.261,0.075	1|1:2:0,0,1	1|1:1.351:0.121,0.407,0.472	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.248:0.061,0.63,0.309	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.06:0.943,0.054,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.468:0.587,0.358,0.055	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.488:0.571,0.369,0.06	0|0:0.51:0.557,0.377,0.066	0|0:0:1,0,0	0|0:0.465:0.589,0.357,0.054	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.464:0.59,0.356,0.054	1|1:2:0,0,1	0|0:0.483:0.576,0.366,0.059	0|0:0:1,0,0	0|0:0.488:0.572,0.369,0.06	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.497:0.567,0.369,0.064	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.269:0.75,0.232,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.516:0.533,0.419,0.048	0|0:0:1,0,0	0|0:0.192:0.819,0.17,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.197:0.819,0.164,0.016	1|0:0.618:0.463,0.457,0.08	0|0:0:1,0,0	1|0:0.53:0.501,0.469,0.031	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.141:0.863,0.133,0.004	0|0:0:1,0,0	0|0:0.03:0.97,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.376:0.658,0.309,0.034	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.675:0.525,0.276,0.199	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.281:0.739,0.24,0.02	0|0:0.476:0.563,0.398,0.039	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.375:0.638,0.35,0.012	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.488:0.572,0.369,0.06	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.583:0.5,0.416,0.083	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.303:0.723,0.25,0.026	0|0:0.025:0.975,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.835:0.402,0.361,0.237	0|1:1.135:0.204,0.458,0.339	0|0:0.672:0.444,0.44,0.116	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.447:0.604,0.346,0.051	0|0:0:1,0,0	1|0:0.488:0.572,0.369,0.06	0|0:0.5:0.562,0.375,0.063	1|1:2:0,0,1	0|0:0.11:0.896,0.099,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.133:0.873,0.12,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.325:0.111,0.454,0.435	0|0:0:1,0,0	0|0:0.194:0.815,0.176,0.009	1|1:2:0,0,1	0|0:0.347:0.677,0.299,0.024	0|0:0.283:0.725,0.267,0.008	1|0:0.563:0.516,0.406,0.079	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.947:0.282,0.489,0.229	1|0:0.866:0.266,0.602,0.132	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.488:0.572,0.369,0.06	0|0:0.151:0.859,0.132,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.471:0.588,0.352,0.06	0|0:0.409:0.644,0.304,0.052	0|0:0.488:0.572,0.369,0.06	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.517:0.555,0.373,0.072	0|0:0:1,0,0	1|0:0.683:0.375,0.568,0.057	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.996:0.261,0.482,0.257	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.784:0.373,0.47,0.157	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.112:0.892,0.104,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.965,0.034,0.001	0|0:0.036:0.965,0.034,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.181:0.827,0.165,0.008	0|0:0:1,0,0	0|0:0.488:0.572,0.369,0.06	0|0:0:1,0,0	0|0:0.106:0.904,0.085,0.011	0|0:0:1,0,0	0|0:0:1,0,0
+3	16654501	SNP-3.16653145.	C	A	.	PASS	AR2=0.958;DR2=0.969;AF=0.426	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.707:0.029,0.234,0.737	1|1:1.67:0.045,0.241,0.714	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.72:0.017,0.245,0.737	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.56:0.029,0.381,0.59	1|1:1.985:0,0.015,0.985	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.713:0.011,0.266,0.723	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.818:0.007,0.169,0.824	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.608:0.045,0.303,0.652	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.756:0.015,0.214,0.771	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.642:0.031,0.296,0.673	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.541:0.471,0.517,0.012	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.757:0.011,0.221,0.768	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.463:0.038,0.46,0.501	1|1:2:0,0,1	1|0:1.553:0.064,0.319,0.617	1|1:2:0,0,1	1|1:1.87:0.004,0.122,0.874	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.761:0.015,0.208,0.777	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.721:0.016,0.247,0.737	0|0:0.711:0.567,0.155,0.278	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.673:0.027,0.273,0.7	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.675:0.013,0.299,0.688	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.739:0.018,0.224,0.758	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.794:0.012,0.182,0.806	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.889:0.005,0.102,0.893	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.923:0.004,0.07,0.926	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.837:0.009,0.144,0.846	0|0:0:1,0,0	1|1:1.835:0.006,0.154,0.84	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.951:0,0.049,0.951	1|1:2:0,0,1	1|1:1.908:0.006,0.08,0.914	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.319:0.119,0.443,0.438	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.652:0.035,0.277,0.688	0|0:0:1,0,0
+3	16655352	SNP-3.16653996.	C	A	.	PASS	AR2=1;DR2=1;AF=0.498	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.976:0,0.023,0.976	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16659023	SNP-3.16657667.	A	G	.	PASS	AR2=0.976;DR2=0.976;AF=0.413	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1.02:0.24,0.5,0.26	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.022:0.239,0.5,0.261	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1.029:0.236,0.5,0.265	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.002:0,0.997,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.022:0.239,0.5,0.261	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1.076:0.212,0.5,0.288	1|0:1.022:0.239,0.5,0.261	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1.022:0.239,0.5,0.261	1|0:1.022:0.239,0.5,0.261	0|0:0:1,0,0	0|1:1.022:0.239,0.5,0.261	1|1:1.022:0.239,0.5,0.261	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0
+3	16659994	SNP-3.16658638.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.327	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.219:0.791,0.199,0.01	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16661316	SNP-3.16659960.	A	G	.	PASS	AR2=0.99;DR2=0.993;AF=0.468	GT:DS:GP	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.847:0.016,0.122,0.862	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.578:0.502,0.418,0.08	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.938:0.001,0.06,0.939	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.332:0.25,0.167,0.583	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.056:0.944,0.056,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.852:0.006,0.136,0.858	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.936:0.002,0.06,0.938	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16662852	SNP-3.16661496.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.331	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.308:0.085,0.522,0.393	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.017:0.983,0.016,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16668298	SNP-3.16666942.	A	G	.	PASS	AR2=0.988;DR2=0.989;AF=0.516	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.977:0,0.022,0.977	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.977:0,0.023,0.977	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.967:0,0.032,0.968	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	1|1:1.962:0,0.037,0.962	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0,0.031,0.968	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.821:0.009,0.162,0.829	1|1:2:0,0,1	1|1:1.83:0.009,0.152,0.839	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.725:0.008,0.259,0.733	1|1:1.869:0.007,0.118,0.875	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.824:0.01,0.156,0.834	1|1:2:0,0,1	1|1:1.919:0.004,0.073,0.923	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.781:0.017,0.184,0.799	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.837:0.007,0.148,0.845	1|1:1.82:0.01,0.16,0.83	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.937:0.004,0.056,0.941	1|1:2:0,0,1	1|1:1.902:0,0.097,0.902	1|1:2:0,0,1	1|1:1.954:0,0.045,0.955	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.858:0.012,0.118,0.87	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.829:0.01,0.151,0.839	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.966:0,0.033,0.967	1|1:2:0,0,1	1|1:1.968:0,0.032,0.968	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0,0.031,0.968	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.823:0.01,0.157,0.833	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.817:0.01,0.163,0.827	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.963:0,0.036,0.964	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0,0.031,0.968	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.982:0,0.017,0.983	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.96:0.001,0.038,0.961	1|1:2:0,0,1	0|0:0.021:0.979,0.02,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16670653	SNP-3.16669297.	C	A	.	PASS	AR2=1;DR2=1;AF=0.428	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.982:0,0.017,0.983	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.976:0,0.024,0.976	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16671466	SNP-3.16670110.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.493	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.946,0.053,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.053:0.947,0.052,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.929,0.069,0.002	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.086:0.915,0.083,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.869:0.003,0.126,0.872	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.083:0.919,0.079,0.002	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.946,0.054,0.001	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.956,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16671695	SNP-3.16670339.	A	G	.	PASS	AR2=0.983;DR2=0.985;AF=0.5	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.805:0.002,0.19,0.808	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.971:0,0.028,0.972	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.982:0,0.018,0.982	1|1:1.982:0,0.018,0.982	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.979:0,0.021,0.979	1|1:1.905:0.001,0.093,0.906	1|1:1.982:0,0.018,0.982	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.882:0.004,0.111,0.886	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.885:0.003,0.108,0.888	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.883:0.003,0.11,0.886	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.873:0.004,0.118,0.878	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.841:0.008,0.144,0.849	1|1:1.873:0.004,0.118,0.878	1|1:1.853:0.007,0.134,0.86	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.87:0.005,0.121,0.875	1|1:1.881:0.004,0.112,0.884	1|1:1.87:0.004,0.121,0.874	1|1:1.882:0.004,0.111,0.886	1|1:1.873:0.004,0.118,0.878	0|1:1:0,1,0	1|1:1.894:0.003,0.1,0.897	1|1:1.828:0.007,0.157,0.836	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.923:0.001,0.075,0.924	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.218:0.782,0.217,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.242:0.044,0.67,0.286	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.869:0.004,0.122,0.874	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.906:0.005,0.084,0.911	1|1:1.857:0.005,0.133,0.862	1|1:1.842:0.006,0.146,0.848	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.977:0,0.022,0.978	1|1:1.868:0.002,0.129,0.87	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.902:0.003,0.093,0.904	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.838:0.008,0.146,0.846	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.853:0.006,0.134,0.86	1|1:1.957:0.001,0.041,0.958	0|0:0:1,0,0	1|1:1.982:0,0.018,0.982
+3	16679391	SNP-3.16678035.	C	A	.	PASS	AR2=1;DR2=1;AF=0.459	GT:DS:GP	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16682908	SNP-3.16681552.	A	G	.	PASS	AR2=0.851;DR2=0.865;AF=0.344	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.606:0.041,0.312,0.647	1|1:1.556:0.042,0.359,0.599	0|0:0:1,0,0	0|1:1.259:0.078,0.586,0.337	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.514:0.055,0.375,0.569	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.716:0.024,0.236,0.74	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.722:0.024,0.23,0.746	0|0:0:1,0,0	1|1:1.673:0.031,0.265,0.704	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.595:0.038,0.329,0.633	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.142:0.186,0.487,0.328	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.299:0.129,0.443,0.428	1|1:2:0,0,1	0|1:1.126:0.191,0.493,0.316	1|1:2:0,0,1	1|0:1.122:0.194,0.49,0.316	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1.213:0.155,0.477,0.368	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:0.993:0.243,0.522,0.236	0|0:1.104:0.201,0.495,0.304	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.136:0.187,0.489,0.323	1|0:1.108:0.202,0.487,0.311	0|0:0:1,0,0	1|0:0.967:0.274,0.485,0.241	0|1:1.108:0.201,0.491,0.308	0|1:1.138:0.181,0.5,0.319	0|1:0.959:0.28,0.48,0.239	0|1:1.017:0.268,0.447,0.285	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.1:0.204,0.493,0.304	1|1:2:0,0,1	1|1:1.108:0.2,0.491,0.309	0|0:0:1,0,0	0|1:1.037:0.248,0.467,0.285	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.473:0.049,0.43,0.521	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:1.108:0.2,0.491,0.309	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.084:0.209,0.498,0.293	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.014:0.248,0.491,0.261	0|0:0:1,0,0	1|0:1.096:0.201,0.503,0.296	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.137:0.188,0.487,0.325	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.037:0.235,0.494,0.272	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.768:0.02,0.192,0.788	1|1:2:0,0,1	1|1:1.108:0.2,0.491,0.309	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.018:0.236,0.509,0.255	0|0:0:1,0,0	0|0:0:1,0,0	0|0:1.014:0.248,0.491,0.261	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1.356:0.052,0.54,0.408	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.169:0.176,0.479,0.345	0|1:1:0,1,0	0|1:0.918:0.287,0.509,0.204	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.817:0.374,0.436,0.19	1|1:1.688:0.027,0.259,0.715	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.226:0.166,0.442,0.392	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.824:0.369,0.438,0.193	0|1:1.004:0.239,0.517,0.244	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.722:0.024,0.23,0.746	1|1:1.695:0.027,0.25,0.722	1|1:1.695:0.027,0.25,0.722	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.174:0.174,0.477,0.348	0|1:1.169:0.176,0.479,0.345	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.132:0.189,0.489,0.322	1|0:1.108:0.2,0.491,0.309	1|1:1.159:0.179,0.483,0.338	1|1:1.181:0.171,0.477,0.352	0|1:1.169:0.176,0.479,0.345	1|1:1.142:0.186,0.485,0.329	0|1:1.12:0.195,0.49,0.315	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.293:0.132,0.444,0.424	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:1.014:0.248,0.491,0.261	1|1:1.721:0.024,0.231,0.745	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:1.064:0.23,0.476,0.294	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16685894	SNP-3.16684538.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.334	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.788:0.007,0.199,0.795	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.958:0.001,0.04,0.959	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16685989	SNP-3.16684633.	A	G	.	PASS	AR2=0.845;DR2=0.877;AF=0.313	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	1|0:1.127:0.19,0.492,0.317	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.101:0.201,0.498,0.302	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.043:0.23,0.498,0.273	0|1:1.174:0.173,0.48,0.347	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.269:0.144,0.444,0.413	0|1:1.043:0.23,0.498,0.273	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.721:0.021,0.237,0.742	1|1:2:0,0,1	1|1:1.635:0.034,0.298,0.669	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.58:0.047,0.327,0.627	1|1:1.599:0.041,0.319,0.64	0|1:1.576:0.035,0.354,0.611	1|1:2:0,0,1	0|1:0.548:0.51,0.433,0.058	0|1:1.045:0.002,0.951,0.047	0|0:0:1,0,0	1|1:1.635:0.042,0.281,0.677	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.667:0.027,0.278,0.694	1|1:1.573:0.045,0.337,0.618	1|0:1.076:0.124,0.677,0.2	1|0:0.533:0.479,0.51,0.012	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.258:0.095,0.552,0.353	1|0:1.556:0.054,0.337,0.609	1|1:1.655:0.034,0.278,0.688	1|1:2:0,0,1	1|1:1.732:0.024,0.219,0.756	1|1:1.627:0.035,0.303,0.662	1|1:1.481:0.076,0.367,0.557	1|1:1.641:0.032,0.295,0.673	1|1:1.72:0.022,0.236,0.742	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.588:0.052,0.308,0.64	1|1:1.655:0.028,0.289,0.683	1|1:1.571:0.049,0.332,0.62	0|0:0.681:0.415,0.489,0.096	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.721:0.022,0.236,0.742	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.75:0.016,0.217,0.766	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.084:0.916,0.084,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.573:0.048,0.33,0.622	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|1:1.045:0.229,0.498,0.273	1|1:1.043:0.23,0.498,0.273	0|0:0:1,0,0	0|0:0.399:0.662,0.276,0.062	0|1:1.043:0.23,0.498,0.273	1|0:1.117:0.192,0.5,0.309	1|1:1.146:0.177,0.501,0.322	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.726:0.502,0.271,0.227	1|1:2:0,0,1	1|1:1.658:0.03,0.282,0.688	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.667:0.029,0.274,0.697	0|0:0:1,0,0	1|0:1.585:0.047,0.322,0.632	0|0:0:1,0,0	0|0:0.506:0.549,0.397,0.055	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.114:0.196,0.495,0.309	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:1.045:0.265,0.426,0.309	0|0:0.606:0.556,0.282,0.162	1|1:2:0,0,1	1|1:1.712:0.026,0.235,0.739	1|1:1.624:0.036,0.305,0.66	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.043:0.23,0.498,0.273	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:1.058:0.222,0.498,0.28	0|1:1.058:0.222,0.498,0.28	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.043:0.23,0.498,0.273	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.367:0.143,0.347,0.51	0|0:0.383:0.662,0.293,0.045	1|1:1.581:0.047,0.324,0.628	0|0:0:1,0,0	0|0:0.205:0.829,0.137,0.034	0|0:0.383:0.662,0.293,0.045	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.42:0.63,0.321,0.05	0|0:0.383:0.662,0.293,0.045	1|1:2:0,0,1	1|1:1.471:0.073,0.383,0.544	1|1:2:0,0,1	0|0:0.445:0.61,0.335,0.055	0|0:0.333:0.715,0.236,0.049	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.346:0.105,0.444,0.451	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.82:0.014,0.152,0.834
+3	16688049	SNP-3.16686693.	C	A	.	PASS	AR2=0.963;DR2=0.976;AF=0.244	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.505:0.044,0.406,0.55	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.082:0.214,0.49,0.296	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.117:0.017,0.85,0.133	1|1:2:0,0,1	1|1:1.606:0.059,0.277,0.664	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.127:0.873,0.127,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.384:0.7,0.216,0.084	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.967:0,0.032,0.967	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.806:0.012,0.169,0.819	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.983:0,0.017,0.983	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.672:0.073,0.182,0.745	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.92:0.387,0.305,0.308	0|0:0.501:0.499,0.501,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.76:0.452,0.337,0.211	0|0:0:1,0,0
+3	16688126	SNP-3.16686770.	C	A	.	PASS	AR2=0.998;DR2=0.999;AF=0.477	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.426:0.627,0.321,0.052	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16692659	SNP-3.16691304.	C	A	.	PASS	AR2=0.992;DR2=0.993;AF=0.428	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.118:0.882,0.118,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.479:0.054,0.413,0.533	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.915:0.003,0.08,0.917	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.974:0,0.026,0.974	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.981:0,0.018,0.981	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.868:0.003,0.126,0.871	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.886:0.005,0.105,0.89	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.841:0.003,0.153,0.844	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.026:0.288,0.399,0.313	0|0:0:1,0,0
+3	16694934	SNP-3.16693579.	A	G	.	PASS	AR2=0.996;DR2=0.996;AF=0.211	GT:DS:GP	0|0:0.054:0.947,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.003:0.015,0.966,0.018	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.943,0.056,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.952,0.048,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.044:0.957,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.958,0.042,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.956,0.044,0	0|0:0.055:0.946,0.053,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.965,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.937:0,0.063,0.937	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.103:0.898,0.101,0.001	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16705256	SNP-3.16703901.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.381	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.13:0.87,0.13,0	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.803:0.002,0.193,0.805	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.134:0.866,0.133,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16705740	SNP-3.16704385.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.466	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.949:0,0.051,0.949	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1.221:0.001,0.777,0.222	1|1:1.978:0,0.022,0.978	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.03:0.97,0.03,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.043:0.957,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.074:0.933,0.06,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16705901	SNP-3.16704546.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.469	GT:DS:GP	1|1:1.997:0,0.002,0.997	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.064:0.937,0.062,0.001	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.999:0,0.001,0.999	0|0:0.058:0.942,0.057,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.051:0.949,0.05,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0.017,0.966,0.017	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.055:0.945,0.054,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.07:0.931,0.068,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.032:0.969,0.031,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16708508	SNP-3.16707153.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.359	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.09:0.912,0.087,0.001	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.109:0.896,0.099,0.005	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.067:0.934,0.065,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.042:0.959,0.041,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.077:0.924,0.076,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16709942	SNP-3.16708587.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.477	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.072:0.929,0.07,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.937,0.063,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.031:0.969,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.066:0.934,0.065,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.955,0.044,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.064:0.936,0.064,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16711077	SNP-3.16709722.	A	G	.	PASS	AR2=0.948;DR2=0.963;AF=0.28	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.485:0.066,0.382,0.552	1|1:1.495:0.064,0.377,0.559	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.493:0.064,0.378,0.558	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.486:0.066,0.382,0.552	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.02:0.98,0.02,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.49:0.065,0.38,0.555	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.484:0.067,0.383,0.55	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.043:0.958,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.949:0.001,0.049,0.95	1|1:1.819:0.017,0.146,0.836	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.586:0.045,0.324,0.631	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.105:0.896,0.102,0.002	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.73:0.01,0.25,0.74	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.607:0.049,0.294,0.656	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.485:0.066,0.382,0.551	1|1:1.485:0.066,0.382,0.552	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.498:0.063,0.376,0.561	1|0:1:0,1,0	1|1:1.521:0.057,0.364,0.578	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1.323:0.106,0.465,0.429	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.934:0.002,0.062,0.936	1|1:1.808:0.02,0.151,0.828	1|1:1.945:0.002,0.051,0.947	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.636:0.039,0.286,0.675	1|1:2:0,0,1	1|1:1.99:0,0.009,0.99	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.58:0.043,0.333,0.623	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16711383	SNP-3.16710028.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.481	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.036:0.966,0.033,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.011:0.989,0.011,0	1|1:2:0,0,1	0|0:0.106:0.895,0.103,0.001	0|0:0:1,0,0	0|0:0.088:0.913,0.086,0.001	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16712609	SNP-3.16711254.	A	G	.	PASS	AR2=0.928;DR2=0.94;AF=0.239	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.873:0.316,0.496,0.189	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.244:0.765,0.227,0.008	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.531:0.613,0.244,0.143	0|0:0:1,0,0	1|0:1.23:0.138,0.495,0.368	1|0:1.147:0.184,0.486,0.33	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.089:0.211,0.489,0.3	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.79:0.031,0.147,0.821	1|0:1.124:0.195,0.486,0.319	1|1:2:0,0,1	0|1:1.216:0.15,0.484,0.366	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.01:0.99,0.01,0	1|0:0.657:0.425,0.493,0.082	0|0:0.333:0.68,0.307,0.013	1|0:0.656:0.375,0.593,0.031	0|0:0.022:0.978,0.022,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.985:0.213,0.59,0.198	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.178:0.824,0.174,0.002	0|0:0.137:0.868,0.127,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.167:0.841,0.151,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.296:0.724,0.255,0.02	1|1:2:0,0,1	0|0:0.025:0.975,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.829:0.383,0.405,0.212	1|0:0.534:0.536,0.394,0.07	1|1:1.21:0.154,0.483,0.364	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.934,0.061,0.004	0|0:0:1,0,0	0|1:1.231:0.154,0.46,0.385	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.128:0.875,0.121,0.004	0|0:0.163:0.849,0.14,0.011	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.288:0.735,0.242,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.184:0.161,0.493,0.346	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.142:0.864,0.13,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.995:0.284,0.438,0.278	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.014:0.987,0.013,0	1|1:2:0,0,1	0|0:0.012:0.989,0.011,0	1|1:1.332:0.128,0.413,0.46	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.961:0.002,0.036,0.963	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.675:0.032,0.261,0.707	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.127:0.874,0.124,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0
+3	16713722	SNP-3.16712367.	A	G	.	PASS	AR2=0.977;DR2=0.982;AF=0.203	GT:DS:GP	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:0.639:0.434,0.493,0.073	0|0:0.219:0.786,0.208,0.006	0|0:0.197:0.808,0.188,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.49:0.57,0.371,0.06	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.939,0.06,0.001	0|0:0.065:0.936,0.062,0.001	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0.046:0.954,0.045,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.103:0.898,0.101,0.001	0|0:0.068:0.934,0.065,0.001	0|0:0.127:0.875,0.123,0.002	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.017:0.983,0.017,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.233:0.791,0.185,0.024	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0.094:0.908,0.091,0.002	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.048:0.952,0.047,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.331:0.681,0.306,0.013	1|1:1.937:0,0.063,0.937	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.049:0.952,0.047,0.001	0|0:0:1,0,0	0|0:0.069:0.932,0.067,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0.618:0.451,0.479,0.07	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16713855	SNP-3.16712500.	C	A	.	PASS	AR2=0.997;DR2=0.998;AF=0.472	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.028,0.972	0|0:0:1,0,0	0|0:0.26:0.747,0.246,0.007	0|0:0:1,0,0	0|0:0.122:0.88,0.117,0.002	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.95:0.001,0.047,0.952	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.975:0,0.024,0.976	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.1:0.9,0.099,0.001	0|0:0:1,0,0	1|1:1.976:0,0.024,0.976	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.969,0.031,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16713877	SNP-3.16712522.	A	G	.	PASS	AR2=0.98;DR2=0.985;AF=0.34	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.953:0,0.046,0.953	1|1:1.577:0.017,0.389,0.594	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.114:0.894,0.098,0.008	1|1:1.693:0.01,0.288,0.703	1|0:1.358:0.101,0.439,0.459	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.927:0.001,0.07,0.928	1|1:2:0,0,1	1|1:1.917:0.002,0.079,0.919	0|0:0:1,0,0	1|1:1.845:0.012,0.13,0.857	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.936:0.001,0.062,0.937	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.889:0.001,0.109,0.89	1|1:1.919:0.002,0.077,0.921	1|1:1.749:0.012,0.226,0.761	1|1:1.915:0.002,0.082,0.917	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.788:0.213,0.785,0.001	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.996,0.004,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.985,0.015,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.996,0.004,0	1|1:1.988:0,0.011,0.989	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.238:0.762,0.238,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.581:0.056,0.307,0.637	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.879:0.002,0.117,0.881	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.034:0.967,0.032,0.001	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.634:0.031,0.305,0.665	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.949:0.001,0.05,0.95	1|1:1.939:0.001,0.059,0.94	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0
+3	16717631	SNP-3.16716276.	C	A	.	PASS	AR2=0.995;DR2=0.995;AF=0.356	GT:DS:GP	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:1.953:0.001,0.045,0.954	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0.184:0.825,0.166,0.009	1|1:2:0,0,1	0|0:0.12:0.885,0.111,0.004	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.263:0.738,0.261,0.001	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.079:0.924,0.073,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.092:0.909,0.091,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.058:0.943,0.057,0	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.983:0,0.017,0.983	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.203:0.797,0.203,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16718155	SNP-3.16716800.	A	G	.	PASS	AR2=0.98;DR2=0.984;AF=0.281	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.05:0.95,0.049,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.957,0.042,0	0|0:0.242:0.764,0.23,0.006	0|0:0.083:0.92,0.078,0.002	1|0:0.531:0.483,0.503,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.285:0.752,0.212,0.037	0|0:0.042:0.958,0.041,0.001	0|0:0.091:0.913,0.084,0.003	0|0:0:1,0,0	0|0:0.171:0.837,0.155,0.008	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.034:0.966,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.946,0.053,0.001	0|0:0.108:0.894,0.104,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.946:0.001,0.052,0.947	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.966:0,0.033,0.966	0|0:0.258:0.764,0.215,0.022	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.956:0.001,0.042,0.957	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.078:0.924,0.075,0.002	0|0:0.064:0.938,0.06,0.002	0|0:0.079:0.923,0.076,0.002	0|1:1:0,1,0	0|0:0.081:0.92,0.078,0.001	0|0:0.025:0.975,0.025,0	0|0:0.044:0.957,0.041,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.95,0.05,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.945,0.054,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.363:0.021,0.596,0.383	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.985:0,0.015,0.985	0|0:0:1,0,0	0|0:0.128:0.876,0.121,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.945,0.054,0.001	0|0:0.07:0.931,0.067,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.933,0.064,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.963,0.036,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.101:0.902,0.095,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.047:0.954,0.045,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.959,0.041,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.956,0.044,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.967,0.033,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.97,0.029,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16719368	SNP-3.16718013.	C	A	.	PASS	AR2=1;DR2=1;AF=0.463	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16724730	SNP-3.16723375.	A	G	.	PASS	AR2=0.906;DR2=0.91;AF=0.423	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.918:0.292,0.497,0.21	1|0:1.01:0.24,0.511,0.25	0|0:0.868:0.319,0.494,0.187	0|1:1.027:0.213,0.548,0.24	0|1:0.925:0.287,0.501,0.212	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|1:0.863:0.321,0.494,0.185	1|0:0.844:0.336,0.485,0.18	0|0:0.815:0.352,0.481,0.167	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|1:0.803:0.359,0.478,0.163	0|0:0:1,0,0	0|1:0.857:0.329,0.485,0.186	1|0:0.853:0.33,0.487,0.183	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.859:0.327,0.486,0.186	0|1:0.865:0.321,0.492,0.187	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:1.9:0.003,0.093,0.903	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.046:0.219,0.516,0.265	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0.883:0.352,0.413,0.235	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.579:0.013,0.395,0.592	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.124:0.876,0.124,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.127:0.23,0.413,0.357	0|0:0:1,0,0	0|0:0.804:0.359,0.478,0.163	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|1:0.903:0.309,0.479,0.212	0|0:0.87:0.322,0.486,0.192	1|0:0.804:0.359,0.478,0.163	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.803:0.359,0.478,0.163	0|0:0.001:0.999,0.001,0	0|1:0.88:0.316,0.488,0.196	0|1:0.805:0.358,0.478,0.163	1|0:0.891:0.306,0.498,0.196	1|0:0.97:0.257,0.517,0.226	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:1.969:0,0.031,0.969	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:0.875:0.315,0.495,0.19	1|1:2:0,0,1	1|0:0.966:0.263,0.508,0.229	1|0:0.819:0.349,0.482,0.169	0|0:0.866:0.32,0.495,0.186	0|1:0.927:0.289,0.494,0.216	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.824:0.028,0.121,0.852	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.853:0.329,0.489,0.182	0|0:0:1,0,0	1|0:0.863:0.322,0.492,0.186	0|1:0.817:0.351,0.481,0.168	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.816:0.351,0.481,0.168	1|0:0.853:0.328,0.491,0.181	0|0:0.816:0.351,0.481,0.167	1|0:0.802:0.36,0.478,0.162	0|0:0.804:0.359,0.478,0.163	0|0:0.804:0.359,0.478,0.163	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:0.804:0.359,0.478,0.163	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16726214	SNP-3.16724859.	A	G	.	PASS	AR2=0.846;DR2=0.89;AF=0.244	GT:DS:GP	0|0:0.4:0.653,0.293,0.053	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.227:0.795,0.184,0.022	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.072:0.179,0.569,0.251	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.58:0.503,0.414,0.083	1|1:1.019:0.396,0.19,0.414	0|0:0.453:0.599,0.349,0.052	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.323:0.711,0.254,0.035	1|1:2:0,0,1	1|0:0.504:0.559,0.377,0.064	0|0:0.427:0.62,0.334,0.046	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.521:0.549,0.382,0.07	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.967:0.251,0.531,0.218	1|0:1.223:0.089,0.6,0.312	0|0:0.464:0.591,0.354,0.055	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.241:0.778,0.203,0.019	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.332:0.696,0.276,0.028	0|1:0.884:0.306,0.505,0.189	0|0:0.114:0.89,0.106,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0.171,0.659,0.171	0|0:0:1,0,0	0|0:0.302:0.721,0.256,0.023	1|1:2:0,0,1	0|0:0.358:0.674,0.295,0.032	1|1:2:0,0,1	1|1:1.599:0.047,0.306,0.647	0|0:0.056:0.945,0.054,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.416:0.048,0.487,0.464	0|0:0:1,0,0	0|0:0.31:0.719,0.252,0.029	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.351:0.68,0.288,0.031	0|0:0:1,0,0	0|0:0.295:0.727,0.251,0.022	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.367:0.663,0.306,0.03	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.319:0.134,0.413,0.453	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.322:0.704,0.27,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.644:0.394,0.567,0.038	0|0:0:1,0,0	0|0:0.31:0.758,0.173,0.068	0|0:0:1,0,0	0|0:0.102:0.899,0.1,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.389:0.646,0.32,0.034	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.429:0.616,0.339,0.045	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.254:0.166,0.414,0.42	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.049:0.952,0.047,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0.229:0.802,0.167,0.031	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.29:0.731,0.248,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.037:0.963,0.037,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.4:0.65,0.3,0.05	0|0:0.435:0.607,0.351,0.042	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.267:0.76,0.214,0.027	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.483:0.57,0.377,0.053	0|0:0.021:0.98,0.02,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.815:0.01,0.164,0.825	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.764:0.337,0.563,0.101	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.605:0.031,0.334,0.636	1|0:0.637:0.451,0.461,0.088	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.279:0.747,0.226,0.027	0|0:0.522:0.534,0.41,0.056	0|0:0.324:0.702,0.272,0.026	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.243:0.771,0.215,0.014	0|0:0:1,0,0	0|0:0.124:0.887,0.102,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.157:0.858,0.128,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.571:0.512,0.406,0.083	0|1:0.644:0.461,0.434,0.105	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0.452:0.6,0.347,0.053	0|1:1.067:0.149,0.634,0.216	0|0:0.533:0.538,0.391,0.071	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.145:0.865,0.124,0.011	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.29:0.731,0.248,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.986:0,0.013,0.986	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.294:0.728,0.251,0.022
+3	16726980	SNP-3.16725625.	A	G	.	PASS	AR2=0.988;DR2=0.989;AF=0.226	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.125:0.879,0.117,0.004	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.254:0.748,0.25,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0.166:0.839,0.156,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.076:0.926,0.071,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.112:0.892,0.105,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.027,0.972	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.764:0.002,0.232,0.766	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.072:0.933,0.062,0.005	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.124:0.88,0.116,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.145:0.861,0.133,0.006	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.086:0.916,0.082,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.956:0.001,0.043,0.957	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.214:0.794,0.199,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.192:0.814,0.18,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16733773	SNP-3.16732418.	A	G	.	PASS	AR2=0.991;DR2=0.993;AF=0.523	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.846:0.002,0.15,0.848	1|1:1.957:0,0.042,0.957	1|1:1.975:0,0.025,0.975	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.885:0.007,0.101,0.892	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:1.959:0,0.04,0.959	0|1:1.605:0.001,0.393,0.606	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.979:0,0.021,0.979	1|1:1.935:0.001,0.063,0.936	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.953:0.001,0.046,0.954	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.915:0.001,0.082,0.916	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.935:0.001,0.063,0.936	1|1:1.947:0.001,0.052,0.948	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.939:0.001,0.059,0.94	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.848:0.007,0.138,0.855	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.868:0,0.132,0.868	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.734:0.001,0.264,0.735	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.977:0,0.022,0.978	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.871:0.008,0.113,0.879	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.916:0.001,0.082,0.917	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.935:0.001,0.063,0.936	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16736480	SNP-3.16735125.	A	G	.	PASS	AR2=0.972;DR2=0.981;AF=0.462	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1.144:0.179,0.498,0.323	1|1:2:0,0,1	0|1:1.33:0.127,0.416,0.457	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.619:0.029,0.324,0.647	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.564:0.049,0.337,0.614	1|1:1.949:0.001,0.05,0.95	1|0:1:0,1,0	0|0:0.154:0.846,0.154,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.959:0.001,0.039,0.96	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.822:0.008,0.162,0.83	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.222:0.219,0.341,0.44	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.82:0.008,0.164,0.828	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.8:0.01,0.18,0.81	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.942,0.058,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.82:0.008,0.164,0.828	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.964:0.002,0.033,0.966	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.615:0.03,0.325,0.645	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.814:0.009,0.169,0.822	0|0:0.312:0.757,0.174,0.069	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.559:0.028,0.385,0.587	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16737323	SNP-3.16735968.	A	G	.	PASS	AR2=1;DR2=1;AF=0.418	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16738150	SNP-3.16736795.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.439	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.864:0.006,0.125,0.87	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.902:0.003,0.093,0.904	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.929:0.071,0.929,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.282:0.043,0.632,0.325	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.924:0.002,0.072,0.926	1|0:0.968:0.064,0.905,0.032	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.959:0.001,0.039,0.96	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	16738536	SNP-3.16737181.	A	G	.	PASS	AR2=0.997;DR2=0.997;AF=0.407	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.974:0,0.025,0.974	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.874:0.005,0.117,0.879	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.98:0,0.019,0.98	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.974:0,0.025,0.975	0|1:1:0,1,0	1|1:1.861:0.003,0.132,0.864	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.931:0.001,0.066,0.932	1|1:1.845:0.006,0.143,0.851	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.896:0.005,0.093,0.901	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16739478	SNP-3.16738123.	C	A	.	PASS	AR2=0.985;DR2=0.988;AF=0.428	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.726:0.018,0.237,0.745	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.789:0.003,0.205,0.792	0|0:0:1,0,0	1|1:1.854:0.006,0.135,0.86	1|1:2:0,0,1	0|0:0.054:0.947,0.053,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.953,0.047,0.001	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.874:0.004,0.117,0.879	0|0:0.074:0.926,0.073,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.748:0.017,0.218,0.765	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.12:0.88,0.12,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.992:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.201:0.809,0.181,0.01	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.887:0.003,0.108,0.89	1|1:2:0,0,1	1|1:1.94:0,0.059,0.94	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.967,0.032,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.602:0.084,0.23,0.686	0|0:0:1,0,0	1|1:1.952:0.002,0.044,0.954	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.498:0.057,0.388,0.555	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|1:1.66:0.045,0.251,0.705	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.902:0.005,0.087,0.908	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.867:0.006,0.121,0.873	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16740928	SNP-3.16739573.	A	G	.	PASS	AR2=0.941;DR2=0.952;AF=0.281	GT:DS:GP	0|0:0.334:0.704,0.258,0.038	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.042:0.959,0.04,0.001	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.45:0.589,0.373,0.039	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.611:0.509,0.37,0.121	1|1:1.789:0.009,0.193,0.798	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.768:0.368,0.495,0.137	1|1:1.822:0.006,0.166,0.828	1|1:2:0,0,1	1|1:1.715:0.021,0.243,0.736	1|1:2:0,0,1	1|1:1.83:0.008,0.155,0.838	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.865:0.005,0.124,0.87	1|1:2:0,0,1	1|1:1.576:0.014,0.396,0.59	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.29:0.72,0.269,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.151:0.856,0.137,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.173:0.834,0.159,0.007	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.936,0.063,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.884:0.318,0.48,0.202	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:0.825:0.334,0.508,0.159	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.034,0	1|1:1.491:0.06,0.388,0.552	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.255:0.76,0.226,0.015	0|0:0:1,0,0	0|0:0.119:0.886,0.11,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.096:0.907,0.09,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:0.919:0.353,0.376,0.271	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.444:0.644,0.268,0.088	0|0:0:1,0,0	0|0:0.031:0.97,0.03,0.001	1|1:1.941:0.001,0.056,0.942	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.978:0.001,0.021,0.978	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.768:0.017,0.198,0.785	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.774:0.362,0.503,0.135	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.828:0.323,0.527,0.151	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.131:0.871,0.126,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.82:0.01,0.16,0.83	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.854:0.015,0.116,0.869	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.086:0.915,0.083,0.002	0|0:0:1,0,0	0|0:0.18:0.828,0.164,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.943:0.001,0.054,0.945	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.934:0.002,0.063,0.936	1|1:2:0,0,1	1|1:1.912:0.003,0.081,0.916	1|1:1.947:0.001,0.05,0.948	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.385:0.661,0.293,0.046	0|0:0.286:0.742,0.229,0.028	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.167:0.842,0.149,0.009	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16741152	SNP-3.16739797.	A	G	.	PASS	AR2=0.961;DR2=0.972;AF=0.475	GT:DS:GP	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.844:0.24,0.675,0.085	0|0:0:1,0,0	0|1:1.33:0.133,0.405,0.463	0|0:0:1,0,0	0|0:0.031:0.97,0.03,0.001	1|1:1.739:0.017,0.227,0.756	1|0:1.344:0.054,0.549,0.397	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.415:0.094,0.397,0.509	0|0:0.004:0.996,0.004,0	0|0:0.017:0.983,0.016,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.927:0.001,0.072,0.927	1|1:1.974:0,0.025,0.974	1|1:1.633:0.02,0.327,0.653	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.578:0.561,0.301,0.138	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.95:0,0.05,0.95	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0,0.025,0.975	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.908:0.003,0.085,0.912	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.903:0.002,0.093,0.905	1|1:2:0,0,1	1|0:1.022:0.102,0.775,0.124	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:0.998:0.256,0.491,0.253	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.957,0.043,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.375:0.657,0.31,0.032	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.326:0.131,0.412,0.457	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.837:0.303,0.557,0.14	0|0:0.171:0.833,0.162,0.004	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.039:0.962,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:1.658:0.024,0.294,0.682	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.308:0.696,0.301,0.003	1|1:2:0,0,1	0|0:0.026:0.975,0.025,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.96:0.001,0.039,0.96	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.026:0.975,0.025,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.155:0.845,0.154,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.802:0.012,0.175,0.813	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.515:0.561,0.362,0.076	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.383:0.722,0.173,0.105	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16741191	SNP-3.16739836.	A	G	.	PASS	AR2=0.94;DR2=0.956;AF=0.366	GT:DS:GP	0|0:0.372:0.666,0.295,0.039	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.592:0.454,0.5,0.046	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.391:0.004,0.601,0.395	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.445:0.002,0.551,0.447	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.23:0.783,0.204,0.013	0|0:0:1,0,0	0|0:0.323:0.702,0.273,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.229:0.784,0.202,0.013	0|0:0.283:0.746,0.225,0.029	0|0:0:1,0,0	0|0:0.26:0.756,0.227,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.192:0.107,0.593,0.299	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.133:0.168,0.532,0.3	0|0:0.335:0.707,0.251,0.042	0|0:0:1,0,0	0|0:0.108:0.898,0.097,0.006	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.856:0.261,0.621,0.117	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.452:0.596,0.356,0.048	0|0:0.606:0.451,0.492,0.057	0|0:0:1,0,0	1|1:1.606:0.02,0.353,0.626	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.072:0.932,0.063,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.424:0.625,0.326,0.049	0|1:0.786:0.359,0.497,0.144	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.913:0.269,0.549,0.182	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.081:0.214,0.491,0.295	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.243:0.772,0.214,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.447:0.589,0.375,0.036	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.945:0.001,0.053,0.946	0|0:0.66:0.457,0.426,0.117	1|1:2:0,0,1	0|1:1.498:0.001,0.5,0.499	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.614:0.487,0.413,0.1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.255:0.762,0.222,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.242:0.773,0.212,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.557:0.072,0.299,0.629	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.451:0.608,0.333,0.059	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.648:0.034,0.284,0.682	1|1:2:0,0,1	0|0:0:1,0,0
+3	16742631	SNP-3.16741276.	A	G	.	PASS	AR2=0.951;DR2=0.96;AF=0.39	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.595:0.44,0.524,0.035	0|1:1:0,1,0	0|0:0.057:0.944,0.054,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.126:0.2,0.474,0.326	0|0:0:1,0,0	0|0:0.02:0.981,0.019,0	1|1:1.998:0,0.002,0.998	0|1:1.03:0.227,0.516,0.257	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.833:0.347,0.473,0.18	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.977:0,0.023,0.977	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.639:0.029,0.303,0.668	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.534:0.049,0.369,0.583	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.898:0.003,0.096,0.901	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.9:0.003,0.094,0.903	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.966:0,0.033,0.966	0|1:1.169:0.116,0.6,0.285	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.754:0.003,0.24,0.757	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.819:0.214,0.752,0.034	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.355:0.645,0.354,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.368:0.1,0.432,0.468	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1.079:0.194,0.532,0.274	1|0:0.819:0.357,0.467,0.176	1|1:1.966:0.001,0.031,0.968	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.932,0.067,0.001	0|0:0:1,0,0	0|1:0.831:0.348,0.473,0.179	0|0:0:1,0,0	1|1:1.151:0.176,0.496,0.328	1|1:2:0,0,1	0|1:0.991:0.246,0.517,0.237	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.162:0.852,0.134,0.014	0|0:0.099:0.907,0.086,0.006	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.073:0.93,0.068,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.11:0.896,0.097,0.006	0|0:0.155:0.861,0.122,0.016	1|1:1.309:0.117,0.458,0.425	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.213:0.812,0.164,0.025	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.343:0.163,0.33,0.506	0|0:0:1,0,0	1|1:2:0,0,1
+3	16745344	SNP-3.16743989.	A	G	.	PASS	AR2=0.988;DR2=0.991;AF=0.334	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.235:0.777,0.211,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.156:0.846,0.152,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.971:0,0.028,0.971	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.938:0.001,0.06,0.939	0|1:1:0,1,0	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|0:1.573:0.062,0.302,0.636	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.978:0,0.021,0.979	1|1:1.58:0.027,0.365,0.608	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.251:0.749,0.251,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.932:0,0.067,0.932	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.88:0.004,0.112,0.884	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.878:0.004,0.114,0.882	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.319:0.709,0.264,0.028	0|0:0:1,0,0	1|1:2:0,0,1
+3	16746102	SNP-3.16744747.	A	G	.	PASS	AR2=0.981;DR2=0.984;AF=0.377	GT:DS:GP	0|0:0.125:0.879,0.116,0.005	0|0:0:1,0,0	0|0:0.093:0.911,0.085,0.004	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.917:0,0.082,0.918	1|1:1.959:0,0.041,0.959	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	0|0:0.148:0.867,0.117,0.015	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.038:0.963,0.037,0.001	0|0:0:1,0,0	0|0:0.068:0.932,0.068,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.945,0.055,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.081:0.919,0.08,0.001	0|0:0.051:0.95,0.05,0.001	0|0:0:1,0,0	0|0:0.049:0.952,0.048,0.001	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.957,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0.039:0.961,0.038,0.001	0|0:0.05:0.95,0.049,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.11:0.894,0.102,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.932,0.066,0.002	0|0:0:1,0,0	0|0:0.104:0.899,0.098,0.003	0|0:0.08:0.922,0.076,0.002	0|0:0.078:0.924,0.075,0.001	0|0:0.071:0.93,0.068,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.116:0.887,0.11,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.118:0.882,0.118,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.038:0.962,0.037,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.1:0.903,0.094,0.003	0|0:0:1,0,0	0|0:0.092:0.91,0.088,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.954,0.045,0.001	0|0:0.032:0.968,0.032,0	0|0:0:1,0,0	0|0:0.056:0.947,0.05,0.003	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.217:0.792,0.198,0.01	0|0:0.129:0.877,0.117,0.006	0|0:0.175:0.836,0.153,0.011	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.166:0.843,0.147,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.04:0.961,0.039,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.079:0.924,0.072,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.118:0.885,0.112,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.489:0.533,0.446,0.021	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.062:0.939,0.061,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.085:0.916,0.084,0.001	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.932,0.067,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.082:0.919,0.08,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.971,0.028,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.109:0.906,0.079,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.142:0.859,0.139,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16747632	SNP-3.16746277.	A	G	.	PASS	AR2=0.969;DR2=0.976;AF=0.257	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.081:0.92,0.078,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.369:0.672,0.287,0.041	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.324:0.7,0.276,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.101:0.902,0.095,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.179:0.832,0.156,0.012	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.67:0.453,0.424,0.123	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.734:0.299,0.669,0.032	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.965,0.035,0.001	0|0:0:1,0,0	0|0:0.334:0.695,0.276,0.029	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.222:0.789,0.199,0.012	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0.074:0.926,0.073,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.229:0.785,0.2,0.014	0|0:0.047:0.954,0.045,0.001	1|1:2:0,0,1	0|0:0.099:0.904,0.093,0.003	0|1:1:0,1,0	0|0:0.154:0.853,0.14,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.021,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.093:0.91,0.088,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.261:0.753,0.234,0.014	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.148:0.858,0.136,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.239:0.779,0.202,0.019	0|0:0.172:0.836,0.157,0.008	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.946,0.053,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.088:0.918,0.076,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.187:0.822,0.169,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16749510	SNP-3.16748155.	C	A	.	PASS	AR2=1;DR2=1;AF=0.451	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.971:0,0.028,0.972	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.971:0,0.028,0.972	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16749956	SNP-3.16748601.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.46	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.922,0.076,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.012:0.988,0.012,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.03:0.971,0.029,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.973,0.027,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.067:0.935,0.064,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.042:0.959,0.04,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16753383	SNP-3.16752028.	C	A	.	PASS	AR2=1;DR2=1;AF=0.457	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16754512	SNP-3.16753157.	A	G	.	PASS	AR2=0.995;DR2=0.996;AF=0.341	GT:DS:GP	0|0:0:1,0,0	0|0:0.031:0.97,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.865:0.004,0.127,0.869	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.34:0.672,0.317,0.012	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.95:0.079,0.891,0.029	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.065:0.936,0.062,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.965,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.959,0.04,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.875:0.004,0.118,0.879	1|1:2:0,0,1	0|0:0.06:0.942,0.057,0.002	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.032:0.968,0.031,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.087:0.916,0.081,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16757648	SNP-3.16756293.	A	G	.	PASS	AR2=0.969;DR2=0.975;AF=0.237	GT:DS:GP	0|0:0.199:0.812,0.177,0.011	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.067:0.934,0.066,0	0|0:0:1,0,0	0|0:0.147:0.862,0.13,0.008	0|0:0.034:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.212:0.8,0.187,0.013	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.436:0.611,0.341,0.048	0|0:0:1,0,0	0|0:0.208:0.805,0.183,0.012	0|0:0.108:0.896,0.101,0.003	0|0:0.165:0.841,0.153,0.006	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.177:0.832,0.159,0.009	0|0:0.184:0.825,0.166,0.009	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.05:0.95,0.05,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.168:0.835,0.162,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.212:0.797,0.194,0.009	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.334:0.683,0.3,0.017	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.948,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.939,0.06,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.03:0.971,0.029,0.001	0|0:0:1,0,0	0|0:0.043:0.958,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.06:0.94,0.059,0.001	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.038:0.963,0.037,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0.08:0.922,0.076,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.322:0.69,0.299,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.15:0.856,0.139,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.257:0.765,0.213,0.022	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.015:0.986,0.014,0	0|0:0:1,0,0	0|0:0.18:0.823,0.173,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.961,0.038,0.001	0|0:0.116:0.887,0.109,0.004	0|0:0.102:0.901,0.096,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.123:0.882,0.113,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.238:0.773,0.215,0.012	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16760451	SNP-3.16759096.	A	G	.	PASS	AR2=0.947;DR2=0.965;AF=0.238	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.195:0.17,0.466,0.364	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.402:0.649,0.3,0.051	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.072:0.93,0.068,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.34:0.66,0.34,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.032,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.522:0.553,0.372,0.075	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.534:0.563,0.341,0.096	1|0:1:0,1,0	0|0:0.647:0.467,0.418,0.115	0|1:0.63:0.485,0.401,0.114	0|1:0.672:0.452,0.425,0.124	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.508:0.01,0.473,0.518	0|1:1:0,1,0	1|1:1.912:0.007,0.074,0.919	0|0:0:1,0,0	0|0:0.721:0.456,0.367,0.177	1|0:0.85:0.258,0.635,0.107	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.831:0.33,0.51,0.16	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.045:0.17,0.615,0.215	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.2:0.84,0.119,0.04	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.108:0.895,0.103,0.002	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.958:0,0.041,0.958	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16763096	SNP-3.16761741.	A	G	.	PASS	AR2=0.955;DR2=0.966;AF=0.505	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.943:0.001,0.055,0.944	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.712:0.022,0.244,0.734	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.687:0.024,0.264,0.711	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	1|1:1.698:0.023,0.255,0.721	1|1:2:0,0,1	1|1:1.649:0.031,0.289,0.68	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1.659:0.029,0.283,0.688	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.682:0.026,0.265,0.708	1|1:2:0,0,1	1|1:1.689:0.025,0.262,0.714	1|1:1.705:0.023,0.25,0.728	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.965:0.001,0.034,0.965	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.963:0.042,0.953,0.005	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.966:0,0.033,0.967	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.865:0.136,0.863,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.045:0.955,0.045,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.652:0.03,0.287,0.683	1|1:2:0,0,1	0|0:0.754:0.393,0.46,0.147	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.702:0.439,0.42,0.141	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.69:0.024,0.262,0.714	1|1:1.669:0.027,0.277,0.696	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.981:0,0.019,0.981	0|0:0:1,0,0	1|1:1.694:0.025,0.257,0.719	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.674:0.027,0.273,0.701	1|1:2:0,0,1	1|1:1.683:0.025,0.267,0.708	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.65:0.031,0.288,0.681	1|1:1.669:0.028,0.275,0.697	1|1:2:0,0,1	1|1:1.653:0.03,0.286,0.683	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.659:0.029,0.283,0.688	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.665:0.029,0.277,0.694	0|1:1.652:0.03,0.287,0.683	1|1:1.65:0.031,0.288,0.681	0|1:1.54:0.045,0.37,0.585	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.967:0,0.032,0.968	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.634:0.034,0.298,0.668	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16766719	SNP-3.16765364.	A	G	.	PASS	AR2=0.99;DR2=0.991;AF=0.299	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.1:0.903,0.094,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.103:0.901,0.096,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.11:0.894,0.103,0.003	0|0:0.129:0.875,0.12,0.004	0|1:1:0,1,0	0|0:0.06:0.941,0.058,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.124:0.879,0.117,0.004	0|0:0.123:0.88,0.116,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.138:0.867,0.128,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.129:0.875,0.121,0.004	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.318:0.773,0.137,0.091	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.091:0.911,0.087,0.002	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.081:0.921,0.076,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.033:0.968,0.031,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.953,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.112:0.891,0.106,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.11:0.893,0.104,0.003	1|1:2:0,0,1
+3	16775485	SNP-3.16774358.	A	G	.	PASS	AR2=1;DR2=1;AF=0.286	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16777112	SNP-3.16775985.	A	G	.	PASS	AR2=0.948;DR2=0.963;AF=0.37	GT:DS:GP	0|0:0.542:0.496,0.466,0.038	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.196:0.814,0.176,0.01	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.334:0.69,0.285,0.025	0|0:0.38:0.658,0.304,0.038	0|0:0.079:0.923,0.075,0.002	0|0:0.501:0.538,0.423,0.039	1|0:1:0,1,0	0|0:0.39:0.675,0.261,0.065	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.262:0.758,0.221,0.02	0|0:0:1,0,0	0|0:0.105:0.898,0.1,0.003	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.131:0.878,0.112,0.01	0|0:0:1,0,0	0|0:0.117:0.887,0.109,0.004	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.961:0.001,0.038,0.961	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.612:0.481,0.425,0.093	0|0:0.448:0.595,0.363,0.042	0|1:1:0,1,0	0|1:0.915:0.208,0.669,0.123	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.476:0.573,0.378,0.049	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:0.437:0.602,0.358,0.039	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.108:0.896,0.1,0.004	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|1:0.966:0.183,0.668,0.149	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.281:0.737,0.246,0.017	0|0:0:1,0,0	0|0:0.064:0.936,0.064,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.691:0.447,0.414,0.139	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.079:0.923,0.075,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.474:0.589,0.348,0.063	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.386:0.652,0.311,0.038	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.313:0.718,0.251,0.031	0|0:0.271:0.744,0.242,0.014	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.252:0.768,0.212,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.111:0.892,0.105,0.003	0|1:1:0,1,0	0|0:0.147:0.863,0.127,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.276:0.743,0.238,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16777397	SNP-3.16776270.	A	G	.	PASS	AR2=1;DR2=1;AF=0.292	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16777506	SNP-3.16776379.	A	G	.	PASS	AR2=1;DR2=1;AF=0.276	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16777607	SNP-3.16776480.	C	A	.	PASS	AR2=0.987;DR2=0.991;AF=0.432	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0,0.032,0.968	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.515:0.535,0.416,0.05	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.89:0.119,0.872,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0.324:0.683,0.31,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.469:0.577,0.378,0.045	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:1.992:0,0.008,0.992	1|1:1.893:0.003,0.1,0.896	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.95:0.001,0.049,0.95	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.967:0,0.032,0.967	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.935:0.065,0.935,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.968:0,0.031,0.969	1|1:2:0,0,1	1|1:1.952:0,0.047,0.953	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.852:0.001,0.147,0.852	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.133:0.879,0.109,0.012	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.314:0.741,0.204,0.055	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.98,0.02,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.976:0,0.023,0.976	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.128:0.875,0.122,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.961:0,0.038,0.962	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16779274	SNP-3.16778147.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.29	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.028:0.972,0.028,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.961,0.039,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16779316	SNP-3.16778189.	A	G	.	PASS	AR2=0.986;DR2=0.99;AF=0.231	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.819:0.014,0.154,0.832	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.396:0.056,0.491,0.452	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.532:0.052,0.363,0.584	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.684:0.025,0.266,0.709	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.814:0.011,0.165,0.824	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.553:0.046,0.356,0.598	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16779367	SNP-3.16778240.	A	G	.	PASS	AR2=0.98;DR2=0.982;AF=0.296	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.977:0,0.022,0.978	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.948,0.051,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.128:0.875,0.121,0.004	0|0:0:1,0,0	0|0:0.075:0.927,0.072,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.05:0.95,0.049,0	0|0:0.101:0.902,0.095,0.003	0|0:0.069:0.933,0.066,0.002	0|0:0.092:0.91,0.088,0.002	0|0:0.086:0.916,0.082,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.14:0.863,0.133,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.967:0,0.032,0.968	1|1:2:0,0,1	1|1:1.977:0,0.023,0.977	1|1:1.965:0,0.034,0.966	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.977:0,0.023,0.977	1|1:1.961:0,0.038,0.961	1|1:2:0,0,1	0|1:1.119:0.015,0.851,0.134	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.099:0.902,0.097,0.001	1|1:1.962:0,0.037,0.962	1|1:2:0,0,1	1|1:1.962:0,0.037,0.962	1|1:2:0,0,1	1|1:1.967:0,0.033,0.967	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.065:0.935,0.064,0	1|1:1.962:0,0.037,0.962	1|1:1.942:0.001,0.056,0.943	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.951:0.001,0.048,0.951	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.13:0.873,0.124,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.122:0.881,0.117,0.002	0|0:0.271:0.74,0.25,0.011	0|0:0.092:0.91,0.088,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.264:0.745,0.245,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.967:0,0.032,0.968	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.084:0.919,0.079,0.002	0|0:0.073:0.93,0.068,0.003	1|1:2:0,0,1	0|0:0.143:0.861,0.135,0.004	0|0:0.076:0.925,0.074,0.001	0|0:0.089:0.914,0.084,0.002	0|0:0.088:0.914,0.084,0.002	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.091:0.911,0.087,0.002	0|0:0.072:0.929,0.07,0.001	1|1:2:0,0,1	0|0:0.01:0.991,0.009,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.962:0,0.037,0.962	0|0:0.11:0.89,0.109,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.087:0.915,0.084,0.001	0|0:0.063:0.938,0.06,0.001	0|0:0.083:0.919,0.08,0.001	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.969,0.031,0	1|1:1.962:0,0.037,0.962	1|1:1.962:0,0.037,0.962	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.082:0.92,0.077,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.085:0.917,0.081,0.002	0|0:0.115:0.888,0.109,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.121:0.883,0.113,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16779761	SNP-3.16778634.	A	G	.	PASS	AR2=0.997;DR2=0.997;AF=0.295	GT:DS:GP	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.027:0.973,0.027,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.052:0.948,0.051,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	0|0:0.03:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.063:0.937,0.062,0	0|0:0.085:0.917,0.08,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.97,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.018:0.982,0.018,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0.019:0.981,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.078:0.925,0.072,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.971,0.029,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16779862	SNP-3.16778735.	C	A	.	PASS	AR2=1;DR2=1;AF=0.44	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.916:0.009,0.067,0.925	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16780004	SNP-3.16778877.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.275	GT:DS:GP	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.093:0.908,0.092,0.001	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.16:0.84,0.159,0.001	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.052:0.95,0.049,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16780112	SNP-3.16778985.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.272	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.877:0.007,0.109,0.884	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.956,0.043,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.959:0,0.04,0.959	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16780429	SNP-3.16779302.	A	G	.	PASS	AR2=1;DR2=1;AF=0.294	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16780471	SNP-3.16779344.	C	A	.	PASS	AR2=1;DR2=1;AF=0.43	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	16780558	SNP-3.16779431.	A	G	.	PASS	AR2=0.984;DR2=0.986;AF=0.293	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.688:0.345,0.622,0.033	0|0:0.113:0.89,0.107,0.003	0|1:0.792:0.221,0.766,0.013	1|1:2:0,0,1	0|0:0.095:0.906,0.093,0.001	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.062:0.938,0.061,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.137:0.869,0.126,0.005	0|0:0.031:0.975,0.018,0.007	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.082:0.92,0.079,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.954,0.046,0	0|0:0.175:0.836,0.154,0.01	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.06:0.942,0.055,0.002	0|0:0.06:0.942,0.055,0.002	0|0:0.101:0.9,0.099,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.067:0.935,0.063,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.05:0.95,0.049,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.944,0.056,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.187:0.823,0.167,0.01	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.042:0.959,0.041,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	1|0:0.77:0.245,0.74,0.015	0|0:0.144:0.86,0.135,0.005	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.123:0.881,0.116,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.096:0.906,0.092,0.002	0|0:0.018:0.983,0.017,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.156:0.845,0.154,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.06:0.942,0.055,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0.021:0.979,0.02,0	0|0:0.039:0.962,0.037,0.001	0|0:0:1,0,0	0|0:0.034:0.966,0.034,0	1|1:2:0,0,1
+3	16780639	SNP-3.16779512.	A	G	.	PASS	AR2=1;DR2=1;AF=0.28	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16780671	SNP-3.16779544.	C	A	.	PASS	AR2=1;DR2=1;AF=0.43	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.024:0.976,0.024,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16780741	SNP-3.16779614.	A	G	.	PASS	AR2=0.874;DR2=0.897;AF=0.375	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.728:0.406,0.461,0.134	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.679:0.437,0.447,0.116	0|0:0.672:0.441,0.446,0.113	1|0:0.704:0.419,0.457,0.124	0|0:0.71:0.416,0.459,0.125	1|0:1:0,1,0	0|0:0.696:0.425,0.454,0.121	0|1:0.715:0.413,0.46,0.128	0|0:0.694:0.426,0.454,0.12	1|0:0.718:0.413,0.457,0.131	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.748:0.393,0.465,0.141	0|1:0.71:0.415,0.459,0.126	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.672:0.441,0.446,0.113	0|0:0:1,0,0	0|0:0.695:0.431,0.443,0.126	1|1:2:0,0,1	0|0:0.669:0.443,0.445,0.112	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.678:0.437,0.448,0.115	0|0:0.672:0.441,0.446,0.113	0|1:1:0,1,0	0|0:0.684:0.433,0.449,0.117	0|1:0.672:0.441,0.446,0.113	1|0:0.672:0.441,0.446,0.113	1|0:0.674:0.44,0.446,0.114	1|1:2:0,0,1	0|0:0.672:0.441,0.446,0.113	0|0:0.713:0.414,0.46,0.127	0|1:0.667:0.445,0.444,0.111	0|1:0.811:0.36,0.468,0.171	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.684:0.433,0.449,0.117	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.678:0.437,0.448,0.115	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.71:0.415,0.459,0.126	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.672:0.441,0.446,0.113	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.658:0.036,0.269,0.695	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:0.672:0.441,0.446,0.113	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.676:0.438,0.447,0.115	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.678:0.437,0.448,0.115	0|0:0:1,0,0	0|0:0.672:0.441,0.446,0.113	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.991:0,0.009,0.991	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.661:0.448,0.442,0.11	0|0:0.673:0.44,0.446,0.114	0|0:0.712:0.414,0.459,0.126	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.669:0.443,0.444,0.112	0|1:0.676:0.438,0.447,0.115	0|1:0.695:0.431,0.443,0.126	0|0:0:1,0,0	0|0:0.695:0.431,0.443,0.126	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.672:0.441,0.446,0.113	0|0:0:1,0,0	0|0:0.695:0.431,0.443,0.126	0|1:1:0,1,0	0|1:0.671:0.442,0.445,0.113	0|0:0.672:0.441,0.446,0.113	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.762:0.384,0.47,0.146	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.673:0.441,0.446,0.113
+3	16780915	SNP-3.16779788.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.474	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.409:0.606,0.379,0.015	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.088:0.914,0.084,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.078:0.924,0.074,0.002	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.979,0.021,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.936,0.063,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.143:0.861,0.134,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16781002	SNP-3.16779875.	A	G	.	PASS	AR2=1;DR2=1;AF=0.259	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16781077	SNP-3.16779950.	A	G	.	PASS	AR2=0.996;DR2=0.996;AF=0.222	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.875:0.005,0.114,0.881	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.118:0.885,0.112,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.961,0.038,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.047:0.954,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.124:0.887,0.103,0.011	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.828:0.007,0.159,0.835	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16781257	SNP-3.16780130.	A	G	.	PASS	AR2=1;DR2=1;AF=0.274	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16781605	SNP-3.16780478.	A	G	.	PASS	AR2=1;DR2=1;AF=0.268	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16784936	SNP-3.16783809.	C	A	.	PASS	AR2=0.984;DR2=0.988;AF=0.443	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.074:0.927,0.071,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.037:0.963,0.037,0	0|0:0:1,0,0	0|0:0.056:0.944,0.056,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.102:0.9,0.097,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.084:0.917,0.081,0.001	0|0:0.097:0.907,0.088,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.12:0.882,0.117,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.077:0.925,0.074,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.534:0.035,0.396,0.569	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.822:0.008,0.162,0.83	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.959:0.001,0.039,0.96	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.137:0.863,0.136,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.073:0.929,0.07,0.001	1|1:2:0,0,1	1|1:1.833:0.009,0.15,0.842	1|0:1:0,1,0	1|1:1.845:0.001,0.154,0.846	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.932,0.066,0.001	0|0:0.074:0.928,0.07,0.002	0|1:0.565:0.455,0.525,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.942,0.057,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.098:0.905,0.093,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.15:0.858,0.134,0.008	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.053:0.948,0.051,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.946,0.053,0.001	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.082:0.92,0.078,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.388:0.67,0.273,0.057	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16789370	SNP-3.16788243.	C	A	.	PASS	AR2=0.99;DR2=0.991;AF=0.46	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.152:0.853,0.142,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.119:0.884,0.112,0.004	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.092:0.909,0.089,0.002	0|0:0.123:0.88,0.117,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.166:0.842,0.151,0.008	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.05:0.951,0.047,0.001	0|0:0.037:0.963,0.036,0.001	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.167:0.838,0.157,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.03:0.97,0.03,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.732:0.331,0.605,0.063	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.072:0.013,0.903,0.084	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.119:0.884,0.112,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.107:0.896,0.101,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.088:0.914,0.084,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.124:0.88,0.116,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.122:0.882,0.115,0.003	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.218:0.793,0.196,0.011	0|0:0.065:0.936,0.064,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0
+3	16791091	SNP-3.16789964.	C	A	.	PASS	AR2=0.974;DR2=0.982;AF=0.409	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.977:0,0.022,0.978	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.087:0.917,0.08,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.066:0.936,0.062,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.953,0.044,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.072:0.929,0.071,0.001	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.118:0.887,0.108,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.517:0.036,0.412,0.553	1|1:2:0,0,1	1|1:1.807:0.007,0.178,0.814	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.71:0.016,0.258,0.726	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.883:0.003,0.112,0.886	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:0.858:0.502,0.137,0.361	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.284:0.723,0.27,0.007	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.932,0.066,0.003	0|0:0.118:0.887,0.108,0.005	0|0:0:1,0,0	0|0:0.118:0.887,0.108,0.005	1|1:2:0,0,1	0|0:0.118:0.887,0.108,0.005	0|0:0:1,0,0	0|0:0.802:0.542,0.113,0.344	0|0:0.118:0.887,0.108,0.005	0|0:0.118:0.887,0.108,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.128:0.877,0.117,0.006	0|0:0:1,0,0	0|0:0.061:0.942,0.056,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.153:0.85,0.148,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16791407	SNP-3.16790280.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.442	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.173:0.827,0.173,0	0|0:0.032:0.968,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.148:0.853,0.145,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16793197	SNP-3.16792070.	A	G	.	PASS	AR2=0.918;DR2=0.939;AF=0.244	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.979,0.021,0	0|0:0.063:0.938,0.061,0.001	1|1:1.439:0.061,0.438,0.5	1|1:1.331:0.112,0.444,0.443	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.067:0.936,0.06,0.004	1|1:1.442:0.07,0.419,0.512	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.095:0.908,0.089,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.377:0.095,0.432,0.473	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.375:0.082,0.461,0.457	1|0:1.359:0.103,0.435,0.462	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.02:0.98,0.019,0	0|1:1.007:0.063,0.867,0.07	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.051:0.07,0.81,0.121	1|0:0.594:0.457,0.491,0.052	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.194:0.813,0.18,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.277:0.734,0.256,0.011	1|1:2:0,0,1	0|0:0.082:0.92,0.077,0.003	0|0:0:1,0,0	0|0:0.058:0.943,0.056,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.988:0.04,0.933,0.028	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.108:0.896,0.101,0.003	0|0:0.091:0.911,0.088,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.962,0.038,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.945,0.054,0.001	0|0:0.042:0.958,0.041,0.001	0|0:0:1,0,0	0|0:0.09:0.911,0.087,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.929:0.163,0.744,0.092	0|0:0:1,0,0	0|0:0.075:0.927,0.072,0.001	0|0:0:1,0,0	0|0:0.038:0.962,0.037,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.965,0.035,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.098:0.902,0.097,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.532:0.059,0.349,0.591	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.524:0.05,0.375,0.574	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.069:0.934,0.063,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.582:0.441,0.537,0.023	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.101:0.901,0.097,0.002	1|0:1.374:0.083,0.46,0.457	1|1:1.66:0.036,0.267,0.696	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.614:0.04,0.307,0.654	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.268:0.754,0.224,0.022	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.399:0.083,0.434,0.482	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.013:0.274,0.439,0.287	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.705:0.029,0.237,0.734	1|1:2:0,0,1	1|1:1.578:0.039,0.344,0.617	1|1:1.663:0.031,0.276,0.693	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	1|1:1.588:0.047,0.317,0.635	1|1:1.486:0.057,0.399,0.543	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.612:0.039,0.311,0.651	0|0:0:1,0,0	0|0:0.116:0.887,0.109,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.937,0.062,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.014,0	0|0:0.062:0.939,0.06,0.001	0|0:0:1,0,0	0|0:0.028:0.973,0.026,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.767:0.024,0.185,0.791	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16796885	SNP-3.16795758.	A	G	.	PASS	AR2=0.987;DR2=0.989;AF=0.258	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0.051:0.95,0.05,0	0|0:0.006:0.994,0.006,0	0|0:0.083:0.919,0.08,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.099:0.91,0.081,0.009	0|1:1.333:0.024,0.62,0.356	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.567:0.437,0.558,0.004	0|0:0.189:0.812,0.188,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.92:0.001,0.078,0.921	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.277:0.735,0.254,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.971:0.116,0.797,0.087	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.037:0.064,0.834,0.101	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.036:0.965,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.06:0.944,0.052,0.004	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.02:0.98,0.02,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.921:0.002,0.076,0.923	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.959,0.04,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.012:0.988,0.012,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16798362	SNP-3.16797235.	A	G	.	PASS	AR2=0.993;DR2=0.994;AF=0.285	GT:DS:GP	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.055:0.946,0.054,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.046:0.955,0.044,0.001	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.934:0.001,0.064,0.935	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.932,0.067,0.001	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.406:0.616,0.361,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.761:0.014,0.21,0.776	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.948,0.052,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.949,0.05,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.947:0.001,0.051,0.948	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.928:0.001,0.069,0.929	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.093:0.91,0.088,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16801060	SNP-3.16799933.	A	G	.	PASS	AR2=0.974;DR2=0.977;AF=0.301	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.936:0.002,0.061,0.937	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.092:0.91,0.089,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.018,0	0|0:0.315:0.791,0.104,0.105	0|0:0.088:0.914,0.085,0.001	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.98,0.02,0	0|0:0.064:0.937,0.062,0.001	0|0:0:1,0,0	0|0:0.057:0.943,0.056,0	1|1:1.851:0.007,0.134,0.858	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.847:0.005,0.143,0.852	0|1:1.07:0.055,0.82,0.125	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.916:0.003,0.078,0.919	1|1:2:0,0,1	1|1:1.931:0.002,0.066,0.932	1|1:2:0,0,1	1|1:1.887:0.004,0.105,0.891	0|1:0.938:0.064,0.934,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.79:0.008,0.193,0.798	1|1:1.917:0.002,0.078,0.919	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.919:0.002,0.077,0.921	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.56:0.008,0.425,0.568	0|0:0.009:0.991,0.009,0	1|1:1.886:0.004,0.107,0.89	1|1:2:0,0,1	1|1:1.887:0.004,0.105,0.891	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.862:0.005,0.128,0.867	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.179:0.833,0.156,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.079:0.922,0.077,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.956,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.88:0.004,0.113,0.883	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.878:0.004,0.115,0.882	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.864:0.005,0.126,0.869	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0.039:0.962,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.261:0.756,0.226,0.017	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.887:0.004,0.105,0.891	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.888:0.004,0.105,0.891	1|1:2:0,0,1	0|0:0.031:0.969,0.031,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.951,0.049,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.858:0.005,0.132,0.863	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.882:0.004,0.111,0.886	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.198:0.803,0.197,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.886:0.004,0.107,0.89	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:1.879:0.004,0.113,0.883	1|1:1.88:0.004,0.113,0.883	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.939:0.002,0.057,0.941	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.961:0.001,0.038,0.961	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16807398	SNP-3.16806271.	C	A	.	PASS	AR2=0.982;DR2=0.987;AF=0.479	GT:DS:GP	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.352:0.681,0.285,0.033	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.345:0.687,0.28,0.033	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.418:0.628,0.326,0.046	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.434:0.614,0.338,0.048	1|1:2:0,0,1	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.113:0.887,0.112,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.14:0.86,0.139,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.517:0.552,0.379,0.069	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.304:0.721,0.255,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.33:0.697,0.277,0.026	0|0:0.405:0.638,0.319,0.043	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.948:0.001,0.05,0.949	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.969:0,0.031,0.969	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.974:0,0.026,0.974	0|0:0:1,0,0
+3	16807958	SNP-3.16806831.	A	G	.	PASS	AR2=0.997;DR2=0.998;AF=0.297	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.062:0.939,0.06,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.946,0.053,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.983:0,0.017,0.983	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.433:0.001,0.565,0.434	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.921:0.001,0.077,0.922	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16811339	SNP-3.16810212.	A	G	.	PASS	AR2=1;DR2=1;AF=0.294	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16817640	SNP-3.16816513.	A	G	.	PASS	AR2=0.854;DR2=0.893;AF=0.343	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.289:0.733,0.246,0.022	0|0:0.287:0.732,0.25,0.018	0|0:0:1,0,0	0|0:0.583:0.529,0.358,0.112	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.1:0.211,0.479,0.311	0|1:1.055:0.203,0.54,0.258	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.843:0.333,0.492,0.175	0|0:0.197:0.821,0.16,0.019	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.989:0.256,0.5,0.244	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.244:0.143,0.47,0.387	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.346:0.107,0.44,0.453	0|0:0.651:0.537,0.275,0.188	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.089:0.912,0.087,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.308:0.126,0.44,0.434	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.421:0.083,0.413,0.504	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.363:0.102,0.433,0.465	0|0:0:1,0,0	0|1:0.455:0.548,0.45,0.002	0|1:1.326:0.114,0.447,0.44	1|0:0.512:0.493,0.503,0.005	0|0:0.056:0.945,0.053,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.347:0.107,0.439,0.454	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.35:0.106,0.438,0.456	1|0:1.355:0.104,0.437,0.459	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.284:0.742,0.233,0.025	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.343:0.108,0.441,0.451	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.614:0.467,0.453,0.08	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.689:0.407,0.496,0.096	0|1:0.994:0.179,0.648,0.173	1|0:0.793:0.321,0.565,0.114	1|0:0.734:0.362,0.542,0.096	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.34:0.691,0.277,0.031	0|0:0.001:0.999,0.001,0	0|0:0.115:0.887,0.11,0.002	0|0:0.27:0.747,0.236,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.166:0.175,0.484,0.341	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.588:0.505,0.403,0.093	0|0:0.502:0.551,0.396,0.053	0|0:0.108:0.894,0.104,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.508:0.55,0.391,0.059	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.428:0.621,0.33,0.049	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.342:0.108,0.441,0.451	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.799:0.363,0.476,0.161	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.842:0.342,0.473,0.184	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:1.211:0.164,0.461,0.375	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.305:0.727,0.241,0.032	1|1:2:0,0,1	0|0:0.176:0.83,0.165,0.005	0|1:0.818:0.351,0.48,0.169	0|0:0:1,0,0	0|1:0.96:0.269,0.503,0.229	0|1:0.854:0.329,0.487,0.184	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.045:0.958,0.04,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.315:0.118,0.45,0.432	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.13:0.194,0.481,0.324	0|0:0:1,0,0	0|0:0.157:0.856,0.132,0.013	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.363:0.102,0.434,0.465	1|1:1.35:0.106,0.438,0.456	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.767:0.384,0.466,0.151	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.028:0.24,0.493,0.268	1|0:0.896:0.305,0.494,0.201	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.3:0.125,0.451,0.425	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.958,0.041,0.001	1|0:1.356:0.104,0.436,0.46	1|1:1.344:0.108,0.44,0.452	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16817724	SNP-3.16816597.	A	G	.	PASS	AR2=0.928;DR2=0.942;AF=0.261	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.832:0.37,0.428,0.202	0|0:0.267:0.74,0.254,0.006	1|1:2:0,0,1	1|0:1.002:0.255,0.487,0.258	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.687:0.026,0.261,0.713	1|1:1.578:0.054,0.313,0.633	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.556:0.034,0.377,0.59	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.059:0.941,0.059,0	1|0:1.367:0.105,0.423,0.472	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.633:0.034,0.3,0.666	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.34:0.086,0.487,0.427	1|1:1.469:0.07,0.391,0.539	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.183:0.826,0.166,0.008	0|0:0:1,0,0	0|0:0.182:0.826,0.165,0.008	0|0:0:1,0,0	0|0:0.161:0.845,0.148,0.007	1|1:2:0,0,1	0|0:0.166:0.841,0.152,0.007	0|0:0:1,0,0	0|0:0.162:0.845,0.149,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.101:0.901,0.097,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.136:0.87,0.124,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.162:0.844,0.149,0.007	0|0:0:1,0,0	0|0:0.179:0.829,0.163,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.169:0.839,0.154,0.007	0|0:0.135:0.871,0.124,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.172:0.836,0.157,0.008	1|1:1.746:0.018,0.218,0.764	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.111:0.895,0.099,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.184:0.823,0.17,0.007	0|0:0.208:0.803,0.187,0.01	0|0:0:1,0,0	0|0:0.119:0.886,0.11,0.005	0|0:0.149:0.857,0.136,0.006	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.171:0.837,0.155,0.008	0|0:0:1,0,0	0|0:0.109:0.895,0.1,0.004	0|0:0:1,0,0	0|0:0.03:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.79:0.001,0.208,0.791	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.97,0.03,0	0|0:0:1,0,0	0|0:0.042:0.958,0.042,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.016,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.184:0.17,0.477,0.353	1|1:2:0,0,1	1|1:1.629:0.035,0.301,0.664	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.173:0.834,0.16,0.007	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.06:0.942,0.057,0.002	1|1:1.448:0.088,0.376,0.536	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.581:0.079,0.262,0.66	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.79:0.013,0.185,0.802	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.037:0.964,0.035,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.166:0.841,0.152,0.007	0|0:0:1,0,0	0|0:0.183:0.826,0.166,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.104:0.9,0.097,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.783:0.017,0.183,0.8	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.166:0.841,0.152,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.405:0.695,0.204,0.101	0|0:0.162:0.845,0.148,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.087:0.917,0.08,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.74:0.037,0.185,0.777	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16818214	SNP-3.16817087.	C	A	.	PASS	AR2=0.992;DR2=0.995;AF=0.396	GT:DS:GP	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.551:0.012,0.425,0.563	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.317:0.126,0.43,0.444	1|1:1.612:0.035,0.318,0.647	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.967:0,0.033,0.967	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.973:0.001,0.026,0.974	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16820497	SNP-3.16819370.	A	G	.	PASS	AR2=0.996;DR2=0.996;AF=0.294	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.947:0.001,0.051,0.948	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.951,0.048,0.001	0|0:0.026:0.974,0.026,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.971,0.028,0.001	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.044:0.956,0.044,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.044:0.957,0.043,0.001	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.993:0.009,0.988,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:1.94:0.002,0.056,0.942	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.1:0.904,0.091,0.005	0|0:0:1,0,0	1|1:1.852:0.009,0.129,0.861	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	1|1:1.975:0,0.024,0.975	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.968:0.001,0.031,0.968	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.891:0.014,0.081,0.905	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16820716	SNP-3.16819589.	A	G	.	PASS	AR2=1;DR2=1;AF=0.3	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.062:0.938,0.062,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16820765	SNP-3.16819638.	C	A	.	PASS	AR2=0.944;DR2=0.959;AF=0.402	GT:DS:GP	1|1:2:0,0,1	1|0:0.677:0.427,0.47,0.104	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.114:0.891,0.103,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.298:0.729,0.245,0.026	1|0:1.101:0.198,0.504,0.299	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.001:0.253,0.494,0.254	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.787:0.366,0.481,0.153	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.585:0.501,0.413,0.086	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.475:0.586,0.353,0.061	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.947,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.945,0.053,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.515:0.556,0.374,0.071	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.974:0.222,0.582,0.196	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.961,0.037,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.538:0.532,0.398,0.07	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.503:0.555,0.388,0.057	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.894:0.001,0.105,0.895	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.747:0.399,0.455,0.146	0|1:0.55:0.504,0.443,0.054	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.446:0.015,0.525,0.46	1|1:1.382:0.056,0.505,0.439	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.363:0.069,0.5,0.431	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.666:0.464,0.405,0.131	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.089:0.914,0.082,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.183:0.164,0.489,0.347	1|1:1.29:0.129,0.452,0.419	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.565:0.516,0.404,0.08	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.052:0.949,0.05,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.233:0.786,0.196,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.374:0.202,0.222,0.576	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.095:0.909,0.087,0.004
+3	16822183	SNP-3.16821056.	C	A	.	PASS	AR2=0.992;DR2=0.994;AF=0.395	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.661:0.025,0.289,0.686	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.828:0.008,0.156,0.836	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.886:0.003,0.107,0.889	1|0:1:0,1,0	1|1:1.73:0.001,0.269,0.731	0|0:0:1,0,0	1|1:1.952:0,0.048,0.952	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.864:0.004,0.128,0.868	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.83:0.006,0.158,0.836	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.963:0.001,0.035,0.964	1|1:2:0,0,1	1|1:1.369:0.046,0.539,0.415	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	16822258	SNP-3.16821131.	C	A	.	PASS	AR2=0.993;DR2=0.995;AF=0.392	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.776:0.013,0.199,0.788	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.767:0.015,0.203,0.782	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.601:0.036,0.327,0.637	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.764:0.015,0.207,0.778	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.888:0,0.112,0.888	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.759:0.015,0.211,0.774	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16822481	SNP-3.16821354.	A	G	.	PASS	AR2=0.891;DR2=0.917;AF=0.256	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.661:0.046,0.246,0.708	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.558:0.521,0.4,0.079	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.55:0.53,0.391,0.08	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.696:0.443,0.418,0.139	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.101:0.907,0.086,0.007	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.294:0.125,0.456,0.419	0|1:1.274:0.132,0.462,0.406	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.213:0.154,0.48,0.367	1|1:2:0,0,1	0|0:0.393:0.624,0.36,0.017	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.264:0.135,0.465,0.4	1|1:2:0,0,1	1|0:1.155:0.191,0.463,0.346	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:1.581:0.101,0.217,0.682	1|1:1.276:0.131,0.462,0.407	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.44:0.627,0.306,0.067	1|1:2:0,0,1	0|1:1.268:0.134,0.464,0.402	1|0:1.171:0.169,0.491,0.34	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.276:0.131,0.462,0.407	0|1:1.37:0.097,0.436,0.467	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.277:0.131,0.462,0.408	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.252:0.758,0.233,0.01	0|0:0:1,0,0	0|0:0.145:0.858,0.14,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.087:0.913,0.086,0	0|0:0.212:0.801,0.186,0.013	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.216:0.79,0.204,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.304:0.715,0.267,0.018	0|0:0.054:0.946,0.054,0	0|0:0.072:0.933,0.063,0.004	0|0:0.064:0.939,0.058,0.003	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0.191:0.815,0.179,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.986:0.082,0.849,0.069	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.248:0.139,0.473,0.387	1|1:2:0,0,1	1|0:0.914:0.086,0.913,0	0|0:0.178:0.827,0.169,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.166:0.842,0.15,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.626:0.471,0.432,0.097	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.489:0.566,0.378,0.055	1|1:2:0,0,1	0|0:0.219:0.812,0.157,0.031	1|1:2:0,0,1	1|1:1.286:0.128,0.459,0.413	0|0:0.473:0.587,0.352,0.061	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0.571:0.515,0.399,0.086	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.016:0.984,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.934,0.064,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.267:0.134,0.464,0.401	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.279:0.13,0.461,0.409	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.256:0.138,0.467,0.394	0|0:0:1,0,0	1|1:1.359:0.199,0.242,0.559	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.852:0.027,0.094,0.879	0|0:0:1,0,0	1|1:2:0,0,1
+3	16822667	SNP-3.16821540.	A	G	.	PASS	AR2=0.993;DR2=0.994;AF=0.319	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.944:0.31,0.437,0.254	0|0:0.206:0.805,0.184,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.973:0,0.027,0.973	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.958,0.042,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.081:0.92,0.079,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.059:0.001,0.94,0.059	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.798:0.002,0.198,0.8	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.021,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.83:0.001,0.168,0.831	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16824914	SNP-3.16823787.	C	A	.	PASS	AR2=0.972;DR2=0.977;AF=0.417	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.744:0.016,0.224,0.76	1|1:2:0,0,1	1|1:1.79:0.012,0.187,0.801	0|0:0:1,0,0	0|0:0.024:0.976,0.023,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0.033:0.968,0.032,0	0|0:0.1:0.901,0.099,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.269:0.74,0.251,0.009	0|0:0:1,0,0	0|0:0.266:0.742,0.251,0.007	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.951,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.1:0.096,0.707,0.197	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.075:0.927,0.071,0.002	0|0:0:1,0,0	0|0:0.039:0.961,0.039,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.875:0.011,0.104,0.886	1|1:2:0,0,1	1|1:1.823:0.009,0.16,0.832	1|1:2:0,0,1	1|1:1.666:0.023,0.287,0.689	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.305:0.076,0.543,0.381	0|0:0:1,0,0	1|1:1.671:0.023,0.283,0.694	1|1:2:0,0,1	1|1:1.726:0.015,0.245,0.74	0|1:1.227:0.097,0.578,0.325	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:1.774:0.015,0.196,0.789	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:1.65:0.031,0.288,0.681	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.949:0,0.051,0.949	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:1.94:0,0.06,0.94	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.851:0.005,0.139,0.856	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.704:0.021,0.254,0.725	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.832:0.006,0.156,0.838	1|1:2:0,0,1	1|1:1.909:0.001,0.09,0.91	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.955:0,0.045,0.955	1|1:1.989:0,0.011,0.989	1|1:1.971:0,0.029,0.971	1|1:1.962:0.001,0.037,0.962	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.842:0.008,0.143,0.849	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.078:0.924,0.075,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.973:0,0.027,0.973	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.052:0.949,0.05,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.956:0.001,0.042,0.957	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.406:0.054,0.487,0.46	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.919:0.001,0.078,0.92	1|1:1.762:0.016,0.206,0.778	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16826960	SNP-3.16825833.	A	G	.	PASS	AR2=0.903;DR2=0.929;AF=0.37	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.965:0.001,0.034,0.965	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.633:0.462,0.444,0.095	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.428:0.618,0.337,0.046	1|1:2:0,0,1	0|0:0.332:0.687,0.293,0.019	0|0:0:1,0,0	0|0:0.349:0.678,0.295,0.027	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.486:0.578,0.358,0.064	0|0:0.487:0.58,0.353,0.067	0|0:0:1,0,0	1|1:1.198:0.162,0.478,0.36	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.683:0.389,0.539,0.072	0|0:0.421:0.617,0.345,0.038	0|0:0.584:0.484,0.448,0.068	0|0:0.37:0.663,0.304,0.033	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.879:0.004,0.113,0.883	0|1:1.827:0.008,0.157,0.835	1|1:1.886:0.004,0.107,0.89	1|1:1.896:0.003,0.098,0.899	1|1:1.871:0.004,0.12,0.876	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.872:0.008,0.112,0.88	1|1:2:0,0,1	1|1:1.985:0,0.014,0.986	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.875:0.004,0.117,0.879	1|1:1.877:0.005,0.113,0.882	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.845:0.007,0.142,0.852	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.874:0.004,0.118,0.878	1|1:1.554:0,0.446,0.554	0|0:0.899:0.409,0.283,0.308	0|0:0.107:0.901,0.092,0.008	1|1:1.888:0.004,0.104,0.892	1|1:1.807:0.018,0.157,0.825	1|1:2:0,0,1	1|1:1.88:0.004,0.112,0.884	1|1:1.884:0.004,0.109,0.887	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.917:0.002,0.079,0.919	1|1:1.875:0.004,0.117,0.879	1|1:2:0,0,1	1|1:1.802:0.011,0.176,0.813	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.935,0.065,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.726:0.424,0.427,0.15	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.217:0.784,0.215,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	1|0:0.698:0.449,0.404,0.147	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.606:0.48,0.435,0.086	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.146:0.186,0.482,0.332	1|0:1.091:0.208,0.494,0.298	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.449:0.607,0.337,0.056	0|0:0:1,0,0	0|0:0.444:0.607,0.341,0.052	0|0:0.592:0.502,0.404,0.094	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.881:0.004,0.112,0.885	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.55:0.535,0.38,0.085	1|1:2:0,0,1	1|0:1.26:0.145,0.451,0.404	0|0:0:1,0,0	0|0:0.182:0.829,0.159,0.011	1|1:1.874:0.004,0.119,0.877	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.862:0.005,0.128,0.867	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.406:0.641,0.313,0.047	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.059:0.207,0.527,0.266	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.211:0.159,0.471,0.37	1|1:2:0,0,1	1|1:1.302:0.129,0.439,0.431	1|0:1.331:0.12,0.429,0.451	1|1:2:0,0,1	1|1:1.856:0.005,0.133,0.862	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.876:0.004,0.116,0.88	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.816:0.014,0.155,0.831	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.279:0.77,0.182,0.048	0|0:0.003:0.997,0.003,0	1|1:1.482:0.082,0.355,0.563	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.893:0.004,0.099,0.897
+3	16827601	SNP-3.16826474.	C	A	.	PASS	AR2=0.976;DR2=0.982;AF=0.408	GT:DS:GP	1|1:2:0,0,1	1|1:1.943:0.001,0.055,0.944	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.886:0.005,0.104,0.891	0|0:0:1,0,0	1|1:1.89:0.004,0.101,0.894	0|0:0.039:0.962,0.038,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.008:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.862:0.01,0.119,0.871	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.48:0.521,0.478,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.945:0.003,0.05,0.948	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.451:0.031,0.487,0.482	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.855:0.004,0.137,0.859	1|1:2:0,0,1	0|1:1.422:0.029,0.52,0.451	0|1:1.183:0.062,0.693,0.245	1|1:2:0,0,1	1|1:1.973:0.001,0.025,0.974	1|1:1.875:0.006,0.114,0.881	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:1.621:0.015,0.349,0.636	1|1:1.511:0.054,0.381,0.565	1|1:1.986:0,0.014,0.986	1|1:1.963:0,0.037,0.963	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.898:0.004,0.095,0.901	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.951:0.001,0.048,0.952	1|1:2:0,0,1	1|1:1.85:0.007,0.135,0.857	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.919:0.001,0.079,0.92	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.963:0,0.036,0.964	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	0|1:1.297:0.115,0.473,0.412	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.033:0.968,0.031,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.102:0.902,0.095,0.004	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.941,0.058,0.001	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0	1|1:1.957:0.001,0.041,0.958	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.942,0.057,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.163:0.849,0.14,0.012	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.956:0.001,0.043,0.957	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.569:0.02,0.392,0.588	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.871:0.005,0.119,0.876	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16830403	SNP-3.16829276.	A	G	.	PASS	AR2=0.956;DR2=0.963;AF=0.297	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.033:0.968,0.032,0.001	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.835:0.009,0.146,0.845	1|1:2:0,0,1	1|1:1.661:0.03,0.279,0.691	0|0:0:1,0,0	1|1:1.771:0.013,0.203,0.784	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	1|1:1.593:0.04,0.328,0.633	1|1:1.905:0.003,0.09,0.908	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:1.932:0.001,0.065,0.933	1|1:1.751:0.016,0.217,0.767	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.561:0.049,0.34,0.61	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.702:0.024,0.25,0.726	1|1:2:0,0,1	1|1:1.815:0.01,0.165,0.825	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.146:0.86,0.133,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.267:0.75,0.234,0.017	0|1:0.842:0.363,0.432,0.205	0|0:0.2:0.811,0.179,0.01	0|0:0.112:0.892,0.104,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.155:0.852,0.141,0.007	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.12:0.885,0.109,0.005	0|0:0:1,0,0	0|0:0.149:0.857,0.137,0.006	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.869:0,0.131,0.869	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.143:0.862,0.132,0.006	0|0:0.159:0.848,0.146,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.173:0.835,0.158,0.007	1|1:0.84:0.364,0.432,0.204	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0.052:0.948,0.052,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.705:0.026,0.243,0.731	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.153:0.854,0.139,0.007	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.836:0.008,0.147,0.844	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.025:0.975,0.025,0	1|1:1.9:0.003,0.095,0.903	1|1:1.647:0.032,0.288,0.68	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.675:0.034,0.257,0.709	0|0:0:1,0,0	0|0:0.037:0.964,0.034,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.134:0.871,0.124,0.005	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.82:0.011,0.158,0.831	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.62:0.02,0.341,0.64	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.973:0,0.026,0.973	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.949:0.001,0.048,0.951	1|1:2:0,0,1	1|1:1.878:0.004,0.114,0.882	1|1:2:0,0,1	0|0:0.158:0.849,0.144,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.155:0.852,0.141,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.151:0.856,0.138,0.006	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.111:0.894,0.102,0.004	0|0:0:1,0,0	0|0:0:1,0,0
+3	16833880	SNP-3.16832753.	A	G	.	PASS	AR2=0.896;DR2=0.92;AF=0.391	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.991:0,0.008,0.991	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.094:0.906,0.093,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.678:0.437,0.447,0.115	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.638:0.464,0.435,0.102	1|0:1:0,1,0	1|0:0.68:0.436,0.448,0.116	0|1:1:0,1,0	0|0:0.678:0.437,0.448,0.115	0|0:0:1,0,0	1|0:0.718:0.413,0.456,0.131	0|0:0:1,0,0	0|1:1:0,1,0	0|1:0.68:0.436,0.448,0.116	0|0:0.675:0.439,0.446,0.114	0|1:0.68:0.436,0.448,0.116	1|0:0.68:0.436,0.448,0.116	0|0:0.673:0.44,0.446,0.114	0|0:0.675:0.439,0.446,0.114	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.68:0.436,0.448,0.116	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.677:0.438,0.447,0.115	1|0:0.706:0.421,0.451,0.127	0|0:0.617:0.484,0.416,0.101	1|0:1:0,1,0	1|0:0.675:0.439,0.447,0.114	1|0:1:0,1,0	0|0:0.68:0.436,0.448,0.116	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0.623:0.477,0.422,0.101	1|0:1:0,1,0	1|0:0.565:0.52,0.396,0.085	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.654:0.4,0.546,0.054	0|0:0:1,0,0	1|0:0.68:0.436,0.448,0.116	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0.241:0.77,0.219,0.011	0|0:0:1,0,0	0|0:0.283:0.733,0.251,0.016	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.676:0.439,0.447,0.115	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.946,0.054,0	0|0:0:1,0,0	0|0:0.17:0.836,0.158,0.006	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.958,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.628:0.469,0.433,0.097	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.675:0.44,0.446,0.114	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.151:0.854,0.141,0.005	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.015:0.985,0.014,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.676:0.439,0.447,0.115	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.676:0.439,0.447,0.115	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.68:0.436,0.448,0.116	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.683:0.434,0.449,0.117	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.68:0.436,0.448,0.116	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.68:0.436,0.448,0.116	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.68:0.436,0.448,0.116	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.681:0.435,0.448,0.116	0|0:0.68:0.436,0.448,0.116	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.115:0.889,0.107,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.138:0.885,0.091,0.024	0|0:0:1,0,0	0|0:0.68:0.436,0.448,0.116
+3	16834732	SNP-3.16833605.	A	G	.	PASS	AR2=0.919;DR2=0.95;AF=0.509	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.4:0.09,0.419,0.491	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1.394:0.093,0.42,0.487	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.399:0.091,0.42,0.49	1|1:2:0,0,1	0|1:1:0,1,0	0|1:0.736:0.334,0.596,0.07	0|1:1:0,1,0	1|1:1.4:0.09,0.419,0.491	0|1:1.395:0.092,0.421,0.487	1|1:2:0,0,1	1|1:1.4:0.09,0.419,0.491	1|1:1.389:0.094,0.423,0.483	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.401:0.091,0.417,0.492	1|1:1.312:0.123,0.442,0.435	0|1:1.39:0.094,0.422,0.484	1|1:1.403:0.09,0.417,0.493	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.386:0.095,0.424,0.481	1|1:2:0,0,1	1|1:1.319:0.12,0.441,0.439	1|1:1.399:0.091,0.42,0.49	1|1:1.366:0.108,0.418,0.474	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.162:0.838,0.162,0	0|0:0:1,0,0	0|0:0.226:0.775,0.225,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.164:0.836,0.164,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.405:0.089,0.417,0.494	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.388:0.094,0.424,0.482	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.434:0.081,0.405,0.514	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.905:0.001,0.092,0.906	0|1:1.402:0.09,0.419,0.491	1|0:1.4:0.091,0.419,0.49	0|1:1.401:0.09,0.419,0.491	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.4:0.09,0.419,0.491	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.4:0.09,0.419,0.491	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.401:0.09,0.419,0.491	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0
+3	16834840	SNP-3.16833713.	C	A	.	PASS	AR2=0.993;DR2=0.994;AF=0.403	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.589:0.041,0.329,0.63	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.019:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.149:0.064,0.723,0.213	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1.364:0.088,0.46,0.452	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.976:0,0.024,0.976	0|1:1:0,1,0	1|1:1.875:0.006,0.114,0.881	1|0:1.064:0.016,0.905,0.08	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.952:0,0.048,0.952	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.024:0.976,0.023,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16838056	SNP-3.16836929.	A	G	.	PASS	AR2=0.991;DR2=0.992;AF=0.529	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.843:0.004,0.149,0.847	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.896:0.001,0.102,0.897	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.924:0.002,0.072,0.926	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.892:0.002,0.105,0.894	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:1.979:0,0.021,0.979	1|1:1.977:0,0.023,0.977	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.016,0.984	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.578:0.422,0.578,0	0|0:0:1,0,0	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	1|1:1.972:0,0.028,0.972	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.1:0.9,0.1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.991:0.03,0.948,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.781:0.015,0.189,0.796	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.963:0.001,0.034,0.965	1|1:2:0,0,1	1|1:1.802:0.006,0.187,0.807	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.895:0.003,0.098,0.898	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.97:0,0.03,0.97	1|1:1.902:0.003,0.092,0.905	1|1:1.952:0,0.047,0.953	1|1:1.968:0,0.031,0.968	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.955:0,0.044,0.956	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.98:0,0.02,0.98	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:1.99:0,0.01,0.99	1|1:1.964:0,0.035,0.964	1|1:1.97:0,0.03,0.97	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16840375	SNP-3.16839248.	C	A	.	PASS	AR2=0.978;DR2=0.983;AF=0.416	GT:DS:GP	1|1:1.875:0,0.125,0.875	0|0:0:1,0,0	0|0:0.174:0.834,0.158,0.008	0|0:0.358:0.669,0.303,0.027	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.045:0.955,0.044,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.999:0,0.001,0.999	0|0:0.047:0.954,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.035:0.965,0.034,0	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.932,0.066,0.002	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.048:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.947:0.001,0.051,0.948	0|0:0.083:0.918,0.08,0.002	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.121:0.883,0.114,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	1|0:0.559:0.46,0.522,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.103:0.9,0.097,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.107:0.896,0.101,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.129:0.875,0.121,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.979,0.021,0.001	1|1:2:0,0,1	1|1:1.474:0.155,0.216,0.629	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.967:0,0.032,0.967	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.894:0.005,0.097,0.898	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.932:0,0.067,0.933	1|1:1.958:0.001,0.04,0.959	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0.503:0.51,0.478,0.013	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.033:0.967,0.032,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.943:0.001,0.055,0.944	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.984:0,0.016,0.984	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.976:0,0.024,0.976	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.143:0.863,0.131,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.108:0.895,0.102,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.929:0,0.07,0.93	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.141:0.863,0.133,0.004	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0.06:0.942,0.057,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.011:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.711:0.079,0.132,0.789	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0.197:0.808,0.187,0.005	0|0:0:1,0,0	0|0:0.021:0.98,0.02,0.001	1|1:2:0,0,1	0|0:0:1,0,0
+3	16841473	SNP-3.16840346.	A	G	.	PASS	AR2=0.899;DR2=0.926;AF=0.298	GT:DS:GP	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|0:1.17:0.164,0.503,0.333	1|1:1.89:0.001,0.108,0.891	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.28:0.739,0.242,0.019	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.092:0.91,0.087,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.309:0.717,0.258,0.026	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.04:0.961,0.038,0.001	0|0:0.255:0.765,0.214,0.02	0|0:0.178:0.829,0.163,0.008	0|0:0:1,0,0	0|0:0.6:0.498,0.404,0.098	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.487:0.569,0.375,0.056	1|0:0.888:0.296,0.519,0.185	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	1|1:1.582:0.038,0.342,0.62	1|1:1.575:0.046,0.333,0.621	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.574:0.025,0.375,0.599	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.659:0.03,0.281,0.689	1|1:2:0,0,1	0|1:1.627:0.034,0.305,0.661	1|1:2:0,0,1	1|1:1.61:0.04,0.311,0.65	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.639:0.033,0.295,0.672	0|1:1.614:0.037,0.311,0.652	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.889:0.413,0.285,0.302	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.579:0.046,0.329,0.625	0|0:0:1,0,0	1|1:1.687:0.028,0.257,0.715	1|1:1.676:0.028,0.268,0.704	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.629:0.035,0.3,0.665	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.901:0.328,0.444,0.229	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.202:0.808,0.182,0.01	0|0:0:1,0,0	1|1:1.618:0.037,0.308,0.655	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.598:0.042,0.319,0.64	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.495:0.556,0.393,0.051	0|0:0.097:0.904,0.095,0.001	0|0:0:1,0,0	0|0:0.221:0.792,0.196,0.012	1|1:1.619:0.037,0.306,0.656	1|1:1.635:0.033,0.299,0.668	0|0:0:1,0,0	0|0:0.34:0.784,0.093,0.124	1|1:1.625:0.032,0.311,0.657	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.313:0.715,0.258,0.027	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.432:0.615,0.337,0.048	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.622:0.036,0.306,0.658	0|0:0:1,0,0	1|1:1.36:0.167,0.305,0.527	0|0:0:1,0,0	0|0:0.156:0.853,0.137,0.009	1|1:1.618:0.037,0.308,0.655	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.156:0.851,0.143,0.006	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.629:0.034,0.303,0.663	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.082:0.92,0.078,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.978,0.022,0	0|0:0.161:0.846,0.148,0.007	0|0:0:1,0,0	0|0:0.138:0.867,0.128,0.005	0|0:0:1,0,0	0|0:0.059:0.943,0.055,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.863:0.01,0.117,0.873	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.854:0.009,0.129,0.863	1|1:2:0,0,1	1|1:1.866:0.01,0.115,0.875	1|1:1.944:0.001,0.053,0.946	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.965:0.418,0.198,0.384	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.871:0.009,0.11,0.881	0|0:0:1,0,0	1|1:2:0,0,1
+3	16841580	SNP-3.16840453.	C	A	.	PASS	AR2=0.989;DR2=0.992;AF=0.383	GT:DS:GP	1|1:1.982:0,0.018,0.982	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.889:0.111,0.889,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.793:0.027,0.154,0.819	1|1:2:0,0,1	1|1:1.57:0.064,0.302,0.634	1|1:2:0,0,1	0|1:1.517:0.053,0.377,0.57	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.701:0.011,0.277,0.712	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.748:0.004,0.245,0.751	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.645:0.022,0.311,0.667	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0,0.031,0.968	1|1:2:0,0,1	1|1:1.965:0,0.035,0.965	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16842371	SNP-3.16841244.	A	G	.	PASS	AR2=0.962;DR2=0.975;AF=0.258	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.505:0.063,0.369,0.568	1|1:1.426:0.083,0.408,0.509	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.396:0.093,0.418,0.489	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1.426:0.083,0.408,0.509	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.418:0.085,0.412,0.503	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.313:0.709,0.27,0.022	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.137:0.867,0.129,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.424:0.083,0.409,0.508	0|0:0:1,0,0	0|0:0.125:0.876,0.124,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.017,0	0|1:1:0,1,0	1|1:1.683:0.034,0.248,0.718	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.423:0.084,0.41,0.507	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.757:0.018,0.207,0.775	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.803:0.016,0.165,0.819	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0
+3	16842419	SNP-3.16841292.	C	A	.	PASS	AR2=1;DR2=1;AF=0.397	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16842546	SNP-3.16841419.	A	G	.	PASS	AR2=0.965;DR2=0.975;AF=0.267	GT:DS:GP	0|0:0:1,0,0	0|1:0.9:0.306,0.487,0.206	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.894:0.004,0.097,0.898	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.694:0.028,0.25,0.722	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.469:0.054,0.423,0.523	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.748:0.018,0.216,0.766	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.728:0.019,0.233,0.747	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1.426:0.084,0.406,0.51	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.594:0.046,0.315,0.64	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.532:0.043,0.381,0.576	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.617:0.038,0.306,0.655	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.514:0.065,0.357,0.578	1|1:2:0,0,1	1|1:1.571:0.047,0.335,0.618	1|1:1.594:0.043,0.319,0.638	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16842798	SNP-3.16841671.	A	G	.	PASS	AR2=0.957;DR2=0.971;AF=0.305	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.484:0.083,0.349,0.568	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.957:0.001,0.041,0.958	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.704:0.013,0.269,0.718	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.791:0.012,0.185,0.803	1|1:2:0,0,1	0|1:1.648:0.02,0.313,0.667	1|1:1.776:0.012,0.2,0.788	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.919:0.081,0.918,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.856:0.005,0.133,0.861	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.859:0.005,0.131,0.864	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.647:0.02,0.313,0.667	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.634:0.021,0.324,0.655	1|1:2:0,0,1	1|1:1.616:0.04,0.304,0.656	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.178:0.251,0.321,0.429	0|0:0:1,0,0	1|1:1.632:0.04,0.287,0.672	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.655:0.019,0.308,0.673	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.192:0.222,0.364,0.414	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.326:0.096,0.483,0.421	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.865:0.005,0.126,0.87	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.858:0.006,0.13,0.864	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.159:0.254,0.332,0.414	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16843300	SNP-3.16842173.	A	G	.	PASS	AR2=0.96;DR2=0.968;AF=0.28	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.136:0.87,0.124,0.006	0|0:0.248:0.761,0.23,0.009	0|0:0:1,0,0	0|0:0.246:0.766,0.221,0.013	0|0:0.211:0.797,0.195,0.008	0|0:0:1,0,0	0|0:0.144:0.863,0.131,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.173:0.834,0.16,0.006	0|0:0.208:0.802,0.188,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.011,0	0|0:0:1,0,0	0|0:0.151:0.855,0.138,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.432:0.604,0.36,0.036	0|0:0:1,0,0	0|0:0.16:0.847,0.145,0.008	0|0:0.168:0.838,0.156,0.006	0|0:0.207:0.799,0.195,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.929:0.104,0.863,0.033	0|0:0:1,0,0	0|0:0.108:0.893,0.106,0.001	1|0:1:0,1,0	0|1:0.728:0.292,0.688,0.02	1|0:1:0,1,0	0|0:0.343:0.683,0.292,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.282:0.743,0.233,0.024	0|0:0:1,0,0	0|0:0.164:0.843,0.151,0.007	0|0:0:1,0,0	0|0:0.418:0.59,0.401,0.009	0|0:0.124:0.881,0.115,0.004	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.305:0.723,0.249,0.028	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.167:0.845,0.143,0.012	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.178:0.831,0.161,0.009	0|0:0.139:0.867,0.126,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.303:0.726,0.246,0.028	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.202:0.814,0.171,0.016	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.312:0.717,0.254,0.029	0|0:0.143:0.864,0.13,0.006	0|0:0.277:0.741,0.242,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0.137:0.869,0.125,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.283:0.745,0.226,0.028	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.947,0.051,0.003	0|0:0:1,0,0	0|0:0:1,0,0
+3	16855971	SNP-3.16854844.	A	G	.	PASS	AR2=0.991;DR2=0.993;AF=0.351	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.096:0.906,0.093,0.001	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.132:0.875,0.117,0.007	0|0:0.282:0.739,0.24,0.021	0|0:0.301:0.717,0.265,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.209:0.805,0.181,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.967:0,0.032,0.968	1|1:2:0,0,1	1|1:1.983:0,0.016,0.983	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	0|1:1:0,1,0	1|1:1.962:0,0.037,0.962	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.881:0.001,0.118,0.882	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:0.497:0.512,0.479,0.009	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16856289	SNP-3.16855162.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.236	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.067:0.934,0.065,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.007:0.044,0.906,0.05	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16856475	SNP-3.16855348.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.4	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.045:0.955,0.045,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	0|0:0.026:0.974,0.025,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	1|1:2:0,0,1	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.97,0.03,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.435:0.57,0.425,0.005	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.044:0.957,0.043,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.087:0.922,0.069,0.009	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16861320	SNP-3.16860193.	C	A	.	PASS	AR2=0.986;DR2=0.99;AF=0.379	GT:DS:GP	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.951:0,0.048,0.952	0|0:0.001:0.999,0.001,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.947:0.053,0.947,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1.271:0.024,0.682,0.295	1|0:1.432:0.017,0.534,0.449	0|1:1.268:0.024,0.684,0.292	1|1:1.662:0.028,0.282,0.69	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.81:0.004,0.183,0.813	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.642:0.018,0.323,0.66	1|1:1.877:0.005,0.113,0.882	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.277:0.018,0.686,0.296	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.018,0.982	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.031:0.969,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.5:0.023,0.454,0.523	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16861617	SNP-3.16860490.	A	G	.	PASS	AR2=0.979;DR2=0.982;AF=0.253	GT:DS:GP	0|0:0:1,0,0	0|0:0.054:0.948,0.05,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.21:0.796,0.198,0.006	0|0:0.054:0.948,0.05,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.156:0.845,0.154,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.939:0.001,0.059,0.94	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.892:0.002,0.104,0.894	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.115:0.888,0.109,0.003	1|1:2:0,0,1	0|0:0.088:0.913,0.085,0.002	0|0:0.144:0.861,0.133,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.121:0.883,0.114,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.101:0.9,0.099,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.149:0.856,0.138,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.142:0.864,0.131,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.075:0.928,0.07,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.132:0.872,0.123,0.005	0|0:0.128:0.876,0.119,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.969,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.955,0.044,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.135:0.873,0.119,0.008	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|1:1.13:0.02,0.83,0.15	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0.15:0.856,0.138,0.006	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.142:0.863,0.132,0.005	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0.058:0.942,0.058,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.957:0,0.042,0.958	1|1:2:0,0,1	0|0:0.142:0.863,0.131,0.005	0|0:0.104:0.901,0.094,0.005	0|0:0.004:0.996,0.004,0	0|0:0.123:0.881,0.115,0.004	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.473:0.528,0.471,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.104:0.9,0.096,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.901:0.003,0.092,0.904	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.019,0.981	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.021:0.979,0.021,0	0|0:0.082:0.919,0.08,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16861796	SNP-3.16860669.	C	A	.	PASS	AR2=0.977;DR2=0.98;AF=0.44	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.059:0.944,0.052,0.004	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	0|0:0.045:0.956,0.043,0.001	0|1:1:0,1,0	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	0|0:0.168:0.841,0.15,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.203:0.808,0.182,0.01	0|0:0.199:0.811,0.179,0.01	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0.203:0.808,0.182,0.01	0|0:0.212:0.799,0.189,0.011	0|1:1:0,1,0	0|0:0.21:0.801,0.188,0.011	0|0:0:1,0,0	0|0:0.19:0.819,0.173,0.008	0|0:0:1,0,0	0|0:0.209:0.802,0.187,0.011	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.197:0.813,0.178,0.01	1|0:1:0,1,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.262:0.797,0.144,0.059	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.967,0.032,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:1.989:0,0.011,0.989	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.01:0.99,0.01,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.176:0.831,0.161,0.007	0|0:0.21:0.801,0.188,0.011	0|0:0.273:0.749,0.229,0.022	0|0:0:1,0,0	0|0:0.218:0.794,0.194,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.196:0.813,0.177,0.01	0|0:0:1,0,0	0|0:0.218:0.794,0.194,0.012	0|0:0.199:0.811,0.179,0.01	0|0:0.18:0.828,0.164,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.944,0.056,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.196:0.814,0.177,0.01	1|0:1:0,1,0	0|0:0.19:0.818,0.173,0.009	1|1:2:0,0,1	0|0:0.21:0.801,0.188,0.011	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.192:0.818,0.173,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.049,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.153:0.858,0.132,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0
+3	16864273	SNP-3.16863146.	A	G	.	PASS	AR2=0.991;DR2=0.993;AF=0.422	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.95:0.055,0.94,0.005	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.932:0.002,0.065,0.933	1|1:1.297:0.032,0.639,0.329	1|1:1.887:0.003,0.106,0.89	1|1:2:0,0,1	1|1:1.897:0.004,0.094,0.902	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.909:0.002,0.086,0.911	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.844:0.004,0.147,0.849	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.527:0.024,0.424,0.552	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.848:0.005,0.143,0.852	1|1:2:0,0,1	1|1:1.933:0.002,0.063,0.935	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.929:0.001,0.068,0.93	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.909:0.002,0.086,0.911	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.898:0.003,0.097,0.901	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16865191	SNP-3.16864064.	A	G	.	PASS	AR2=1;DR2=1;AF=0.233	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16865836	SNP-3.16864709.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.408	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.924:0.002,0.072,0.926	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.913:0.003,0.08,0.917	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.964:0.001,0.034,0.965	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.906:0.003,0.087,0.909	1|1:1.977:0.001,0.022,0.977	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16866568	SNP-3.16865441.	A	G	.	PASS	AR2=0.853;DR2=0.867;AF=0.299	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.084:0.211,0.494,0.295	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.304:0.111,0.474,0.415	0|0:0:1,0,0	1|0:1.056:0.224,0.495,0.281	1|1:2:0,0,1	0|1:1.073:0.216,0.496,0.288	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.387:0.095,0.422,0.483	1|0:1.083:0.211,0.495,0.294	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.313:0.101,0.485,0.414	1|1:1.272:0.118,0.492,0.39	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.041:0.231,0.497,0.272	0|0:0:1,0,0	1|1:1.032:0.235,0.497,0.268	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.024:0.238,0.501,0.261	0|0:1.042:0.231,0.497,0.273	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.243:0.772,0.214,0.014	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.985:0.262,0.491,0.247	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.993:0.256,0.494,0.249	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.938:0.3,0.462,0.238	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.157:0.193,0.457,0.35	0|0:0.423:0.641,0.295,0.064	0|0:0:1,0,0	1|0:1.042:0.231,0.497,0.273	0|0:0:1,0,0	1|1:0.97:0.265,0.499,0.235	0|0:0.327:0.707,0.258,0.035	0|0:0.926:0.289,0.497,0.214	0|0:0.964:0.272,0.491,0.237	1|0:0.928:0.281,0.51,0.209	0|1:0.835:0.365,0.436,0.2	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.09:0.911,0.088,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.898:0.3,0.502,0.198	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.093:0.223,0.461,0.316	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.432:0.638,0.292,0.07	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.179:0.833,0.155,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.029:0.972,0.028,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.042:0.231,0.497,0.273	0|0:0.23:0.782,0.206,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.245:0.142,0.47,0.388	1|0:1.073:0.216,0.495,0.289	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.096:0.206,0.492,0.302	0|0:1.231:0.128,0.513,0.359	1|0:1.053:0.249,0.448,0.303	1|1:2:0,0,1	0|0:0.143:0.87,0.117,0.013	1|0:1.339:0.12,0.42,0.46	0|0:0:1,0,0	1|0:1.058:0.224,0.495,0.281	0|0:0:1,0,0	0|0:0.409:0.656,0.28,0.065	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.103:0.203,0.492,0.306	0|0:0:1,0,0	1|1:1.268:0.128,0.476,0.396	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.056:0.946,0.053,0.002	1|0:0.98:0.266,0.487,0.246	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.058:0.224,0.495,0.281	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.079:0.213,0.495,0.292	0|0:0.704:0.449,0.399,0.153	0|0:0.04:0.96,0.04,0	0|0:0.252:0.765,0.217,0.017	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.15:0.183,0.485,0.332	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.952:0.301,0.446,0.253	0|1:1.078:0.214,0.494,0.292	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.042:0.231,0.497,0.273	1|0:0.936:0.286,0.493,0.222	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.279:0.734,0.253,0.013	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.036:0.234,0.497,0.27	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:1.076:0.209,0.505,0.286	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.946,0.053,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.214:0.812,0.161,0.027	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16867052	SNP-3.16865925.	A	G	.	PASS	AR2=0.885;DR2=0.888;AF=0.337	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.206:0.173,0.449,0.378	0|0:1.077:0.213,0.497,0.29	0|1:1.077:0.213,0.497,0.29	0|1:1.077:0.213,0.497,0.29	1|0:1.077:0.213,0.497,0.29	1|0:1.077:0.213,0.497,0.29	0|0:0:1,0,0	1|0:1.059:0.221,0.498,0.28	1|0:1.03:0.236,0.498,0.266	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.059:0.221,0.498,0.28	1|0:1.164:0.184,0.468,0.348	1|0:1.059:0.221,0.498,0.28	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1.077:0.213,0.497,0.29	1|0:1.038:0.232,0.498,0.27	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1.03:0.236,0.498,0.266	1|0:1.06:0.221,0.498,0.281	1|0:1:0,1,0	0|1:1.077:0.213,0.497,0.29	0|1:1.077:0.213,0.497,0.29	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.628:0.004,0.364,0.632	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.855:0.017,0.112,0.871	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.812:0.005,0.179,0.817	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|1:1.038:0.232,0.498,0.27	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.8:0.345,0.511,0.145	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.134:0.187,0.492,0.321	1|0:1.059:0.221,0.498,0.28	0|1:1.08:0.213,0.494,0.293	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1.077:0.213,0.497,0.29	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.838:0.017,0.128,0.855	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.061:0.22,0.498,0.282	1|0:1.038:0.232,0.498,0.27	0|0:0:1,0,0	1|0:1.077:0.213,0.497,0.29	0|0:1.1:0.203,0.495,0.303	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.025:0.975,0.024,0	0|0:0:1,0,0	0|0:1.077:0.213,0.497,0.29	1|1:2:0,0,1	1|1:1.038:0.232,0.498,0.27	0|1:1:0,1,0	0|1:1.077:0.213,0.497,0.29	1|0:1.046:0.229,0.497,0.274	0|0:0:1,0,0	0|1:1.059:0.221,0.498,0.281	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.734:0.007,0.252,0.741	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1.038:0.232,0.498,0.27	1|1:2:0,0,1	0|1:1.038:0.232,0.498,0.27	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.038:0.232,0.498,0.27	0|1:1:0,1,0	1|0:1.084:0.21,0.496,0.294	1|1:1.059:0.221,0.498,0.28	1|0:1.059:0.221,0.498,0.28	0|1:1:0,1,0	0|1:1.142:0.189,0.48,0.331	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.844:0.017,0.123,0.86	1|1:1.038:0.232,0.498,0.27	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16867616	SNP-3.16866489.	A	G	.	PASS	AR2=0.988;DR2=0.99;AF=0.296	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.863:0.007,0.124,0.869	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.797:0.011,0.182,0.808	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.781:0.012,0.195,0.793	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.519:0.066,0.349,0.585	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.227:0.788,0.197,0.015	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.807:0.01,0.174,0.816	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.926:0,0.073,0.926	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.768:0.014,0.205,0.782	0|0:0:1,0,0	1|1:1.857:0.007,0.129,0.864	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.841:0.011,0.137,0.852	0|0:0:1,0,0	1|1:1.954:0.001,0.045,0.954	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.967:0,0.032,0.968	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16867809	SNP-3.16866682.	A	G	.	PASS	AR2=0.966;DR2=0.973;AF=0.348	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.133:0.871,0.124,0.004	0|0:0.052:0.949,0.051,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.401:0.64,0.319,0.041	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.856:0.007,0.131,0.862	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.349:0.681,0.288,0.031	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.856:0.007,0.131,0.862	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.044:0.956,0.044,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.907:0.002,0.088,0.91	0|0:0:1,0,0	0|0:0.019:0.982,0.018,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	0|0:0.384:0.645,0.327,0.029	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.052:0.948,0.051,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.349:0.681,0.288,0.031	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.56:0.057,0.326,0.617	1|0:1.164:0.169,0.498,0.333	0|0:0.004:0.996,0.004,0	0|0:0.204:0.808,0.18,0.012	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.295:0.707,0.29,0.002	1|1:1.941:0,0.059,0.941	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.932,0.066,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.959,0.04,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.128:0.873,0.127,0	0|0:0.018:0.982,0.017,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.097:0.214,0.475,0.311	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.09:0.912,0.087,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.063:0.942,0.053,0.005	1|1:1.841:0.007,0.145,0.848	0|0:0:1,0,0	0|0:0.357:0.675,0.293,0.032	0|0:0.351:0.68,0.289,0.031	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.093:0.915,0.078,0.007	1|1:1.992:0,0.008,0.992	1|1:1.836:0.005,0.155,0.84	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.03:0.97,0.03,0	0|0:0:1,0,0	0|0:0.044:0.956,0.044,0	1|1:2:0,0,1	0|0:0.019:0.982,0.018,0	0|0:0.351:0.68,0.289,0.031	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.964:0,0.036,0.964	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.964:0,0.036,0.964	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.963:0,0.037,0.963	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.349:0.681,0.288,0.031	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.826:0.008,0.157,0.834	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.862:0.007,0.125,0.869	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.984:0,0.016,0.984	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.991:0,0.009,0.991	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16868418	SNP-3.16867291.	A	G	.	PASS	AR2=0.996;DR2=0.997;AF=0.324	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.007:0,0.993,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.969:0,0.031,0.969	1|1:2:0,0,1	0|0:0.069:0.932,0.066,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.909:0.002,0.087,0.911	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.246:0.771,0.212,0.017	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.191:0.068,0.674,0.259	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16868554	SNP-3.16867427.	C	A	.	PASS	AR2=0.986;DR2=0.987;AF=0.408	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.231:0.783,0.203,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.216:0.795,0.193,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.087:0.916,0.081,0.003	0|0:0.044:0.958,0.04,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.961,0.039,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.312:0.699,0.289,0.011	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.098:0.902,0.097,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.083:0.214,0.489,0.297	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.117:0.196,0.492,0.313	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.218:0.794,0.194,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.011:0.989,0.011,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.087:0.913,0.087,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.208:0.803,0.186,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.12:0.195,0.491,0.314	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.021:0.979,0.02,0
+3	16869013	SNP-3.16867886.	A	G	.	PASS	AR2=1;DR2=1;AF=0.451	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16869049	SNP-3.16867922.	C	A	.	PASS	AR2=0.993;DR2=0.993;AF=0.377	GT:DS:GP	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.02:0.98,0.02,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.921:0.293,0.492,0.214	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.918:0.293,0.496,0.211	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.915:0.295,0.495,0.21	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16869162	SNP-3.16868035.	A	G	.	PASS	AR2=0.955;DR2=0.966;AF=0.277	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.967,0.033,0.001	1|1:1.631:0.041,0.287,0.672	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.871:0.003,0.122,0.875	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.85:0.315,0.52,0.165	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.46:0,0.54,0.46	0|0:0:1,0,0	1|1:1.618:0.033,0.316,0.651	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.946:0.001,0.052,0.947	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.425:0.098,0.379,0.523	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.364:0.101,0.434,0.465	0|1:1.199:0.093,0.616,0.291	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.649:0.06,0.231,0.709	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.949:0.001,0.05,0.949	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.025:0.191,0.594,0.216	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.831:0.008,0.152,0.84	0|0:0.012:0.988,0.012,0	1|1:1.648:0.06,0.232,0.708	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.864:0.007,0.122,0.871	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.206:0.045,0.704,0.251	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.648:0.06,0.233,0.707	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.855:0.005,0.134,0.861	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.802:0.024,0.149,0.827	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.628:0.062,0.249,0.689	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.531:0.12,0.229,0.651	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.941:0.001,0.056,0.943	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.83:0.013,0.143,0.844	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.394:0.112,0.382,0.506	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16869256	SNP-3.16868129.	A	G	.	PASS	AR2=0.889;DR2=0.909;AF=0.216	GT:DS:GP	1|1:2:0,0,1	0|0:0.073:0.932,0.062,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.191:0.82,0.169,0.011	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.923:0.281,0.514,0.204	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.798:0.36,0.482,0.158	1|1:2:0,0,1	0|0:0.458:0.595,0.351,0.054	0|0:0.174:0.837,0.152,0.011	1|1:1.276:0.118,0.487,0.394	1|1:2:0,0,1	0|1:1.038:0.229,0.503,0.268	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.458:0.595,0.351,0.054	0|0:0:1,0,0	0|0:0.462:0.592,0.353,0.055	0|0:0.858:0.337,0.467,0.196	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.148:0.866,0.12,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.141:0.864,0.131,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.06:0.162,0.616,0.222	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.734:0.4,0.466,0.134	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.089:0.914,0.084,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.479:0.58,0.361,0.059	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.374:0.098,0.431,0.471	0|0:0.22:0.789,0.203,0.009	0|0:0.176:0.835,0.155,0.011	0|0:0:1,0,0	0|0:0.103:0.899,0.099,0.002	0|0:0.377:0.65,0.324,0.027	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.03:0.971,0.028,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.865:0.336,0.463,0.201	0|0:0:1,0,0	1|0:0.968:0.154,0.724,0.122	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.292:0.736,0.236,0.028	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.072:0.932,0.065,0.003	0|0:0.203:0.804,0.189,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.168:0.839,0.154,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.952,0.048,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.832:0.389,0.39,0.221	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.953,0.046,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.077:0.925,0.073,0.002	0|0:0:1,0,0	0|1:0.98:0.256,0.509,0.235	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.917:0.294,0.495,0.211	0|0:0.457:0.596,0.351,0.053	0|0:0:1,0,0	0|0:0.466:0.589,0.356,0.055	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.226:0.807,0.16,0.033	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.462:0.593,0.352,0.055	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.481:0.577,0.364,0.058	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.688:0.462,0.388,0.15	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.897:0.299,0.506,0.195	0|0:0.17:0.836,0.157,0.007	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.139:0.868,0.125,0.007	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.908:0.329,0.435,0.236	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.951:0.277,0.495,0.228	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.065:0.937,0.062,0.002	0|0:0:1,0,0	0|0:0.084:0.92,0.077,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.831:0.012,0.144,0.844	0|0:0:1,0,0	0|0:0.021:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.187:0.819,0.175,0.006	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.95,0.048,0.002	0|0:0:1,0,0
+3	16869645	SNP-3.16868518.	C	A	.	PASS	AR2=0.995;DR2=0.996;AF=0.49	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.634:0.084,0.198,0.718	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.025:0.239,0.497,0.264	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16873120	SNP-3.16871993.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.455	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.159:0.843,0.154,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.517:0.623,0.236,0.14	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.977:0,0.022,0.977	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16873753	SNP-3.16872626.	A	G	.	PASS	AR2=0.987;DR2=0.989;AF=0.252	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.83:0.007,0.155,0.838	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.823:0.008,0.161,0.831	1|1:1.822:0.008,0.162,0.83	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.841:0.007,0.145,0.848	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.864:0.004,0.128,0.868	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.823:0.008,0.161,0.831	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.823:0.008,0.161,0.831	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.823:0.008,0.161,0.831	1|1:1.861:0.005,0.129,0.866	1|1:2:0,0,1	1|1:1.934:0.001,0.063,0.936	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.861:0.004,0.131,0.865	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.824:0.008,0.16,0.832	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.822:0.008,0.162,0.83	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.823:0.008,0.161,0.831	1|1:1.964:0.002,0.033,0.966	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:1.913:0.003,0.081,0.916	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16874793	SNP-3.16873666.	C	A	.	PASS	AR2=0.992;DR2=0.996;AF=0.434	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.041:0.959,0.04,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.012:0.399,0.19,0.411	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.046:0.955,0.045,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16874827	SNP-3.16873700.	C	A	.	PASS	AR2=1;DR2=1;AF=0.424	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16875286	SNP-3.16874159.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.251	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.939:0.002,0.057,0.941	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.937:0.003,0.058,0.939	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.939:0.002,0.058,0.94	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16876042	SNP-3.16874915.	A	G	.	PASS	AR2=0.98;DR2=0.984;AF=0.511	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.359:0.641,0.359,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.738:0.017,0.227,0.756	1|1:1.734:0.018,0.23,0.752	1|1:1.724:0.019,0.238,0.743	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.737:0.022,0.22,0.758	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.719:0.02,0.242,0.739	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.945:0.001,0.053,0.946	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.731:0.018,0.233,0.749	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.612:0.031,0.326,0.643	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.732:0.018,0.232,0.75	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.73:0.018,0.233,0.748	1|1:2:0,0,1	1|0:1.125:0.02,0.834,0.145	0|0:0:1,0,0	1|1:1.886:0.005,0.103,0.892	1|0:1:0,1,0	1|1:1.724:0.019,0.239,0.742	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.725:0.019,0.237,0.744	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.895:0.004,0.097,0.899	0|0:0:1,0,0	1|1:1.913:0.002,0.083,0.915	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.852:0.006,0.137,0.857	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.949:0.001,0.05,0.949	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.937:0.002,0.059,0.939	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16876766	SNP-3.16875639.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.408	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.018:0,0.981,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.973:0,0.027,0.973	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.961:0.001,0.038,0.962	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.85:0.002,0.146,0.852	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16877583	SNP-3.16876456.	A	G	.	PASS	AR2=1;DR2=1;AF=0.2	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16878653	SNP-3.16877526.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.4	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.988:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.89:0.006,0.099,0.895	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16879736	SNP-3.16878609.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.413	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.98,0.02,0.001	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.235:0.019,0.727,0.254	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0,0.024,0.976	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.038:0.962,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.065:0.935,0.065,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16881068	SNP-3.16879941.	C	A	.	PASS	AR2=0.908;DR2=0.928;AF=0.313	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.11:0.21,0.471,0.319	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.781:0.015,0.19,0.796	1|1:1.93:0.003,0.064,0.933	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.108:0.895,0.101,0.003	0|0:0:1,0,0	0|0:0.108:0.895,0.101,0.003	0|0:0.693:0.442,0.423,0.135	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.197:0.813,0.176,0.01	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.094:0.909,0.089,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.941,0.058,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.317:0.702,0.279,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.169:0.842,0.147,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.399:0.622,0.357,0.021	0|0:0.093:0.91,0.087,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.24:0.796,0.168,0.036	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.098:0.905,0.092,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.145:0.862,0.131,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.075:0.927,0.071,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.203:0.169,0.459,0.372	1|1:2:0,0,1	1|1:1.191:0.184,0.44,0.376	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.587:0.061,0.292,0.647	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.281:0.153,0.413,0.434	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.88:0.011,0.098,0.891	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.858:0.007,0.128,0.865	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.167:0.836,0.16,0.004	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.632:0.01,0.348,0.642	0|0:0:1,0,0	1|0:0.991:0.27,0.47,0.26	0|0:0:1,0,0	1|1:1.416:0.088,0.408,0.504	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.387:0.166,0.282,0.553	1|0:1.192:0.177,0.454,0.369	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.026:0.196,0.582,0.222	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.019:0.244,0.493,0.263	1|1:2:0,0,1	1|1:1.487:0.057,0.398,0.545	1|1:1.506:0.013,0.467,0.519	0|0:0:1,0,0	1|1:1.646:0.008,0.338,0.654	0|0:0:1,0,0	1|1:1.962:0.001,0.035,0.963	0|0:0:1,0,0	0|1:1.013:0.292,0.404,0.304	0|1:0.961:0.272,0.495,0.233	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.229:0.258,0.256,0.487	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.124:0.88,0.116,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.066:0.249,0.436,0.315	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.075:0.231,0.464,0.305	0|0:0:1,0,0	1|1:1.555:0.048,0.349,0.603	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.179:0.827,0.167,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.152:0.859,0.131,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.917:0.262,0.559,0.179	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.657:0.047,0.249,0.704	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.967:0.001,0.03,0.969	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.856:0.002,0.141,0.858	1|1:1.619:0.063,0.254,0.683	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.205:0.159,0.477,0.364	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16882354	SNP-3.16881227.	A	G	.	PASS	AR2=0.959;DR2=0.966;AF=0.379	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1.167:0.174,0.485,0.341	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.471:0.071,0.386,0.543	1|1:1.389:0.094,0.422,0.483	1|1:2:0,0,1	1|1:1.412:0.088,0.412,0.5	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.057:0.22,0.504,0.277	1|0:1:0,1,0	0|1:1.189:0.166,0.48,0.355	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1.167:0.174,0.486,0.341	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.187:0.166,0.48,0.353	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.226:0.152,0.47,0.378	0|1:1:0,1,0	1|1:1.102:0.198,0.501,0.301	1|0:1.171:0.175,0.478,0.346	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1.187:0.166,0.48,0.353	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0
+3	16884674	SNP-3.16883547.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.433	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0.479:0.557,0.408,0.036	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.991:0,0.009,0.991	0|0:0:1,0,0
+3	16885632	SNP-3.16884505.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.438	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.224:0.79,0.196,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.054:0.946,0.054,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.019:0.981,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.17:0.836,0.157,0.006	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.218:0.794,0.194,0.012	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.202:0.808,0.183,0.01	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16887221	SNP-3.16886094.	C	A	.	PASS	AR2=0.975;DR2=0.98;AF=0.371	GT:DS:GP	1|1:1.825:0.013,0.149,0.838	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.699:0.013,0.275,0.712	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.746:0.008,0.238,0.754	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	1|1:1.735:0.018,0.23,0.753	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.715:0.019,0.247,0.734	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.945:0.004,0.048,0.949	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.412:0.101,0.386,0.513	1|1:1.849:0.003,0.146,0.851	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.885:0,0.115,0.885	0|0:0:1,0,0	1|1:1.793:0.01,0.186,0.804	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.914:0.002,0.083,0.916	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.834:0.01,0.146,0.844	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.955:0.001,0.042,0.956	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.757:0.016,0.211,0.773	1|1:1.855:0.009,0.127,0.864	1|1:1.755:0.005,0.234,0.76	1|1:1.835:0,0.164,0.836	1|1:1.841:0.009,0.141,0.85	1|1:2:0,0,1	1|1:1.78:0.01,0.2,0.79	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:1.812:0.012,0.164,0.824	1|1:1.528:0.059,0.355,0.587	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.644:0.055,0.245,0.7	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.951:0.002,0.045,0.953	1|1:2:0,0,1	1|1:1.883:0.009,0.1,0.891	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:1.721:0.002,0.275,0.723	1|1:1.965:0.001,0.032,0.967	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.949:0.002,0.048,0.95	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16887442	SNP-3.16886315.	A	G	.	PASS	AR2=0.946;DR2=0.963;AF=0.298	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.723:0.42,0.437,0.143	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0.646:0.455,0.445,0.101	1|0:0.665:0.446,0.443,0.111	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.774:0.377,0.472,0.151	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:0.779:0.375,0.471,0.154	0|1:1:0,1,0	0|0:0:1,0,0	0|1:0.599:0.484,0.434,0.082	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.03:0.97,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.092:0.908,0.092,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.75:0.4,0.45,0.15	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.673:0.441,0.446,0.114	1|0:0.866:0.311,0.513,0.177	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.708:0.416,0.461,0.124	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.659:0.45,0.441,0.109	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.642:0.462,0.434,0.104	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.779:0.381,0.46,0.16	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.657:0.451,0.44,0.108	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16887944	SNP-3.16886817.	C	A	.	PASS	AR2=1;DR2=1;AF=0.409	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16894190	SNP-3.16893063.	A	G	.	PASS	AR2=0.992;DR2=0.994;AF=0.53	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:1.861:0.008,0.123,0.869	1|1:1.977:0.001,0.022,0.977	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.966:0.001,0.033,0.966	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:1.485:0.179,0.157,0.664	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.941:0,0.058,0.941	1|1:1.959:0.002,0.037,0.961	1|1:1.955:0.001,0.044,0.955	1|1:1.904:0.001,0.094,0.905	1|1:1.976:0.001,0.023,0.976	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:1.987:0,0.012,0.988	1|1:2:0,0,1	0|0:0.458:0.542,0.458,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.977:0.001,0.022,0.978	1|1:2:0,0,1	1|1:1.957:0.002,0.039,0.959	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.006:0.014,0.966,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:1.977:0.001,0.022,0.977	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:1.977:0.001,0.022,0.977	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.016,0.984	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16894727	SNP-3.16893600.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.399	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.118:0.888,0.105,0.006	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.769:0.016,0.2,0.784	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.054:0.069,0.809,0.122	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.987:0,0.012,0.988	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16901615	SNP-3.16900488.	A	G	.	PASS	AR2=0.912;DR2=0.926;AF=0.245	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.381:0.677,0.266,0.058	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.405:0.09,0.414,0.495	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.915:0.297,0.492,0.211	0|0:0:1,0,0	1|0:0.979:0.262,0.497,0.241	1|1:2:0,0,1	1|1:0.998:0.252,0.499,0.249	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.221:0.145,0.489,0.366	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.263:0.76,0.217,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.382:0.629,0.36,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.933,0.066,0.001	0|0:0.253:0.795,0.158,0.047	0|0:0.053:0.948,0.051,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.97,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.934,0.064,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.1:0.903,0.093,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.958,0.041,0.001	0|0:0.622:0.466,0.445,0.089	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.071:0.931,0.068,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.31:0.079,0.533,0.388	1|0:0.828:0.307,0.558,0.135	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.683:0.437,0.444,0.12	0|0:0.786:0.357,0.5,0.143	0|0:0:1,0,0	0|0:0.093:0.917,0.072,0.011	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.072:0.93,0.068,0.002	0|0:0:1,0,0	0|0:0.104:0.898,0.1,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.078:0.924,0.074,0.002	0|0:0.212:0.791,0.205,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.155:0.193,0.459,0.348	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.184:0.825,0.166,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.106:0.897,0.1,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.242:0.765,0.229,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.162:0.846,0.146,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.038:0.229,0.504,0.267	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.298:0.727,0.249,0.025	0|0:0:1,0,0	1|1:1.052:0.223,0.503,0.275	1|1:2:0,0,1	0|0:0.956:0.274,0.497,0.229	0|0:0:1,0,0	0|0:0.209:0.793,0.205,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.088:0.914,0.084,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.083:0.919,0.079,0.002	1|1:2:0,0,1	0|0:0.69:0.411,0.489,0.101	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.166:0.168,0.498,0.334	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|0:0.718:0.431,0.419,0.149	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.015:0.243,0.5,0.257	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.251:0.018,0.713,0.269	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.041:0.959,0.04,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.167:0.839,0.156,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.987:0.257,0.498,0.244	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.145:0.865,0.125,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.083:0.92,0.078,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.851:0.001,0.147,0.852	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0
+3	16906662	SNP-3.16905535.	A	G	.	PASS	AR2=0.925;DR2=0.946;AF=0.409	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.6:0.045,0.31,0.645	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.662:0.029,0.28,0.691	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.6:0.047,0.307,0.646	1|1:2:0,0,1	1|1:1.425:0.079,0.416,0.504	1|1:1.618:0.036,0.309,0.655	0|0:0:1,0,0	1|0:0.901:0.332,0.435,0.233	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.558:0.049,0.343,0.607	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.476:0.07,0.384,0.546	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.579:0.045,0.332,0.624	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.569:0.047,0.338,0.616	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.558:0.037,0.367,0.595	1|1:2:0,0,1	0|1:1.326:0.125,0.425,0.45	1|0:1:0,1,0	1|1:1.674:0.028,0.27,0.702	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.162:0.846,0.147,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.062:0.939,0.06,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.961,0.039,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.52:0.054,0.373,0.573	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.609:0.039,0.313,0.648	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.563:0.048,0.341,0.611	1|1:1.614:0.034,0.317,0.648	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.308:0.121,0.45,0.429	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1.635:0.033,0.298,0.669	1|1:2:0,0,1	0|0:0.11:0.89,0.11,0	0|1:1.031:0.228,0.513,0.259	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.343:0.11,0.436,0.453	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.534:0.057,0.351,0.592	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.325:0.114,0.446,0.439	1|0:1.361:0.103,0.433,0.464	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.658:0.031,0.279,0.69	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.425:0.089,0.397,0.514	1|1:2:0,0,1	0|1:1.527:0.059,0.356,0.586	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.709:0.028,0.234,0.738	1|1:1.674:0.028,0.27,0.702	0|0:0:1,0,0	1|1:1.673:0.028,0.271,0.701	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.674:0.028,0.27,0.702	1|1:1.68:0.027,0.266,0.707	0|0:0:1,0,0	1|1:1.58:0.051,0.318,0.631	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16907231	SNP-3.16906104.	C	A	.	PASS	AR2=0.983;DR2=0.987;AF=0.386	GT:DS:GP	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.053:0.947,0.052,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.985:0,0.014,0.985	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.923:0.002,0.072,0.925	1|1:2:0,0,1	1|1:1.954:0.001,0.045,0.955	1|1:1.954:0.001,0.045,0.954	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.867:0.002,0.129,0.869	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.418:0.088,0.405,0.507	1|1:1.953:0.001,0.045,0.954	1|1:1.922:0.001,0.076,0.923	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.931:0,0.069,0.931	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.943:0.001,0.055,0.944	1|1:1.935:0.002,0.061,0.937	1|1:1.925:0.001,0.073,0.926	0|0:0.176:0.824,0.176,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.235:0.239,0.288,0.473	1|1:1.955:0,0.044,0.955	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.935:0.001,0.064,0.935	1|1:2:0,0,1	1|1:1.85:0.002,0.146,0.852	1|1:2:0,0,1	1|1:1.911:0.004,0.082,0.915	1|1:1.961:0.001,0.037,0.962	0|0:0:1,0,0	1|1:1.894:0.01,0.086,0.904	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.953:0.002,0.044,0.955	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.982:0,0.018,0.982	0|0:0:1,0,0	1|1:1.941:0.001,0.057,0.942	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.932:0.001,0.065,0.934	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.96:0.001,0.038,0.961	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.98:0,0.019,0.98	1|1:1.952:0,0.047,0.953	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:1.965:0.001,0.033,0.966	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.96:0.001,0.038,0.961	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.932:0,0.068,0.932	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16907925	SNP-3.16906798.	A	G	.	PASS	AR2=0.95;DR2=0.965;AF=0.515	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.811:0.4,0.388,0.211	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.84:0.008,0.144,0.848	0|0:0:1,0,0	1|1:1.744:0.024,0.207,0.768	1|1:1.696:0.016,0.271,0.712	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.83:0.007,0.155,0.838	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.683:0.025,0.268,0.707	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.902:0.001,0.096,0.903	1|1:2:0,0,1	1|1:1.792:0.016,0.175,0.808	1|1:2:0,0,1	1|1:1.506:0.085,0.324,0.591	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.904:0.006,0.083,0.911	1|1:2:0,0,1	1|0:1.615:0.05,0.285,0.665	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.748:0.03,0.191,0.778	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.613:0.03,0.328,0.642	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.17:0.83,0.17,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.601:0.49,0.42,0.09	0|0:0:1,0,0	1|0:0.459:0.545,0.45,0.004	1|1:1.481:0.059,0.401,0.54	0|0:0.106:0.898,0.098,0.004	0|0:0.172:0.837,0.155,0.008	0|0:0.38:0.648,0.325,0.027	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.985,0.015,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:1.721:0.01,0.259,0.731	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.016:0.984,0.016,0	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.94:0.002,0.056,0.942	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.349:0.108,0.436,0.456	1|1:2:0,0,1	1|1:1.869:0.004,0.122,0.874	1|1:1.698:0.02,0.262,0.718	1|1:2:0,0,1	1|1:1.93:0.002,0.066,0.932	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.83:0.008,0.153,0.839	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.816:0.014,0.157,0.83	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.329:0.114,0.443,0.443	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.842:0.005,0.147,0.847	1|1:2:0,0,1	1|1:1.782:0.01,0.198,0.792	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.685:0.025,0.266,0.709	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.629:0.033,0.304,0.662	0|0:0.021:0.979,0.021,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.824:0.011,0.155,0.835	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.764:0.016,0.203,0.78	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.848:0.006,0.139,0.855	1|1:2:0,0,1	1|1:1.896:0.004,0.095,0.9	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.967:0,0.032,0.967	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.931:0.003,0.063,0.934	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16908677	SNP-3.16907550.	C	A	.	PASS	AR2=0.984;DR2=0.988;AF=0.411	GT:DS:GP	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.818:0.009,0.165,0.827	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.931:0.001,0.066,0.932	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.683:0.359,0.6,0.042	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.702:0.016,0.266,0.718	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.398:0.089,0.425,0.486	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.68:0.028,0.263,0.708	1|1:1.859:0.002,0.138,0.861	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.836:0.004,0.156,0.84	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.048:0.953,0.046,0.001	1|1:1.969:0,0.031,0.969	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.958:0.001,0.039,0.959	0|0:0:1,0,0	1|1:1.825:0.004,0.167,0.829	1|0:0.829:0.32,0.531,0.149	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.863:0.006,0.125,0.869	1|1:1.937:0.001,0.062,0.938	1|1:1.861:0.001,0.137,0.862	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.892:0.003,0.102,0.895	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.968:0,0.032,0.968	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.939:0.003,0.056,0.941	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16908694	SNP-3.16907567.	A	G	.	PASS	AR2=0.973;DR2=0.978;AF=0.498	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.726:0.019,0.236,0.745	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.019:0.981,0.019,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.709:0.022,0.247,0.731	1|1:2:0,0,1	1|1:1.769:0.014,0.202,0.784	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.885:0.006,0.103,0.891	0|1:0.681:0.334,0.651,0.015	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.959:0.001,0.039,0.96	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0.001,0.03,0.969	1|1:1.819:0.016,0.149,0.835	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.962:0.001,0.036,0.963	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.958:0.001,0.04,0.959	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.732:0.019,0.23,0.751	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.923:0.077,0.923,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.691:0.038,0.234,0.729	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.797:0.011,0.18,0.809	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.709:0.022,0.247,0.731	1|0:1.704:0.023,0.251,0.727	1|1:1.964:0.001,0.034,0.965	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.896:0.003,0.098,0.899	1|1:1.833:0.009,0.15,0.841	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.815:0.011,0.163,0.826	1|1:1.773:0.014,0.198,0.787	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.776:0.014,0.195,0.79	1|1:2:0,0,1	1|1:1.816:0.018,0.149,0.834	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.709:0.022,0.247,0.731	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.771:0.013,0.203,0.784	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.831:0.009,0.151,0.84	1|1:2:0,0,1	1|1:1.826:0.01,0.155,0.836	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.754:0.015,0.216,0.769	1|1:2:0,0,1	1|1:1.809:0.011,0.168,0.821	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.93:0.002,0.066,0.932	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.789:0.014,0.183,0.803	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:1.846:0.002,0.149,0.848
+3	16911094	SNP-3.16909967.	C	A	.	PASS	AR2=0.995;DR2=0.997;AF=0.387	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.428:0.576,0.42,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.934:0,0.066,0.934	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.792:0.011,0.187,0.803	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.941:0.001,0.057,0.942	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.757:0.015,0.212,0.773	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16912862	SNP-3.16911735.	A	G	.	PASS	AR2=0.917;DR2=0.931;AF=0.359	GT:DS:GP	0|0:0.028:0.973,0.026,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.876:0.314,0.496,0.19	0|0:0.053:0.947,0.052,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.054:0.947,0.052,0.001	0|1:0.819:0.347,0.487,0.166	1|0:1.48:0.07,0.38,0.55	0|1:0.747:0.393,0.468,0.14	0|0:0:1,0,0	1|1:1.454:0.076,0.394,0.53	0|1:0.881:0.314,0.491,0.195	0|0:0:1,0,0	0|0:0.791:0.368,0.474,0.159	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.656:0.461,0.422,0.117	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.119:0.197,0.486,0.316	0|0:0:1,0,0	0|1:1.338:0.139,0.384,0.477	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.481:0.53,0.459,0.011	1|1:2:0,0,1	1|1:1.828:0.006,0.161,0.834	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.955:0.001,0.043,0.956	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.461:0.09,0.359,0.551	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.798:0.014,0.175,0.811	0|0:0:1,0,0	0|0:0.059:0.942,0.056,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.948,0.05,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.974,0.025,0.001	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.054:0.237,0.473,0.29	0|0:0:1,0,0	1|1:1.583:0.037,0.342,0.621	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.02,0	1|1:2:0,0,1	1|0:0.817:0.26,0.663,0.077	1|1:2:0,0,1	1|0:0.948:0.279,0.494,0.227	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.921:0.29,0.5,0.211	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.595:0.051,0.304,0.645	1|1:2:0,0,1	0|0:0.049:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0.026:0.974,0.025,0	0|0:0.812:0.352,0.484,0.164	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.025:0.975,0.025,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.039:0.237,0.487,0.276	1|1:1.972:0.001,0.027,0.972	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.703:0.401,0.494,0.105	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.777:0.375,0.472,0.153	0|1:0.748:0.392,0.467,0.141	0|1:0.843:0.336,0.485,0.179	0|0:0:1,0,0	0|0:0.563:0.539,0.359,0.102	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.929:0.002,0.067,0.931	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.858:0.007,0.129,0.864	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.932,0.068,0.001	0|0:0:1,0,0	0|0:0.102:0.899,0.1,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.751:0.393,0.464,0.144	1|1:2:0,0,1	1|1:1.938:0.002,0.058,0.94	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.789:0.367,0.476,0.156	1|1:2:0,0,1	0|0:0.691:0.434,0.442,0.125	0|0:0.767:0.382,0.468,0.15	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0.001,0.026,0.973	0|0:0:1,0,0	1|1:1.973:0.001,0.026,0.974	1|1:1.85:0.009,0.132,0.859	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.975:0,0.024,0.975	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.025:0.226,0.522,0.251	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.196:0.818,0.168,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16913768	SNP-3.16912641.	C	A	.	PASS	AR2=0.976;DR2=0.981;AF=0.331	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.662:0.023,0.293,0.684	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.923:0.252,0.573,0.175	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.867:0.292,0.549,0.159	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.71:0.022,0.247,0.731	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.866:0.007,0.121,0.872	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.416:0.046,0.491,0.463	1|1:2:0,0,1	1|1:1.97:0.001,0.028,0.971	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.965:0,0.035,0.965	1|1:2:0,0,1	1|1:1.699:0.001,0.299,0.7	0|0:0:1,0,0	1|0:1.186:0.11,0.594,0.296	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.813:0.003,0.181,0.816	1|1:1.598:0.022,0.358,0.62	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.974:0,0.025,0.974	1|1:1.966:0,0.033,0.967	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.938:0,0.061,0.938	1|1:1.845:0.009,0.138,0.853	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.968:0.001,0.03,0.969	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.886:0.007,0.1,0.893	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.727:0.018,0.237,0.745	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.144:0.864,0.128,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.205:0.814,0.167,0.019	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.234:0.781,0.205,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:1.953:0,0.047,0.953	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.882:0.009,0.1,0.891	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16913889	SNP-3.16912762.	C	A	.	PASS	AR2=0.918;DR2=0.943;AF=0.493	GT:DS:GP	1|1:1.907:0.003,0.086,0.911	1|1:2:0,0,1	1|1:1.802:0.024,0.149,0.827	0|0:0.584:0.625,0.165,0.209	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.643:0.584,0.189,0.227	1|1:1.593:0.042,0.323,0.635	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.554:0.518,0.409,0.072	1|1:2:0,0,1	0|0:0.437:0.612,0.339,0.049	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.359:0.096,0.449,0.455	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.255:0.149,0.446,0.404	0|0:0.605:0.487,0.421,0.092	0|0:0:1,0,0	0|1:0.433:0.617,0.333,0.05	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.15:0.231,0.388,0.381	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.264:0.751,0.235,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.883:0.316,0.485,0.199	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.36:0.677,0.286,0.037	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.272:0.764,0.201,0.035	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.456:0.59,0.363,0.047	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	0|0:0.095:0.908,0.089,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.763:0.006,0.224,0.77	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.958:0.002,0.038,0.96	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.807:0.008,0.177,0.815	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.91:0.001,0.088,0.911	1|1:1.951:0.001,0.047,0.952	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.967:0,0.032,0.967	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.943:0.362,0.334,0.305	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.489:0.566,0.378,0.056	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.452:0.601,0.345,0.053	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.024:0.159,0.658,0.183	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.235:0.777,0.21,0.013	0|0:0:1,0,0	1|1:1.877:0.006,0.112,0.882	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.831:0.01,0.148,0.842	0|0:0:1,0,0	1|1:1.683:0.025,0.266,0.709	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.417:0.622,0.339,0.039	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.412:0.617,0.355,0.029	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.591:0.497,0.415,0.088	1|1:2:0,0,1	0|0:0.412:0.633,0.321,0.046	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.642:0.062,0.235,0.703	0|0:0:1,0,0	0|0:0.506:0.535,0.424,0.041	1|0:0.877:0.272,0.578,0.149	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.962:0,0.038,0.962	1|1:2:0,0,1	1|1:1.787:0.025,0.164,0.811	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.483:0.576,0.365,0.059	0|0:0:1,0,0	0|0:0.483:0.576,0.365,0.059	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.175:0.833,0.159,0.008	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.926:0.003,0.069,0.929	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.006,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.979:0,0.021,0.979	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.264:0.175,0.386,0.439	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1
+3	16916409	SNP-3.16915282.	A	G	.	PASS	AR2=0.987;DR2=0.993;AF=0.239	GT:DS:GP	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.584:0.502,0.411,0.087	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.54:0.535,0.39,0.075	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.894:0,0.106,0.894	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.581:0.505,0.41,0.086	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16918539	SNP-3.16917412.	A	G	.	PASS	AR2=0.995;DR2=0.996;AF=0.432	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.919:0.002,0.077,0.921	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.016:0.985,0.015,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.934:0.001,0.063,0.936	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.896:0.004,0.097,0.9	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.67:0.018,0.295,0.687	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.918:0.002,0.078,0.92	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.922:0.002,0.074,0.924	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.846:0.012,0.13,0.858	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.897:0.003,0.097,0.9	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1
+3	16922757	SNP-3.16921630.	A	G	.	PASS	AR2=0.954;DR2=0.962;AF=0.481	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.61:0.037,0.317,0.646	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.989:0.222,0.568,0.211	0|1:1:0,1,0	1|0:1.064:0.207,0.522,0.271	1|1:1.885:0.003,0.11,0.887	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1.308:0.014,0.663,0.322	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.1:0.114,0.672,0.214	0|1:1:0,1,0	1|1:1.977:0,0.023,0.977	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.792:0.011,0.186,0.803	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.389:0.084,0.444,0.473	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.847:0.001,0.151,0.848	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:1.901:0.002,0.095,0.903	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.619:0.039,0.304,0.658	1|0:0.855:0.333,0.479,0.188	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.798:0.011,0.181,0.809	0|1:1:0,1,0	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.263:0.134,0.469,0.397	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.952:0.001,0.046,0.953	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.222:0.153,0.473,0.374	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.701:0.026,0.247,0.727	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.11:0.182,0.526,0.292	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.901:0.002,0.095,0.903	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.707:0.027,0.24,0.733	1|0:1:0,1,0	1|1:1.241:0.145,0.469,0.386	0|0:0:1,0,0	1|1:1.737:0.019,0.225,0.756	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.794:0.011,0.184,0.805	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.768:0.015,0.203,0.783	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.798:0.011,0.181,0.809	1|1:1.97:0.001,0.028,0.971	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.798:0.011,0.181,0.809	0|1:1:0,1,0	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:1.619:0.039,0.304,0.658	1|1:2:0,0,1	1|1:1.946:0.002,0.049,0.949	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.145:0.856,0.144,0	1|1:1.683:0.028,0.261,0.711	1|1:1.706:0.026,0.243,0.731	0|0:0:1,0,0	1|0:1:0,1,0
+3	16922834	SNP-3.16921707.	C	A	.	PASS	AR2=1;DR2=1;AF=0.401	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16925079	SNP-3.16923952.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.223	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.851:0.001,0.148,0.852	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.933:0.001,0.064,0.934	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16926996	SNP-3.16925869.	C	A	.	PASS	AR2=0.971;DR2=0.976;AF=0.318	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1.347:0.108,0.437,0.455	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.212:0.157,0.474,0.369	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1.179:0.148,0.525,0.327	1|1:2:0,0,1	0|1:1.198:0.166,0.471,0.363	1|0:1.159:0.167,0.507,0.326	1|1:2:0,0,1	1|1:1.956:0.002,0.039,0.959	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.887:0,0.112,0.887	1|1:1.907:0.003,0.086,0.91	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1.183:0.159,0.498,0.343	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.624:0.039,0.298,0.663	1|1:1.701:0.051,0.197,0.752	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.959:0,0.041,0.959	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.961:0,0.039,0.961	0|1:1.36:0.087,0.467,0.446	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.886:0.006,0.101,0.892	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.985:0,0.014,0.986	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.915:0.302,0.481,0.217	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16928902	SNP-3.16927775.	C	A	.	PASS	AR2=1;DR2=1;AF=0.403	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.016:0.984,0.016,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16931092	SNP-3.16929965.	C	A	.	PASS	AR2=0.955;DR2=0.966;AF=0.445	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:1.854:0.006,0.135,0.86	1|0:0.501:0.56,0.38,0.061	0|0:0.234:0.766,0.234,0	0|1:0.611:0.473,0.442,0.084	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.286:0.726,0.262,0.012	0|0:0.252:0.75,0.247,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.011,0	1|1:2:0,0,1	0|0:0.378:0.654,0.314,0.032	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.029:0.972,0.027,0.001	0|0:0.12:0.886,0.109,0.006	0|1:1:0,1,0	0|0:0.022:0.978,0.022,0	0|0:0.061:0.939,0.061,0	0|0:0:1,0,0	0|0:0.209:0.8,0.19,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.078:0.923,0.075,0.001	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.844:0.324,0.509,0.167	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.144:0.863,0.13,0.007	0|0:0.15:0.856,0.138,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.863:0.005,0.128,0.867	1|1:2:0,0,1	0|0:0.195:0.816,0.172,0.012	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.838:0.008,0.146,0.846	1|1:1.868:0.002,0.129,0.87	1|1:1.814:0.008,0.17,0.822	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.796:0.009,0.186,0.805	1|1:1.823:0.008,0.161,0.831	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.829:0.003,0.166,0.832	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.953:0.001,0.045,0.954	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.826:0.009,0.157,0.834	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.963:0,0.036,0.963	1|1:2:0,0,1	1|1:1.863:0.005,0.128,0.868	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.787:0.012,0.19,0.798	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.469:0.587,0.357,0.056	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.108:0.894,0.104,0.002	0|0:0.073:0.928,0.07,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.169:0.837,0.156,0.006	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.618:0.471,0.441,0.088	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.82:0.009,0.162,0.829	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.505:0.561,0.374,0.066	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.242:0.761,0.235,0.003	0|0:0:1,0,0	0|0:0.329:0.693,0.286,0.022	1|1:1.974:0,0.026,0.974	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.119:0.885,0.112,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.968,0.031,0	0|0:0.285:0.727,0.26,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.932,0.066,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.116:0.887,0.11,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.93:0.004,0.061,0.934	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.748:0.021,0.209,0.769	0|0:0:1,0,0	0|0:0.085:0.917,0.081,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16931262	SNP-3.16930135.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.418	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.972:0.001,0.027,0.973	1|1:1.911:0,0.089,0.911	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.936:0.001,0.063,0.937	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.823:0.038,0.1,0.862	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.012,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16936518	SNP-3.16935391.	A	G	.	PASS	AR2=0.988;DR2=0.989;AF=0.313	GT:DS:GP	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.789:0.01,0.192,0.799	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	0|0:0:1,0,0	1|1:1.885:0.001,0.113,0.886	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.049:0.951,0.048,0.001	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.893:0,0.106,0.893	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.712:0.023,0.241,0.735	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.063:0.938,0.061,0.001	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.862:0.008,0.122,0.87	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.823:0.016,0.146,0.838	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.037:0.964,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.082:0.919,0.08,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.099:0.904,0.094,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.23:0.779,0.213,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.088:0.914,0.084,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.93:0.003,0.064,0.933	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.848:0.006,0.14,0.854	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.795:0.01,0.185,0.805	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.97:0,0.029,0.97	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.876:0.001,0.121,0.877	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16936542	SNP-3.16935415.	A	G	.	PASS	AR2=0.983;DR2=0.991;AF=0.245	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.964:0.087,0.862,0.051	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.946,0.053,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.68:0.441,0.438,0.121	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.948:0.001,0.051,0.948	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.68:0.441,0.438,0.121	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.68:0.441,0.438,0.121	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16936990	SNP-3.16935863.	A	G	.	PASS	AR2=1;DR2=1;AF=0.237	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16941790	SNP-3.16940663.	A	G	.	PASS	AR2=1;DR2=1;AF=0.259	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16944235	SNP-3.16943108.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.551	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.14:0,0.86,0.14	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.957:0,0.043,0.957	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16945031	SNP-3.16943904.	C	A	.	PASS	AR2=0.988;DR2=0.991;AF=0.424	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.218:0.001,0.78,0.219	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.752:0.377,0.493,0.129	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.968,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.812:0.193,0.802,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.954,0.046,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.85:0.003,0.145,0.853	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.136:0.866,0.133,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.672:0.02,0.288,0.692	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.046:0.955,0.045,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.955,0.045,0	0|0:0.015:0.985,0.015,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.556:0.614,0.215,0.17	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.857:0,0.143,0.857	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.05:0.951,0.047,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16946305	SNP-3.16945178.	C	A	.	PASS	AR2=0.998;DR2=0.999;AF=0.459	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.926:0.002,0.069,0.929	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.199:0.801,0.199,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.027,0.973	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.966:0,0.033,0.966	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.959:0.001,0.04,0.96	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16946616	SNP-3.16945489.	C	A	.	PASS	AR2=0.997;DR2=0.997;AF=0.388	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.873:0.001,0.126,0.873	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.914:0.003,0.08,0.917	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.868:0.002,0.127,0.87	0|0:0:1,0,0	1|1:1.939:0,0.061,0.939	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.967:0.001,0.031,0.968	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.909:0.002,0.087,0.911	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.957:0.002,0.038,0.96	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.94:0.002,0.056,0.942	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16948390	SNP-3.16947263.	C	A	.	PASS	AR2=1;DR2=1;AF=0.399	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16957271	SNP-3.16956144.	A	G	.	PASS	AR2=0.983;DR2=0.987;AF=0.255	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.723:0.009,0.259,0.732	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.702:0.013,0.273,0.714	1|1:1.857:0.005,0.132,0.863	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.553:0.063,0.32,0.617	1|1:1.732:0.016,0.235,0.748	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.763:0.386,0.465,0.149	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.67:0.011,0.307,0.682	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.323:0.712,0.252,0.035	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16958073	SNP-3.16956946.	A	G	.	PASS	AR2=1;DR2=1;AF=0.44	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16958180	SNP-3.16957053.	A	G	.	PASS	AR2=1;DR2=1;AF=0.486	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16959242	SNP-3.16958115.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.373	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.992:0,0.007,0.993	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.984:0,0.016,0.984	0|0:0:1,0,0	0|0:0.009:0.991,0.008,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.724:0,0.276,0.724	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16964467	SNP-3.16963340.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.483	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.011:0,0.989,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.035,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.969,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.036:0.965,0.034,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	16965256	SNP-3.16964129.	C	A	.	PASS	AR2=0.987;DR2=0.99;AF=0.514	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.837:0.009,0.145,0.846	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.555:0.048,0.35,0.603	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.502:0.065,0.368,0.567	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.664:0.019,0.298,0.683	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.909:0.001,0.089,0.91	1|0:1:0,1,0	1|1:1.811:0.003,0.183,0.814	1|1:1.791:0.008,0.194,0.799	1|1:2:0,0,1	1|1:1.722:0.005,0.267,0.728	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.704:0.019,0.257,0.723	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.979:0,0.021,0.979	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.973:0,0.027,0.973	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.868:0.007,0.118,0.875	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.913:0.004,0.079,0.917	1|1:2:0,0,1	0|0:0:1,0,0
+3	16966085	SNP-3.16964958.	C	A	.	PASS	AR2=0.988;DR2=0.99;AF=0.333	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.119:0.881,0.118,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.145:0.226,0.404,0.37	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.078:0.922,0.077,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.82:0.005,0.17,0.825	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.862:0.005,0.128,0.867	1|1:2:0,0,1	1|1:1.921:0.001,0.076,0.922	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.845:0.005,0.144,0.85	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.004:0.996,0.004,0	0|0:0.15:0.852,0.146,0.002	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.981,0.019,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.888:0.007,0.099,0.894	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.615:0.012,0.361,0.627	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.603:0.416,0.565,0.019
+3	16966140	SNP-3.16965013.	A	G	.	PASS	AR2=0.875;DR2=0.91;AF=0.229	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.058:0.942,0.058,0	0|0:0.897:0.255,0.592,0.153	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.605:0.422,0.552,0.026	1|1:2:0,0,1	0|0:0.27:0.749,0.232,0.019	0|0:0:1,0,0	0|1:0.739:0.324,0.613,0.063	0|0:0.281:0.739,0.242,0.019	0|0:0:1,0,0	1|0:0.821:0.372,0.436,0.193	0|0:0:1,0,0	0|0:0.142:0.86,0.139,0.002	0|0:0.058:0.942,0.057,0	0|0:0.086:0.916,0.081,0.003	0|0:0.092:0.912,0.084,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.721:0.362,0.554,0.084	0|0:0.256:0.763,0.218,0.019	0|0:0:1,0,0	0|0:0.118:0.885,0.112,0.003	0|0:0.557:0.554,0.335,0.111	0|0:0.441:0.612,0.335,0.053	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.101:0.121,0.657,0.222	0|0:0:1,0,0	0|0:0.176:0.825,0.175,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.026,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.018,0.982	0|0:0.016:0.985,0.015,0	1|1:2:0,0,1	1|0:1.058:0.028,0.886,0.086	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.463:0.596,0.346,0.059	1|0:0.625:0.455,0.466,0.079	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.826:0.347,0.48,0.173	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.291:0.046,0.617,0.337	1|0:0.778:0.223,0.776,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.973,0.026,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.015:0.422,0.142,0.436	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.804:0.342,0.513,0.145	1|1:2:0,0,1	0|0:0.4:0.627,0.345,0.027	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.053:0.948,0.051,0.001	0|0:0.461:0.589,0.362,0.049	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.813:0.467,0.253,0.28	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0.018:0.983,0.017,0	0|0:0:1,0,0	0|1:0.881:0.229,0.66,0.11	1|1:1.734:0.058,0.15,0.792	0|0:0.065:0.939,0.058,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.188:0.823,0.166,0.011	0|0:0:1,0,0	0|0:0.506:0.494,0.506,0	0|0:0.048:0.952,0.048,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.081:0.923,0.074,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.498:0.549,0.404,0.047	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.999:0.248,0.505,0.247	0|0:0:1,0,0	1|1:1.744:0.018,0.22,0.762	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.089:0.913,0.085,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.444:0.081,0.395,0.525	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.365:0.171,0.293,0.536	1|1:2:0,0,1	0|0:0.037:0.963,0.036,0.001	0|0:0.902:0.427,0.244,0.329	0|0:0.085:0.918,0.078,0.003	0|0:0.104:0.9,0.096,0.004	0|0:0.085:0.918,0.078,0.003	0|0:0.395:0.643,0.319,0.038	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.179:0.829,0.163,0.008	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.637:0.105,0.153,0.742	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.943:0.002,0.054,0.944	0|0:0.038:0.963,0.036,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.343:0.707,0.242,0.05	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	16966275	SNP-3.16965148.	A	G	.	PASS	AR2=0.898;DR2=0.92;AF=0.363	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:1.958:0.001,0.041,0.959	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.056:0.945,0.054,0.001	0|0:0:1,0,0	0|0:1.126:0.189,0.496,0.315	0|0:0:1,0,0	0|0:0.105:0.896,0.102,0.001	1|0:1.244:0.142,0.473,0.386	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.559:0.571,0.298,0.131	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.298:0.128,0.446,0.426	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.294:0.73,0.245,0.025	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.639:0.518,0.325,0.157	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.775:0.015,0.195,0.79	1|1:2:0,0,1	1|1:1.861:0.004,0.132,0.865	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.957:0.28,0.482,0.238	1|1:1.634:0.039,0.289,0.672	1|1:1.632:0.039,0.291,0.671	0|1:1.294:0.072,0.562,0.366	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.583:0.046,0.324,0.63	1|1:2:0,0,1	1|0:1.218:0.15,0.482,0.368	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.843:0.031,0.096,0.874	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.498:0.061,0.38,0.559	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.13:0.875,0.12,0.005	1|1:2:0,0,1	0|0:0.967:0.272,0.489,0.239	1|1:1.877:0.006,0.111,0.883	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.634:0.039,0.287,0.673	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.941:0.002,0.055,0.943	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.712:0.44,0.408,0.152	0|0:0.09:0.91,0.09,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.104:0.896,0.104,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.749:0.36,0.531,0.109	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	1|1:1.845:0,0.155,0.845	1|1:1.559:0.05,0.342,0.609	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.48:0.059,0.402,0.539	0|0:0.019:0.981,0.019,0	1|1:1.624:0.04,0.297,0.664	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.214:0.809,0.169,0.022	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.182:0.201,0.415,0.384	0|0:0.24:0.819,0.123,0.058	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.482:0.061,0.396,0.543	1|1:1.532:0.054,0.36,0.586	0|0:0:1,0,0	1|1:1.939:0.003,0.055,0.942	1|1:1.941:0.002,0.055,0.943	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.75:0.401,0.448,0.151	0|1:1.079:0.206,0.509,0.285	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.137:0.869,0.126,0.006	0|1:1.195:0.16,0.485,0.355	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.276:0.11,0.505,0.386	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.095:0.908,0.09,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.176:0.831,0.162,0.007	0|0:0:1,0,0	0|0:0.048:0.953,0.046,0.001	1|1:1.485:0.077,0.362,0.561	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.986,0.014,0	1|1:1.607:0.041,0.311,0.648	1|1:1.734:0.011,0.243,0.746	0|1:1.285:0.127,0.461,0.412	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.141:0.189,0.481,0.33	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.209:0.801,0.188,0.011	0|0:0.164:0.84,0.155,0.005	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.649:0.039,0.274,0.688	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.872:0.318,0.492,0.19	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.687:0.444,0.424,0.131	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.195:0.145,0.515,0.34
+3	16967089	SNP-3.16965962.	C	A	.	PASS	AR2=1;DR2=1;AF=0.397	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16967136	SNP-3.16966009.	A	G	.	PASS	AR2=0.924;DR2=0.939;AF=0.248	GT:DS:GP	0|0:0.042:0.96,0.038,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.243:0.771,0.214,0.014	0|0:0.197:0.808,0.187,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.39:0.654,0.301,0.045	0|0:0:1,0,0	0|0:0.165:0.839,0.156,0.004	0|0:0.458:0.582,0.378,0.04	0|0:0.098:0.905,0.092,0.003	0|0:0.262:0.755,0.227,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.003:0.155,0.688,0.157	0|1:1:0,1,0	0|0:0.448:0.603,0.347,0.05	0|0:0:1,0,0	0|0:0.069:0.934,0.063,0.003	0|0:0.128:0.88,0.111,0.008	1|0:0.363:0.657,0.323,0.02	0|0:0.37:0.67,0.289,0.041	0|1:0.915:0.276,0.533,0.191	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	1|1:2:0,0,1	1|1:1.973:0,0.026,0.974	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.99:0,0.009,0.99	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.705:0.085,0.125,0.79	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0.046:0.956,0.041,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.219:0.791,0.198,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.286:0.734,0.245,0.021	1|0:1:0,1,0	0|0:0.224:0.787,0.202,0.011	0|0:0.27:0.748,0.234,0.018	0|0:0.277:0.742,0.238,0.019	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.142:0.864,0.129,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.601:0.057,0.285,0.658	0|0:0.19:0.819,0.172,0.009	1|1:2:0,0,1	0|0:0.137:0.866,0.13,0.003	0|0:0.254:0.762,0.223,0.016	0|0:0.065:0.935,0.064,0.001	0|0:0:1,0,0	0|0:0.155:0.847,0.151,0.002	0|0:0:1,0,0	0|0:0.06:0.942,0.056,0.002	0|0:0.125:0.877,0.121,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.969,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.122:0.882,0.114,0.004	0|0:0:1,0,0	0|0:0.144:0.856,0.144,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.266:0.756,0.221,0.022	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.531:0.518,0.433,0.049	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.089:0.911,0.088,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.132:0.014,0.84,0.146	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.382:0.651,0.315,0.034	0|0:0:1,0,0	1|0:1.032:0.119,0.73,0.151	1|1:2:0,0,1	0|0:0.335:0.69,0.285,0.025	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.582:0.512,0.394,0.094	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.151:0.107,0.636,0.258	0|0:0:1,0,0	0|0:0.449:0.602,0.348,0.051	1|1:2:0,0,1	0|0:0.083:0.922,0.074,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.129:0.874,0.124,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.913:0.005,0.077,0.918	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.008:0.152,0.689,0.159	0|0:0.063:0.942,0.053,0.005	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.81:0.04,0.111,0.85	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16968739	SNP-3.16967612.	C	A	.	PASS	AR2=0.984;DR2=0.988;AF=0.369	GT:DS:GP	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.835:0,0.165,0.835	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|0:0.96:0.04,0.96,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.965,0.033,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.795:0.011,0.184,0.806	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.563:0.048,0.341,0.611	0|1:1:0,1,0	1|1:1.542:0.024,0.409,0.566	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.807:0.194,0.805,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.711:0.019,0.25,0.73	0|0:0:1,0,0	1|1:1.749:0.009,0.232,0.758	1|0:1:0,1,0	1|1:1.913:0.002,0.082,0.915	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.819:0.009,0.163,0.828	1|1:2:0,0,1	1|1:1.895:0.004,0.097,0.899	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.676:0.027,0.271,0.703	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.964:0,0.035,0.965	0|0:0:1,0,0	1|1:1.923:0.003,0.07,0.927	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.861:0.001,0.136,0.862	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.743:0.013,0.231,0.756	0|0:0:1,0,0
+3	16972073	SNP-3.16970946.	A	G	.	PASS	AR2=0.947;DR2=0.962;AF=0.505	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.813:0.271,0.644,0.085	1|0:1.208:0.158,0.475,0.367	1|1:1.517:0.052,0.378,0.569	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.945:0.001,0.053,0.946	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.437:0.086,0.392,0.522	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.429:0.082,0.406,0.512	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.224:0.785,0.205,0.01	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.41:0.093,0.404,0.503	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.906:0.004,0.086,0.91	1|1:2:0,0,1	1|1:1.779:0.01,0.2,0.789	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.623:0.033,0.311,0.656	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1.383:0.103,0.411,0.486	1|1:2:0,0,1	1|1:1.998:0,0.001,0.999	1|1:1.823:0.012,0.153,0.835	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.854:0.004,0.137,0.859	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.873:0.138,0.851,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.005:0.194,0.608,0.199	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.962,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.608:0.032,0.327,0.64	0|0:0:1,0,0	1|1:1.897:0.004,0.095,0.901	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.572:0.044,0.339,0.617	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.904:0.002,0.091,0.906	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.858:0.364,0.414,0.222	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.751:0.023,0.203,0.774	1|1:1.951:0.001,0.048,0.952	1|1:2:0,0,1	1|1:1.576:0.044,0.336,0.62	1|1:1.922:0.001,0.075,0.924	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.988,0.012,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.834:0.016,0.134,0.85	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.915:0.001,0.082,0.916	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.975,0.025,0	1|1:2:0,0,1	1|1:1.447:0.068,0.417,0.515	1|1:1.608:0.043,0.305,0.652	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.107:0.901,0.092,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.769:0.481,0.27,0.249	0|0:0:1,0,0	1|0:0.425:0.609,0.356,0.034	1|1:2:0,0,1
+3	16972738	SNP-3.16971611.	C	A	.	PASS	AR2=0.991;DR2=0.993;AF=0.444	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.585:0.005,0.406,0.589	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.181:0.832,0.155,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.461:0.567,0.404,0.029	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0,0.025,0.975	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.312:0.724,0.239,0.037	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.195:0.816,0.172,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.084:0.919,0.079,0.003	0|0:0.217:0.793,0.196,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16975586	SNP-3.16974459.	A	G	.	PASS	AR2=0.96;DR2=0.971;AF=0.492	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1.594:0.042,0.323,0.636	1|1:2:0,0,1	1|1:1.623:0.039,0.3,0.662	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.597:0.042,0.319,0.639	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.964:0.001,0.034,0.965	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.444:0.104,0.348,0.548	1|1:1.922:0.001,0.076,0.923	1|1:2:0,0,1	1|1:1.735:0.021,0.222,0.757	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.835:0.008,0.149,0.843	0|0:0:1,0,0	1|1:1.628:0.036,0.3,0.664	0|0:0:1,0,0	1|1:1.556:0.044,0.357,0.6	1|1:2:0,0,1	1|1:1.765:0.017,0.201,0.782	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.479:0.061,0.399,0.54	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.74:0.018,0.224,0.758	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.589:0.038,0.336,0.626	0|1:1:0,1,0	1|1:1.639:0.05,0.261,0.689	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.665:0.033,0.27,0.698	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:1.188:0.196,0.42,0.384	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1.672:0.027,0.273,0.699	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.404:0.091,0.413,0.495	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1.455:0.073,0.398,0.529	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.837:0.007,0.149,0.844	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.87:0.007,0.115,0.877	1|1:1.879:0.005,0.112,0.884	0|0:0:1,0,0	1|1:2:0,0,1
+3	16976297	SNP-3.16975170.	A	G	.	PASS	AR2=0.926;DR2=0.941;AF=0.504	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.734:0.02,0.226,0.754	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.735:0.018,0.229,0.753	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.7:0.022,0.256,0.722	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.938:0.001,0.06,0.939	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:1.736:0.018,0.228,0.754	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.935:0.002,0.062,0.937	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.578:0.042,0.338,0.62	1|1:1.787:0.016,0.181,0.803	0|1:1.71:0.021,0.248,0.731	1|1:1.449:0.065,0.421,0.514	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.584:0.044,0.328,0.628	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.522:0.062,0.355,0.584	0|0:0:1,0,0	1|0:1.302:0.105,0.488,0.407	0|1:0.83:0.352,0.465,0.182	0|1:1.546:0.051,0.352,0.597	0|0:0:1,0,0	1|1:1.987:0,0.012,0.987	1|1:1.606:0.039,0.315,0.646	1|1:1.888:0.005,0.102,0.893	1|1:1.868:0.003,0.126,0.871	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.969:0,0.031,0.969	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.612:0.038,0.311,0.651	1|1:1.697:0.023,0.256,0.721	1|0:1.731:0.018,0.232,0.749	1|1:1.883:0.009,0.099,0.892	1|1:2:0,0,1	0|0:0:1,0,0	0|0:1.051:0.23,0.488,0.282	1|1:1.663:0.036,0.264,0.699	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.911:0.092,0.905,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.537:0.598,0.268,0.134	0|0:0:1,0,0	1|0:0.973:0.265,0.497,0.238	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.944:0.002,0.052,0.946	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.984:0,0.015,0.984	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.874:0.006,0.113,0.881	1|1:1.999:0,0.001,0.999	1|1:1.986:0,0.013,0.987	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.69:0.023,0.264,0.713	1|1:2:0,0,1	1|1:1.537:0.052,0.359,0.589	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.614:0.023,0.339,0.638	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.984:0,0.015,0.984	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.821:0.009,0.16,0.83	1|1:2:0,0,1	1|1:1.547:0.057,0.338,0.605	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.558:0.047,0.349,0.604	1|1:1.864:0.012,0.113,0.876	1|1:2:0,0,1	1|1:1.442:0.073,0.412,0.515	0|0:0:1,0,0	1|1:1.018:0.24,0.503,0.258	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.018,0.981	1|1:1.976:0,0.024,0.976	1|1:2:0,0,1	1|1:1.629:0.037,0.297,0.666	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.707:0.021,0.251,0.728	0|1:1.136:0.148,0.567,0.285	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.81:0.01,0.171,0.82	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.976:0,0.024,0.976	1|1:1.331:0.122,0.425,0.453	1|1:2:0,0,1	1|1:1.882:0.009,0.1,0.891	1|1:2:0,0,1	1|1:1.869:0.012,0.108,0.88	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.87:0.012,0.106,0.882	1|1:1.882:0.009,0.1,0.891	1|1:1.864:0.009,0.117,0.873	1|1:1.985:0,0.015,0.985	1|1:1.764:0.019,0.198,0.783	0|0:0:1,0,0	1|1:1.869:0.012,0.108,0.88	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.984:0,0.015,0.984	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.716:0.021,0.241,0.737	1|1:1.798:0.02,0.162,0.818	1|1:2:0,0,1	1|1:1.592:0.064,0.28,0.656	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	16976839	SNP-3.16975712.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.437	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.039:0.961,0.039,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.977:0,0.023,0.977	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.836:0.011,0.143,0.846	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.962:0,0.037,0.963	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16978308	SNP-3.16977181.	A	G	.	PASS	AR2=0.942;DR2=0.954;AF=0.383	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.541:0.061,0.338,0.601	0|0:0:1,0,0	1|1:1.613:0.038,0.31,0.651	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.667:0.028,0.277,0.695	0|0:0:1,0,0	1|1:1.713:0.021,0.245,0.734	1|1:2:0,0,1	1|1:1.675:0.027,0.272,0.701	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.619:0.037,0.307,0.656	0|0:0.067:0.939,0.056,0.006	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.621:0.036,0.306,0.657	1|1:1.861:0.005,0.129,0.866	1|1:2:0,0,1	1|1:1.854:0.006,0.135,0.86	1|1:1.706:0.023,0.249,0.728	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.865:0.006,0.123,0.871	0|0:0:1,0,0	1|1:1.926:0.002,0.071,0.928	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.574:0.048,0.33,0.622	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.835:0.006,0.153,0.841	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.577:0.05,0.324,0.626	1|1:1.269:0.15,0.431,0.419	1|1:1.795:0.012,0.18,0.807	1|1:1.705:0.024,0.247,0.729	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.912:0.005,0.077,0.917	0|1:1.503:0.053,0.39,0.556	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.964:0.066,0.903,0.03	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.688:0.027,0.258,0.715	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.861:0.005,0.129,0.866	1|1:1.674:0.027,0.271,0.702	1|1:2:0,0,1	1|1:1.976:0,0.023,0.977	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.699:0.025,0.25,0.725	0|0:0:1,0,0	1|0:1.226:0.154,0.466,0.38	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.604:0.033,0.331,0.636	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.694:0.025,0.256,0.719	1|1:1.69:0.023,0.264,0.713	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.715:0.02,0.246,0.734	1|1:2:0,0,1	1|1:1.676:0.029,0.267,0.705	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.348:0.092,0.468,0.44	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.547:0.06,0.334,0.606	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.979:0,0.02,0.98	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.207:0.188,0.418,0.395	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.226:0.154,0.466,0.38	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16978380	SNP-3.16977253.	A	G	.	PASS	AR2=0.882;DR2=0.911;AF=0.39	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.841:0.014,0.13,0.855	0|0:0:1,0,0	1|1:1.627:0.043,0.287,0.67	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.373:0.087,0.453,0.46	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.897:0.003,0.098,0.899	0|0:0:1,0,0	0|0:0.48:0.56,0.401,0.039	0|0:0:1,0,0	1|1:1.757:0.016,0.21,0.773	0|0:0:1,0,0	0|0:0.487:0.577,0.359,0.064	1|1:1.789:0.01,0.19,0.799	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.725:0.018,0.239,0.743	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.277:0.749,0.225,0.026	0|0:0:1,0,0	1|1:1.698:0.025,0.252,0.723	1|1:2:0,0,1	1|0:0.905:0.259,0.576,0.165	0|0:0:1,0,0	1|1:1.336:0.108,0.447,0.444	1|1:1.83:0.017,0.137,0.847	0|0:0:1,0,0	1|1:1.841:0.009,0.141,0.85	1|1:1.546:0.049,0.356,0.595	1|1:2:0,0,1	1|0:1.346:0.111,0.432,0.457	0|0:0:1,0,0	1|0:1.416:0.086,0.412,0.502	1|0:1.16:0.177,0.487,0.337	0|0:0:1,0,0	1|1:1.511:0.037,0.415,0.548	1|1:1.401:0.101,0.397,0.502	0|0:0:1,0,0	1|0:0.64:0.396,0.567,0.037	0|0:0:1,0,0	0|0:1.125:0.191,0.492,0.316	0|0:0.052:0.949,0.05,0.001	1|1:2:0,0,1	1|1:1.169:0.173,0.484,0.342	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.748:0.002,0.248,0.75	0|0:0.409:0.631,0.328,0.041	1|1:1.843:0.007,0.143,0.85	1|1:2:0,0,1	1|1:1.538:0.063,0.337,0.601	1|0:1.029:0.07,0.832,0.098	1|1:1.459:0.091,0.359,0.55	0|1:1.182:0.168,0.482,0.35	1|1:2:0,0,1	1|1:1.713:0.03,0.226,0.743	1|1:1.839:0.011,0.139,0.85	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.761:0.029,0.181,0.79	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.768:0.042,0.148,0.81	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.729:0.303,0.665,0.032	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.978:0.001,0.021,0.978	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.912:0.002,0.084,0.914	0|0:0.307:0.721,0.251,0.028	1|1:1.935:0.005,0.056,0.939	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.943:0.001,0.056,0.943	1|1:1.141:0.183,0.493,0.324	1|1:2:0,0,1	1|1:1.975:0.001,0.024,0.976	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.948:0.001,0.051,0.948	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.615:0.473,0.439,0.088	0|0:0.413:0.645,0.297,0.058	0|0:0.348:0.679,0.294,0.027	0|0:0:1,0,0	0|0:0.182:0.823,0.173,0.005	1|1:2:0,0,1	1|1:1.866:0.003,0.128,0.869	1|1:1.804:0.01,0.176,0.814	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.43:0.042,0.486,0.472	0|1:0.856:0.327,0.49,0.183	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.771:0.02,0.188,0.791	1|1:1.893:0.003,0.102,0.896	1|0:1.323:0.022,0.633,0.345	1|1:2:0,0,1	1|1:1.877:0.004,0.115,0.881	1|0:1.419:0.027,0.527,0.446	0|0:0.462:0.578,0.382,0.04	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.05:0.951,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.456:0.075,0.395,0.53	1|1:2:0,0,1	0|1:0.638:0.408,0.547,0.046	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.057:0.236,0.471,0.293	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.601:0.499,0.4,0.101	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.651:0.025,0.299,0.676	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.431:0.082,0.406,0.513	1|1:1.839:0.011,0.139,0.85	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.837:0.011,0.142,0.847	1|1:1.832:0.011,0.145,0.844	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.368:0.688,0.256,0.056	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.467:0.072,0.39,0.538	0|0:0:1,0,0	1|1:1.543:0.062,0.333,0.605	0|0:0:1,0,0	1|1:2:0,0,1
+3	16991576	SNP-3.16990449.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.363	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.027,0.973	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	1|1:1.949:0,0.051,0.949	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.956:0.001,0.043,0.957	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.96:0.001,0.039,0.961	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.922:0.001,0.076,0.923	1|1:2:0,0,1	1|1:1.928:0,0.071,0.928	1|1:2:0,0,1	1|1:1.979:0,0.021,0.979	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.919:0,0.081,0.919	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.956:0.001,0.043,0.957	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16993049	SNP-3.16991922.	C	A	.	PASS	AR2=0.989;DR2=0.991;AF=0.352	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.243:0.774,0.209,0.017	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.943:0.001,0.056,0.943	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.894:0.003,0.1,0.897	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.837:0.005,0.153,0.842	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.291:0.709,0.291,0	1|1:2:0,0,1	1|1:1.87:0.004,0.121,0.875	1|1:1.867:0.004,0.126,0.87	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.939:0.001,0.06,0.939	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.905:0.002,0.091,0.907	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.9:0.002,0.095,0.902	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.85:0.005,0.139,0.856	1|1:1.864:0.005,0.126,0.869	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.867:0.005,0.124,0.871	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.64:0.021,0.319,0.66	1|1:2:0,0,1	1|1:1.875:0.005,0.115,0.88	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16993369	SNP-3.16992242.	C	A	.	PASS	AR2=0.997;DR2=0.997;AF=0.359	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.652:0.025,0.298,0.677	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.876:0.003,0.118,0.879	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.926:0.001,0.072,0.927	1|1:2:0,0,1	1|1:1.86:0,0.139,0.861	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	16994927	SNP-3.16993800.	A	G	.	PASS	AR2=1;DR2=1;AF=0.453	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	16998202	SNP-3.16997075.	A	G	.	PASS	AR2=0.997;DR2=0.998;AF=0.483	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.99:0,0.009,0.99	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.974:0,0.025,0.975	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.029:0.971,0.029,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.398:0.605,0.393,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.808:0.01,0.171,0.818	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0,0.024,0.976	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17000857	SNP-3.16999730.	A	G	.	PASS	AR2=1;DR2=1;AF=0.27	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.018:0.024,0.933,0.042	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17003965	SNP-3.17002838.	A	G	.	PASS	AR2=0.905;DR2=0.915;AF=0.288	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.452:0.087,0.375,0.538	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.944:0.279,0.498,0.223	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.943:0.28,0.498,0.222	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|1:1.104:0.201,0.495,0.304	1|1:2:0,0,1	0|0:0.451:0.604,0.341,0.055	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.261:0.137,0.466,0.398	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.896:0.305,0.493,0.201	0|1:0.99:0.253,0.505,0.243	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.929:0.286,0.498,0.216	1|1:2:0,0,1	1|0:0.923:0.291,0.496,0.214	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.917:0.293,0.497,0.21	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.277:0.742,0.238,0.02	1|1:2:0,0,1	1|0:0.892:0.308,0.493,0.2	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.911:0.003,0.082,0.914	0|1:0.928:0.286,0.5,0.214	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.955,0.045,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.9:0.303,0.494,0.203	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.54:0.062,0.335,0.602	0|0:0.277:0.742,0.238,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.944:0.277,0.502,0.221	0|0:0.901:0.304,0.49,0.205	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.901:0.304,0.49,0.205	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.886:0.31,0.495,0.196	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.927:0.286,0.5,0.214	1|0:0.825:0.348,0.479,0.173	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.909:0.3,0.492,0.208	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.893:0.307,0.493,0.2	0|0:0:1,0,0	0|1:0.939:0.28,0.501,0.219	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.834:0.342,0.482,0.176	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.839:0.341,0.48,0.179	1|1:1.237:0.148,0.467,0.385	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.477:0.078,0.368,0.555	1|0:0.893:0.307,0.493,0.2	1|1:1.911:0.003,0.083,0.914	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.872:0.319,0.491,0.191	1|1:2:0,0,1	1|1:1.906:0.003,0.088,0.909	1|1:1.9:0.004,0.092,0.904	1|0:0.892:0.308,0.493,0.199	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0.25:0.802,0.146,0.052	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.356:0.121,0.402,0.477	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	17006312	SNP-3.17005185.	A	G	.	PASS	AR2=1;DR2=1;AF=0.309	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17006838	SNP-3.17005711.	A	G	.	PASS	AR2=0.901;DR2=0.928;AF=0.411	GT:DS:GP	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.933:0.313,0.44,0.246	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.71:0.021,0.247,0.732	1|0:1:0,1,0	1|1:1.721:0.02,0.24,0.74	0|0:0:1,0,0	0|1:1.504:0.062,0.372,0.566	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.758:0.016,0.21,0.774	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.83:0.008,0.154,0.838	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.717:0.006,0.271,0.723	1|1:2:0,0,1	1|0:1.467:0.072,0.389,0.539	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.468:0.588,0.357,0.055	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.431:0.616,0.337,0.047	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.261:0.769,0.201,0.03	0|0:0:1,0,0	1|0:0.429:0.618,0.336,0.046	0|0:0:1,0,0	0|0:0.431:0.616,0.337,0.047	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.431:0.616,0.337,0.047	0|0:0.4:0.642,0.315,0.043	1|1:2:0,0,1	0|0:0.4:0.642,0.315,0.043	1|0:0.468:0.588,0.357,0.055	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.398:0.644,0.314,0.042	1|0:1:0,1,0	1|1:1.467:0.072,0.389,0.539	0|0:0:1,0,0	0|0:0.431:0.616,0.337,0.047	1|1:1.467:0.072,0.389,0.539	1|1:1.467:0.072,0.389,0.539	1|1:1.995:0,0.005,0.995	0|1:1:0,1,0	0|0:0.4:0.642,0.315,0.043	0|0:0:1,0,0	0|0:0.296:0.734,0.235,0.03	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.4:0.642,0.315,0.043	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.432:0.615,0.338,0.047	0|0:0:1,0,0	0|0:0.396:0.646,0.313,0.042	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.468:0.588,0.357,0.055	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.816:0.009,0.166,0.825	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.214:0.814,0.158,0.028	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.704:0.012,0.272,0.716	0|0:0.398:0.644,0.314,0.042	0|0:0.468:0.588,0.357,0.055	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.467:0.072,0.389,0.539	1|1:1.872:0.005,0.119,0.876	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.723:0.02,0.238,0.743	1|1:1.715:0.02,0.246,0.735	1|1:2:0,0,1	1|1:1.723:0.02,0.238,0.743	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.596:0.042,0.321,0.638	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.432:0.615,0.338,0.047	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.693:0.026,0.254,0.72	1|1:2:0,0,1	1|1:1.752:0.016,0.216,0.768	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.432:0.615,0.338,0.047	1|1:1.985:0,0.015,0.985	0|0:0.468:0.588,0.357,0.055	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.431:0.616,0.337,0.047	0|0:0.269:0.761,0.209,0.03	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.213:0.815,0.157,0.028	1|1:1.959:0.001,0.04,0.96	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.901:0.004,0.091,0.905	0|0:0.4:0.642,0.315,0.043	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.4:0.642,0.315,0.043
+3	17006865	SNP-3.17005738.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.379	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.911:0.003,0.083,0.914	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.979:0,0.021,0.979	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:1.946:0.001,0.052,0.947	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	17006874	SNP-3.17005747.	A	G	.	PASS	AR2=1;DR2=1;AF=0.445	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.983:0,0.017,0.983	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	17011979	SNP-3.17010852.	C	A	.	PASS	AR2=0.97;DR2=0.98;AF=0.445	GT:DS:GP	1|1:1.955:0.002,0.04,0.957	1|1:1.326:0.116,0.441,0.443	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.327:0.116,0.441,0.443	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.278:0,0.722,0.278	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.66:0.019,0.301,0.68	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.492:0.043,0.422,0.535	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.735:0.021,0.222,0.757	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.446:0.029,0.496,0.475	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0,0.024,0.975	1|1:2:0,0,1	1|1:1.505:0.03,0.434,0.536	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.473:0.002,0.523,0.475	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.808:0.001,0.19,0.809	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.574:0.046,0.335,0.619	1|1:1.846:0.001,0.151,0.848	1|1:1.97:0,0.03,0.97	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.862:0.001,0.136,0.863	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:1.825:0.001,0.174,0.825	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.866:0.006,0.122,0.872	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.75:0.018,0.214,0.768	0|0:0:1,0,0	1|1:1.767:0.015,0.203,0.782	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.772:0.012,0.203,0.784	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.933:0.003,0.06,0.937	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.869:0.005,0.122,0.873	0|0:0:1,0,0	1|1:1.813:0.007,0.172,0.821	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0
+3	17012377	SNP-3.17011250.	C	A	.	PASS	AR2=0.974;DR2=0.98;AF=0.441	GT:DS:GP	1|1:1.889:0.008,0.096,0.896	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.727:0.02,0.233,0.747	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.965:0,0.035,0.965	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.962:0.038,0.962,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.582:0.036,0.346,0.618	1|1:2:0,0,1	1|1:1.359:0.061,0.518,0.42	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1.057:0.216,0.511,0.273	1|1:1.594:0.05,0.307,0.644	1|1:2:0,0,1	1|1:1.675:0.026,0.274,0.7	1|1:2:0,0,1	1|1:1.552:0.041,0.366,0.593	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.771:0.013,0.204,0.783	0|0:0:1,0,0	1|1:1.594:0.037,0.332,0.631	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.536:0.039,0.386,0.575	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1.094:0.081,0.743,0.176	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.773:0.022,0.184,0.795	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.765:0.016,0.202,0.782	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.965:0,0.035,0.965	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.546:0.034,0.386,0.58	1|1:2:0,0,1	1|1:1.965:0,0.035,0.965	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.782:0.008,0.202,0.79	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.767:0.013,0.207,0.78	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17013438	SNP-3.17012311.	C	A	.	PASS	AR2=1;DR2=1;AF=0.376	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.017:0.983,0.017,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17013512	SNP-3.17012385.	A	G	.	PASS	AR2=1;DR2=1;AF=0.337	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.061:0.94,0.058,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17013703	SNP-3.17012576.	C	A	.	PASS	AR2=0.981;DR2=0.986;AF=0.327	GT:DS:GP	1|1:2:0,0,1	0|0:0.039:0.962,0.037,0.001	0|0:0.039:0.962,0.037,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.962,0.037,0.001	0|1:1.12:0.144,0.593,0.263	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.814:0.01,0.166,0.824	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.494:0.039,0.429,0.533	0|0:0:1,0,0	0|0:0.628:0.496,0.381,0.123	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:1.111:0.192,0.505,0.303	1|1:1.745:0.008,0.238,0.754	1|1:2:0,0,1	0|1:1.653:0.005,0.338,0.657	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.661:0.027,0.285,0.688	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.965:0,0.035,0.965	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.847:0.004,0.145,0.851	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.039:0.962,0.037,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	17015006	SNP-3.17013879.	A	G	.	PASS	AR2=0.866;DR2=0.884;AF=0.298	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.884:0.293,0.53,0.177	0|0:0:1,0,0	0|0:0.788:0.371,0.471,0.159	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.81:0.354,0.482,0.164	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.806:0.356,0.481,0.163	0|0:0:1,0,0	0|0:0.374:0.663,0.3,0.037	0|1:0.919:0.293,0.496,0.212	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.921:0.003,0.074,0.923	1|1:1.921:0.003,0.074,0.923	0|0:0:1,0,0	0|0:0.791:0.368,0.474,0.159	0|1:0.791:0.368,0.474,0.159	0|0:0:1,0,0	0|0:0.791:0.368,0.474,0.159	1|0:0.791:0.368,0.474,0.159	0|0:0.791:0.368,0.473,0.159	0|1:1.252:0.154,0.441,0.406	1|1:1.742:0.028,0.202,0.77	0|0:0.121:0.894,0.091,0.015	0|0:0:1,0,0	1|0:0.791:0.368,0.474,0.159	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.791:0.368,0.474,0.159	0|0:0:1,0,0	1|0:0.791:0.368,0.474,0.159	0|1:1.295:0.109,0.486,0.404	0|0:0.791:0.368,0.474,0.159	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.791:0.368,0.474,0.159	1|1:1.524:0.049,0.378,0.573	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.921:0.003,0.074,0.923	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.791:0.368,0.474,0.159	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.791:0.368,0.474,0.159	0|0:0:1,0,0	1|0:0.791:0.368,0.474,0.159	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.856:0.325,0.494,0.181	1|1:2:0,0,1	0|1:0.863:0.324,0.488,0.188	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.056:0.192,0.56,0.248	1|1:2:0,0,1	0|0:0.398:0.643,0.315,0.042	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.806:0.357,0.481,0.163	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.368:0.668,0.295,0.036	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.379:0.111,0.4,0.489	0|0:0:1,0,0	0|1:0.791:0.368,0.474,0.159	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.266:0.125,0.485,0.39	0|0:0.859:0.326,0.488,0.186	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.937:0.285,0.494,0.222	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.791:0.368,0.474,0.159	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.791:0.368,0.474,0.159	1|1:1.921:0.003,0.074,0.923	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.753:0.39,0.466,0.144	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.791:0.368,0.474,0.159	1|1:2:0,0,1	0|0:0.791:0.368,0.474,0.159	0|1:1.243:0.146,0.465,0.389	0|0:0:1,0,0	0|1:1.262:0.136,0.466,0.398	1|1:2:0,0,1	1|1:1.327:0.119,0.435,0.446	0|1:1.337:0.117,0.429,0.454	1|1:2:0,0,1	0|0:0.791:0.368,0.474,0.159	1|1:1.612:0.046,0.297,0.657	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.608:0.046,0.299,0.655	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.74:0.398,0.463,0.139	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.302:0.126,0.446,0.428	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17019074	SNP-3.17017947.	A	G	.	PASS	AR2=0.938;DR2=0.953;AF=0.389	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.589:0.043,0.325,0.632	0|0:0:1,0,0	1|0:0.983:0.259,0.498,0.242	0|0:0:1,0,0	1|1:1.403:0.089,0.418,0.492	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.384:0.096,0.424,0.48	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.86:0.326,0.489,0.186	1|1:1.589:0.043,0.325,0.632	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.863:0.324,0.489,0.187	1|1:2:0,0,1	1|1:0.877:0.317,0.49,0.193	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.965:0,0.035,0.965	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.072:0.022,0.883,0.095	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.656:0.033,0.279,0.689	1|1:2:0,0,1	1|1:1.897:0.002,0.099,0.899	1|1:2:0,0,1	1|0:0.901:0.099,0.901,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.642:0.034,0.289,0.677	1|1:1.553:0.049,0.349,0.602	0|0:0:1,0,0	0|1:1.204:0.16,0.476,0.364	1|1:1.967:0.001,0.032,0.968	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.592:0.039,0.329,0.631	1|0:1.384:0.095,0.425,0.48	1|1:1.609:0.039,0.312,0.648	1|1:1.373:0.093,0.44,0.467	0|0:0:1,0,0	1|1:1.608:0.039,0.313,0.647	0|0:0:1,0,0	1|1:1.656:0.033,0.279,0.689	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.211:0.158,0.474,0.368	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.496:0.07,0.364,0.566	1|1:1.613:0.039,0.31,0.651	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.075:0.234,0.456,0.309	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.572:0.046,0.335,0.619	1|0:1.545:0.053,0.35,0.598	1|1:1.609:0.039,0.313,0.648	1|1:2:0,0,1	1|1:1.589:0.043,0.325,0.632	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.881:0.007,0.105,0.888	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.535:0.065,0.335,0.6	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17019476	SNP-3.17018349.	A	G	.	PASS	AR2=0.998;DR2=0.999;AF=0.481	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.485:0.575,0.365,0.06	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17020461	SNP-3.17019334.	C	A	.	PASS	AR2=1;DR2=1;AF=0.372	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.017:0.983,0.017,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17022129	SNP-3.17021002.	C	A	.	PASS	AR2=0.987;DR2=0.991;AF=0.297	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.81:0.316,0.559,0.126	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.849:0.006,0.139,0.855	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0.577:0.507,0.409,0.084	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.51:0.022,0.447,0.531	1|1:2:0,0,1	1|0:1.303:0.001,0.694,0.304	0|0:0:1,0,0	1|1:1.973:0,0.026,0.974	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.696:0.017,0.271,0.713	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.027,0.973	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.027,0.973	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.964:0.001,0.034,0.965	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.967:0,0.033,0.967	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	17023931	SNP-3.17022804.	A	G	.	PASS	AR2=0.947;DR2=0.965;AF=0.511	GT:DS:GP	1|1:2:0,0,1	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.97:0.001,0.029,0.971	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.75:0.018,0.214,0.768	1|1:1.524:0.057,0.362,0.581	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.573:0.046,0.335,0.619	1|0:1:0,1,0	1|1:1.481:0.065,0.389,0.546	1|1:2:0,0,1	1|1:1.363:0.166,0.304,0.53	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.282:0.114,0.489,0.397	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0.003:0.997,0.003,0	0|0:0.014:0.987,0.013,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1.573:0.046,0.335,0.619	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.573:0.046,0.335,0.619	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.573:0.046,0.335,0.619	0|0:0:1,0,0	1|1:1.584:0.043,0.329,0.628	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.574:0.046,0.335,0.619	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:1.583:0.035,0.348,0.618	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.401:0.092,0.414,0.493	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.574:0.046,0.335,0.62	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.573:0.046,0.335,0.619	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.977:0,0.022,0.977	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.574:0.046,0.335,0.619	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.007,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.993,0.007,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.403:0.092,0.413,0.495	0|1:1:0,1,0	1|1:1.421:0.086,0.407,0.507	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.409:0.09,0.412,0.498	1|0:1.408:0.09,0.412,0.498	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.981:0,0.018,0.981	0|0:0.009:0.991,0.009,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.573:0.046,0.335,0.619	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0
+3	17027034	SNP-3.17025907.	A	G	.	PASS	AR2=0.952;DR2=0.961;AF=0.33	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.812:0.009,0.17,0.821	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.216:0.062,0.66,0.278	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.832:0.008,0.152,0.84	1|1:1.825:0.008,0.159,0.833	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.089:0.913,0.084,0.003	0|0:0:1,0,0	0|0:0.317:0.708,0.267,0.025	1|1:2:0,0,1	0|0:0.318:0.708,0.267,0.025	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.318:0.708,0.267,0.025	0|0:0.29:0.731,0.247,0.022	0|0:0.318:0.708,0.267,0.025	1|0:1:0,1,0	0|0:0.318:0.708,0.267,0.025	1|0:1:0,1,0	0|0:0.318:0.708,0.267,0.025	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.505:0.013,0.469,0.518	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.156:0.852,0.141,0.008	0|0:0:1,0,0	0|0:0.087:0.915,0.082,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.914:0.098,0.889,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.978:0,0.022,0.978	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.981:0,0.019,0.981	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.318:0.708,0.267,0.025	0|0:0:1,0,0	0|0:0.318:0.708,0.267,0.025	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.809:0.009,0.172,0.819	1|1:1.838:0.008,0.146,0.846	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.835:0.008,0.149,0.843	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.109:0.894,0.103,0.003	0|0:0.157:0.85,0.143,0.007	1|1:1.832:0.008,0.152,0.84	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.827:0.008,0.157,0.835	1|1:1.827:0.008,0.157,0.835	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.791:0.01,0.188,0.801	1|1:1.815:0.009,0.167,0.824	1|1:1.792:0.01,0.187,0.802	1|1:2:0,0,1	1|1:1.829:0.008,0.155,0.837	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.817:0.009,0.166,0.826	1|1:2:0,0,1	0|0:0.318:0.708,0.267,0.025	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.82:0.008,0.163,0.829	1|1:1.831:0.008,0.153,0.839	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.832:0.008,0.152,0.84	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.832:0.008,0.152,0.84	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.09:0.912,0.086,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.905,0.093,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.744:0.043,0.17,0.787	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.318:0.708,0.267,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.318:0.708,0.267,0.025
+3	17032121	SNP-3.17030994.	A	G	.	PASS	AR2=0.802;DR2=0.868;AF=0.405	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.403:0.089,0.419,0.492	0|1:1.41:0.087,0.416,0.497	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.41:0.087,0.416,0.497	0|0:0:1,0,0	0|1:1.41:0.087,0.416,0.497	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.41:0.087,0.416,0.497	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.41:0.087,0.416,0.497	1|1:2:0,0,1	1|1:1.41:0.087,0.416,0.497	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.36:0.102,0.437,0.462	1|1:1.41:0.087,0.416,0.497	1|1:2:0,0,1	1|1:1.406:0.088,0.417,0.494	0|1:1.076:0.255,0.414,0.331	1|1:2:0,0,1	1|1:1.88:0.001,0.118,0.881	1|0:0.928:0.289,0.493,0.218	0|1:0.77:0.371,0.488,0.141	1|0:0.857:0.329,0.485,0.186	1|1:1.952:0,0.047,0.952	1|1:2:0,0,1	0|0:0.602:0.49,0.418,0.092	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.602:0.49,0.418,0.092	0|0:0.603:0.489,0.419,0.092	1|1:1.868:0.004,0.123,0.872	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.602:0.49,0.418,0.092	1|1:2:0,0,1	0|0:0.641:0.464,0.432,0.104	0|0:0.603:0.489,0.419,0.092	0|0:0:1,0,0	1|0:0.602:0.49,0.418,0.092	1|1:1.834:0.003,0.161,0.836	1|0:0.602:0.49,0.418,0.092	1|1:2:0,0,1	0|1:1.006:0.251,0.493,0.256	0|0:0:1,0,0	0|0:0.746:0.386,0.481,0.132	1|1:2:0,0,1	0|0:0.602:0.49,0.418,0.092	1|1:1.928:0.001,0.07,0.929	1|1:2:0,0,1	1|1:1.522:0.037,0.405,0.559	0|1:0.602:0.49,0.418,0.092	0|0:0:1,0,0	0|1:0.854:0.33,0.485,0.185	1|1:1.992:0,0.008,0.992	0|1:0.602:0.49,0.418,0.092	0|0:0.602:0.49,0.418,0.092	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.854:0.33,0.485,0.185	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.97,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.049:0.952,0.048,0.001	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.364:0.72,0.196,0.084	0|0:0:1,0,0	0|0:0.602:0.49,0.418,0.092	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.067:0.934,0.066,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.602:0.49,0.418,0.092	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.311:0.732,0.225,0.043	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.602:0.49,0.419,0.092	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.409:0.087,0.416,0.497	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.602:0.49,0.418,0.092	0|0:0:1,0,0	1|1:1.091:0.286,0.338,0.377	1|1:1.875:0,0.125,0.875	0|1:0.852:0.332,0.484,0.184	1|0:1.408:0.088,0.417,0.496	0|0:0:1,0,0	0|0:0.411:0.632,0.325,0.043	0|0:0:1,0,0	1|1:1.406:0.088,0.417,0.495	1|1:1.406:0.088,0.417,0.495	1|1:2:0,0,1	1|1:1.41:0.087,0.416,0.497	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.407:0.088,0.417,0.495	0|1:1.36:0.102,0.437,0.462	1|1:2:0,0,1	0|1:0.784:0.374,0.469,0.158	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.602:0.49,0.418,0.092	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:1.404:0.089,0.418,0.493	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.409:0.087,0.416,0.496	1|1:1.36:0.102,0.437,0.462	0|0:0:1,0,0	0|1:1.408:0.088,0.417,0.495	1|1:1.954:0.003,0.041,0.957	0|0:0.72:0.404,0.472,0.124	0|0:0.602:0.49,0.418,0.092	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.854:0.33,0.485,0.185	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.41:0.087,0.416,0.497	1|1:2:0,0,1	1|1:1.41:0.087,0.416,0.497	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.41:0.087,0.416,0.497	1|1:2:0,0,1	0|1:1.41:0.087,0.416,0.497	1|1:2:0,0,1	0|1:1.389:0.093,0.424,0.482	1|1:1.999:0,0.001,0.999	0|0:0.602:0.49,0.418,0.092	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.602:0.49,0.418,0.092	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.41:0.087,0.416,0.497	0|0:0.015:0.985,0.015,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.602:0.49,0.418,0.092
+3	17032918	SNP-3.17031791.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.345	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.967:0.001,0.032,0.968	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.027,0.972	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0.022:0.978,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.021,0	0|0:0.022:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.021,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0.021:0.979,0.02,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17034429	SNP-3.17033302.	A	G	.	PASS	AR2=0.973;DR2=0.98;AF=0.381	GT:DS:GP	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.466:0.04,0.454,0.506	0|0:0:1,0,0	1|0:0.494:0.517,0.471,0.012	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.725:0.398,0.48,0.122	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.581:0.001,0.418,0.582	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.992:0.008,0.992,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.923,0.075,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.12:0.881,0.117,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.109:0.906,0.079,0.015	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.238:0.776,0.21,0.014	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.014:0.986,0.014,0	0|0:0.139:0.866,0.129,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.138:0.867,0.127,0.005	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.932,0.067,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.181:0.832,0.155,0.013	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.343:0.685,0.287,0.028	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.264:0.754,0.229,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.546:0.544,0.365,0.09	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.26:0.757,0.226,0.017	0|0:0.259:0.758,0.225,0.017	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.942,0.057,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.981,0.019,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.085:0.92,0.075,0.005	1|1:1.766:0.013,0.209,0.779	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17035092	SNP-3.17033965.	C	A	.	PASS	AR2=0.989;DR2=0.993;AF=0.316	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.947,0.051,0.001	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.515:0.013,0.46,0.527	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.541:0.01,0.438,0.552	0|0:0:1,0,0	1|1:1.788:0.008,0.195,0.796	0|1:1:0,1,0	1|1:1.796:0.009,0.186,0.805	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.964:0.001,0.035,0.964	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.954:0,0.045,0.954	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.084:0.019,0.877,0.104	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.498:0.02,0.462,0.518	0|0:0:1,0,0
+3	17035251	SNP-3.17034124.	C	A	.	PASS	AR2=0.988;DR2=0.991;AF=0.404	GT:DS:GP	0|0:0:1,0,0	0|0:0.438:0.578,0.406,0.016	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.095:0.908,0.09,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.086:0.916,0.082,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.449:0.552,0.447,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.086:0.916,0.082,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.086:0.916,0.082,0.002	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.121:0.882,0.114,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.458:0.626,0.29,0.084	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.252:0.78,0.189,0.032	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.122:0.882,0.114,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.086:0.916,0.082,0.002	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.086:0.916,0.082,0.002	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.122:0.882,0.114,0.004	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17035826	SNP-3.17034699.	A	G	.	PASS	AR2=0.968;DR2=0.975;AF=0.224	GT:DS:GP	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.448:0.573,0.406,0.021	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.104:0.899,0.098,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.655:0.03,0.285,0.685	0|1:1.141:0.125,0.609,0.266	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.684:0.025,0.267,0.708	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.655:0.03,0.285,0.685	1|1:2:0,0,1	1|1:1.655:0.03,0.285,0.685	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.961,0.039,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.847:0.168,0.817,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.684:0.025,0.267,0.708	0|0:0:1,0,0	0|0:0.039:0.961,0.039,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.656:0.03,0.284,0.686	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.659:0.029,0.282,0.688	1|1:2:0,0,1	0|0:0.039:0.961,0.039,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.655:0.03,0.285,0.685	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.655:0.03,0.285,0.685	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.712:0.023,0.241,0.736	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17035928	SNP-3.17034801.	A	G	.	PASS	AR2=0.995;DR2=0.997;AF=0.257	GT:DS:GP	0|0:0:1,0,0	1|0:0.579:0.421,0.578,0.001	0|0:0.426:0.576,0.422,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.081:0.919,0.08,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.994:0.018,0.969,0.013	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17036502	SNP-3.17035375.	C	A	.	PASS	AR2=0.988;DR2=0.99;AF=0.36	GT:DS:GP	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.294:0.728,0.249,0.022	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.784:0.388,0.439,0.173	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.58:0.047,0.325,0.627	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.789:0.005,0.2,0.794	1|1:1.826:0.002,0.17,0.828	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.283:0.719,0.278,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.719:0.415,0.45,0.134	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17036731	SNP-3.17035604.	A	G	.	PASS	AR2=0.886;DR2=0.896;AF=0.267	GT:DS:GP	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1.072:0.262,0.404,0.334	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:0.834:0.34,0.486,0.174	1|0:1:0,1,0	0|1:1:0,1,0	1|0:0.834:0.34,0.486,0.174	0|0:0.834:0.34,0.486,0.174	0|0:0:1,0,0	0|1:0.834:0.34,0.486,0.174	0|1:1:0,1,0	0|1:0.834:0.34,0.486,0.174	0|0:0:1,0,0	0|1:0.864:0.322,0.491,0.186	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.415:0.604,0.377,0.019	0|0:0.834:0.34,0.486,0.174	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0.834:0.34,0.486,0.174	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:0.834:0.34,0.486,0.174	1|1:2:0,0,1	1|1:1.894:0,0.106,0.894	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.834:0.34,0.486,0.174	1|0:0.834:0.34,0.486,0.174	0|0:0.834:0.34,0.486,0.174	1|0:0.834:0.34,0.486,0.174	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:0.834:0.34,0.486,0.174	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:0.834:0.34,0.486,0.174	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.698:0.418,0.466,0.116	0|1:0.753:0.404,0.439,0.157	1|0:0.834:0.34,0.486,0.174	0|1:0.834:0.34,0.486,0.174	0|0:0.836:0.339,0.486,0.175	0|1:0.834:0.34,0.486,0.174	0|1:0.834:0.34,0.486,0.174	1|0:0.834:0.34,0.486,0.174	0|1:0.834:0.34,0.486,0.174	1|0:0.836:0.339,0.486,0.175	0|0:0:1,0,0	0|0:0.834:0.34,0.486,0.174	0|0:0.834:0.34,0.486,0.174	0|1:0.814:0.352,0.483,0.165	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.436:0.567,0.429,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.834:0.34,0.486,0.174	0|0:0:1,0,0	0|0:0.663:0.474,0.388,0.137	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	17037461	SNP-3.17036334.	A	G	.	PASS	AR2=0.991;DR2=0.995;AF=0.321	GT:DS:GP	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.547:0.032,0.39,0.579	1|1:1.539:0.03,0.4,0.57	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.985:0,0.015,0.985	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.679:0.446,0.43,0.125	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17039258	SNP-3.17038131.	C	A	.	PASS	AR2=1;DR2=1;AF=0.35	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.001:0.999,0.001,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17041239	SNP-3.17040112.	C	A	.	PASS	AR2=0.992;DR2=0.996;AF=0.363	GT:DS:GP	0|0:0:1,0,0	0|0:0.615:0.487,0.412,0.101	1|1:1.482:0.022,0.473,0.505	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.707:0.052,0.189,0.759	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17046414	SNP-3.17045287.	A	G	.	PASS	AR2=0.943;DR2=0.955;AF=0.398	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.795:0.014,0.178,0.809	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.691:0.024,0.26,0.715	1|1:1.71:0.021,0.248,0.731	1|1:2:0,0,1	1|1:1.71:0.021,0.248,0.731	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.542:0.046,0.367,0.587	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.71:0.021,0.248,0.731	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.71:0.021,0.248,0.731	1|1:1.71:0.021,0.248,0.731	1|1:1.71:0.021,0.248,0.731	1|1:1.71:0.021,0.248,0.731	1|1:1.713:0.021,0.246,0.734	1|1:1.715:0.021,0.244,0.735	1|1:1.727:0.019,0.235,0.746	1|1:1.712:0.021,0.246,0.733	1|1:1.695:0.023,0.259,0.718	0|0:0:1,0,0	0|0:0.069:0.932,0.068,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.988:0,0.011,0.988	0|0:0.374:0.665,0.296,0.039	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.994:0.007,0.991,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.981:0,0.018,0.982	1|1:2:0,0,1	1|1:1.257:0.321,0.1,0.579	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.988:0,0.011,0.988	0|0:0.409:0.637,0.317,0.046	1|1:2:0,0,1	1|1:1.647:0.006,0.34,0.653	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.02:0.005,0.969,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.968:0.001,0.031,0.968	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.704:0.022,0.252,0.726	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.71:0.021,0.248,0.731	0|0:0:1,0,0	1|1:1.71:0.021,0.248,0.731	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.71:0.021,0.248,0.731	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.71:0.021,0.248,0.731	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.71:0.021,0.248,0.731	1|1:1.71:0.021,0.248,0.731	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.976:0,0.023,0.976	0|0:0:1,0,0	1|1:1.978:0,0.022,0.978	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.71:0.021,0.248,0.731	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.696:0.023,0.258,0.719	1|1:2:0,0,1	1|1:1.711:0.021,0.247,0.732	1|1:1.71:0.021,0.248,0.731	0|0:0:1,0,0	1|1:1.81:0.001,0.189,0.811	1|1:1.98:0,0.02,0.98	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.71:0.021,0.248,0.731	1|1:1.71:0.021,0.248,0.731	0|0:0:1,0,0	1|1:1.713:0.021,0.246,0.734	1|1:1.656:0.029,0.286,0.685	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.761:0.018,0.204,0.779	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.979:0,0.021,0.979	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.368:0.67,0.293,0.038	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.752:0.019,0.209,0.772	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986
+3	17056800	SNP-3.17055613ct.	A	G	.	PASS	AR2=0.901;DR2=0.923;AF=0.398	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.93:0.001,0.067,0.932	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.074:0.239,0.449,0.312	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.801:0.01,0.179,0.811	1|1:1.801:0.01,0.179,0.811	1|1:1.801:0.01,0.179,0.811	1|1:2:0,0,1	1|1:1.801:0.01,0.179,0.811	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.589:0.481,0.449,0.07	1|1:2:0,0,1	1|1:1.801:0.01,0.179,0.811	1|1:1.801:0.01,0.179,0.811	0|0:0:1,0,0	1|1:1.801:0.01,0.179,0.811	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.801:0.01,0.179,0.811	1|1:2:0,0,1	1|1:1.801:0.01,0.179,0.811	0|0:0:1,0,0	1|1:1.803:0.01,0.177,0.813	1|1:1.809:0.01,0.171,0.819	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.298:0.718,0.265,0.016	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.968,0.032,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.628:0.461,0.451,0.088	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.457:0.558,0.427,0.015	0|0:0:1,0,0	0|0:0.291:0.73,0.249,0.021	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.226:0.787,0.201,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.74:0.406,0.448,0.146	0|0:0.615:0.553,0.278,0.168	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.067:0.934,0.064,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.786:0.37,0.474,0.156	0|0:0.164:0.84,0.156,0.004	0|0:0:1,0,0	0|0:0.374:0.657,0.313,0.03	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.564:0.508,0.42,0.072	0|0:0.616:0.469,0.446,0.085	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.398:0.654,0.295,0.051	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.038:0.091,0.781,0.129	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.289:0.732,0.248,0.02	0|0:0.333:0.693,0.28,0.027	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.591:0.497,0.416,0.088	0|0:0:1,0,0	0|0:0.588:0.494,0.424,0.082	0|0:0.439:0.612,0.337,0.051	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.407:0.636,0.32,0.044	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.161:0.844,0.152,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.256:0.763,0.218,0.019	0|0:0:1,0,0	0|0:0.652:0.418,0.511,0.071	0|0:0.171:0.853,0.123,0.024	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.303:0.721,0.255,0.024	1|1:2:0,0,1	1|1:1.801:0.01,0.179,0.811	1|1:1.801:0.01,0.179,0.811	1|1:1.801:0.01,0.179,0.811	0|1:0.786:0.37,0.474,0.156	1|1:2:0,0,1	1|1:1.801:0.01,0.179,0.811	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.324:0.703,0.271,0.026	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.042:0.959,0.041,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.801:0.01,0.179,0.811	1|1:1.655:0.02,0.305,0.675	1|1:1.801:0.01,0.179,0.811	1|1:1.801:0.01,0.179,0.811	0|0:0:1,0,0	1|1:1.801:0.01,0.179,0.811	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.801:0.01,0.179,0.811	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.784:0.012,0.192,0.796	1|1:2:0,0,1	1|1:1.801:0.01,0.178,0.811	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.552:0.534,0.379,0.087	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.801:0.01,0.179,0.811	1|1:2:0,0,1	1|1:1.802:0.01,0.178,0.812	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.801:0.01,0.179,0.811	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.801:0.01,0.179,0.811	1|1:1.801:0.01,0.179,0.811	1|1:1.801:0.01,0.179,0.811	1|1:1.8:0.011,0.179,0.811	0|1:0.786:0.398,0.418,0.184	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.322:0.704,0.27,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.786:0.37,0.474,0.156	0|0:0:1,0,0	0|0:0.071:0.931,0.067,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.013,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.801:0.01,0.179,0.811	0|0:0:1,0,0	1|1:1.847:0.008,0.137,0.855	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.081:0.922,0.075,0.003	0|0:0:1,0,0	0|0:0:1,0,0
+3	17057151	SNP-3.17055964.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.275	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.689:0.023,0.265,0.712	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.821:0.008,0.164,0.828	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.682:0.024,0.271,0.705	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17057230	SNP-3.17056043.	C	A	.	PASS	AR2=0.951;DR2=0.964;AF=0.433	GT:DS:GP	0|0:0:1,0,0	0|1:1.491:0.073,0.363,0.564	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.994:0.006,0.994,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.304:0.72,0.257,0.024	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.364:0.67,0.296,0.034	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.715:0.418,0.45,0.132	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.651:0.428,0.493,0.079	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.1:0.902,0.097,0.001	0|0:0:1,0,0	0|0:0.502:0.556,0.386,0.058	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.057:0.944,0.055,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.052:0.949,0.05,0.001	0|0:0.043:0.957,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.952,0.047,0.001	0|0:0:1,0,0	0|0:0.375:0.685,0.255,0.06	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.934:0.001,0.064,0.935	1|1:2:0,0,1	1|1:1.891:0.004,0.102,0.895	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.904:0.002,0.091,0.906	1|1:2:0,0,1	0|1:0.904:0.222,0.651,0.127	1|1:2:0,0,1	1|1:1.903:0.002,0.094,0.905	1|1:1.853:0.005,0.138,0.858	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.057:0.945,0.053,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.958:0.001,0.04,0.959	1|1:2:0,0,1	1|1:1.536:0.056,0.351,0.592	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.535:0.057,0.352,0.592	1|1:2:0,0,1	1|1:1.445:0.114,0.327,0.559	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.794:0.355,0.497,0.149	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.682:0.438,0.442,0.12	0|0:0:1,0,0	0|0:0.082:0.92,0.078,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.461:0.074,0.392,0.535	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.053:0.948,0.051,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.461:0.556,0.427,0.017	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.079:0.923,0.075,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.321:0.723,0.232,0.045	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.635:0.468,0.429,0.103	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.27:0.749,0.233,0.018	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.313:0.713,0.262,0.026	0|0:0.123:0.881,0.115,0.004	0|0:0.081:0.921,0.077,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.293:0.728,0.25,0.022	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.041:0.959,0.04,0	0|0:0.306:0.717,0.26,0.023	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17059410	SNP-3.17058223.	C	A	.	PASS	AR2=1;DR2=1;AF=0.325	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.916:0.003,0.079,0.918	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17061585	SNP-3.17060398.	A	G	.	PASS	AR2=0.925;DR2=0.94;AF=0.444	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.489:0.088,0.335,0.577	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.022:0.243,0.491,0.266	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.12:0.197,0.487,0.317	0|1:1.255:0.135,0.475,0.39	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.835:0.336,0.493,0.171	0|1:0.95:0.268,0.515,0.218	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.671:0.029,0.27,0.7	1|1:1.679:0.027,0.268,0.705	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.772:0.012,0.203,0.785	1|1:1.511:0.083,0.324,0.593	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.734:0.018,0.23,0.752	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	0|1:0.856:0.144,0.856,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.729:0.018,0.235,0.747	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.767:0.014,0.205,0.781	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.426:0.063,0.447,0.489	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.298:0.759,0.185,0.056	0|0:0:1,0,0	1|1:1.681:0.025,0.268,0.707	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.189:0.824,0.164,0.013	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.757:0.015,0.213,0.772	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.463:0.026,0.485,0.489	0|0:0.001:0.999,0.001,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1.021:0.244,0.491,0.265	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.784:0.012,0.192,0.796	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.052:0.233,0.482,0.285	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0.937:0.288,0.488,0.225	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.724:0.019,0.238,0.743	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.073:0.216,0.495,0.289	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.768:0.014,0.204,0.782	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.665:0.031,0.272,0.697	1|1:1.34:0.104,0.453,0.443	1|1:1.282:0.161,0.395,0.443	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.484:0.052,0.412,0.536	1|1:2:0,0,1	1|1:1.697:0.024,0.254,0.722	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.804:0.015,0.166,0.819	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.772:0.013,0.201,0.786	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.771:0.013,0.203,0.784	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.187:0.826,0.161,0.013	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.64:0.041,0.278,0.681	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17062268	SNP-3.17061081.	C	A	.	PASS	AR2=0.984;DR2=0.987;AF=0.335	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.858:0.005,0.133,0.862	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.974:0.001,0.024,0.975	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.953:0.001,0.046,0.954	1|1:1.958:0.001,0.04,0.959	1|1:1.96:0.001,0.039,0.961	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.951:0.001,0.048,0.952	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.932:0.001,0.065,0.933	1|1:1.799:0.004,0.193,0.803	0|0:0.017:0.983,0.017,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.952:0.001,0.046,0.953	0|0:0:1,0,0	1|1:1.847:0.004,0.145,0.851	0|0:0:1,0,0	1|1:1.815:0.003,0.178,0.819	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.947:0.001,0.051,0.948	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.953:0.001,0.045,0.954	1|1:1.925:0.002,0.071,0.927	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.973:0,0.026,0.973	1|1:1.947:0.001,0.052,0.948	1|1:1.973:0.001,0.026,0.974	1|1:1.952:0,0.047,0.952	1|1:2:0,0,1	1|1:1.937:0.001,0.06,0.939	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.963:0.001,0.036,0.964	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.969:0,0.03,0.97	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.952:0.001,0.047,0.952	1|1:1.956:0,0.043,0.957	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.906:0.001,0.092,0.907	0|0:0:1,0,0	1|1:1.928:0.001,0.07,0.929	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.946:0.001,0.052,0.947	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.697:0.033,0.236,0.73	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.951:0.001,0.048,0.951	1|1:1.977:0.001,0.022,0.977	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.704:0.527,0.243,0.231	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.922:0.001,0.077,0.923	0|0:0:1,0,0	1|1:1.96:0.001,0.039,0.961	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.949:0.001,0.049,0.95	1|1:1.964:0.001,0.035,0.965	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.971:0.001,0.028,0.971	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.942:0.001,0.056,0.943	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17064370	SNP-3.17063183.	C	A	.	PASS	AR2=0.991;DR2=0.992;AF=0.316	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.906:0.094,0.906,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.955:0.001,0.044,0.955	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.856:0.006,0.132,0.862	1|1:2:0,0,1	1|1:1.802:0.009,0.179,0.811	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.945:0.001,0.053,0.946	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.813:0.01,0.167,0.823	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.949:0.001,0.049,0.95	1|1:1.825:0.008,0.158,0.833	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.889:0.003,0.104,0.893	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.883:0.003,0.11,0.886	1|1:1.857:0.007,0.128,0.865	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.909:0.002,0.087,0.911	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.802:0.024,0.149,0.827	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.912:0.003,0.083,0.914	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.951:0.001,0.047,0.952	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.932:0.001,0.065,0.934	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17064446	SNP-3.17063259.	C	A	.	PASS	AR2=0.989;DR2=0.991;AF=0.326	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.688:0.016,0.28,0.704	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.79:0.213,0.784,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.725:0.006,0.262,0.731	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.747:0.008,0.236,0.755	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.867:0.005,0.124,0.872	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.873:0.006,0.115,0.879	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.962:0.001,0.036,0.963	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.904:0.003,0.091,0.907	1|1:1.937:0.001,0.06,0.939	1|1:2:0,0,1	1|1:1.912:0.002,0.083,0.914	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.929:0.002,0.068,0.93	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.846:0.001,0.153,0.847	1|1:1.997:0,0.003,0.997	1|1:1.946:0.001,0.052,0.947	1|1:1.948:0.001,0.05,0.949	1|1:1.956:0,0.044,0.956	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.811:0.024,0.142,0.835	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:1.95:0.001,0.047,0.952	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.947:0.002,0.049,0.949	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.974:0,0.026,0.974	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17064447	SNP-3.17063260.	C	A	.	PASS	AR2=0.934;DR2=0.948;AF=0.269	GT:DS:GP	0|0:0:1,0,0	0|0:0.247:0.771,0.211,0.018	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.017:0.22,0.543,0.237	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.78:0.012,0.196,0.792	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.202:0.803,0.193,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.408:0.08,0.431,0.489	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.777:0.012,0.199,0.789	1|1:1.464:0.065,0.406,0.529	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.703:0.025,0.247,0.728	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.645:0.036,0.282,0.682	1|1:1.729:0.018,0.235,0.747	0|0:0:1,0,0	1|0:1.215:0.091,0.603,0.306	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.39:0.095,0.421,0.484	0|0:0:1,0,0	1|1:1.75:0.015,0.221,0.765	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.387:0.097,0.419,0.484	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.726:0.023,0.227,0.75	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.943:0.276,0.505,0.219	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.675:0.027,0.272,0.701	1|1:2:0,0,1	1|0:1.198:0.093,0.617,0.291	1|1:1.719:0.021,0.24,0.739	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.756:0.018,0.209,0.774	0|0:0:1,0,0	1|1:1.707:0.02,0.253,0.727	1|1:1.572:0.037,0.355,0.608	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.954,0.045,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.299:0.122,0.456,0.421	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.052:0.949,0.051,0.001	0|0:0:1,0,0	0|0:0.039:0.961,0.039,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.488:0.568,0.376,0.056	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.608:0.03,0.332,0.638	1|1:1.829:0.009,0.153,0.838	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.622:0.035,0.307,0.658	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.723:0.021,0.236,0.743	0|0:0:1,0,0	1|1:1.665:0.039,0.256,0.704	1|0:1.73:0.019,0.233,0.749	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.956:0.002,0.04,0.958	1|1:2:0,0,1	1|1:1.754:0.016,0.213,0.771	1|1:1.737:0.019,0.224,0.756	1|1:2:0,0,1	1|1:1.801:0.014,0.172,0.815	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17064676	SNP-3.17063489.	C	A	.	PASS	AR2=0.942;DR2=0.957;AF=0.279	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.828:0.009,0.155,0.837	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.12:0.182,0.515,0.303	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.502:0.056,0.387,0.558	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.814:0.012,0.163,0.825	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.516:0.056,0.373,0.571	1|1:1.934:0.001,0.063,0.936	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.852:0.006,0.136,0.858	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.745:0.02,0.215,0.765	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.924:0.239,0.597,0.163	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.486:0.061,0.393,0.547	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.536:0.539,0.386,0.075	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.493:0.062,0.382,0.555	1|1:2:0,0,1	0|0:0.502:0.576,0.346,0.078	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.853:0.005,0.136,0.859	1|1:1.87:0.006,0.119,0.876	0|0:0:1,0,0	0|0:0.439:0.622,0.317,0.061	1|1:1.869:0.003,0.124,0.872	1|1:1.741:0.018,0.224,0.759	1|1:1.842:0.006,0.146,0.848	1|0:1:0,1,0	1|1:1.737:0.013,0.236,0.75	0|0:0:1,0,0	0|0:0.694:0.456,0.395,0.149	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.433:0.117,0.332,0.55	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.432:0.074,0.42,0.506	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.789:0.01,0.191,0.799	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.818:0.008,0.165,0.827	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.845:0.006,0.143,0.851	1|1:1.753:0.013,0.221,0.766	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.798:0.014,0.174,0.812	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.836:0.006,0.152,0.842	1|1:2:0,0,1	1|1:1.717:0.036,0.211,0.753	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.82:0.013,0.153,0.833	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.867:0.005,0.124,0.872	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.894:0.003,0.101,0.897	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17064954	SNP-3.17063767.	C	A	.	PASS	AR2=0.992;DR2=0.993;AF=0.323	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.863:0.004,0.129,0.867	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.923:0.001,0.074,0.925	1|1:1.943:0.001,0.055,0.944	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.278:0.771,0.18,0.049	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.902:0.002,0.094,0.904	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.867:0.005,0.124,0.871	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.829:0.008,0.155,0.837	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.972:0,0.028,0.972	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.943:0.001,0.056,0.944	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.849:0.005,0.142,0.854	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.837:0.005,0.153,0.842	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.913:0.001,0.085,0.914	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.957:0.001,0.041,0.958	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.965:0.001,0.033,0.966	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17065946	SNP-3.17064759.	C	A	.	PASS	AR2=0.889;DR2=0.914;AF=0.37	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.795:0.012,0.181,0.807	1|1:1.821:0.008,0.163,0.829	0|1:1.221:0.153,0.473,0.374	1|1:1.57:0.044,0.341,0.615	0|0:0:1,0,0	1|1:1.594:0.035,0.336,0.629	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.1:0.9,0.1,0	1|0:0.987:0.254,0.505,0.241	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.465:0.049,0.437,0.514	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.149:0.112,0.627,0.261	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.497:0.054,0.395,0.551	0|0:0.498:0.562,0.378,0.06	1|1:2:0,0,1	1|0:1.384:0.096,0.425,0.48	0|0:0.647:0.468,0.418,0.115	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.01:0.248,0.494,0.258	1|1:1.002:0.242,0.514,0.244	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.359:0.641,0.359,0	1|0:0.927:0.292,0.489,0.219	1|0:0.929:0.291,0.489,0.22	0|0:0:1,0,0	1|0:1.277:0.24,0.243,0.517	0|0:0:1,0,0	0|1:1.076:0.216,0.492,0.292	0|1:0.862:0.324,0.489,0.187	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.593:0.468,0.472,0.061	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.21:0.178,0.433,0.388	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.871:0.322,0.484,0.194	0|0:0:1,0,0	1|1:1.841:0.012,0.134,0.854	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.845:0.324,0.507,0.169	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0.672:0.445,0.438,0.117	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.49:0.041,0.428,0.531	1|1:2:0,0,1	0|0:0.858:0.328,0.485,0.186	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.02:0.98,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.94:0.002,0.057,0.941	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.504:0.034,0.428,0.538	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.91:0.301,0.489,0.211	1|1:1.697:0.023,0.258,0.719	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.443:0.079,0.4,0.521	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.798:0.011,0.179,0.81	1|1:1.765:0.015,0.204,0.781	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.849:0.331,0.49,0.18	1|0:0.93:0.292,0.486,0.222	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:1.581:0.038,0.344,0.618	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.847:0.335,0.483,0.182	1|1:1.626:0.036,0.302,0.662	0|0:0.922:0.295,0.488,0.217	0|0:0.659:0.46,0.422,0.119	0|0:0:1,0,0	0|0:0.662:0.457,0.424,0.119	1|1:2:0,0,1	1|1:1.588:0.044,0.324,0.632	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.833:0.013,0.141,0.846	1|1:1.701:0.026,0.246,0.728	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.603:0.04,0.316,0.643	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.298:0.127,0.448,0.425	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.581:0.044,0.331,0.625	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17066399	SNP-3.17065212.	A	G	.	PASS	AR2=0.974;DR2=0.978;AF=0.511	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.896:0.003,0.097,0.899	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.836:0.006,0.151,0.843	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.67:0.035,0.261,0.704	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.784:0.011,0.194,0.795	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.8:0.011,0.179,0.811	1|1:1.77:0.013,0.204,0.783	0|0:0:1,0,0	1|1:1.805:0.01,0.174,0.816	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.798:0.011,0.179,0.809	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.678:0.024,0.274,0.702	1|1:1.805:0.01,0.174,0.816	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.824:0.01,0.156,0.834	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.746:0.017,0.219,0.763	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.885:0.004,0.106,0.89	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.93:0.001,0.067,0.931	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.894:0.003,0.099,0.898	1|1:1.905:0.003,0.088,0.908	1|0:1:0,1,0	1|1:1.634:0.039,0.288,0.673	1|1:1.901:0.003,0.093,0.904	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.79:0.009,0.192,0.799	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.92:0.002,0.076,0.922	1|1:2:0,0,1	1|1:1.887:0.004,0.106,0.89	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.837:0.007,0.149,0.844	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.669:0.036,0.259,0.705	1|1:1.735:0.02,0.226,0.755	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.849:0.006,0.139,0.855	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.897:0.003,0.097,0.9	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.796:0.011,0.181,0.808	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.801:0.011,0.178,0.811	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.833:0.007,0.153,0.84	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.831:0.007,0.155,0.838	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.982:0,0.017,0.982	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17067493	SNP-3.17066306.	C	A	.	PASS	AR2=0.995;DR2=0.996;AF=0.415	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.908:0.004,0.084,0.912	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.63:0.052,0.265,0.682	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.057:0.944,0.056,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.587:0.106,0.201,0.693	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17069149	SNP-3.17067962.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.313	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.937:0.063,0.937,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.885:0.004,0.107,0.889	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17073834	SNP-3.17072647.	A	G	.	PASS	AR2=0.996;DR2=0.996;AF=0.262	GT:DS:GP	0|0:0.185:0.836,0.143,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.939:0.001,0.059,0.94	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.121:0.88,0.118,0.002	0|0:0.297:0.734,0.236,0.031	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.939:0.001,0.059,0.94	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17074874	SNP-3.17073687.	C	A	.	PASS	AR2=0.992;DR2=0.993;AF=0.424	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.208:0.821,0.15,0.029	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.095:0.114,0.676,0.21	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.897:0.009,0.084,0.907	1|0:0.999:0.001,0.999,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.469:0.619,0.294,0.088	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.962:0.001,0.036,0.963	0|0:0:1,0,0	1|1:1.659:0.007,0.326,0.667	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:1.999:0,0.001,0.999	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.902:0,0.098,0.902	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.849:0.016,0.12,0.865	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17076813	SNP-3.17075626.	C	A	.	PASS	AR2=0.989;DR2=0.991;AF=0.3	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.048:0.053,0.846,0.101	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.78:0.262,0.696,0.042	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.7:0.008,0.284,0.708	0|1:0.815:0.233,0.718,0.048	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.965:0,0.034,0.965	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.976:0,0.024,0.976	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.947:0,0.052,0.947	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.9:0.003,0.095,0.902	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.578:0.012,0.398,0.59	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.812:0.012,0.163,0.825	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.76:0.025,0.191,0.784	0|0:0:1,0,0
+3	17079019	SNP-3.17077832.	A	G	.	PASS	AR2=1;DR2=1;AF=0.302	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17080712	SNP-3.17079525.	A	G	.	PASS	AR2=1;DR2=1;AF=0.311	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.032:0.968,0.032,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.039:0.962,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.969,0.031,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17080998	SNP-3.17079811.	A	G	.	PASS	AR2=0.89;DR2=0.928;AF=0.419	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.975:0,0.025,0.975	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.983:0,0.017,0.983	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:1.983:0,0.016,0.983	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.626:0.473,0.428,0.099	0|0:0:1,0,0	0|0:0.301:0.723,0.253,0.024	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.639:0.463,0.434,0.103	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.67:0.442,0.446,0.112	0|0:0.412:0.61,0.368,0.022	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.682:0.435,0.449,0.116	1|0:0.634:0.467,0.433,0.1	0|0:0.601:0.49,0.419,0.091	1|1:2:0,0,1	0|0:0.671:0.443,0.443,0.114	1|0:0.615:0.48,0.424,0.095	1|0:1:0,1,0	0|0:0.479:0.589,0.342,0.069	0|0:0.741:0.398,0.462,0.139	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.609:0.486,0.419,0.095	0|1:0.649:0.456,0.438,0.106	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.107:0.896,0.101,0.003	0|0:0:1,0,0	0|0:0.632:0.467,0.434,0.099	0|0:0:1,0,0	0|1:0.656:0.452,0.44,0.108	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.072:0.93,0.069,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.631:0.469,0.43,0.1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.611:0.484,0.42,0.096	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.614:0.481,0.424,0.095	0|0:0:1,0,0	0|0:0.747:0.395,0.464,0.141	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:0.684:0.433,0.449,0.117	1|1:2:0,0,1	0|0:0.074:0.928,0.071,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.969:0,0.03,0.969	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.198:0.811,0.18,0.009	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:0.551:0.527,0.394,0.079	0|0:0.68:0.436,0.448,0.116	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.142:0.865,0.127,0.008	0|0:0.646:0.46,0.435,0.105	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.496:0.578,0.349,0.074	0|0:0.711:0.416,0.457,0.127	0|0:0.183:0.826,0.165,0.009	1|0:0.673:0.44,0.446,0.114	0|1:0.637:0.465,0.433,0.102	0|1:0.658:0.45,0.441,0.109	1|0:0.666:0.446,0.441,0.112	1|0:0.746:0.396,0.463,0.141	0|0:0.201:0.809,0.181,0.01	0|0:0.112:0.892,0.105,0.003	0|0:0:1,0,0	0|0:0.657:0.451,0.441,0.108	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.072:0.93,0.069,0.002	1|1:2:0,0,1	0|0:0.201:0.809,0.18,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.607:0.487,0.418,0.094	0|0:0.215:0.797,0.192,0.012	0|0:0.107:0.896,0.101,0.003	0|0:0:1,0,0	1|0:1:0,1,0
+3	17082728	SNP-3.17081541.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.336	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.917:0.002,0.079,0.919	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.913:0.002,0.083,0.915	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.918:0.002,0.079,0.92	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17083355	SNP-3.17082168.	A	G	.	PASS	AR2=0.997;DR2=0.998;AF=0.303	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.683:0.435,0.448,0.118	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17084496	SNP-3.17083309.	A	G	.	PASS	AR2=0.875;DR2=0.902;AF=0.278	GT:DS:GP	0|0:0.264:0.753,0.23,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.246:0.145,0.465,0.39	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.187:0.165,0.482,0.352	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.361:0.104,0.431,0.465	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.255:0.141,0.464,0.395	1|1:2:0,0,1	0|1:1.369:0.106,0.418,0.475	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.265:0.137,0.462,0.401	1|1:1.414:0.086,0.414,0.5	1|1:1.567:0.063,0.307,0.63	0|0:0:1,0,0	1|1:1.226:0.146,0.483,0.372	0|1:1.229:0.145,0.482,0.373	0|0:0:1,0,0	0|1:1.236:0.15,0.465,0.385	1|1:2:0,0,1	0|1:1.246:0.145,0.465,0.39	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.531:0.477,0.515,0.008	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.195:0.812,0.181,0.007	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.173:0.836,0.155,0.009	0|0:0:1,0,0	0|0:0.11:0.893,0.104,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.423:0.639,0.299,0.062	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.043:0.958,0.041,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.153:0.853,0.142,0.006	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.653:0.05,0.247,0.703	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.139:0.866,0.128,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.104:0.898,0.1,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.112:0.89,0.107,0.002	0|0:0.026:0.974,0.025,0	0|0:0.148:0.854,0.144,0.002	0|0:0.176:0.826,0.171,0.003	0|0:0:1,0,0	0|0:0.103:0.899,0.099,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.151:0.849,0.15,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.377:0.654,0.316,0.031	0|0:0.16:0.843,0.155,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.036:0.965,0.034,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.317:0.118,0.447,0.435	0|0:0:1,0,0	1|1:1.331:0.108,0.453,0.439	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.259:0.14,0.462,0.399	0|0:0:1,0,0	0|1:1.322:0.115,0.448,0.437	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.05:0.951,0.048,0.001	1|0:1.305:0.088,0.52,0.392	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.222:0.15,0.479,0.372	1|1:2:0,0,1	0|1:1.364:0.087,0.462,0.451	1|1:1.236:0.148,0.468,0.384	0|1:1.22:0.156,0.468,0.376	1|1:1.335:0.106,0.452,0.441	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.123:0.879,0.119,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.344:0.109,0.439,0.453	0|1:1.178:0.169,0.483,0.347	0|0:0:1,0,0	0|1:1.195:0.155,0.494,0.35	1|1:1.215:0.153,0.479,0.368	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.05:0.951,0.049,0.001	0|0:0:1,0,0	0|0:0.254:0.763,0.22,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.658:0.05,0.243,0.707	1|1:1.278:0.13,0.461,0.408	0|0:0:1,0,0	1|0:1.269:0.134,0.463,0.403	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.387:0.095,0.424,0.481	1|1:2:0,0,1	1|1:1.61:0.053,0.284,0.663	1|1:1.399:0.086,0.429,0.485	1|0:1.282:0.102,0.515,0.383	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.124:0.881,0.114,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	17084825	SNP-3.17083638.	A	G	.	PASS	AR2=1;DR2=1;AF=0.249	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17085178	SNP-3.17083991.	A	G	.	PASS	AR2=0.993;DR2=0.995;AF=0.277	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.933,0.066,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.107:0.898,0.097,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.031:0.97,0.03,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.466:0.585,0.363,0.052	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.292:0.711,0.287,0.002	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.962,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.121:0.883,0.113,0.004	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.099:0.905,0.091,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17086489	SNP-3.17085302.	C	A	.	PASS	AR2=0.992;DR2=0.993;AF=0.358	GT:DS:GP	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.161:0.846,0.148,0.007	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.089:0.913,0.085,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.104:0.899,0.098,0.003	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.934,0.064,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.387:0.641,0.331,0.028	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.956:0.001,0.043,0.957	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.917:0.001,0.08,0.919	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.918:0.002,0.079,0.92	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.179:0.829,0.163,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.847:0.009,0.134,0.856	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.147:0.858,0.136,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.969,0.03,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17086506	SNP-3.17085319.	A	G	.	PASS	AR2=1;DR2=1;AF=0.346	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17089448	SNP-3.17088261.	A	G	.	PASS	AR2=0.948;DR2=0.959;AF=0.503	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.918:0.002,0.077,0.921	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.813:0.009,0.169,0.822	1|1:1.819:0.008,0.165,0.827	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.823:0.008,0.161,0.831	1|1:1.845:0.006,0.144,0.85	1|1:2:0,0,1	1|1:1.969:0,0.031,0.969	1|1:2:0,0,1	1|1:1.825:0.008,0.16,0.833	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.837:0.004,0.154,0.842	0|1:0.91:0.19,0.709,0.101	1|1:1.965:0,0.034,0.966	0|0:0:1,0,0	1|1:1.929:0.002,0.068,0.93	1|1:1.835:0.006,0.153,0.841	0|0:0.623:0.407,0.564,0.03	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.57:0.023,0.383,0.593	0|1:1.158:0.086,0.67,0.244	1|1:1.912:0.002,0.085,0.913	1|1:1.83:0.036,0.099,0.865	0|1:0.682:0.318,0.682,0	1|1:1.509:0.058,0.374,0.567	1|0:0.779:0.244,0.732,0.023	0|0:0:1,0,0	0|1:1.012:0.001,0.986,0.013	1|1:1.701:0.026,0.247,0.727	0|0:0.08:0.923,0.074,0.003	1|1:2:0,0,1	1|1:1.972:0,0.027,0.973	1|1:1.944:0.001,0.054,0.945	1|1:1.772:0.005,0.218,0.777	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.397:0.611,0.381,0.008	1|1:2:0,0,1	0|0:0.068:0.934,0.064,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.618:0.005,0.372,0.623	1|1:1.975:0,0.025,0.975	1|1:2:0,0,1	1|1:1.976:0,0.023,0.977	0|1:1.429:0.006,0.559,0.435	0|1:0.844:0.182,0.792,0.026	0|0:0:1,0,0	1|1:1.81:0.009,0.172,0.819	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.817:0.009,0.165,0.826	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.578:0.433,0.557,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.134:0.868,0.13,0.002	0|0:0:1,0,0	1|1:1.983:0,0.017,0.983	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.961:0.001,0.037,0.962	0|0:0:1,0,0	0|0:0.071:0.932,0.065,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.811:0.009,0.171,0.82	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.883:0.005,0.108,0.887	1|1:1.827:0.007,0.158,0.835	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.825:0.008,0.159,0.833	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.818:0.008,0.165,0.826	1|1:1.868:0.004,0.124,0.872	1|1:2:0,0,1	0|0:0.202:0.819,0.159,0.022	1|1:1.938:0.002,0.058,0.94	0|0:0:1,0,0	1|1:1.823:0.008,0.161,0.831	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.833:0.007,0.153,0.84	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.827:0.008,0.158,0.835	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.375:0.095,0.436,0.47	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.233:0.079,0.609,0.312	1|1:1.944:0,0.055,0.945	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.812:0.009,0.17,0.821	1|1:1.843:0.007,0.143,0.85	1|1:1.813:0.009,0.169,0.822	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.957:0.001,0.041,0.958	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.902:0.01,0.077,0.913	1|1:1.986:0,0.013,0.986	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.863:0.006,0.125,0.869	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.972:0,0.027,0.972	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.639:0.478,0.404,0.118	0|0:0:1,0,0	1|0:1:0,1,0
+3	17089753	SNP-3.17088566.	C	A	.	PASS	AR2=0.995;DR2=0.996;AF=0.374	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.302:0.72,0.257,0.023	0|0:0.279:0.739,0.242,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.968,0.032,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.096:0.906,0.093,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.123:0.881,0.116,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.947,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.941,0.058,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17090397	SNP-3.17089210.	A	G	.	PASS	AR2=0.929;DR2=0.945;AF=0.23	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.153:0.852,0.143,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.891:0.305,0.498,0.197	1|1:1.35:0.128,0.393,0.478	0|0:0.803:0.358,0.48,0.162	1|1:2:0,0,1	1|1:1.382:0.083,0.451,0.466	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.76:0.386,0.467,0.147	0|0:0.075:0.925,0.075,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.761:0.386,0.467,0.147	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.841:0.292,0.575,0.133	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.65:0.452,0.446,0.102	0|1:1.203:0.144,0.509,0.347	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.904:0.228,0.64,0.132	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.194:0.816,0.174,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.999:0.001,0.999,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.2:0.811,0.178,0.011	0|0:0.13:0.872,0.126,0.002	0|0:0:1,0,0	0|0:0.32:0.691,0.298,0.011	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.187:0.821,0.171,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.147:0.86,0.134,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.788:0.366,0.48,0.154	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.514:0.053,0.381,0.567	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.681:0.032,0.254,0.713	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.932:0.24,0.587,0.173	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.367:0.1,0.433,0.467	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.159:0.846,0.149,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.646:0.033,0.289,0.678	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.55:0.033,0.385,0.582	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.542:0.053,0.352,0.595	1|0:0.903:0.303,0.491,0.206	0|0:0:1,0,0	1|1:2:0,0,1
+3	17090472	SNP-3.17089285.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.38	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.144:0.861,0.133,0.006	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.126:0.879,0.116,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0.024:0.976,0.024,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17090776	SNP-3.17089589.	C	A	.	PASS	AR2=0.978;DR2=0.984;AF=0.31	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.941:0.001,0.057,0.942	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.451:0.058,0.433,0.509	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.625:0.036,0.302,0.661	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.544:0.048,0.36,0.592	1|1:1.87:0.005,0.12,0.875	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.721:0.018,0.244,0.738	0|1:1:0,1,0	1|0:1.381:0.1,0.419,0.481	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.829:0.004,0.162,0.834	0|0:0.035:0.965,0.034,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.611:0.031,0.326,0.642	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.848:0.008,0.135,0.857	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.877:0.002,0.119,0.879	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.921:0.001,0.076,0.923	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.963:0.001,0.035,0.964	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.949:0.001,0.05,0.95	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.654:0.029,0.289,0.683	0|0:0:1,0,0
+3	17092256	SNP-3.17091069.	A	G	.	PASS	AR2=0.997;DR2=0.997;AF=0.257	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.97:0.045,0.94,0.015	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.954,0.045,0	0|0:0:1,0,0	0|0:0.028:0.973,0.027,0	0|0:0.057:0.944,0.055,0.001	0|0:0:1,0,0	0|0:0.049:0.952,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.969,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.834:0,0.166,0.834	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.881:0.005,0.109,0.886	0|0:0:1,0,0	1|1:2:0,0,1
+3	17092943	SNP-3.17091756.	A	G	.	PASS	AR2=1;DR2=1;AF=0.251	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.959:0,0.041,0.959	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17097439	SNP-3.17096252.	C	A	.	PASS	AR2=0.993;DR2=0.994;AF=0.378	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.076:0.926,0.072,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.202:0.8,0.198,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.112:0.891,0.107,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.208:0.799,0.194,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.158:0.843,0.155,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0.252:0.771,0.205,0.024	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.106:0.897,0.1,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|1:1:0,1,0	0|0:0.095:0.907,0.09,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.087:0.915,0.083,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.053:0.949,0.05,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.081:0.921,0.077,0.002	1|1:1.955:0,0.044,0.955	0|0:0:1,0,0
+3	17098846	SNP-3.17097659.	A	G	.	PASS	AR2=1;DR2=1;AF=0.304	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17099351	SNP-3.17098164.	A	G	.	PASS	AR2=1;DR2=1;AF=0.284	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17099628	SNP-3.17098441.	C	A	.	PASS	AR2=0.998;DR2=0.999;AF=0.361	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.394:0.606,0.394,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17100185	SNP-3.17098998.	A	G	.	PASS	AR2=0.949;DR2=0.963;AF=0.452	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.207:0.805,0.184,0.012	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.672:0.003,0.322,0.675	1|1:2:0,0,1	0|0:0.057:0.944,0.055,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.472:0.003,0.523,0.475	0|0:0:1,0,0	0|1:1.236:0.105,0.553,0.341	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.609:0.486,0.419,0.095	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.6:0.469,0.463,0.069	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.311:0.7,0.289,0.011	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.407:0.631,0.332,0.037	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.461:0.57,0.4,0.031	0|1:0.714:0.397,0.492,0.111	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.221:0.794,0.191,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.374:0.665,0.296,0.039	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.261:0.757,0.224,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.937:0,0.063,0.937	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.803:0,0.197,0.803	1|1:2:0,0,1	0|0:0.056:0.944,0.055,0.001	0|0:0.322:0.694,0.29,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.024:0.976,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.197:0.813,0.178,0.01	1|1:1.495:0.075,0.354,0.571	0|1:1.298:0.001,0.7,0.299	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.078:0.924,0.073,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.316:0.705,0.274,0.021	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.292:0.139,0.43,0.431	0|0:0:1,0,0	0|0:0.18:0.828,0.164,0.008	1|1:2:0,0,1	0|0:0.083:0.919,0.078,0.002	1|1:2:0,0,1	0|0:0.097:0.905,0.093,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.319:0.703,0.275,0.022	0|0:0.08:0.923,0.075,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.106:0.898,0.098,0.004	0|0:0.117:0.887,0.11,0.003	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.402:0.639,0.32,0.041	0|0:0:1,0,0	0|0:0.12:0.884,0.113,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.241:0.766,0.227,0.007	0|0:0.044:0.957,0.043,0.001	0|0:0.025:0.975,0.024,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.979:0,0.021,0.979	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.118:0.886,0.11,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.219:0.794,0.193,0.013	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.062:0.939,0.06,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.042:0.959,0.04,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.711:0.42,0.449,0.131	0|0:0:1,0,0	0|0:0.242:0.768,0.222,0.01
+3	17100860	SNP-3.17099673.	A	G	.	PASS	AR2=0.997;DR2=0.998;AF=0.236	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.491:0.528,0.452,0.019	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17101619	SNP-3.17100432.	C	A	.	PASS	AR2=0.995;DR2=0.996;AF=0.36	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.972:0.041,0.946,0.013	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.962,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.159:0.843,0.155,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.181:0.819,0.181,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.977:0,0.022,0.978	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.741:0.014,0.231,0.755	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.958:0,0.041,0.959	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.026:0.974,0.025,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.934,0.065,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.107:0.897,0.099,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.97:0,0.03,0.97	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17102747	SNP-3.17101560.	A	G	.	PASS	AR2=0.987;DR2=0.991;AF=0.338	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.012:0.988,0.012,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.532:0.057,0.354,0.589	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.014:0.986,0.014,0	1|0:1:0,1,0	0|0:0.001:0.999,0.001,0	0|0:0.913:0.263,0.561,0.176	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.169:0.834,0.163,0.003	1|1:2:0,0,1	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.977,0.023,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|1:1.42:0.085,0.41,0.505	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.961,0.038,0.001	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.02:0.98,0.02,0	0|0:0.008:0.992,0.008,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.478:0.07,0.382,0.548	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17103110	SNP-3.17101923.	A	G	.	PASS	AR2=0.888;DR2=0.923;AF=0.48	GT:DS:GP	1|0:1:0,1,0	1|1:1.986:0,0.014,0.986	1|1:1.941:0.001,0.056,0.942	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.768:0.015,0.203,0.783	0|1:1.355:0.104,0.437,0.459	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.407:0.087,0.42,0.494	1|0:1:0,1,0	0|1:1.469:0.074,0.382,0.543	1|0:1.351:0.099,0.45,0.451	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.414:0.087,0.412,0.501	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1.342:0.11,0.439,0.451	1|1:1.362:0.101,0.435,0.464	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.388:0.095,0.422,0.483	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1.311:0.104,0.481,0.415	0|0:0.815:0.518,0.149,0.333	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1.284:0.105,0.506,0.389	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.794:0.334,0.538,0.128	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.959:0.001,0.04,0.959	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:0.865:0.325,0.484,0.191	1|1:1.77:0.015,0.201,0.785	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.717:0.011,0.262,0.728	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.527:0.036,0.402,0.562	1|0:1:0,1,0	0|1:0.723:0.405,0.467,0.128	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.944:0.001,0.054,0.945	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.921:0.004,0.072,0.924	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.678:0.017,0.288,0.695	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.335:0.11,0.445,0.445	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1.294:0.14,0.426,0.434	1|0:1:0,1,0	1|0:1.311:0.117,0.454,0.429	1|1:1.364:0.101,0.435,0.464	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.96:0.001,0.038,0.961	0|0:0.345:0.677,0.3,0.023	1|1:1.534:0.058,0.35,0.592	0|0:0:1,0,0	1|1:1.055:0.193,0.558,0.249	0|0:0:1,0,0	1|1:1.629:0.006,0.358,0.636	1|0:1.233:0.139,0.49,0.372	1|1:1.591:0.028,0.354,0.618	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.338:0.085,0.491,0.423	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.384:0.087,0.441,0.471	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.355:0.104,0.438,0.458	1|0:1.414:0.087,0.412,0.501	1|0:1.435:0.084,0.397,0.519	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.436:0.077,0.409,0.514	1|1:1.91:0.002,0.086,0.912	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.937:0.001,0.061,0.938	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.784:0.013,0.19,0.797	1|1:1.958:0.001,0.041,0.959	1|1:1.917:0.004,0.075,0.921	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.855:0.01,0.126,0.864	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.798:0.012,0.178,0.81	0|0:0.5:0.565,0.369,0.066	1|1:2:0,0,1	0|1:0.972:0.281,0.466,0.253	0|0:0:1,0,0	1|1:2:0,0,1
+3	17106949	SNP-3.17105762.	A	G	.	PASS	AR2=1;DR2=1;AF=0.304	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17107044	SNP-3.17105857.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.346	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.943,0.056,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.976:0,0.023,0.976	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.906:0,0.094,0.906	1|1:1.94:0.001,0.057,0.942	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.988,0.012,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.966:0,0.033,0.967	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.891:0,0.109,0.891	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.972:0,0.027,0.972	0|0:0:1,0,0
+3	17107091	SNP-3.17105904.	A	G	.	PASS	AR2=0.978;DR2=0.983;AF=0.247	GT:DS:GP	0|1:1.14:0.03,0.799,0.171	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.686:0.025,0.265,0.711	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.649:0.03,0.291,0.679	1|1:1.79:0.013,0.185,0.802	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.944:0.001,0.054,0.945	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.852:0.011,0.126,0.863	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.721:0.019,0.241,0.74	1|1:1.676:0.028,0.269,0.703	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.681:0.025,0.268,0.706	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.669:0.028,0.276,0.697	1|1:1.365:0.218,0.2,0.582	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17107615	SNP-3.17106428.	A	G	.	PASS	AR2=0.992;DR2=0.994;AF=0.283	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.802:0.013,0.172,0.815	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.945:0.001,0.054,0.946	1|1:2:0,0,1	1|1:1.761:0.013,0.212,0.775	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.855:0.004,0.137,0.859	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.824:0.005,0.165,0.83	1|0:1:0,1,0	1|1:1.805:0.007,0.182,0.811	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.875:0.001,0.123,0.876	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.93:0.001,0.067,0.932	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.854:0.004,0.139,0.858	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.932:0.002,0.064,0.934	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17113483	SNP-3.17112296.	A	G	.	PASS	AR2=0.983;DR2=0.985;AF=0.232	GT:DS:GP	0|0:0.038:0.964,0.035,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.886:0.003,0.108,0.889	1|1:1.965:0,0.034,0.966	1|1:1.953:0.001,0.046,0.954	1|1:1.953:0,0.046,0.954	0|0:0:1,0,0	1|1:1.914:0.002,0.082,0.916	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:1.936:0.001,0.061,0.938	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	1|1:1.894:0.001,0.104,0.895	1|1:2:0,0,1	1|1:1.954:0,0.045,0.954	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.955:0.001,0.044,0.955	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.075:0.926,0.073,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.955,0.044,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.124:0.879,0.117,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.128:0.875,0.121,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.171:0.835,0.16,0.005	0|0:0.104:0.899,0.098,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0.036:0.964,0.035,0	0|0:0:1,0,0	0|0:0.076:0.925,0.073,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.903,0.097,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.006:0.057,0.881,0.063	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.938,0.061,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.011:0.989,0.011,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0.077:0.923,0.077,0	0|0:0.016:0.984,0.016,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.945,0.054,0.001	0|0:0:1,0,0	0|0:0.069:0.932,0.066,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.026:0.974,0.026,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.991:0,0.009,0.991	1|1:1.513:0.066,0.355,0.579	1|1:2:0,0,1	0|0:0.138:0.867,0.128,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.946,0.053,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.961:0,0.038,0.962	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.951:0.001,0.047,0.952	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.033:0.967,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0
+3	17114176	SNP-3.17112989.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.355	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.768:0.235,0.762,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.739:0,0.261,0.739	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17114400	SNP-3.17113213.	C	A	.	PASS	AR2=1;DR2=1;AF=0.354	GT:DS:GP	0|0:0.055:0.945,0.055,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17116915	SNP-3.17115728.	C	A	.	PASS	AR2=0.982;DR2=0.985;AF=0.37	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.977,0.022,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.057:0.944,0.055,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.396:0.621,0.361,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.187:0.819,0.175,0.006	0|0:0.087:0.916,0.082,0.003	1|1:2:0,0,1	0|0:0.139:0.867,0.128,0.006	0|0:0.095:0.907,0.09,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.085:0.916,0.082,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.157:0.849,0.146,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.194:0.816,0.175,0.009	0|0:0.205:0.803,0.189,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.937,0.061,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.192:0.817,0.174,0.009	0|0:0.191:0.819,0.172,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.027:0.973,0.026,0	0|0:0.019:0.981,0.018,0	0|0:0.149:0.857,0.137,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.155:0.849,0.147,0.004	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.885:0.003,0.11,0.888	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.443:0.572,0.413,0.015	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.895:0.003,0.098,0.899	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.926,0.072,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.94,0.059,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.959,0.041,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.059:0.942,0.057,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.947,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.072:0.929,0.069,0.001	0|0:0.031:0.969,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.093:0.909,0.088,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.095:0.907,0.091,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17117693	SNP-3.17116506.	C	A	.	PASS	AR2=0.967;DR2=0.971;AF=0.389	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.163:0.845,0.147,0.008	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.191:0.82,0.169,0.011	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.096:0.906,0.092,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.1:0.903,0.095,0.002	0|0:0.115:0.888,0.109,0.003	0|0:0:1,0,0	0|0:0.114:0.889,0.108,0.003	0|0:0:1,0,0	0|0:0.073:0.928,0.07,0.001	0|0:0.049:0.952,0.047,0.001	0|1:1:0,1,0	0|0:0.142:0.863,0.133,0.004	0|0:0:1,0,0	0|0:0.194:0.81,0.186,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.305:0.718,0.259,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.112:0.891,0.105,0.004	0|0:0:1,0,0	0|0:0.146:0.863,0.128,0.009	0|0:0:1,0,0	0|0:0.264:0.747,0.242,0.011	0|0:0:1,0,0	0|0:0.2:0.812,0.176,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.292:0.723,0.263,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.941,0.058,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.164:0.843,0.15,0.007	0|1:1:0,1,0	0|0:0.085:0.918,0.078,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.82:0.005,0.17,0.825	1|1:2:0,0,1	0|0:0.085:0.917,0.081,0.002	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|0:1.001:0.001,0.996,0.003	1|1:2:0,0,1	0|1:1.001:0,0.999,0.001	1|1:1.715:0.006,0.274,0.72	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.118:0.886,0.11,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.242:0.774,0.211,0.015	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.966:0,0.034,0.966	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.273:0.741,0.245,0.014	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.185:0.824,0.168,0.008	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.001:0,0.999,0.001	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.113:0.889,0.108,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.957,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.116:0.888,0.109,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.089:0.912,0.087,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.199:0.811,0.179,0.01	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.065:0.936,0.063,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.906,0.092,0.002	0|0:0.093:0.909,0.088,0.003	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.092:0.91,0.087,0.002	0|0:0.036:0.964,0.036,0	0|0:0.118:0.885,0.111,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.189:0.814,0.183,0.003	0|0:0:1,0,0	0|0:0.178:0.827,0.168,0.005	0|0:0.191:0.812,0.185,0.003	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.19:0.813,0.184,0.003	0|0:0.078:0.924,0.074,0.002	0|0:0.181:0.828,0.163,0.009	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.19:0.813,0.184,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.046:0.956,0.043,0.001	0|0:0.11:0.894,0.103,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.238:0.781,0.201,0.019	0|0:0.046:0.954,0.046,0	0|0:0.148:0.858,0.136,0.006	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0
+3	17118886	SNP-3.17117699.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.352	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.912:0.311,0.465,0.223	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17120131	SNP-3.17118944.	A	G	.	PASS	AR2=1;DR2=1;AF=0.387	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17120266	SNP-3.17119079.	A	G	.	PASS	AR2=1;DR2=1;AF=0.313	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17120722	SNP-3.17119535.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.337	GT:DS:GP	0|0:0.111:0.904,0.081,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.954:0.001,0.044,0.955	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17123162	SNP-3.17121975.	A	G	.	PASS	AR2=0.973;DR2=0.978;AF=0.319	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.222:0.792,0.195,0.013	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.902:0.001,0.096,0.903	1|1:1.971:0,0.029,0.971	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.973:0,0.026,0.973	0|0:0.217:0.788,0.208,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.2:0.811,0.179,0.01	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.461:0.574,0.391,0.035	0|0:0:1,0,0	0|0:0.058:0.945,0.052,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.249:0.759,0.234,0.007	0|1:0.712:0.411,0.467,0.122	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.013:0.988,0.012,0	0|0:0:1,0,0	0|0:0.044:0.958,0.041,0.001	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.495:0.565,0.376,0.06	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.178:0.827,0.169,0.005	0|0:0:1,0,0	0|0:0.112:0.891,0.106,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.28:0.725,0.269,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.894:0.001,0.103,0.895	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.921:0.289,0.502,0.21	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.253:0.764,0.22,0.017	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0,0.025,0.975	1|1:2:0,0,1	0|0:0.094:0.909,0.088,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.027,0.972	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.399:0.64,0.321,0.039	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.934:0.001,0.065,0.935	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.922,0.076,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.234:0.781,0.203,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.062:0.941,0.056,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.203:0.808,0.181,0.011	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	17123460	SNP-3.17122273.	C	A	.	PASS	AR2=0.971;DR2=0.978;AF=0.3	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.98:0,0.019,0.981	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.731:0.014,0.24,0.745	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.95:0.001,0.048,0.951	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.341:0.112,0.435,0.453	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.003:0.205,0.588,0.207	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.89:0.002,0.105,0.892	1|1:2:0,0,1	1|1:1.816:0.011,0.162,0.827	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.888:0.003,0.106,0.891	0|0:0.366:0.675,0.284,0.041	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.667:0.026,0.281,0.693	1|1:1.941:0.001,0.057,0.942	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.893:0.004,0.1,0.896	1|1:2:0,0,1	1|1:1.905:0.002,0.091,0.907	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.769:0.007,0.216,0.777	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.63:0.032,0.305,0.662	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.866:0.005,0.124,0.871	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.629:0.03,0.312,0.658	0|1:0.798:0.329,0.545,0.126	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.078:0.047,0.828,0.125	1|1:2:0,0,1	1|1:1.95:0.001,0.048,0.951	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.342:0.029,0.601,0.371	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.791:0.009,0.191,0.8	0|0:0:1,0,0
+3	17123994	SNP-3.17122807.	C	A	.	PASS	AR2=0.978;DR2=0.982;AF=0.339	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.679:0.024,0.273,0.703	0|0:0:1,0,0	0|0:0.035:0.965,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.758:0.015,0.212,0.773	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.122:0.878,0.122,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.112:0.89,0.107,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.704:0.022,0.252,0.726	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.71:0.022,0.246,0.732	1|1:1.87:0.004,0.123,0.874	1|1:1.742:0.017,0.224,0.759	1|1:1.69:0.023,0.263,0.713	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.847:0.008,0.136,0.856	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.922:0.001,0.076,0.923	1|1:1.687:0.024,0.266,0.71	1|1:1.756:0.015,0.214,0.771	1|1:1.696:0.019,0.266,0.715	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.928:0.002,0.069,0.93	1|1:2:0,0,1	1|1:1.726:0.017,0.239,0.743	1|1:1.848:0.004,0.143,0.852	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.017:0.983,0.017,0	1|1:1.712:0.022,0.244,0.734	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.946:0,0.053,0.947	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.961,0.039,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.744:0.016,0.223,0.76	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.951:0,0.048,0.952	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.86:0.002,0.136,0.862	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17126152	SNP-3.17124965.	C	A	.	PASS	AR2=0.996;DR2=0.996;AF=0.337	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:1.942:0.001,0.057,0.942	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.987:0.014,0.985,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.91:0.002,0.086,0.912	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.961:0.001,0.038,0.961	1|1:1.968:0.001,0.03,0.969	1|1:1.972:0.001,0.026,0.973	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:1.94:0.001,0.058,0.941	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.938:0.001,0.06,0.939	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.963:0.001,0.036,0.963	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.924:0.002,0.073,0.926	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.934:0.001,0.063,0.936	1|1:1.93:0.001,0.068,0.931	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.932:0.001,0.065,0.934	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.945:0.001,0.053,0.946	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.942:0.001,0.056,0.943	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.884:0.003,0.11,0.887	0|0:0:1,0,0
+3	17126775	SNP-3.17125588.	A	G	.	PASS	AR2=0.991;DR2=0.992;AF=0.391	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.156:0.851,0.142,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.235:0.779,0.207,0.014	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.245:0.77,0.215,0.015	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0.169:0.834,0.163,0.003	0|0:0.032:0.968,0.032,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.218:0.794,0.195,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.879:0.004,0.113,0.883	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.016,0.984	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.978:0,0.022,0.978	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.984:0,0.015,0.984	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.929:0.001,0.069,0.93	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.839:0.006,0.148,0.846	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.905:0.002,0.091,0.907	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.886:0.003,0.108,0.889	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.134:0.873,0.12,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.149:0.858,0.136,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17127527	SNP-3.17126340.	C	A	.	PASS	AR2=0.994;DR2=0.994;AF=0.322	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.943:0.057,0.943,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.876:0.005,0.115,0.88	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.841:0.005,0.149,0.846	1|1:1.879:0.004,0.114,0.883	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.851:0.005,0.139,0.856	1|1:2:0,0,1	1|1:1.845:0.005,0.146,0.85	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.88:0.004,0.112,0.884	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.881:0.004,0.112,0.885	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.839:0.006,0.148,0.846	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.89:0.005,0.1,0.895	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17128413	SNP-3.17127226.	C	A	.	PASS	AR2=0.973;DR2=0.98;AF=0.419	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.207:0.808,0.177,0.015	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.524:0.554,0.368,0.078	0|0:0.458:0.603,0.335,0.062	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0.285:0.731,0.253,0.016	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.935:0.002,0.061,0.937	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.92:0,0.079,0.92	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.953:0,0.046,0.954	1|0:1:0,1,0	1|1:1.964:0,0.035,0.965	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.824:0.349,0.478,0.173	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.332:0.694,0.279,0.027	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.436:0.612,0.34,0.048	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.348:0.684,0.285,0.032	0|0:0:1,0,0	0|1:0.821:0.351,0.478,0.171	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.537:0.54,0.384,0.077	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.264:0.754,0.228,0.018	0|0:0.438:0.611,0.34,0.049	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0
+3	17129150	SNP-3.17127963.	A	G	.	PASS	AR2=1;DR2=1;AF=0.391	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17129302	SNP-3.17128115.	C	A	.	PASS	AR2=1;DR2=1;AF=0.354	GT:DS:GP	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.98:0,0.019,0.98	0|0:0.024:0.976,0.023,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17130280	SNP-3.17129093.	C	A	.	PASS	AR2=0.96;DR2=0.97;AF=0.409	GT:DS:GP	0|0:0.126:0.878,0.118,0.004	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.19:0.822,0.166,0.012	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.584:0.435,0.545,0.019	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.936:0.004,0.057,0.939	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.559:0.464,0.514,0.022	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.294:0.731,0.244,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.333:0.691,0.284,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.945,0.054,0.001	0|0:0:1,0,0	0|0:0.25:0.765,0.219,0.015	0|0:0.04:0.96,0.039,0	0|0:0:1,0,0	1|0:1.127:0.116,0.64,0.243	0|0:0:1,0,0	0|0:0.134:0.87,0.127,0.003	1|0:1:0,1,0	0|0:0.262:0.756,0.226,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.371:0.66,0.309,0.031	0|0:0:1,0,0	0|0:0.375:0.651,0.322,0.027	0|0:0:1,0,0	0|0:0.169:0.841,0.15,0.009	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.581:0.04,0.339,0.621	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.873:0.003,0.121,0.876	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.339:0.68,0.301,0.019	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.967:0,0.032,0.967	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.755:0.017,0.211,0.772	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.214:0.798,0.189,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.209:0.804,0.183,0.013	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.13:0.876,0.118,0.006	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.238:0.776,0.211,0.013	0|0:0:1,0,0	0|0:0.33:0.681,0.309,0.011	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.259:0.761,0.219,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.128:0.879,0.114,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.502:0.615,0.268,0.117	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.52:0.517,0.447,0.037	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.125:0.88,0.116,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17131818	SNP-3.17130631.	C	A	.	PASS	AR2=0.964;DR2=0.973;AF=0.423	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.325:0.701,0.272,0.027	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.426:0.62,0.335,0.046	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:0.473:0.584,0.358,0.058	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:0.871:0.254,0.62,0.125	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.399:0.637,0.328,0.035	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.09:0.91,0.089,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.831:0,0.169,0.831	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.35:0.682,0.286,0.032	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.328:0.706,0.259,0.034	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.397:0.642,0.318,0.039	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:0.433:0.614,0.338,0.047	1|0:1:0,1,0	0|1:0.801:0.284,0.63,0.086	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.313:0.714,0.259,0.027	0|1:1:0,1,0	0|0:0.287:0.732,0.248,0.019	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.334:0.694,0.277,0.028	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.32:0.708,0.264,0.028	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.381:0.653,0.314,0.033	1|0:1:0,1,0	0|0:0.278:0.746,0.231,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:0.351:0.682,0.286,0.032	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.365:0.671,0.294,0.036	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0
+3	17131858	SNP-3.17130671.	A	G	.	PASS	AR2=0.996;DR2=0.997;AF=0.244	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.169:0.844,0.144,0.012	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.132:0.874,0.12,0.006	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.287:0.734,0.245,0.021	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17132905	SNP-3.17131718.	C	A	.	PASS	AR2=0.984;DR2=0.987;AF=0.422	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.2:0.82,0.161,0.019	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1.012:0.127,0.733,0.139	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.208:0.799,0.195,0.006	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.139:0.864,0.133,0.003	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.238:0.773,0.217,0.01	0|1:1:0,1,0	0|0:0.11:0.892,0.107,0.002	1|0:0.786:0.354,0.506,0.14	0|0:0.024:0.976,0.024,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.2:0.809,0.181,0.01	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.419:0.617,0.348,0.036	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.348:0.685,0.282,0.033	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.116:0.885,0.114,0.001	0|0:0:1,0,0	1|1:1.81:0.013,0.163,0.824	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.154:0.854,0.138,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17133832	SNP-3.17132645.	C	A	.	PASS	AR2=0.998;DR2=0.999;AF=0.361	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.698:0,0.302,0.698	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.984:0,0.016,0.984	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17134497	SNP-3.17133310.	A	G	.	PASS	AR2=0.928;DR2=0.948;AF=0.311	GT:DS:GP	0|0:0.015:0.986,0.014,0	0|0:0:1,0,0	0|0:0.416:0.663,0.258,0.079	1|1:2:0,0,1	1|1:1.415:0.139,0.306,0.555	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.696:0.019,0.266,0.715	1|1:2:0,0,1	1|1:1.861:0,0.139,0.861	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.618:0.043,0.297,0.66	1|1:2:0,0,1	1|1:1.411:0.091,0.406,0.502	1|1:1.657:0.035,0.272,0.693	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.317:0.123,0.436,0.44	1|1:2:0,0,1	1|1:1.657:0.031,0.281,0.688	1|1:1.688:0.028,0.257,0.715	1|1:1.645:0.034,0.287,0.679	1|1:2:0,0,1	1|0:1.477:0.079,0.366,0.555	1|1:1.68:0.025,0.269,0.706	1|1:1.516:0.059,0.367,0.575	1|1:1.542:0.049,0.36,0.591	0|0:0.085:0.915,0.085,0	0|0:0:1,0,0	1|1:1.573:0.043,0.341,0.616	1|1:1.564:0.024,0.389,0.588	1|1:2:0,0,1	1|1:1.461:0.08,0.379,0.541	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.445:0.076,0.403,0.521	1|1:2:0,0,1	1|1:1.625:0.035,0.304,0.661	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.732:0.016,0.236,0.748	1|1:2:0,0,1	1|1:1.447:0.078,0.397,0.525	0|0:0:1,0,0	1|1:1.51:0.062,0.367,0.572	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.716:0.022,0.24,0.738	0|0:0.161:0.843,0.153,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.452:0.078,0.392,0.53	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.537:0.059,0.344,0.597	0|0:0:1,0,0	0|0:0.039:0.962,0.037,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.601:0.035,0.329,0.636	1|0:1.437:0.083,0.398,0.519	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.673:0.025,0.277,0.698	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	1|1:1.677:0.026,0.271,0.703	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.683:0.025,0.266,0.709	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.723:0.02,0.237,0.743	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17137062	SNP-3.17135875.	C	A	.	PASS	AR2=0.972;DR2=0.976;AF=0.343	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.153:0.848,0.151,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.971:0.033,0.962,0.005	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	1|1:1.909:0.005,0.082,0.913	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.064:0.938,0.06,0.002	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.101:0.902,0.096,0.002	0|0:0.027:0.973,0.026,0	0|0:0.065:0.936,0.063,0.001	0|0:0.372:0.636,0.355,0.008	0|0:0:1,0,0	0|0:0.122:0.882,0.114,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.112:0.889,0.11,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.963,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.032:0.968,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:0.799:0.362,0.477,0.161	0|0:0.408:0.592,0.408,0	1|0:1:0,1,0	0|1:1.044:0.211,0.534,0.255	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.035:0.227,0.511,0.262	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.267:0.737,0.26,0.004	1|1:1.944:0.001,0.055,0.945	1|1:2:0,0,1	1|1:1.984:0,0.016,0.984	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.94:0.001,0.058,0.941	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.979:0,0.021,0.979	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.858:0.005,0.132,0.863	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.074:0.928,0.069,0.002	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.067:0.934,0.065,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.371:0.635,0.359,0.006	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1.037:0.244,0.475,0.281	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.845:0.004,0.148,0.848	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.822:0.018,0.142,0.84	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.985:0,0.014,0.985	1|1:1.63:0.018,0.333,0.649	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.917:0.002,0.078,0.92	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.929,0.069,0.002	0|0:0.032:0.969,0.031,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17138730	SNP-3.17137543.	A	G	.	PASS	AR2=0.982;DR2=0.986;AF=0.214	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.815:0.003,0.179,0.818	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.9:0.006,0.088,0.906	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.614:0.042,0.301,0.657	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.846:0.003,0.148,0.849	1|0:1:0,1,0	1|1:1.895:0.005,0.096,0.9	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.943,0.055,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.943,0.057,0	0|0:0.062:0.939,0.06,0.001	0|0:0.082:0.919,0.079,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.965,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.97,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.958,0.041,0.001	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.961:0.303,0.434,0.263	0|0:0.015:0.985,0.015,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0.028:0.972,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.461:0.04,0.459,0.501	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.919:0.003,0.076,0.922	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.026:0.974,0.025,0.001	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17140286	SNP-3.17139099.	A	G	.	PASS	AR2=0.995;DR2=0.997;AF=0.335	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.119:0.885,0.111,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.44:0.569,0.423,0.009	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.367:0.663,0.306,0.03	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17140784	SNP-3.17139597.	A	G	.	PASS	AR2=0.971;DR2=0.977;AF=0.28	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.577:0.051,0.322,0.628	1|1:2:0,0,1	0|1:1.133:0.059,0.749,0.192	1|0:1:0,1,0	1|1:1.87:0.005,0.12,0.875	0|1:1.195:0.155,0.495,0.35	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.928:0.002,0.068,0.93	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.678:0.032,0.257,0.711	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.604:0.072,0.251,0.677	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.608:0.018,0.355,0.627	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.843:0.01,0.138,0.853	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.188:0.164,0.485,0.351	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.36:0.097,0.447,0.456	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.823:0.009,0.16,0.831	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.619:0.037,0.306,0.656	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.811:0.009,0.17,0.82	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.894:0.002,0.101,0.896	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.925:0.002,0.072,0.927	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.855:0.008,0.13,0.863	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.858:0.008,0.126,0.866	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17143836	SNP-3.17142649.	C	A	.	PASS	AR2=0.955;DR2=0.967;AF=0.265	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.807:0.009,0.174,0.816	0|0:0:1,0,0	1|1:1.979:0.001,0.019,0.98	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.208:0.162,0.467,0.371	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.188:0.172,0.467,0.36	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.929:0.001,0.07,0.93	1|1:2:0,0,1	1|1:1.845:0.003,0.149,0.848	1|1:1.56:0.058,0.325,0.617	0|0:0:1,0,0	1|1:1.572:0.024,0.381,0.596	1|1:1.792:0.01,0.189,0.801	0|0:0:1,0,0	1|1:1.396:0.063,0.477,0.46	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.226:0.199,0.377,0.425	0|0:0:1,0,0	1|1:1.774:0.012,0.201,0.787	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.517:0.063,0.358,0.58	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.85:0.007,0.136,0.857	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.778:0.013,0.196,0.791	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.453:0.069,0.41,0.522	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.666:0.022,0.29,0.688	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.755:0.015,0.215,0.77	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.083:0.194,0.529,0.277	0|0:0.247:0.783,0.186,0.03	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.769:0.009,0.213,0.778	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.444:0.576,0.404,0.02	1|1:1.956:0.001,0.042,0.957	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.589:0.026,0.358,0.615	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17158273	SNP-3.17157082.	A	G	.	PASS	AR2=0.994;DR2=0.996;AF=0.225	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.811:0.008,0.172,0.82	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.205:0.795,0.205,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.556:0.034,0.376,0.59	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0
+3	17162405	SNP-3.17161214.	C	A	.	PASS	AR2=1;DR2=1;AF=0.352	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.054:0.948,0.051,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17162768	SNP-3.17161577.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.363	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.392:0.004,0.601,0.396	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.95,0.05,0	1|0:1:0,1,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17165364	SNP-3.17164173.	C	A	.	PASS	AR2=0.997;DR2=0.998;AF=0.404	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.268:0.751,0.229,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.303:0.698,0.3,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.039:0.962,0.038,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17167703	SNP-3.17166512.	A	G	.	PASS	AR2=0.979;DR2=0.983;AF=0.46	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.205:0.807,0.181,0.012	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.876:0.004,0.115,0.88	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.876:0.004,0.117,0.879	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.85:0.006,0.138,0.856	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.452:0.043,0.462,0.495	1|1:2:0,0,1	1|1:1.597:0.029,0.345,0.626	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.864:0.005,0.127,0.869	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.096:0.908,0.088,0.004	0|0:0.075:0.926,0.072,0.002	0|0:0.09:0.914,0.083,0.003	0|0:0.299:0.733,0.234,0.032	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.17:0.836,0.158,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.144:0.859,0.137,0.003	0|0:0:1,0,0	0|0:0.092:0.911,0.087,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.365:0.124,0.388,0.489	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.879:0.004,0.114,0.883	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.02:0.147,0.686,0.167	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.934:0,0.065,0.934	1|1:1.916:0.002,0.079,0.919	1|1:1.75:0.017,0.216,0.767	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.786:0.372,0.471,0.158	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.89:0.003,0.103,0.893	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17168660	SNP-3.17167469.	A	G	.	PASS	AR2=0.991;DR2=0.993;AF=0.384	GT:DS:GP	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.074:0.927,0.073,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.975,0.024,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.684:0.434,0.448,0.118	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.274:0.745,0.236,0.019	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.289:0.732,0.247,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.083:0.918,0.081,0.001	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.684:0.434,0.448,0.118	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17170058	SNP-3.17168867.	A	G	.	PASS	AR2=0.997;DR2=0.997;AF=0.333	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.879:0.005,0.111,0.884	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.845:0.004,0.148,0.848	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.807:0.01,0.173,0.817	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.961:0.002,0.035,0.963	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.874:0.004,0.119,0.878	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.944:0.001,0.054,0.945	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17171398	SNP-3.17170207.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.327	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.681:0.328,0.664,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.546:0.001,0.451,0.547	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.956:0.001,0.042,0.957	1|1:2:0,0,1	1|1:1.965:0.001,0.033,0.966	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17175832	SNP-3.17174641.	C	A	.	PASS	AR2=0.989;DR2=0.991;AF=0.402	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.816:0.01,0.164,0.826	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.943,0.056,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:1.915:0,0.085,0.915	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.05,0.001	0|0:0:1,0,0	0|0:0.041:0.959,0.041,0	0|0:0.04:0.96,0.04,0	0|0:0:1,0,0	0|0:0.034:0.966,0.034,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.028:0.972,0.028,0	1|1:1.997:0,0.003,0.997	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.728:0.02,0.232,0.748	1|1:2:0,0,1	1|1:1.721:0.02,0.239,0.741	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.776:0.013,0.198,0.789	1|1:1.983:0,0.017,0.983	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.983:0,0.016,0.983	0|0:0:1,0,0	1|1:1.991:0,0.009,0.991	1|1:1.737:0.018,0.228,0.755	1|1:2:0,0,1	1|1:1.963:0,0.036,0.964	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	0|0:0.059:0.942,0.057,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.113:0.89,0.108,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	1|1:1.816:0.009,0.166,0.825	1|1:1.741:0.016,0.226,0.757	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.941,0.058,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.057:0.944,0.055,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17177886	SNP-3.17176695.	A	G	.	PASS	AR2=0.982;DR2=0.986;AF=0.276	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.199:0.807,0.186,0.007	1|1:2:0,0,1	0|0:0.192:0.817,0.174,0.009	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.931,0.067,0.001	0|0:0:1,0,0	0|0:0.034:0.967,0.033,0	0|0:0.056:0.945,0.055,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.905,0.093,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.072:0.93,0.069,0.001	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.386:0.653,0.309,0.039	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.313:0.718,0.252,0.03	0|0:0.357:0.678,0.286,0.036	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.115:0.89,0.105,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.239:0.776,0.209,0.015	0|0:0.206:0.805,0.184,0.011	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.123:0.881,0.115,0.004	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.327:0.7,0.273,0.027	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.017:0.983,0.017,0	0|0:0.076:0.931,0.062,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.109:0.895,0.102,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17177922	SNP-3.17176731.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.389	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.903:0.004,0.09,0.907	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.098:0.907,0.089,0.004	0|1:1:0,1,0	0|0:0.032:0.968,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.037:0.963,0.037,0	1|1:1.964:0.001,0.035,0.965	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.94:0.001,0.059,0.94	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.963:0,0.036,0.964	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	17178542	SNP-3.17177351.	C	A	.	PASS	AR2=0.99;DR2=0.991;AF=0.377	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.853:0.006,0.134,0.86	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.957:0.002,0.04,0.958	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.956:0.001,0.041,0.958	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:1.883:0.004,0.108,0.888	1|1:1.959:0,0.041,0.959	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.879:0.005,0.112,0.883	1|1:1.884:0.004,0.108,0.888	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:1.727:0.013,0.246,0.741	0|0:0:1,0,0	1|1:1.969:0,0.031,0.969	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.972:0,0.027,0.973	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	1|1:1.954:0.001,0.044,0.955	0|0:0:1,0,0	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	1|1:1.957:0.001,0.042,0.957	1|1:1.955:0.001,0.044,0.956	1|1:1.814:0.006,0.174,0.82	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.824:0.001,0.174,0.825	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.776:0,0.223,0.776	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.016,0.983	1|1:1.963:0,0.037,0.963	1|1:2:0,0,1	1|1:1.937:0.001,0.062,0.938	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.959:0,0.04,0.959	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.885:0.004,0.106,0.89	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.965:0,0.034,0.966	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.802:0.009,0.179,0.811	0|0:0:1,0,0
+3	17180744	SNP-3.17179553.	A	G	.	PASS	AR2=0.905;DR2=0.933;AF=0.247	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.589:0.1,0.211,0.689	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.459:0.545,0.45,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.227:0.789,0.195,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.974:0.207,0.611,0.182	0|0:0.049:0.951,0.048,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.262:0.75,0.238,0.012	1|1:2:0,0,1	1|0:1.144:0,0.856,0.144	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.462:0.608,0.321,0.071	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.383:0.678,0.261,0.061	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.72:0.384,0.512,0.104	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.962,0.036,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.383:0.111,0.395,0.494	1|1:2:0,0,1	0|1:1.113:0.217,0.452,0.33	1|1:1.952:0.001,0.047,0.953	1|1:1.968:0.001,0.03,0.969	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.66:0.439,0.462,0.099	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.021,0.001	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.963,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.471:0.09,0.349,0.561	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.97,0.03,0	0|0:0.042:0.958,0.041,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.496:0.554,0.396,0.05	0|0:0.451:0.586,0.376,0.037	0|0:0:1,0,0	0|0:0.068:0.933,0.066,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.957,0.042,0	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0.085:0.916,0.083,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.97,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.677:0.435,0.453,0.112	1|1:1.328:0.116,0.441,0.443	0|0:0:1,0,0	0|0:0.038:0.963,0.035,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.251:0.777,0.195,0.028	0|0:0.661:0.503,0.334,0.164	0|0:0.1:0.906,0.087,0.006	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.617:0.047,0.289,0.664	0|0:0.227:0.787,0.2,0.014	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.692:0.447,0.414,0.139	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.531:0.55,0.369,0.081	0|0:0:1,0,0	0|0:0.787:0.408,0.397,0.195	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.206:0.804,0.185,0.011	0|0:0:1,0,0	0|1:1.011:0.218,0.553,0.229	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.431:0.617,0.334,0.049	1|1:2:0,0,1	0|0:0.774:0.375,0.476,0.149	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.951,0.048,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.843:0.224,0.71,0.067	0|0:0.382:0.657,0.303,0.04	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.037:0.963,0.037,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.957,0.042,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.117:0.899,0.085,0.016	0|0:0:1,0,0
+3	17180764	SNP-3.17179573.	A	G	.	PASS	AR2=0.979;DR2=0.984;AF=0.389	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.049,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.365:0.659,0.318,0.024	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.966:0.001,0.032,0.967	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.901:0.003,0.093,0.904	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.94:0.001,0.058,0.941	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.305:0.718,0.258,0.024	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.277:0.744,0.235,0.021	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.276:0.745,0.234,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:1.967:0.001,0.031,0.968	0|0:0.338:0.665,0.332,0.003	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0.492:0.585,0.338,0.077	0|0:0.077:0.924,0.076,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.97:0.001,0.027,0.971	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.213:0.799,0.188,0.012	0|0:0.111:0.889,0.11,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.147:0.856,0.141,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0.276:0.745,0.234,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.008,0	0|0:0:1,0,0	1|1:1.591:0.062,0.285,0.653	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.005:0.995,0.005,0	1|1:1.971:0,0.029,0.971	1|1:2:0,0,1	1|1:1.877:0.003,0.118,0.88	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.918:0.002,0.078,0.92	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	1|1:1.903:0.002,0.092,0.906	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.931:0.002,0.065,0.933	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.945:0,0.054,0.946	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.965:0,0.034,0.965	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.252:0.765,0.218,0.017	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17180994	SNP-3.17179803.	A	G	.	PASS	AR2=0.944;DR2=0.961;AF=0.278	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.46:0.075,0.391,0.535	1|1:1.512:0.059,0.37,0.571	1|1:1.574:0.048,0.331,0.622	1|1:2:0,0,1	1|1:1.647:0.029,0.295,0.676	0|1:1.172:0.177,0.473,0.35	0|0:0:1,0,0	0|0:1.108:0.222,0.448,0.33	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.399:0.083,0.434,0.482	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.37:0.087,0.456,0.457	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.82:0.01,0.159,0.83	0|0:0:1,0,0	0|1:0.883:0.375,0.368,0.257	1|1:1.844:0.004,0.148,0.848	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.103:0.212,0.473,0.315	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.606:0.039,0.316,0.645	1|1:1.891:0.004,0.1,0.896	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.816:0.008,0.169,0.824	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.435:0.09,0.385,0.525	1|1:2:0,0,1	1|1:1.939:0.001,0.058,0.941	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.925:0.001,0.073,0.926	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.49:0.059,0.392,0.549	1|1:2:0,0,1	1|1:1.582:0.047,0.324,0.629	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.635:0.035,0.294,0.671	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.679:0.032,0.256,0.712	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.778:0.016,0.19,0.794	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.575:0.048,0.33,0.623	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.841:0.011,0.138,0.851	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17185798	SNP-3.17184607.	C	A	.	PASS	AR2=0.979;DR2=0.983;AF=0.366	GT:DS:GP	0|0:0.091:0.914,0.082,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.954,0.046,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.136:0.866,0.132,0.002	0|0:0:1,0,0	0|0:0.138:0.864,0.134,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.365:0.665,0.305,0.03	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.539:0.518,0.425,0.057	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.079:0.923,0.076,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0.003:0.997,0.003,0	0|0:0.021:0.979,0.02,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.006:0.994,0.006,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0.043:0.959,0.04,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.257:0.797,0.149,0.054	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.954,0.045,0.001	0|0:0:1,0,0	0|0:0.15:0.859,0.132,0.009	0|0:0.064:0.937,0.061,0.002	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0.033:0.968,0.031,0.001	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0.047:0.953,0.046,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.057:0.944,0.055,0.001	1|1:1.942:0,0.058,0.942	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.949:0.001,0.05,0.95	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.967:0,0.033,0.967	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.953,0.046,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.577:0.459,0.506,0.035	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.121:0.886,0.107,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.224:0.785,0.205,0.01	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.118:0.89,0.101,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.138:0.87,0.122,0.008	0|0:0.118:0.886,0.11,0.004	0|0:0:1,0,0	0|0:0.253:0.769,0.209,0.022	0|0:0.296:0.727,0.25,0.023	0|0:0.137:0.863,0.136,0.001	0|0:0.101:0.902,0.095,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.984:0,0.015,0.984	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.052:0.949,0.05,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.003:0.997,0.003,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17188092	SNP-3.17186901.	C	A	.	PASS	AR2=0.997;DR2=0.997;AF=0.412	GT:DS:GP	0|0:0.114:0.895,0.096,0.009	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.689:0.058,0.194,0.748	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.019:0.981,0.018,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.049:0.951,0.048,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.958,0.042,0.001	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.961,0.039,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17190109	SNP-3.17188918.	C	A	.	PASS	AR2=0.937;DR2=0.948;AF=0.267	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.304:0,0.696,0.304	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.908:0.002,0.088,0.91	0|1:1:0.237,0.527,0.237	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.777:0.024,0.174,0.801	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.132:0.184,0.501,0.316	1|1:2:0,0,1	1|1:1.574:0.055,0.316,0.629	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:0.841:0.405,0.348,0.247	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.182:0.169,0.479,0.352	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.043:0.958,0.041,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.12:0.891,0.099,0.011	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.613:0.405,0.578,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.812:0.3,0.589,0.111	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.953,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.022:0.979,0.02,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.507:0.074,0.345,0.581	0|0:0:1,0,0	0|1:1.017:0.24,0.502,0.258	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.254:0.747,0.252,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.157:0.21,0.423,0.367	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.103:0.899,0.099,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.067:0.934,0.064,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.162:0.178,0.481,0.341	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.154:0.181,0.484,0.335	1|1:2:0,0,1	0|1:1.219:0.155,0.471,0.374	1|1:2:0,0,1	1|0:1.015:0.225,0.534,0.24	1|0:1.204:0.16,0.475,0.364	0|1:1.227:0.152,0.469,0.379	1|1:1.204:0.16,0.475,0.364	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.237:0.148,0.467,0.385	0|0:0.02:0.98,0.019,0.001	1|1:2:0,0,1	1|0:1.229:0.151,0.468,0.381	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17190292	SNP-3.17189101.	A	G	.	PASS	AR2=0.965;DR2=0.973;AF=0.366	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.971:0,0.029,0.971	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.783:0.333,0.551,0.116	0|0:0:1,0,0	0|0:0.395:0.645,0.314,0.04	0|0:0:1,0,0	0|0:0.244:0.777,0.202,0.021	0|0:0:1,0,0	1|0:0.634:0.441,0.484,0.075	0|0:0:1,0,0	1|0:0.676:0.454,0.417,0.13	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.365:0.666,0.303,0.031	1|1:2:0,0,1	0|0:0.14:0.863,0.134,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.123:0.879,0.118,0.002	0|0:0.227:0.794,0.186,0.021	0|0:0.17:0.836,0.158,0.006	0|0:0.212:0.802,0.185,0.013	1|1:2:0,0,1	0|1:0.871:0.33,0.468,0.201	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.86:0.008,0.124,0.868	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.319:0.709,0.263,0.028	0|0:0.647:0.458,0.438,0.104	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.812:0.019,0.15,0.831	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.788:0.365,0.483,0.153	0|0:0:1,0,0	1|0:1.096:0.112,0.68,0.208	1|1:2:0,0,1	0|0:0.058:0.942,0.058,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.137:0.871,0.121,0.008	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.976:0,0.024,0.976	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.173:0.836,0.155,0.009	0|0:0.295:0.722,0.26,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.971,0.028,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0,0.032,0.968	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.967:0,0.032,0.967	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.11:0.893,0.104,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:1.98:0,0.019,0.981	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.074:0.928,0.071,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17194160	SNP-3.17192969.	C	A	.	PASS	AR2=0.95;DR2=0.963;AF=0.443	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.499:0.09,0.321,0.589	1|1:1.79:0.019,0.171,0.81	0|0:0.357:0.667,0.309,0.024	0|0:0:1,0,0	0|1:0.669:0.331,0.669,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.112:0.893,0.102,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.889:0.323,0.465,0.212	0|0:0.021:0.979,0.02,0	1|1:1.716:0.026,0.232,0.742	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.179:0.231,0.36,0.41	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.042:0.221,0.517,0.263	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.182:0.83,0.159,0.011	0|0:0.323:0.716,0.245,0.039	0|0:0:1,0,0	0|0:0.608:0.533,0.326,0.141	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.958,0.041,0.002	1|1:2:0,0,1	0|0:0.147:0.859,0.134,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.25:0.769,0.212,0.019	0|0:0.249:0.762,0.226,0.012	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.98:0.001,0.019,0.98	1|1:2:0,0,1	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:1.818:0.01,0.162,0.828	1|1:1.674:0.038,0.249,0.712	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.952:0.001,0.047,0.952	1|1:1.985:0,0.014,0.985	1|1:1.873:0.002,0.122,0.875	1|1:1.863:0.005,0.127,0.868	1|1:2:0,0,1	1|1:1.987:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.894:0.003,0.1,0.897	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.976:0,0.024,0.976	1|1:1.949:0.001,0.049,0.95	1|1:1.886:0.006,0.101,0.893	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.51:0.558,0.374,0.068	0|0:0.153:0.855,0.137,0.008	0|0:0:1,0,0	1|1:1.975:0.001,0.024,0.976	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.098:0.904,0.094,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.117:0.887,0.11,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.39:0.658,0.295,0.047	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.152:0.855,0.138,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.112:0.891,0.106,0.003	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.145:0.184,0.488,0.328	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.219:0.792,0.198,0.01	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.796:0.041,0.122,0.837	1|0:0.628:0.499,0.374,0.127	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.522:0.53,0.419,0.051	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17194174	SNP-3.17192983.	C	A	.	PASS	AR2=0.859;DR2=0.89;AF=0.261	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.192:0.128,0.552,0.32	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.114:0.891,0.105,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.95,0.049,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.217:0.792,0.199,0.009	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.068:0.16,0.612,0.228	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.123:0.156,0.565,0.279	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.342:0.701,0.257,0.042	1|1:1.469:0.068,0.395,0.537	0|0:0:1,0,0	0|1:0.993:0.249,0.508,0.242	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.605:0.495,0.406,0.099	1|1:2:0,0,1	0|1:1.052:0.228,0.492,0.28	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.237:0.149,0.465,0.386	0|0:0:1,0,0	0|1:1.011:0.248,0.493,0.259	0|0:0.34:0.736,0.189,0.076	0|1:0.941:0.282,0.495,0.223	0|0:0:1,0,0	0|0:0.215:0.801,0.182,0.017	1|1:1.454:0.085,0.376,0.539	1|1:2:0,0,1	0|0:1.043:0.259,0.438,0.302	0|0:0.784:0.37,0.475,0.155	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.075:0.927,0.071,0.002	0|1:1.212:0.15,0.488,0.362	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.945,0.053,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.085:0.916,0.082,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.559:0.526,0.39,0.084	0|0:0:1,0,0	0|1:0.73:0.395,0.481,0.125	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.528:0.592,0.288,0.12	0|1:0.559:0.517,0.407,0.076	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.141:0.866,0.128,0.007	0|0:0.3:0.732,0.236,0.032	0|0:0:1,0,0	0|0:0.566:0.523,0.389,0.088	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.698:0.433,0.435,0.132	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.855:0.319,0.506,0.175	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.194:0.82,0.167,0.013	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.366:0.674,0.286,0.04	1|0:0.872:0.222,0.684,0.094	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.68:0.441,0.437,0.122	0|0:0.723:0.408,0.461,0.131	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.7:0.354,0.593,0.053	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.589:0.496,0.419,0.085	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.032:0.236,0.497,0.267	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.221:0.796,0.187,0.017	0|0:0.018:0.982,0.018,0	0|0:0.024:0.976,0.023,0.001	1|1:2:0,0,1	0|0:0.09:0.92,0.07,0.01	0|0:0:1,0,0	0|0:0.219:0.81,0.162,0.029	0|1:0.681:0.438,0.442,0.12	0|0:0:1,0,0	0|1:0.813:0.366,0.455,0.179	0|1:0.583:0.516,0.384,0.099	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.082:0.92,0.079,0.001	0|0:0.325:0.71,0.254,0.036	0|0:0.428:0.609,0.354,0.037	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.301:0.128,0.443,0.429	1|1:2:0,0,1	1|0:0.442:0.616,0.326,0.058	0|0:0:1,0,0	0|1:0.951:0.269,0.511,0.22	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.421:0.634,0.312,0.054	1|1:2:0,0,1	0|1:1.299:0.129,0.443,0.428	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.34:0.126,0.408,0.466	0|0:0:1,0,0	0|0:0:1,0,0
+3	17197639	SNP-3.17196448.	C	A	.	PASS	AR2=0.978;DR2=0.986;AF=0.323	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.927:0.002,0.068,0.929	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.296:0.153,0.397,0.45	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.497:0.504,0.496,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.131:0.872,0.125,0.003	0|0:0.011:0.989,0.011,0	1|1:1.679:0.004,0.314,0.682	0|0:0.246:0.773,0.209,0.019	0|0:0.337:0.694,0.276,0.031	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.346:0.114,0.427,0.459	1|1:1.901:0.001,0.098,0.901	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.963:0,0.037,0.963	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.889:0.004,0.104,0.892	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.285:0.736,0.243,0.021	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.702:0.012,0.273,0.715	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.957:0,0.043,0.957	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.95:0.002,0.046,0.952	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.947,0.052,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.941:0.001,0.056,0.943	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17198765	SNP-3.17197574.	C	A	.	PASS	AR2=0.998;DR2=0.999;AF=0.351	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.943:0.002,0.054,0.945	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.386:0.002,0.609,0.389	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17199644	SNP-3.17198453.	C	A	.	PASS	AR2=0.992;DR2=0.993;AF=0.351	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.853:0.006,0.135,0.859	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.848:0.007,0.138,0.855	1|1:2:0,0,1	1|1:1.827:0.009,0.155,0.836	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.762:0.012,0.213,0.775	1|1:2:0,0,1	1|1:1.899:0.003,0.095,0.902	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.756:0.024,0.195,0.781	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.857:0.005,0.133,0.862	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.945:0.001,0.054,0.945	1|1:2:0,0,1	1|1:1.947:0.001,0.05,0.948	1|1:2:0,0,1	1|1:1.923:0.001,0.074,0.925	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.795:0.008,0.189,0.803	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.886:0.004,0.107,0.889	0|0:0:1,0,0
+3	17199966	SNP-3.17198775.	A	G	.	PASS	AR2=1;DR2=1;AF=0.403	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17201134	SNP-3.17199943.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.401	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.999:0.071,0.859,0.07	1|1:2:0,0,1	1|0:0.772:0.228,0.772,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.147:0,0.853,0.147	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17202901	SNP-3.17201710.	A	G	.	PASS	AR2=0.992;DR2=0.993;AF=0.219	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.864:0.006,0.123,0.87	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.831:0.006,0.156,0.838	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.95,0.05,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.088:0.915,0.083,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.938,0.06,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.857:0,0.143,0.857	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.033,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.925:0.002,0.07,0.928	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.91:0,0.09,0.91	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.94,0.059,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.729:0.014,0.242,0.744	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.948,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17204094	SNP-3.17202903.	C	A	.	PASS	AR2=0.989;DR2=0.991;AF=0.385	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.3:0.722,0.255,0.023	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.93:0.002,0.066,0.932	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.331:0.011,0.647,0.342	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.967:0.001,0.032,0.967	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.629:0.014,0.343,0.643	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.977:0,0.022,0.977	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.513:0.077,0.333,0.59	1|1:1.961:0.001,0.038,0.961	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.967:0,0.032,0.968	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.928,0.071,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.924:0.002,0.072,0.926	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.08:0.921,0.078,0.001	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.974:0,0.026,0.974	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.948:0.001,0.051,0.949	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.967:0,0.032,0.968	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.074:0.928,0.071,0.002	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.95,0.049,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:1.987:0,0.012,0.987	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17206153	SNP-3.17204962.	A	G	.	PASS	AR2=0.997;DR2=0.997;AF=0.212	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.946:0,0.053,0.947	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.127:0.143,0.586,0.271	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17206800	SNP-3.17205609.	A	G	.	PASS	AR2=0.851;DR2=0.885;AF=0.292	GT:DS:GP	0|0:0.152:0.858,0.132,0.01	0|0:0:1,0,0	0|0:0.043:0.957,0.043,0	0|0:0.053:0.948,0.05,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.233:0.767,0.233,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.276:0.106,0.511,0.382	1|1:2:0,0,1	1|1:1.982:0,0.017,0.982	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.47:0.635,0.26,0.105	0|0:0.192:0.822,0.163,0.015	0|1:1.083:0.191,0.536,0.274	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.11:0,0.89,0.11	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.493:0.558,0.391,0.051	0|0:0:1,0,0	1|0:1.159:0.16,0.521,0.319	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.108:0.236,0.42,0.344	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.361:0.105,0.429,0.466	1|0:0.907:0.339,0.414,0.247	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.072:0.212,0.504,0.284	0|1:1.319:0.123,0.434,0.442	1|1:1.532:0.058,0.352,0.59	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.296:0.729,0.245,0.025	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.499:0.614,0.273,0.113	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.974:0.282,0.462,0.256	1|0:1.316:0.14,0.403,0.457	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.143:0.863,0.132,0.005	0|0:0.212:0.8,0.189,0.011	0|0:0:1,0,0	0|0:0.134:0.873,0.12,0.007	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.118:0.886,0.11,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.287:0.731,0.251,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.969,0.03,0.001	0|0:0.175:0.833,0.159,0.008	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.351:0.683,0.284,0.033	0|0:0:1,0,0	0|1:0.419:0.625,0.331,0.044	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.199:0.124,0.554,0.323	1|0:1.187:0.138,0.536,0.325	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.88:0.323,0.475,0.203	0|0:0.783:0.363,0.49,0.146	0|0:0.128:0.877,0.118,0.005	0|0:0.526:0.523,0.428,0.049	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.516:0.553,0.379,0.069	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.127:0.19,0.494,0.316	1|0:0.528:0.511,0.45,0.039	1|0:0.803:0.35,0.497,0.153	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.402:0.629,0.339,0.032	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.272:0.741,0.245,0.014	0|0:0:1,0,0	0|0:0.604:0.459,0.477,0.063	0|0:0:1,0,0	1|0:1.236:0.084,0.595,0.321	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.52:0.56,0.36,0.08	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.764:0.405,0.427,0.169	1|1:2:0,0,1	0|1:1.112:0.214,0.46,0.326	1|1:2:0,0,1	1|0:0.896:0.281,0.543,0.177	1|0:0.736:0.4,0.464,0.136	0|0:0.681:0.456,0.407,0.137	0|0:0:1,0,0	0|1:0.833:0.327,0.512,0.161	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.177:0.836,0.151,0.013	1|1:1.426:0.088,0.398,0.514	0|0:0:1,0,0	0|0:0.125:0.88,0.114,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.128:0.877,0.119,0.005	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.668:0.47,0.392,0.138	0|0:0:1,0,0	0|1:0.743:0.408,0.441,0.151	0|0:0.533:0.552,0.363,0.085	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.243:0.782,0.193,0.025	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.171:0.838,0.153,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.152:0.854,0.139,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.409:0.093,0.404,0.502	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.189:0.822,0.167,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.163:0.845,0.147,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.235:0.782,0.2,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.494:0.065,0.376,0.559	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17210461	SNP-3.17209270.	C	A	.	PASS	AR2=1;DR2=1;AF=0.399	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17210715	SNP-3.17209524.	A	G	.	PASS	AR2=0.997;DR2=0.997;AF=0.23	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.246:0.766,0.223,0.011	1|0:1:0,1,0	0|0:0.07:0.93,0.069,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.09:0.91,0.09,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.952:0.001,0.046,0.953	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17211215	SNP-3.17210024.	C	A	.	PASS	AR2=0.988;DR2=0.991;AF=0.357	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.919:0,0.081,0.919	1|1:1.907:0.003,0.088,0.91	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.917:0.002,0.079,0.919	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.66:0.023,0.293,0.683	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.654:0.029,0.289,0.682	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.96:0,0.04,0.96	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.961:0.001,0.037,0.962	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.786:0.009,0.196,0.795	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.738:0.015,0.233,0.752	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.945:0.001,0.053,0.946	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.953:0.001,0.045,0.954	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.854:0.016,0.114,0.87	0|0:0:1,0,0	1|1:1.928:0.001,0.07,0.929	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.388:0.078,0.456,0.466	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17211277	SNP-3.17210086.	C	A	.	PASS	AR2=0.99;DR2=0.992;AF=0.396	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.258:0.742,0.258,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.091:0.911,0.086,0.002	0|0:0.105:0.898,0.098,0.003	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.085:0.917,0.081,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.069:0.932,0.068,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.941:0.001,0.057,0.942	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.938:0.001,0.06,0.939	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.049:0.951,0.049,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.962:0,0.037,0.963	0|0:0.156:0.85,0.144,0.006	1|1:2:0,0,1	1|1:1.88:0.001,0.117,0.882	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.566:0.435,0.563,0.002	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.941,0.059,0.001	0|0:0:1,0,0	0|0:0.089:0.913,0.085,0.002	0|0:0.073:0.929,0.07,0.002	0|0:0.115:0.888,0.108,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.095:0.907,0.09,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.943,0.056,0	0|0:0.02:0.98,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.957,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.067:0.935,0.064,0.001	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17211985	SNP-3.17210794.	A	G	.	PASS	AR2=0.997;DR2=0.997;AF=0.392	GT:DS:GP	1|1:1.967:0,0.032,0.968	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.969:0,0.031,0.969	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.131:0.876,0.117,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.982:0,0.018,0.982	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.97,0.03,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.922:0.001,0.076,0.923	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.93:0.001,0.068,0.931	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.937:0.001,0.06,0.938	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.967:0,0.032,0.967	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.036:0.965,0.033,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.964:0,0.036,0.964	1|1:1.976:0,0.023,0.976	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.956:0.001,0.043,0.956	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.956:0,0.043,0.957	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.961:0.001,0.038,0.961	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.027,0.972	0|0:0:1,0,0	1|1:2:0,0,1
+3	17213124	SNP-3.17211933.	C	A	.	PASS	AR2=0.997;DR2=0.997;AF=0.367	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.848:0.003,0.145,0.852	1|1:2:0,0,1	0|0:0.019:0.981,0.018,0	1|1:2:0,0,1	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1	1|1:1.912:0.003,0.082,0.915	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.767:0.011,0.211,0.778	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.941:0.001,0.058,0.942	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.015:0.985,0.014,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.012:0.989,0.011,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.02:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17213678	SNP-3.17212487.	C	A	.	PASS	AR2=1;DR2=1;AF=0.391	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.078:0.924,0.075,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17217646	SNP-3.17216455.	A	G	.	PASS	AR2=0.893;DR2=0.923;AF=0.299	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1	1|1:1.651:0.012,0.325,0.663	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.702:0.418,0.461,0.12	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.584:0.527,0.362,0.111	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.05:0.952,0.047,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.94:0.28,0.499,0.221	0|0:0.059:0.943,0.055,0.002	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.319:0.711,0.259,0.03	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.505:0.573,0.348,0.078	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.511:0.556,0.377,0.067	0|0:0.41:0.64,0.311,0.049	0|0:0.684:0.449,0.419,0.133	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.579:0.508,0.406,0.087	0|0:0:1,0,0	0|0:0.759:0.419,0.403,0.178	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.539:0.536,0.389,0.075	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.063:0.177,0.582,0.241	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.997:0.232,0.538,0.229	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.519:0.063,0.356,0.581	1|1:1.624:0.039,0.298,0.663	1|1:2:0,0,1	1|1:1.709:0.039,0.213,0.748	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.911:0.339,0.412,0.25	0|0:0.484:0.587,0.341,0.071	0|0:0.239:0.775,0.212,0.013	0|0:0.337:0.693,0.277,0.03	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.193:0.815,0.177,0.008	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.363:0.107,0.423,0.47	1|1:1.75:0.016,0.217,0.766	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.517:0.055,0.373,0.572	0|0:0.121:0.881,0.117,0.002	1|1:2:0,0,1	1|1:1.207:0.115,0.563,0.322	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.135:0.866,0.132,0.002	0|1:1.049:0.144,0.663,0.193	0|0:1.086:0.208,0.497,0.295	0|1:1.404:0.096,0.404,0.5	0|1:1.056:0.242,0.46,0.298	0|1:1.283:0.131,0.455,0.414	1|1:1.674:0.031,0.265,0.705	1|1:1.546:0.052,0.35,0.598	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.618:0.48,0.423,0.098	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.954,0.045,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.877:0.285,0.554,0.161	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.45:0.095,0.36,0.545	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.965,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.471:0.602,0.325,0.073	1|1:2:0,0,1	1|1:1.455:0.083,0.379,0.538	0|0:0:1,0,0	0|0:0.119:0.885,0.111,0.004	1|1:2:0,0,1
+3	17221550	SNP-3.17220359.	C	A	.	PASS	AR2=0.931;DR2=0.946;AF=0.344	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.23:0.787,0.195,0.017	0|1:0.793:0.32,0.567,0.113	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.709:0.42,0.451,0.129	0|0:0:1,0,0	0|0:0.354:0.673,0.301,0.027	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.251:0.764,0.221,0.015	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.897:0.312,0.48,0.209	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.435:0.612,0.341,0.047	0|0:0:1,0,0	0|0:0.172:0.844,0.14,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.935,0.063,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.123:0.883,0.112,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0.199:0.813,0.176,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.102:0.901,0.096,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.187:0.822,0.17,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0.089:0.913,0.084,0.002	0|0:0:1,0,0	0|0:0.08:0.922,0.075,0.002	0|0:0.077:0.925,0.073,0.002	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0.084:0.918,0.079,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.908:0.003,0.086,0.911	1|1:2:0,0,1	1|1:1.892:0.004,0.101,0.895	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.342:0.702,0.254,0.044	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.295:0.096,0.512,0.392	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.948:0,0.052,0.948	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.618:0.039,0.304,0.657	1|1:2:0,0,1	1|1:1.769:0.011,0.21,0.78	0|0:0:1,0,0	0|1:1.356:0.03,0.583,0.387	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.785:0.01,0.195,0.795	1|1:1.466:0.074,0.387,0.54	0|0:0:1,0,0	0|0:0.041:0.961,0.037,0.002	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.506:0.043,0.407,0.55	1|1:2:0,0,1	1|1:1.723:0.021,0.236,0.743	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.166:0.841,0.152,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.182:0.826,0.166,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.083:0.919,0.078,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.193:0.818,0.172,0.011	0|0:0.152:0.855,0.138,0.007	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0.398:0.662,0.277,0.06	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.091:0.911,0.087,0.002	0|0:0.118:0.885,0.111,0.003	0|0:0.112:0.891,0.106,0.003	0|0:0.162:0.844,0.149,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.148:0.859,0.134,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.629:0.415,0.541,0.044	1|1:2:0,0,1	0|0:0.091:0.911,0.086,0.002	1|1:2:0,0,1	0|0:0.109:0.894,0.103,0.003	1|1:2:0,0,1	0|0:0.121:0.882,0.114,0.004	0|1:1.625:0.014,0.348,0.639	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.964,0.036,0	0|0:0:1,0,0	0|0:0.265:0.754,0.228,0.019	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.166:0.841,0.152,0.007	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.661:0.036,0.267,0.697	0|0:0:1,0,0	1|0:1.368:0.071,0.49,0.439	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.833:0.009,0.149,0.842	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.715:0.431,0.423,0.146	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.155:0.851,0.144,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0.158:0.849,0.145,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.964:0.001,0.035,0.965	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.975:0,0.024,0.975	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.886:0.002,0.11,0.888	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.723:0.023,0.231,0.746	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.159:0.848,0.146,0.007	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17228574	SNP-3.17227383.	A	G	.	PASS	AR2=0.825;DR2=0.861;AF=0.265	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.399:0.09,0.421,0.489	0|0:0:1,0,0	1|0:0.643:0.445,0.468,0.088	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.531:0.071,0.328,0.602	0|0:0:1,0,0	1|1:1.417:0.088,0.408,0.505	0|1:0.756:0.389,0.467,0.144	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.166:0.171,0.492,0.337	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.197:0.156,0.49,0.353	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.508:0.552,0.389,0.059	1|0:0.546:0.533,0.389,0.078	0|0:0:1,0,0	0|0:0.704:0.438,0.419,0.143	1|1:2:0,0,1	0|0:0.482:0.528,0.462,0.01	0|0:0.15:0.858,0.133,0.009	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.664:0.452,0.432,0.116	1|1:2:0,0,1	0|1:0.756:0.389,0.467,0.145	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.785:0.368,0.479,0.153	0|0:0.599:0.498,0.405,0.097	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.696:0.428,0.448,0.124	0|1:0.764:0.383,0.471,0.146	0|0:0:1,0,0	0|1:0.711:0.417,0.455,0.128	1|1:0.748:0.396,0.459,0.145	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.812:0.354,0.481,0.166	0|0:0.842:0.338,0.483,0.179	1|1:2:0,0,1	0|1:0.789:0.369,0.473,0.158	0|1:0.774:0.378,0.471,0.152	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.766:0.382,0.469,0.148	0|0:0:1,0,0	0|1:0.775:0.379,0.467,0.154	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.497:0.597,0.309,0.094	1|0:0.764:0.383,0.471,0.147	0|0:0:1,0,0	0|0:0.778:0.373,0.475,0.152	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.296:0.129,0.447,0.425	1|1:1.418:0.089,0.404,0.507	0|0:0.764:0.39,0.456,0.154	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.63:0.473,0.424,0.103	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.681:0.438,0.443,0.119	0|0:0.721:0.41,0.459,0.131	0|0:0.762:0.383,0.472,0.145	0|0:0:1,0,0	1|0:0.754:0.389,0.467,0.143	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.585:0.044,0.328,0.628	0|0:0:1,0,0	0|1:1.096:0.204,0.495,0.301	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.758:0.389,0.463,0.147	0|0:0:1,0,0	0|0:0.728:0.407,0.458,0.135	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.705:0.419,0.457,0.124	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.741:0.412,0.435,0.153	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.769:0.382,0.467,0.151	1|1:2:0,0,1	0|0:0.873:0.317,0.492,0.191	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.628:0.044,0.284,0.672	0|1:1.601:0.04,0.318,0.642	0|0:0:1,0,0	0|0:0.754:0.397,0.453,0.15	1|0:0.868:0.326,0.48,0.194	1|1:1.462:0.076,0.386,0.538	0|0:0:1,0,0	0|0:0.809:0.357,0.477,0.166	1|1:2:0,0,1	0|1:1.28:0.144,0.432,0.424	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.618:0.471,0.44,0.089	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.858:0.327,0.487,0.185	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.784:0.372,0.471,0.156	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	17229925	SNP-3.17228734.	C	A	.	PASS	AR2=0.885;DR2=0.901;AF=0.231	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.081:0.922,0.075,0.003	0|0:0.025:0.975,0.025,0	0|0:0.164:0.842,0.152,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.263:0.755,0.228,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.288:0.73,0.253,0.018	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.195:0.815,0.175,0.01	0|0:0:1,0,0	0|0:0.028:0.973,0.027,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.202:0.16,0.479,0.361	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.79:0.305,0.6,0.095	0|1:0.83:0.338,0.494,0.168	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.811:0.356,0.476,0.168	1|0:0.848:0.336,0.479,0.184	1|0:0.91:0.301,0.489,0.21	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.705:0.422,0.452,0.126	1|1:2:0,0,1	1|0:0.98:0.217,0.586,0.197	0|0:0:1,0,0	0|0:0.267:0.754,0.224,0.021	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.183:0.168,0.481,0.351	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.782:0.359,0.5,0.141	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.106:0.898,0.099,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.198:0.808,0.186,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.054:0.23,0.486,0.284	1|0:1.012:0.205,0.577,0.217	0|0:0:1,0,0	0|1:0.884:0.299,0.519,0.182	0|0:0:1,0,0	0|0:0.702:0.422,0.454,0.124	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.127:0.88,0.114,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.225:0.786,0.204,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.826:0.337,0.5,0.163	0|1:1.023:0.214,0.549,0.237	0|0:0:1,0,0	0|1:1.176:0.171,0.482,0.347	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.67:0.469,0.392,0.139	0|0:0.127:0.878,0.117,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.739:0.393,0.475,0.132	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.862:0.322,0.494,0.184	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.78:0.369,0.482,0.149	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.197:0.815,0.173,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.311:0.714,0.26,0.026	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.537:0.542,0.379,0.079	1|0:0.882:0.303,0.513,0.185	1|1:0.929:0.293,0.485,0.222	0|0:0:1,0,0	0|0:0.429:0.595,0.381,0.024	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.67:0.447,0.436,0.117	0|1:0.924:0.289,0.497,0.213	1|1:2:0,0,1	0|0:0.986:0.28,0.454,0.266	0|0:0.853:0.335,0.477,0.188	0|0:0.051:0.951,0.046,0.002	1|0:0.776:0.378,0.468,0.154	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.906,0.091,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17236363	SNP-3.17235172.	C	A	.	PASS	AR2=0.971;DR2=0.978;AF=0.341	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.04:0.96,0.039,0	0|0:0:1,0,0	1|1:1.46:0.065,0.409,0.525	0|1:1:0,1,0	0|0:0.052:0.948,0.052,0	0|0:0:1,0,0	0|0:0.109:0.898,0.095,0.007	0|0:0.14:0.865,0.13,0.005	0|0:0.135:0.875,0.115,0.01	0|1:1:0,1,0	1|1:1.871:0.004,0.121,0.875	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.083:0.918,0.082,0.001	1|1:1.853:0.006,0.134,0.86	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.717:0.017,0.249,0.734	0|0:0.182:0.833,0.151,0.015	0|0:0.058:0.943,0.056,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.051:0.95,0.05,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.958,0.041,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.954,0.045,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1.309:0.115,0.461,0.424	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.799:0.001,0.199,0.8	0|1:1:0,1,0	1|1:1.563:0.044,0.348,0.607	1|1:2:0,0,1	1|1:1.8:0.007,0.186,0.807	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.562:0.033,0.372,0.595	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.883:0.005,0.106,0.888	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.042:0.958,0.042,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.16:0.852,0.136,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.104:0.899,0.098,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.932,0.067,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.957,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.969,0.03,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.019:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.377:0.1,0.424,0.477	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.829:0.01,0.151,0.839	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.866:0.009,0.116,0.875	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	17236799	SNP-3.17235608.	A	G	.	PASS	AR2=0.896;DR2=0.922;AF=0.489	GT:DS:GP	1|1:1.628:0.032,0.308,0.66	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.183:0.166,0.484,0.349	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.86:0.013,0.114,0.873	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.482:0.069,0.38,0.551	1|1:1.858:0.006,0.131,0.863	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.971:0,0.029,0.971	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.704:0.017,0.262,0.721	1|1:2:0,0,1	1|1:1.748:0.018,0.217,0.765	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.783:0.014,0.188,0.797	1|1:1.704:0.021,0.254,0.725	1|1:1.493:0.059,0.389,0.552	0|1:1.412:0.088,0.412,0.5	1|1:2:0,0,1	1|1:1.569:0.054,0.323,0.623	0|1:0.999:0.296,0.408,0.296	0|1:1:0,1,0	1|1:1.645:0.032,0.291,0.677	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.704:0.022,0.253,0.725	1|1:1.637:0.036,0.291,0.673	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.688:0.024,0.263,0.713	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.431:0.082,0.404,0.513	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1.219:0.156,0.468,0.375	1|1:2:0,0,1	1|1:1.691:0.023,0.264,0.713	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.643:0.033,0.291,0.676	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.964:0.26,0.515,0.224	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.736:0.014,0.237,0.75	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.609:0.042,0.306,0.652	1|0:1:0,1,0	0|1:1.558:0.041,0.36,0.599	1|1:2:0,0,1	1|1:1.975:0.001,0.023,0.976	1|0:1.645:0.03,0.294,0.676	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.89:0.003,0.103,0.893	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.926:0.004,0.067,0.929	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.405:0.067,0.462,0.472	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.456:0.075,0.394,0.531	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.48:0.062,0.395,0.543	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.773:0.013,0.2,0.787	1|1:2:0,0,1	0|1:1.187:0.245,0.322,0.432	0|0:0.368:0.658,0.315,0.026	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.483:0.065,0.387,0.548	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.686:0.026,0.262,0.712	1|1:2:0,0,1	1|1:1.593:0.041,0.326,0.634	1|1:1.52:0.063,0.355,0.583	0|0:0.271:0.749,0.231,0.02	1|1:1.752:0.016,0.215,0.768	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.475:0.072,0.382,0.547	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.535:0.056,0.354,0.59	0|0:0:1,0,0	1|1:1.593:0.038,0.33,0.631	1|0:1.324:0.118,0.44,0.442	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.815:0.009,0.167,0.824	0|0:0:1,0,0	1|0:0.619:0.488,0.405,0.107	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.918:0.001,0.08,0.919	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.903:0.003,0.091,0.906	1|1:1.109:0.219,0.452,0.329	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.698:0.017,0.268,0.715	1|1:1.763:0.014,0.209,0.777	1|1:1.701:0.006,0.286,0.707	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.693:0.024,0.259,0.717	1|1:1.59:0.042,0.325,0.633	1|1:2:0,0,1	1|1:1.699:0.029,0.242,0.728	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.651:0.031,0.286,0.682	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.883:0.003,0.111,0.886	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17240709	SNP-3.17239518.	A	G	.	PASS	AR2=0.989;DR2=0.991;AF=0.232	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.942:0.002,0.055,0.944	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.214:0.798,0.191,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.195:0.815,0.176,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.084:0.919,0.078,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.441:0.152,0.254,0.593	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.961,0.039,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.945:0.002,0.051,0.947	1|1:1.952:0.001,0.046,0.953	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.091:0.91,0.089,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.162:0.845,0.149,0.007	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17240878	SNP-3.17239687.	A	G	.	PASS	AR2=0.989;DR2=0.99;AF=0.612	GT:DS:GP	1|1:1.98:0,0.02,0.98	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.828:0,0.172,0.828	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.815:0,0.185,0.815	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.811:0,0.189,0.811	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:1.983:0,0.017,0.983	1|1:2:0,0,1	1|1:1.805:0,0.195,0.805	1|1:2:0,0,1	1|1:1.948:0.001,0.051,0.949	1|1:2:0,0,1	1|1:1.948:0.001,0.05,0.949	1|1:1.915:0.002,0.08,0.918	1|1:2:0,0,1	1|1:1.96:0.001,0.038,0.961	1|1:1.945:0.001,0.054,0.945	1|1:1.935:0.001,0.063,0.936	1|1:1.956:0,0.044,0.956	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.971:0,0.029,0.971	1|1:1.931:0.001,0.066,0.933	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0,0.024,0.975	1|1:2:0,0,1	1|1:1.961:0,0.038,0.961	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.955:0.001,0.044,0.956	1|1:2:0,0,1	1|1:1.914:0.002,0.081,0.916	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.952:0.001,0.047,0.952	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.932:0.001,0.065,0.934	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.976:0,0.023,0.976	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.953:0,0.047,0.953	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0	1|1:1.93:0.001,0.068,0.931	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.933:0.001,0.064,0.935	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.951:0.001,0.048,0.952	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.989:0,0.011,0.989	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.88:0,0.12,0.88	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.964:0,0.036,0.964	0|0:0:1,0,0	1|1:1.973:0,0.027,0.973	1|1:2:0,0,1	1|1:1.967:0,0.033,0.967	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.964:0,0.035,0.964	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.948:0.001,0.05,0.949	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.026,0.974	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.028,0.972	1|1:2:0,0,1	1|1:1.88:0.003,0.113,0.883	1|1:1.965:0,0.035,0.965	1|1:1.973:0,0.027,0.973	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.946:0.001,0.053,0.946	1|1:1.936:0.001,0.062,0.937	1|1:2:0,0,1	1|1:1.915:0.002,0.08,0.917	0|0:0:1,0,0	1|1:2:0,0,1
+3	17248594	SNP-3.17247403.	C	A	.	PASS	AR2=0.996;DR2=0.996;AF=0.357	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.963:0.001,0.036,0.964	1|1:1.921:0.002,0.075,0.923	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.986:0,0.013,0.986	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.908:0.003,0.087,0.911	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0.001:0.999,0.001,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.955:0,0.045,0.955	1|1:2:0,0,1	0|0:0.074:0.928,0.071,0.002	1|1:1.948:0.001,0.05,0.949	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.834:0,0.166,0.834	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.976:0,0.023,0.977	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.959:0.001,0.039,0.96	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.027,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17251999	SNP-3.17250808.	C	A	.	PASS	AR2=0.974;DR2=0.98;AF=0.327	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.792:0.011,0.186,0.803	1|1:1.774:0.013,0.201,0.787	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.753:0.015,0.218,0.767	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.757:0.014,0.215,0.771	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.623:0.038,0.302,0.66	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.92:0.003,0.075,0.923	1|1:1.603:0.037,0.323,0.64	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.608:0.039,0.314,0.647	1|1:2:0,0,1	1|1:1.63:0.033,0.304,0.663	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.736:0.013,0.237,0.749	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.876:0.002,0.12,0.878	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.781:0.012,0.194,0.794	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.691:0.014,0.281,0.705	1|1:1.641:0.033,0.294,0.673	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.606:0.032,0.329,0.639	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.927:0,0.072,0.928	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.026,0.973	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.903:0.005,0.086,0.909	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:1.973:0,0.027,0.973	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.674:0.036,0.254,0.71	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.633:0.028,0.311,0.661	0|0:0:1,0,0
+3	17253025	SNP-3.17251834.	A	G	.	PASS	AR2=0.849;DR2=0.885;AF=0.325	GT:DS:GP	0|1:1.549:0.047,0.358,0.595	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.401:0.639,0.32,0.04	1|1:1.554:0.045,0.356,0.599	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.286:0.721,0.272,0.007	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.905:0.276,0.542,0.181	1|1:2:0,0,1	1|1:1.754:0.006,0.234,0.76	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.844:0.316,0.524,0.16	1|1:1.803:0.011,0.176,0.814	0|0:0.31:0.714,0.261,0.024	0|0:0.633:0.471,0.426,0.103	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.284:0.737,0.242,0.021	0|0:0.278:0.732,0.258,0.01	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.422:0.623,0.332,0.045	1|1:1.176:0.165,0.494,0.341	0|0:0.383:0.656,0.305,0.039	0|0:0:1,0,0	0|0:0:1,0,0	1|1:0.937:0.245,0.572,0.182	0|0:0:1,0,0	0|1:0.906:0.201,0.692,0.107	0|0:0.405:0.637,0.321,0.042	0|0:0:1,0,0	1|1:1.651:0.032,0.284,0.683	0|0:0:1,0,0	1|1:1.654:0.031,0.283,0.686	1|1:1.648:0.03,0.292,0.678	0|0:0.428:0.619,0.333,0.048	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.759:0.019,0.203,0.778	0|0:0:1,0,0	1|1:1.465:0.074,0.388,0.539	1|1:1.599:0.04,0.321,0.639	0|0:0:1,0,0	0|0:0.328:0.695,0.281,0.023	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.623:0.034,0.309,0.657	0|0:0.412:0.631,0.326,0.043	1|0:0.972:0.271,0.487,0.242	1|1:2:0,0,1	0|0:0.495:0.568,0.369,0.063	0|1:0.489:0.573,0.366,0.061	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.585:0.039,0.336,0.624	0|0:0.513:0.535,0.417,0.048	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.696:0.017,0.27,0.713	0|0:0:1,0,0	0|1:0.535:0.548,0.369,0.083	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.623:0.061,0.255,0.684	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.366:0.667,0.299,0.034	0|0:0.345:0.682,0.29,0.028	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.546:0.051,0.352,0.597	1|1:2:0,0,1	1|1:1.589:0.042,0.326,0.631	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.744:0.017,0.222,0.761	0|0:0.316:0.71,0.264,0.026	1|1:1.426:0.083,0.409,0.508	0|0:0.127:0.876,0.121,0.003	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.223:0.14,0.498,0.363	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.729:0.016,0.24,0.744	0|0:0:1,0,0	0|1:1.428:0.018,0.536,0.446	0|1:0.741:0.386,0.488,0.127	0|1:1.448:0.077,0.398,0.525	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.207:0.139,0.514,0.346	0|0:0:1,0,0	1|1:1.39:0.09,0.431,0.479	1|0:1.527:0.047,0.379,0.574	1|1:2:0,0,1	1|0:1.184:0.145,0.526,0.329	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.909:0.251,0.59,0.159	1|1:1.533:0.046,0.374,0.58	1|1:1.573:0.046,0.334,0.619	1|1:1.339:0.106,0.448,0.445	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.392:0.093,0.423,0.485	0|1:1.269:0.145,0.441,0.414	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.787:0.244,0.725,0.031	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.637:0.036,0.291,0.673	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.602:0.039,0.32,0.641	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.563:0.048,0.341,0.611	1|1:1.43:0.076,0.419,0.505	1|1:1.65:0.029,0.292,0.679	1|1:1.718:0.03,0.223,0.748	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.438:0.08,0.401,0.518	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.809:0.343,0.505,0.152	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17254178	SNP-3.17252987.	C	A	.	PASS	AR2=0.993;DR2=0.994;AF=0.402	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.235:0.805,0.156,0.039	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.041:0.96,0.039,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.813:0.374,0.44,0.186	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.144:0.861,0.134,0.005	0|0:0:1,0,0	0|0:0.086:0.917,0.08,0.003	0|0:0:1,0,0	0|0:0.202:0.803,0.193,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.132:0.872,0.123,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.975,0.025,0	0|0:0:1,0,0	0|0:0.062:0.939,0.059,0.002	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17255297	SNP-3.17254106.	C	A	.	PASS	AR2=0.988;DR2=0.99;AF=0.379	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.413:0.616,0.356,0.028	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.14:0.865,0.13,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.155:0.851,0.143,0.006	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.162:0.846,0.146,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.196:0.814,0.176,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.194:0.815,0.176,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.195:0.816,0.172,0.011	1|1:2:0,0,1	0|0:0.212:0.8,0.189,0.011	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.213:0.798,0.191,0.011	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.138:0.867,0.129,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.18:0.828,0.164,0.008	1|1:2:0,0,1	0|0:0.175:0.833,0.16,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.222:0.79,0.197,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17257252	SNP-3.17256061.	C	A	.	PASS	AR2=0.976;DR2=0.982;AF=0.41	GT:DS:GP	0|1:1:0,1,0	1|0:1.158:0.186,0.469,0.345	0|1:1.158:0.186,0.469,0.345	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.158:0.186,0.469,0.345	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.071:0.931,0.067,0.002	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.269:0.74,0.25,0.01	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.48:0.56,0.401,0.04	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.606:0.504,0.386,0.11	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.074:0.928,0.071,0.001	0|0:0:1,0,0	0|0:0.549:0.537,0.378,0.086	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.391:0.621,0.366,0.013	0|0:0.146:0.86,0.133,0.007	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.968,0.032,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.122:0.883,0.112,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.573:0.52,0.386,0.094	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17257501	SNP-3.17256310.	A	G	.	PASS	AR2=0.914;DR2=0.927;AF=0.394	GT:DS:GP	1|1:1.721:0.021,0.238,0.741	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.256:0.141,0.463,0.397	1|1:1.715:0.018,0.25,0.733	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.158:0.102,0.637,0.26	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.321:0.104,0.472,0.424	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.232:0.152,0.464,0.384	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.264:0.037,0.662,0.301	0|0:0:1,0,0	1|0:1.31:0.106,0.479,0.415	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.861:0.257,0.625,0.118	0|0:0.176:0.83,0.163,0.007	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.236:0.032,0.7,0.268	1|1:2:0,0,1	1|1:1.954:0.001,0.044,0.955	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.717:0.025,0.233,0.742	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.951:0.285,0.48,0.235	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.921:0.002,0.076,0.922	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.332:0.102,0.464,0.434	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.88:0.002,0.117,0.881	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.811:0.021,0.147,0.832	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.115:0.209,0.467,0.324	1|1:1.686:0.025,0.263,0.711	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.082:0.203,0.512,0.285	0|0:0:1,0,0	0|0:0.686:0.41,0.493,0.096	1|0:0.991:0.262,0.485,0.253	0|0:0:1,0,0	0|1:1.392:0.062,0.484,0.454	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.901:0.001,0.098,0.902	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.184:0.151,0.513,0.335	1|1:1.235:0.122,0.52,0.358	0|0:0:1,0,0	0|1:0.967:0.276,0.482,0.243	1|1:1.313:0.082,0.523,0.395	0|1:0.793:0.383,0.441,0.176	0|0:0:1,0,0	1|1:1.398:0.043,0.516,0.441	0|0:0:1,0,0	1|1:1.639:0.023,0.315,0.662	1|1:1.788:0.005,0.202,0.793	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.913:0.303,0.48,0.216	1|1:1.598:0.071,0.259,0.669	1|1:1.775:0.004,0.218,0.779	1|1:2:0,0,1	1|1:1.546:0.038,0.379,0.584	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.678:0.023,0.275,0.702	1|1:1.447:0.118,0.318,0.565	1|1:2:0,0,1	1|0:0.821:0.333,0.513,0.154	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.96:0,0.039,0.961	1|1:2:0,0,1	1|0:0.974:0.267,0.491,0.241	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.047:0.245,0.463,0.292	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.96:0.001,0.038,0.961	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.188:0.089,0.634,0.277	1|1:2:0,0,1	1|1:1.809:0.009,0.173,0.818	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.769:0.017,0.196,0.786	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.965:0.272,0.491,0.237	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.719:0.379,0.524,0.097	0|0:0.162:0.845,0.148,0.007	0|0:0:1,0,0	0|0:0.176:0.832,0.159,0.008	0|0:0:1,0,0	1|1:2:0,0,1
+3	17257967	SNP-3.17256776.	C	A	.	PASS	AR2=0.981;DR2=0.985;AF=0.408	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.29:0.728,0.254,0.018	0|0:0.155:0.851,0.143,0.006	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.243:0.772,0.213,0.015	0|0:0:1,0,0	0|0:0.077:0.924,0.075,0.001	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.083:0.919,0.08,0.001	0|0:0.042:0.959,0.041,0	0|1:1:0,1,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.246:0.769,0.215,0.015	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.134:0.872,0.123,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.437:0.626,0.311,0.063	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.185:0.828,0.16,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.261:0.756,0.227,0.017	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.216:0.795,0.194,0.011	0|0:0.246:0.769,0.216,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.161:0.847,0.145,0.008	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.179:0.828,0.165,0.007	0|0:0.263:0.755,0.228,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.172:0.835,0.157,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.153:0.853,0.141,0.006	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.007,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.162:0.845,0.149,0.007
+3	17260017	SNP-3.17258826.	A	G	.	PASS	AR2=0.995;DR2=0.996;AF=0.337	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.784:0.009,0.198,0.793	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.925:0.001,0.072,0.927	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.8:0.014,0.172,0.814	0|1:1:0,1,0	1|1:1.862:0.001,0.136,0.863	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.825:0.011,0.153,0.836	1|1:1.922:0.003,0.072,0.925	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.994:0,0.006,0.994	0|1:1:0,1,0	1|1:1.923:0.001,0.074,0.924	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17260323	SNP-3.17259132.	A	G	.	PASS	AR2=1;DR2=1;AF=0.228	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.98:0,0.019,0.98	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17261757	SNP-3.17260566.	A	G	.	PASS	AR2=1;DR2=1;AF=0.251	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17264492	SNP-3.17263301.	A	G	.	PASS	AR2=0.995;DR2=0.995;AF=0.261	GT:DS:GP	0|0:0:1,0,0	1|0:0.955:0.275,0.495,0.23	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	1|0:1:0,1,0	1|1:1.931:0.002,0.065,0.933	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.96:0,0.039,0.96	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.042:0.959,0.041,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.044:0.956,0.043,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.965:0,0.034,0.966	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.026:0.975,0.025,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.957,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17265206	SNP-3.17264015.	C	A	.	PASS	AR2=1;DR2=1;AF=0.354	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.976:0.024,0.976,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.027,0.972	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17266180	SNP-3.17264989.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.27	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.788:0.02,0.173,0.807	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17266653	SNP-3.17265462.	C	A	.	PASS	AR2=0.989;DR2=0.991;AF=0.352	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.9:0.003,0.095,0.902	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.747:0.018,0.217,0.765	0|0:0:1,0,0	1|1:1.512:0.032,0.424,0.544	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.751:0.016,0.217,0.767	1|0:1:0,1,0	1|1:1.963:0,0.036,0.964	0|1:1:0,1,0	1|1:1.804:0.008,0.18,0.812	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.976:0,0.023,0.977	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.92:0.002,0.076,0.922	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.764:0.015,0.207,0.779	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.852:0.009,0.131,0.861	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.812:0.01,0.168,0.822	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.013,0.986	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.016,0.984	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.841:0.007,0.144,0.849	0|0:0:1,0,0
+3	17267380	SNP-3.17266189.	C	A	.	PASS	AR2=1;DR2=1;AF=0.389	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17268078	SNP-3.17266887.	C	A	.	PASS	AR2=0.996;DR2=0.996;AF=0.408	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.274:0.746,0.235,0.02	1|0:1:0,1,0	0|0:0.059:0.942,0.057,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.906,0.092,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.11:0.892,0.107,0.002	0|0:0.161:0.846,0.147,0.007	0|0:0:1,0,0	0|0:0.212:0.799,0.189,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17270402	SNP-3.17269211.	C	A	.	PASS	AR2=0.996;DR2=0.996;AF=0.38	GT:DS:GP	0|0:0.052:0.948,0.051,0	1|1:2:0,0,1	0|1:0.998:0.002,0.998,0	1|1:1.984:0,0.015,0.984	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.998:0.002,0.998,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.939:0.001,0.059,0.94	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.941:0.001,0.057,0.942	0|0:0:1,0,0	1|1:1.953:0,0.046,0.953	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.069:0.932,0.067,0.001	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.05,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.986:0.014,0.986,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.998:0,0.002,0.998	0|1:0.994:0.019,0.968,0.013	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.011,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.13:0.879,0.112,0.009	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.062:0.939,0.06,0.001	0|0:0.039:0.961,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.919:0.001,0.079,0.92	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.964,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.938:0.001,0.06,0.939	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.942,0.057,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.969:0,0.03,0.969	0|0:0:1,0,0
+3	17272125	SNP-3.17270934.	A	G	.	PASS	AR2=0.996;DR2=0.997;AF=0.353	GT:DS:GP	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.906:0.005,0.085,0.911	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.95,0.05,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.969,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.39:0.648,0.313,0.039	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.953:0.001,0.046,0.954	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.921:0.001,0.077,0.922	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.966,0.033,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17273290	SNP-3.17272099.	C	A	.	PASS	AR2=0.97;DR2=0.979;AF=0.311	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.936:0.002,0.061,0.938	1|1:1.926:0.003,0.068,0.929	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.537:0.465,0.532,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.915:0.002,0.081,0.917	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.516:0.039,0.406,0.555	1|1:2:0,0,1	1|0:0.622:0.38,0.617,0.003	1|1:1.858:0.005,0.131,0.863	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.433:0.024,0.519,0.457	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.906:0.002,0.09,0.908	1|1:2:0,0,1	1|1:1.843:0.004,0.15,0.847	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.975:0.126,0.774,0.101	0|1:1.44:0.059,0.442,0.499	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.873:0.008,0.111,0.881	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.813:0.009,0.168,0.822	0|0:0:1,0,0	1|1:1.902:0.003,0.092,0.905	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.549:0.078,0.295,0.627	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.776:0.015,0.195,0.791	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.81:0.015,0.16,0.825	0|1:1:0,1,0	1|1:1.673:0.042,0.244,0.714	1|1:2:0,0,1	1|1:1.907:0.003,0.087,0.91	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.559:0.055,0.332,0.613	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	17273462	SNP-3.17272271.	A	G	.	PASS	AR2=0.978;DR2=0.984;AF=0.225	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.641:0.035,0.29,0.676	1|1:1.772:0.004,0.219,0.777	1|1:1.755:0.016,0.212,0.772	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.445:0.104,0.348,0.548	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.649:0.031,0.289,0.68	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.56:0.05,0.34,0.61	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.646:0.031,0.292,0.677	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.664:0.029,0.278,0.693	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.656:0.031,0.282,0.687	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17275994	SNP-3.17274803.	C	A	.	PASS	AR2=0.99;DR2=0.991;AF=0.419	GT:DS:GP	0|0:0.069:0.932,0.067,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.291:0.722,0.266,0.012	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.093:0.909,0.089,0.002	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.128:0.876,0.12,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.141:0.864,0.13,0.005	0|0:0.167:0.841,0.151,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.095:0.908,0.089,0.003	0|0:0:1,0,0	0|0:0.151:0.853,0.143,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.184:0.823,0.169,0.007	1|1:2:0,0,1	0|0:0.101:0.902,0.095,0.003	0|0:0:1,0,0	0|0:0.2:0.805,0.19,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.946,0.053,0.001	0|0:0.241:0.769,0.221,0.01	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.297:0.741,0.22,0.038	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.025:0.976,0.024,0
+3	17276108	SNP-3.17274917.	A	G	.	PASS	AR2=0.89;DR2=0.916;AF=0.419	GT:DS:GP	1|1:1.889:0.003,0.105,0.892	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.436:0.076,0.411,0.513	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.997:0.212,0.579,0.209	1|1:2:0,0,1	1|0:1.227:0.054,0.664,0.282	0|0:0:1,0,0	0|1:0.732:0.391,0.487,0.123	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.637:0.463,0.438,0.099	0|0:0:1,0,0	1|1:1.514:0.055,0.377,0.568	0|0:0:1,0,0	0|1:0.904:0.283,0.53,0.187	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.883:0.315,0.487,0.198	1|0:1.57:0.023,0.384,0.593	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.031:0.177,0.614,0.209	0|0:0:1,0,0	1|0:1.583:0.029,0.36,0.612	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.917:0.295,0.492,0.213	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.56:0.051,0.338,0.611	1|1:2:0,0,1	1|1:1.577:0.058,0.306,0.636	1|1:2:0,0,1	0|1:1.41:0.088,0.415,0.498	1|1:2:0,0,1	1|1:1.887:0.001,0.111,0.888	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.377:0.037,0.549,0.414	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.569:0.058,0.315,0.627	1|0:1.259:0.143,0.455,0.402	0|1:1.581:0.054,0.31,0.636	1|1:1.888:0.003,0.105,0.891	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.233:0.153,0.46,0.387	1|0:1.255:0.146,0.453,0.401	1|1:1.653:0.031,0.285,0.684	1|1:2:0,0,1	1|1:1.484:0.028,0.461,0.512	1|1:1.558:0.063,0.316,0.621	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.953:0.001,0.046,0.953	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.577:0.447,0.53,0.023	0|0:0:1,0,0	1|1:1.46:0.092,0.357,0.551	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.421:0.086,0.407,0.507	0|0:0:1,0,0	1|1:1.869:0.002,0.127,0.871	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.703:0.022,0.253,0.725	0|0:0:1,0,0	0|1:1.211:0.161,0.466,0.373	0|0:0:1,0,0	1|1:1.917:0.003,0.078,0.919	1|1:1.888:0.003,0.105,0.891	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.71:0.411,0.468,0.121	0|0:0:1,0,0	1|1:1.715:0.023,0.239,0.738	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.367:0.099,0.435,0.466	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.814:0.36,0.467,0.173	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.489:0.065,0.38,0.555	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.883:0.001,0.115,0.884	1|1:1.854:0.004,0.139,0.857	1|0:0.831:0.334,0.5,0.166	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.413:0.634,0.32,0.046	0|0:0.418:0.627,0.328,0.045	1|0:1.132:0.141,0.586,0.273	1|1:1.907:0.001,0.09,0.909	1|1:2:0,0,1	1|1:1.765:0.01,0.214,0.776	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.881:0.007,0.104,0.888	0|0:0:1,0,0	1|1:1.536:0.052,0.361,0.587	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.542:0.532,0.395,0.074	1|1:2:0,0,1	1|1:1.888:0.003,0.105,0.891	1|1:1.885:0.012,0.091,0.897	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.972:0.234,0.561,0.206	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.955:0.001,0.044,0.956	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.508:0.557,0.378,0.065	0|0:0:1,0,0	1|0:0.807:0.343,0.506,0.15	1|1:1.365:0.104,0.427,0.469	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.886:0.315,0.484,0.201	0|0:0:1,0,0	1|1:2:0,0,1
+3	17276840	SNP-3.17275649.	A	G	.	PASS	AR2=0.992;DR2=0.995;AF=0.249	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.327:0.713,0.246,0.04	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.969:0,0.031,0.969	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.474:0.559,0.408,0.033	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.377:0.661,0.302,0.038	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17277250	SNP-3.17276059.	A	G	.	PASS	AR2=0.99;DR2=0.992;AF=0.253	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.188:0.831,0.15,0.019	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.02:0.98,0.02,0	0|0:0.027:0.973,0.026,0	0|0:0.047:0.954,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.123:0.878,0.122,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.691:0.31,0.689,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.342:0.659,0.34,0.001	0|0:0:1,0,0	0|0:0.258:0.743,0.256,0.001	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.45:0.607,0.336,0.057	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.031:0.969,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.999,0.001,0	0|0:0:1,0,0
+3	17278027	SNP-3.17276836.	C	A	.	PASS	AR2=0.956;DR2=0.967;AF=0.288	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.599:0.067,0.268,0.666	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.299:0.125,0.451,0.424	0|0:0:1,0,0	0|1:1.285:0.125,0.464,0.411	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.964:0,0.035,0.965	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	1|1:1.525:0.03,0.414,0.555	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.16:0.172,0.496,0.332	1|1:2:0,0,1	0|1:1.24:0.148,0.463,0.388	0|1:1.293:0.139,0.429,0.432	1|1:2:0,0,1	1|1:1.436:0.066,0.432,0.502	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.54:0.057,0.346,0.597	1|1:1.57:0.02,0.39,0.59	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.306:0.116,0.462,0.422	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.903:0.001,0.094,0.905	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.652:0.015,0.318,0.667	1|1:1.948:0.001,0.051,0.949	1|1:1.694:0.009,0.288,0.703	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.887:0.004,0.105,0.891	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.819:0.004,0.173,0.823	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.984:0,0.015,0.985	1|1:1.95:0.002,0.047,0.952	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.148:0.178,0.497,0.326	0|0:0:1,0,0
+3	17278691	SNP-3.17277500.	A	G	.	PASS	AR2=0.991;DR2=0.993;AF=0.25	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.977:0,0.023,0.977	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	1|1:1.972:0,0.027,0.973	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.945,0.054,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.018:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.933,0.066,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.959,0.04,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.936,0.062,0.001	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.537:0.464,0.535,0.001	0|0:0:1,0,0	1|0:0.673:0.342,0.642,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.195:0.004,0.796,0.199	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.056:0.945,0.053,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.937:0.001,0.061,0.938	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.984:0,0.016,0.984	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.971:0,0.029,0.971	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.031:0.969,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17278757	SNP-3.17277566.	A	G	.	PASS	AR2=1;DR2=1;AF=0.253	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.994:0.006,0.994,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17279274	SNP-3.17278083.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.38	GT:DS:GP	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.077:0.223,0.477,0.3	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17282773	SNP-3.17281582.	A	G	.	PASS	AR2=0.915;DR2=0.937;AF=0.295	GT:DS:GP	1|1:1.817:0.008,0.167,0.825	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.346:0.104,0.446,0.45	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.913:0.009,0.069,0.922	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.328:0.117,0.439,0.445	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.403:0.64,0.317,0.043	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.457:0.048,0.446,0.505	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.438:0.079,0.405,0.517	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.346:0.097,0.46,0.443	0|1:1.25:0.143,0.464,0.393	1|1:1.89:0.004,0.102,0.894	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.521:0.058,0.362,0.579	0|0:0:1,0,0	1|0:0.826:0.347,0.481,0.172	1|1:1.603:0.025,0.347,0.628	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.021:0.241,0.497,0.262	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.868:0.007,0.118,0.875	1|0:1.316:0.125,0.435,0.44	1|1:1.535:0.057,0.351,0.592	0|0:0:1,0,0	1|0:1.091:0.207,0.495,0.298	1|0:1.06:0.222,0.497,0.282	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.674:0.03,0.266,0.704	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.932:0.001,0.065,0.934	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.105:0.898,0.099,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.201:0.165,0.468,0.367	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.952:0.001,0.046,0.953	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.921,0.077,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.46:0.586,0.368,0.046	0|0:0:1,0,0	0|1:1.295:0.101,0.502,0.396	1|1:1.614:0.042,0.302,0.656	1|1:1.48:0.071,0.378,0.551	1|1:1.663:0.021,0.294,0.685	1|1:1.248:0.142,0.468,0.39	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.401:0.64,0.319,0.041	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.561:0.052,0.336,0.613	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.759:0.02,0.201,0.779	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.845:0.005,0.145,0.85	0|0:0:1,0,0	1|1:1.679:0.022,0.278,0.701	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.366:0.095,0.444,0.461	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.885:0.004,0.107,0.889	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.669:0.036,0.26,0.704	0|0:0.458:0.591,0.359,0.049	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17285432	SNP-3.17284241.	A	G	.	PASS	AR2=0.987;DR2=0.988;AF=0.278	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.911:0.255,0.58,0.166	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.999:0.225,0.55,0.225	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.106:0.896,0.101,0.002	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.064:0.936,0.063,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.086:0.916,0.082,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.084:0.918,0.08,0.002	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.094:0.91,0.087,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.306:0.697,0.3,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.06:0.941,0.058,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.914:0.001,0.084,0.915	1|1:1.88:0.005,0.11,0.885	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.022:0.979,0.021,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.309:0.121,0.449,0.43	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.941,0.057,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17287490	SNP-3.17286299.	A	G	.	PASS	AR2=0.95;DR2=0.961;AF=0.312	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.588:0.04,0.332,0.628	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.098:0.905,0.093,0.002	0|0:0:1,0,0	0|0:0.098:0.905,0.093,0.002	0|0:0.098:0.905,0.093,0.002	0|0:0.098:0.905,0.093,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.098:0.905,0.093,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.098:0.905,0.093,0.002	0|0:0:1,0,0	0|0:0.098:0.905,0.093,0.002	0|0:0:1,0,0	0|0:0.098:0.905,0.093,0.002	0|0:0.098:0.905,0.093,0.002	0|0:0:1,0,0	0|0:0.202:0.805,0.189,0.007	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.554:0.024,0.397,0.578	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.478:0.058,0.406,0.536	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.648:0.028,0.296,0.676	1|1:1.599:0.042,0.316,0.642	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.259:0.138,0.465,0.397	1|1:1.527:0.054,0.364,0.582	1|1:2:0,0,1	0|1:1.405:0.091,0.413,0.496	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.659:0.022,0.297,0.681	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.098:0.905,0.093,0.002	0|1:1.188:0.194,0.423,0.382	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.741:0.026,0.206,0.768	0|0:0.098:0.905,0.093,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.968:0,0.031,0.969	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.963,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.742:0.02,0.219,0.761	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.558:0.004,0.434,0.562	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.098:0.905,0.093,0.002	0|0:0.098:0.905,0.093,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.098:0.905,0.093,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.823:0.01,0.156,0.834	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.491:0.063,0.382,0.555	0|0:0.098:0.905,0.093,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.098:0.905,0.093,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.079:0.921,0.079,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.507:0.071,0.352,0.578	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.845:0.01,0.136,0.855	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.098:0.905,0.093,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.098:0.905,0.093,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.793:0.008,0.192,0.8	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.098:0.905,0.093,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.098:0.905,0.093,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.948:0.002,0.048,0.95	0|0:0:1,0,0	0|0:0.098:0.905,0.093,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:1.82:0.014,0.152,0.834	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.944:0.001,0.055,0.945	1|1:1.972:0,0.028,0.972	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17294126	SNP-3.17292935.	A	G	.	PASS	AR2=0.992;DR2=0.992;AF=0.488	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.991:0.254,0.5,0.246	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1.088:0.206,0.501,0.293	1|1:0.991:0.254,0.5,0.246	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17295161	SNP-3.17293970.	A	G	.	PASS	AR2=0.973;DR2=0.979;AF=0.245	GT:DS:GP	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.895:0.004,0.097,0.899	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.865:0.005,0.125,0.87	0|0:0.13:0.875,0.119,0.006	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.822:0.009,0.161,0.831	0|0:0:1,0,0	1|1:1.895:0.004,0.097,0.899	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.826:0.008,0.158,0.834	0|0:0:1,0,0	1|1:1.849:0.008,0.136,0.857	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.865:0.005,0.125,0.87	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	1|1:1.872:0.004,0.121,0.876	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.315:0.702,0.282,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.195:0.815,0.174,0.011	0|0:0:1,0,0	0|0:0.099:0.904,0.092,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0.047:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.972:0.079,0.871,0.05	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:1.586:0.016,0.381,0.603	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.226:0.784,0.206,0.01	1|0:0.512:0.536,0.416,0.048	0|0:0:1,0,0	0|0:0.454:0.614,0.318,0.068	0|0:0.219:0.786,0.209,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.199:0.81,0.18,0.01	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.865:0.005,0.125,0.87	0|0:0:1,0,0	0|0:0.183:0.828,0.161,0.011	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.224:0.786,0.204,0.01	0|0:0:1,0,0
+3	17295666	SNP-3.17294475.	A	G	.	PASS	AR2=0.988;DR2=0.991;AF=0.242	GT:DS:GP	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.815:0.009,0.167,0.824	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.729:0.013,0.244,0.743	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.382:0.8,0.018,0.182	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.566:0.057,0.319,0.624	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.814:0.008,0.17,0.822	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.855:0.005,0.135,0.86	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17295669	SNP-3.17294478.	A	G	.	PASS	AR2=0.975;DR2=0.981;AF=0.244	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.636:0.015,0.333,0.652	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.535:0.04,0.385,0.575	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.839:0.008,0.145,0.847	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.558:0.035,0.372,0.593	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.072:0.929,0.069,0.002	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.045:0.956,0.044,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|1:0.891:0.11,0.889,0.001	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.108:0.895,0.102,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.836:0.008,0.148,0.844	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.68:0.008,0.305,0.688	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.81:0.01,0.171,0.82	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.964:0.001,0.034,0.965	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.627:0.023,0.326,0.65	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.882:0.003,0.113,0.884	1|1:1.513:0.046,0.394,0.559	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.639:0.032,0.296,0.672	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.866:0.006,0.121,0.872	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.963:0.001,0.035,0.964	1|1:1.76:0.016,0.207,0.776	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0
+3	17297158	SNP-3.17295967.	C	A	.	PASS	AR2=0.953;DR2=0.961;AF=0.252	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.282:0.737,0.245,0.018	0|0:0.025:0.975,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.938,0.06,0.003	0|0:0.162:0.845,0.147,0.007	0|0:0:1,0,0	0|0:0.209:0.802,0.187,0.011	0|0:0.065:0.935,0.065,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.259:0.757,0.226,0.017	0|0:0:1,0,0	0|0:0.276:0.743,0.239,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.035,0	0|0:0.029:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.959,0.041,0.001	0|0:0.084:0.919,0.078,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.965,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.951,0.048,0.001	1|1:2:0,0,1	0|0:0.042:0.958,0.041,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.92:0.002,0.077,0.921	1|1:2:0,0,1	0|0:0.165:0.85,0.135,0.015	1|1:1.661:0.021,0.298,0.681	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.124:0.179,0.517,0.304	0|0:0:1,0,0	0|0:0.058:0.944,0.053,0.003	1|1:1.798:0.009,0.185,0.806	0|0:0.05:0.952,0.046,0.002	1|0:1.268:0.088,0.555,0.357	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.949:0.001,0.049,0.95	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.556:0.049,0.347,0.604	0|0:0:1,0,0	1|1:1.76:0.011,0.219,0.77	0|0:0:1,0,0	0|1:1.034:0.04,0.886,0.074	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.15:0.86,0.13,0.01	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.088:0.921,0.071,0.008	0|1:0.925:0.262,0.55,0.187	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.284:0.722,0.271,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.844:0.006,0.145,0.849	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.839:0.005,0.151,0.844	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.718:0.01,0.262,0.728	1|1:2:0,0,1	1|1:1.913:0.002,0.082,0.915	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.944,0.054,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.827:0.01,0.154,0.837	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.037:0.963,0.036,0	0|0:0.255:0.758,0.228,0.013	0|0:0:1,0,0	0|0:0.21:0.801,0.188,0.011	0|0:0:1,0,0	0|0:0.224:0.788,0.199,0.013	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.27:0.748,0.235,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.761:0.006,0.227,0.767	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0.028:0.973,0.027,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.401:0.651,0.297,0.052	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.829:0.013,0.145,0.842	1|1:1.938:0.002,0.059,0.94	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.035,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17299097	SNP-3.17297906.	C	A	.	PASS	AR2=0.986;DR2=0.987;AF=0.362	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.961,0.039,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.077:0.925,0.074,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.922,0.076,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.937,0.062,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.079:0.922,0.076,0.002	0|0:0.079:0.923,0.075,0.002	0|0:0:1,0,0	0|0:0.065:0.936,0.063,0.001	0|0:0.036:0.964,0.036,0	0|0:0.088:0.915,0.083,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.861:0.012,0.115,0.873	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.954:0,0.046,0.954	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.861:0.332,0.474,0.194	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.871:0.007,0.115,0.878	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.946:0.001,0.052,0.947	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.923:0.001,0.075,0.924	0|0:0.336:0.676,0.312,0.012	1|1:1.935:0,0.065,0.935	1|1:2:0,0,1	1|1:1.922:0.001,0.075,0.924	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.895:0,0.105,0.895	1|1:1.935:0.001,0.062,0.937	1|1:1.897:0.001,0.101,0.898	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.081:0.921,0.077,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.941,0.058,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.944,0.056,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.072:0.929,0.069,0.002	0|0:0:1,0,0	0|0:0.041:0.959,0.04,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.928:0.002,0.069,0.929	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.867:0.003,0.127,0.87	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.865:0.001,0.133,0.866	1|1:1.97:0.001,0.029,0.971	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.937:0.001,0.06,0.938	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.05:0.95,0.049,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17299249	SNP-3.17298058.	C	A	.	PASS	AR2=0.987;DR2=0.989;AF=0.341	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.923:0.003,0.071,0.926	1|1:2:0,0,1	1|1:1.793:0.01,0.187,0.803	1|1:1.906:0.002,0.089,0.909	1|1:2:0,0,1	1|1:1.874:0.005,0.117,0.879	0|0:0:1,0,0	1|1:1.861:0.006,0.128,0.867	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.966:0.001,0.033,0.966	1|1:2:0,0,1	1|1:1.929:0.002,0.068,0.93	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.948:0.001,0.05,0.949	1|1:2:0,0,1	0|0:0.287:0.713,0.287,0	1|1:1.924:0.001,0.074,0.925	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.082:0.918,0.082,0	0|1:1:0,1,0	1|1:1.839:0.01,0.141,0.849	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.799:0.01,0.181,0.809	1|1:1.913:0.002,0.084,0.914	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.841:0.006,0.148,0.846	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.811:0.01,0.169,0.821	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.003:0.274,0.449,0.277	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.803:0.008,0.18,0.811	0|0:0:1,0,0
+3	17301282	SNP-3.17300091.	A	G	.	PASS	AR2=0.976;DR2=0.982;AF=0.311	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.945,0.054,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.621:0.036,0.306,0.658	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.64:0.033,0.295,0.673	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.6:0.041,0.318,0.641	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.619:0.037,0.307,0.656	1|1:1.651:0.019,0.311,0.67	1|1:1.709:0.02,0.251,0.729	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.662:0.029,0.281,0.691	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.636:0.034,0.297,0.669	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.604:0.041,0.314,0.645	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	0|0:0.038:0.963,0.037,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.853:0.007,0.133,0.86	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.643:0.032,0.292,0.675	0|0:0.029:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.963:0.001,0.036,0.964	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.642:0.032,0.294,0.674	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17301393	SNP-3.17300202.	C	A	.	PASS	AR2=0.993;DR2=0.994;AF=0.421	GT:DS:GP	0|0:0.02:0.98,0.02,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.186:0.822,0.169,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.187:0.822,0.169,0.009	0|0:0:1,0,0	1|0:0.242:0.774,0.21,0.016	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.016,0.984	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.941:0.001,0.057,0.942	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.169:0.839,0.154,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.104:0.899,0.098,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.238:0.772,0.218,0.01	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.935,0.064,0.001	1|1:1.953:0.001,0.045,0.954	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.104:0.9,0.097,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17302249	SNP-3.17301058.	C	A	.	PASS	AR2=0.998;DR2=0.999;AF=0.392	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.989,0.011,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.418:0.591,0.399,0.009	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.008:0.011,0.97,0.019	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	17302840	SNP-3.17301649.	A	G	.	PASS	AR2=1;DR2=1;AF=0.257	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.984:0,0.015,0.985	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17302866	SNP-3.17301675.	A	G	.	PASS	AR2=0.99;DR2=0.993;AF=0.213	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1.471:0.077,0.374,0.548	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.65:0.02,0.311,0.67	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.658:0.029,0.284,0.687	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.883:0.003,0.11,0.886	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17307301	SNP-3.17306110.	A	G	.	PASS	AR2=0.935;DR2=0.955;AF=0.223	GT:DS:GP	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.196:0.166,0.471,0.362	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.494:0.566,0.374,0.06	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.146:0.859,0.136,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.258:0.75,0.242,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.663:0.432,0.473,0.095	1|1:2:0,0,1	1|0:1:0,1,0	0|1:0.704:0.454,0.389,0.158	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.116:0.885,0.114,0.001	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.276:0.751,0.222,0.027	0|0:0.209:0.81,0.17,0.019	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.384:0.658,0.301,0.041	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.381:0.079,0.461,0.46	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.53:0.534,0.402,0.064	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.461:0.595,0.35,0.055	0|0:0.271:0.745,0.238,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1.175:0.176,0.473,0.351	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.942,0.057,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.394:0.645,0.315,0.04	0|0:0:1,0,0	1|0:0.778:0.322,0.579,0.1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.553:0.524,0.4,0.076	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.295:0.728,0.249,0.023	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.946,0.053,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.351:0.689,0.271,0.04	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.717:0.439,0.405,0.156	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17308836	SNP-3.17307645.	A	G	.	PASS	AR2=0.977;DR2=0.982;AF=0.38	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:0.722:0.348,0.581,0.071	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.342:0.68,0.297,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.315:0.715,0.255,0.03	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.545:0.531,0.392,0.077	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1.163:0.09,0.657,0.253	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:0.733:0.415,0.437,0.148	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.89:0.301,0.508,0.191	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.332:0.697,0.274,0.029	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.264:0.756,0.225,0.02	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.824:0.016,0.144,0.84	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.201:0.815,0.169,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.131:0.873,0.123,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.798:0.381,0.439,0.18	0|0:0:1,0,0
+3	17309669	SNP-3.17308478.	A	G	.	PASS	AR2=0.998;DR2=0.999;AF=0.26	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.705:0.014,0.267,0.719	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.03:0.97,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17309756	SNP-3.17308565.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.402	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.124:0.877,0.123,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.268:0.758,0.216,0.026	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.957,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.197:0.812,0.18,0.008	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.215:0.803,0.179,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17310245	SNP-3.17309054.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.379	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.085:0.917,0.082,0.002	0|0:0:1,0,0	0|0:0.071:0.931,0.068,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.97,0.029,0	0|0:0:1,0,0	0|0:0.018:0.983,0.017,0	0|0:0:1,0,0	0|0:0.088:0.914,0.084,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.091:0.911,0.087,0.002	0|0:0.17:0.836,0.158,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.077:0.924,0.074,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.943,0.056,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.081:0.92,0.078,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.09:0.912,0.086,0.002	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17310890	SNP-3.17309699.	C	A	.	PASS	AR2=0.971;DR2=0.978;AF=0.421	GT:DS:GP	0|0:0:1,0,0	1|1:1.593:0.042,0.323,0.635	1|1:1.593:0.042,0.323,0.635	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.225:0.785,0.205,0.01	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.979:0,0.021,0.979	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.254:0.76,0.225,0.015	0|0:0.237:0.777,0.208,0.015	0|0:0.266:0.752,0.231,0.018	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.065:0.935,0.064,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.062:0.939,0.06,0.001	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.225:0.787,0.201,0.012	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.065:0.936,0.063,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.936,0.063,0.001	0|0:0:1,0,0	0|0:0.192:0.819,0.17,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.518:0.533,0.417,0.05	0|0:0:1,0,0	0|0:0.269:0.742,0.247,0.011	0|0:0:1,0,0	0|0:0.078:0.923,0.077,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.889:0.003,0.105,0.892	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.894:0.179,0.748,0.073	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.504:0.544,0.408,0.048	1|1:2:0,0,1	1|1:1.914:0.001,0.084,0.915	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.156:0.848,0.148,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.884:0.006,0.104,0.89	0|0:0:1,0,0	0|1:0.29:0.731,0.249,0.02	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.206:0.802,0.191,0.008	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.238:0.776,0.209,0.015	0|0:0:1,0,0	0|0:0.267:0.751,0.23,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.238:0.776,0.209,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17311820	SNP-3.17310629.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.358	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:0.829:0.171,0.829,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.783:0.012,0.194,0.795	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.87:0.003,0.125,0.873	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.985:0,0.014,0.986	1|1:1.859:0.002,0.137,0.861	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.891:0.004,0.1,0.896	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.959:0.001,0.039,0.96	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.973:0,0.027,0.973	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.954:0.002,0.041,0.956	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.903:0.002,0.093,0.905	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.895:0.005,0.094,0.9	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.897:0.005,0.093,0.902	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17312803	SNP-3.17311612.	C	A	.	PASS	AR2=0.985;DR2=0.987;AF=0.333	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.926:0.002,0.07,0.928	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.907:0.003,0.087,0.91	0|0:0:1,0,0	1|1:1.795:0.011,0.184,0.805	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.822:0.005,0.169,0.827	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.827:0.009,0.155,0.836	1|1:1.786:0.011,0.193,0.796	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.803:0.01,0.177,0.813	1|1:2:0,0,1	1|1:1.835:0.006,0.153,0.841	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.928:0.002,0.068,0.93	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.86:0.005,0.13,0.865	1|1:1.938:0.001,0.06,0.939	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.815:0.01,0.165,0.825	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.838:0.007,0.148,0.845	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.787:0.014,0.184,0.801	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.838:0.008,0.146,0.846	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.712:0.017,0.254,0.729	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.814:0.01,0.165,0.824	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.853:0.006,0.135,0.859	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.907:0.003,0.087,0.91	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	17313282	SNP-3.17312091.	A	G	.	PASS	AR2=0.955;DR2=0.968;AF=0.562	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.932:0,0.067,0.933	0|1:1.073:0.002,0.923,0.075	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.772:0,0.227,0.773	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1.547:0.052,0.35,0.598	1|1:1.542:0.052,0.353,0.595	1|0:1.446:0.099,0.356,0.545	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.993:0,0.007,0.993	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.55:0.051,0.348,0.601	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.976:0,0.024,0.976	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.938:0,0.061,0.939	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.951:0.002,0.045,0.953	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.027,0.973	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:1.982:0,0.018,0.982	1|1:1.99:0,0.01,0.99	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:1.948:0.001,0.05,0.949	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.744:0.256,0.744,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.767:0.004,0.224,0.771	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	1|1:1.921:0.003,0.073,0.924	1|1:1.953:0,0.047,0.953	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.965:0,0.035,0.965	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.957:0.001,0.042,0.957	1|1:2:0,0,1	1|1:1.565:0.048,0.34,0.612	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.482:0.053,0.411,0.536	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.966:0,0.033,0.966	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.481:0.092,0.336,0.573	1|1:1.55:0.051,0.348,0.601	0|0:0:1,0,0	1|1:1.565:0.047,0.34,0.613	1|1:1.552:0.05,0.347,0.603	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.87:0.001,0.127,0.871	1|1:2:0,0,1	1|1:1.96:0,0.04,0.96	0|1:1:0,1,0	1|1:1.546:0.052,0.35,0.598	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	1|1:1.538:0.053,0.355,0.592	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.914:0,0.085,0.915	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.576:0.046,0.332,0.622	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.928:0.003,0.066,0.931	1|1:2:0,0,1	1|1:1.549:0.054,0.344,0.603	1|1:1.615:0.038,0.308,0.653	1|1:1.538:0.053,0.355,0.592	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17315125	SNP-3.17313934.	A	G	.	PASS	AR2=0.991;DR2=0.992;AF=0.239	GT:DS:GP	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.228:0.785,0.201,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.798:0.01,0.182,0.808	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.971,0.029,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.006:0.088,0.817,0.094	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.94:0.089,0.881,0.03	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.841:0.006,0.147,0.847	0|0:0.097:0.904,0.096,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.228:0.785,0.201,0.013	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.829:0.008,0.156,0.837	0|0:0.015:0.986,0.014,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17316053	SNP-3.17314862.	C	A	.	PASS	AR2=0.985;DR2=0.987;AF=0.423	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.063:0,0.937,0.063	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.012:0.988,0.012,0	0|0:0.096:0.907,0.091,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.928,0.072,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.144:0.86,0.135,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.215:0.798,0.188,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.96,0.04,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.085:0.917,0.081,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.135:0.869,0.127,0.004	0|0:0.125:0.878,0.118,0.003	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.129:0.875,0.12,0.004	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.21:0.795,0.201,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.142:0.861,0.136,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.109:0.894,0.104,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.143:0.864,0.129,0.007	0|0:0:1,0,0	0|0:0.102:0.9,0.097,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.127:0.877,0.119,0.004	0|0:0:1,0,0	0|0:0.124:0.878,0.121,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.101:0.901,0.096,0.002	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.134:0.869,0.128,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.101:0.902,0.095,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.119:0.886,0.11,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.114:0.89,0.106,0.004	1|1:2:0,0,1	0|0:0.381:0.661,0.297,0.042	0|0:0:1,0,0	0|0:0.1:0.903,0.094,0.003	0|0:0:1,0,0	0|0:0.11:0.893,0.103,0.003	1|1:2:0,0,1	0|0:0:1,0,0
+3	17316246	SNP-3.17315055.	C	A	.	PASS	AR2=1;DR2=1;AF=0.385	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17316358	SNP-3.17315167.	A	G	.	PASS	AR2=0.996;DR2=0.996;AF=0.269	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.304:0.701,0.294,0.005	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.982:0.024,0.969,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.965:0,0.034,0.966	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.87:0.007,0.116,0.877	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.961:0,0.038,0.961	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.969:0,0.03,0.969	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.16:0.846,0.148,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.971:0,0.029,0.971	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17316524	SNP-3.17315333.	A	G	.	PASS	AR2=1;DR2=1;AF=0.259	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.98:0.02,0.979,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	17316583	SNP-3.17315392.	A	G	.	PASS	AR2=0.993;DR2=0.994;AF=0.358	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.975:0,0.025,0.975	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.75:0.251,0.748,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.842:0.003,0.153,0.844	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.762:0.006,0.227,0.767	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.002:0.998,0.002,0	1|0:1:0,1,0	0|0:0.164:0.836,0.164,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.949:0.001,0.049,0.95	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.817:0.187,0.809,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.926:0.002,0.071,0.928	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.851:0.004,0.142,0.854	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.834:0.002,0.162,0.836	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.97:0,0.029,0.971	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1
+3	17316704	SNP-3.17315513.	C	A	.	PASS	AR2=0.996;DR2=0.996;AF=0.361	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.935:0.001,0.064,0.936	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.985:0,0.015,0.985	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.045:0.955,0.044,0	0|0:0.057:0.944,0.055,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.961:0.001,0.038,0.962	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.95:0,0.05,0.95	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.971:0,0.028,0.972	1|1:1.974:0,0.026,0.974	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:1.963:0,0.037,0.963	1|1:1.966:0,0.033,0.967	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.035:0.965,0.034,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.025:0.975,0.024,0	1|1:1.937:0.001,0.061,0.938	1|1:1.965:0,0.034,0.966	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:1.98:0,0.019,0.981	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.927:0,0.072,0.928	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.954:0.001,0.043,0.955	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.956,0.044,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.973:0,0.027,0.973	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.974:0,0.025,0.975	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.908:0.004,0.085,0.912	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17316770	SNP-3.17315579.	C	A	.	PASS	AR2=0.971;DR2=0.976;AF=0.436	GT:DS:GP	0|0:0.069:0.932,0.066,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.154:0.851,0.144,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.188:0.822,0.167,0.01	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.478:0.001,0.521,0.479	0|1:1.041:0.017,0.924,0.059	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.159:0.847,0.148,0.006	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.172:0.844,0.141,0.016	0|0:0.169:0.839,0.154,0.008	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.267:0.748,0.238,0.015	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.138:0.867,0.129,0.005	0|0:0.158:0.849,0.145,0.006	0|0:0.147:0.859,0.135,0.006	0|0:0.242:0.775,0.209,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.09:0.913,0.085,0.002	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.118:0.886,0.11,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.145:0.861,0.133,0.006	1|0:1:0,1,0	0|0:0.243:0.772,0.213,0.015	0|0:0:1,0,0	0|0:0.207:0.803,0.188,0.01	0|0:0.287:0.737,0.238,0.025	0|0:0.343:0.683,0.292,0.025	0|0:0:1,0,0	0|0:0.438:0.564,0.434,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.108:0.896,0.1,0.004	0|0:0.136:0.869,0.125,0.005	0|0:0.132:0.871,0.125,0.004	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.023:0.977,0.022,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.993:0.018,0.971,0.011	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.255:0.764,0.216,0.02	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.117:0.887,0.109,0.004	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.124:0.881,0.115,0.004	0|0:0.253:0.757,0.232,0.011	0|0:0.109:0.894,0.103,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.116:0.887,0.109,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.202:0.809,0.181,0.01	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.934,0.064,0.002	0|0:0.094:0.908,0.089,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.963,0.036,0.001	0|0:0.026:0.974,0.026,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.033:0.968,0.032,0	0|0:0.103:0.9,0.097,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17316808	SNP-3.17315617.	C	A	.	PASS	AR2=0.982;DR2=0.987;AF=0.43	GT:DS:GP	0|0:0.087:0.915,0.083,0.002	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.976,0.024,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.22:0.792,0.196,0.012	0|0:0:1,0,0	0|0:0.108:0.893,0.106,0.001	0|1:1:0,1,0	0|0:0.262:0.754,0.229,0.016	0|0:0.367:0.662,0.31,0.029	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.942,0.057,0.001	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.296:0.725,0.253,0.022	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.269:0.748,0.234,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.132:0.875,0.119,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.961,0.039,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:0.678:0.33,0.662,0.008	0|0:0.258:0.759,0.224,0.017	1|1:2:0,0,1	0|0:0.194:0.815,0.175,0.01	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.464:0.078,0.38,0.542	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.281:0.739,0.24,0.02	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.012:0.988,0.012,0
+3	17317090	SNP-3.17315899.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.353	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.98:0,0.02,0.98	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.976:0,0.023,0.977	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.97:0,0.029,0.97	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.941:0.001,0.057,0.942	1|1:2:0,0,1	1|1:1.951:0.001,0.048,0.952	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.94:0.001,0.058,0.941	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.947:0.001,0.052,0.947	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.944:0.001,0.054,0.945	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0,0.025,0.975	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.941:0.001,0.056,0.943	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17317120	SNP-3.17315929.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.345	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1.099:0.007,0.887,0.106	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.991:0,0.009,0.991	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17317156	SNP-3.17315965.	C	A	.	PASS	AR2=0.997;DR2=0.998;AF=0.414	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.202:0.809,0.181,0.011	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.349:0.652,0.347,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.956,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.098:0.905,0.093,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17317611	SNP-3.17316420.	A	G	.	PASS	AR2=0.878;DR2=0.902;AF=0.216	GT:DS:GP	0|0:0.652:0.473,0.403,0.124	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.896:0.315,0.475,0.211	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.945:0.055,0.945,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.094:0.908,0.09,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.082:0.003,0.911,0.085	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.442:0.582,0.393,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.005:0.247,0.501,0.252	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.784:0.372,0.471,0.156	1|1:2:0,0,1	1|0:0.742:0.404,0.45,0.146	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.789:0.356,0.5,0.145	0|0:0:1,0,0	1|0:1.053:0.204,0.539,0.257	0|0:0:1,0,0	0|1:0.696:0.389,0.526,0.085	0|1:0.799:0.37,0.462,0.168	1|0:0.672:0.346,0.635,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.028:0.23,0.512,0.258	0|0:0.632:0.478,0.412,0.11	0|0:0.306:0.698,0.298,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.026:0.242,0.49,0.268	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.608:0.484,0.424,0.092	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.194:0.815,0.177,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.619:0.413,0.555,0.032	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.177:0.829,0.164,0.006	0|0:0:1,0,0	0|1:0.625:0.442,0.49,0.067	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.657:0.418,0.507,0.075	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.948,0.048,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.784:0.373,0.471,0.156	0|0:0:1,0,0	0|1:0.936:0.27,0.524,0.206	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.045:0.956,0.044,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.343:0.676,0.305,0.019	0|0:0:1,0,0	0|0:0.126:0.876,0.123,0.002	0|0:0.084:0.917,0.082,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.422:0.639,0.3,0.061	1|0:0.485:0.546,0.424,0.031	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.514:0.565,0.357,0.078	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.127:0.879,0.115,0.006	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.264:0.743,0.25,0.007	0|0:0.349:0.672,0.307,0.021	0|0:0.183:0.825,0.167,0.008	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.905,0.093,0.002	0|0:0:1,0,0	1|0:0.802:0.338,0.521,0.141	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.49:0.555,0.401,0.044	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.666:0.432,0.471,0.097	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.138:0.869,0.125,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.749:0.374,0.503,0.123	1|1:2:0,0,1	0|0:0.038:0.962,0.037,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.028:0.24,0.492,0.268	1|1:2:0,0,1	0|0:0.89:0.311,0.487,0.201	1|0:0.993:0.258,0.492,0.251	0|0:0:1,0,0	0|0:0.024:0.976,0.023,0
+3	17323813	SNP-3.17322622.	A	G	.	PASS	AR2=0.949;DR2=0.963;AF=0.331	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.702:0.018,0.261,0.721	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.589:0.018,0.375,0.607	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.938:0.001,0.061,0.938	1|1:1.687:0.025,0.263,0.712	1|1:1.52:0.058,0.364,0.578	1|1:1.894:0.002,0.103,0.895	1|1:1.691:0.025,0.258,0.716	0|1:1.215:0.117,0.55,0.333	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.263:0.041,0.655,0.304	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.64:0.025,0.31,0.665	1|1:1.761:0.014,0.212,0.775	1|1:1.929:0.001,0.069,0.93	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.871:0.004,0.122,0.875	1|1:1.942:0.001,0.057,0.943	1|1:1.641:0.033,0.293,0.674	1|1:2:0,0,1	1|1:1.82:0.004,0.173,0.824	1|1:1.632:0.025,0.318,0.657	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.418:0.081,0.42,0.499	0|1:1.29:0.101,0.508,0.391	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.337:0.109,0.445,0.446	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.166:0.841,0.152,0.007	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.109:0.896,0.1,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.773:0.015,0.197,0.788	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.386:0.639,0.336,0.025	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.405:0.049,0.497,0.454	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.98:0,0.019,0.98	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.859:0.002,0.136,0.862	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.773:0.012,0.203,0.785	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.585:0.046,0.323,0.631	1|0:1.43:0.029,0.512,0.459	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.968:0,0.032,0.968	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.715:0.032,0.22,0.748	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.098:0.907,0.089,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.614:0.041,0.304,0.655	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.577:0.048,0.326,0.626	0|0:0:1,0,0	1|1:2:0,0,1
+3	17328763	SNP-3.17327572.	C	A	.	PASS	AR2=0.958;DR2=0.959;AF=0.497	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1.06:0.222,0.497,0.281	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1.008:0.245,0.502,0.253	0|0:0:1,0,0	0|1:1.017:0.242,0.5,0.259	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1.055:0.224,0.498,0.279	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1.031:0.234,0.5,0.265	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:1.06:0.222,0.497,0.281	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.154:0.175,0.496,0.329	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.845:0.326,0.503,0.171	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:0.973:0.264,0.498,0.238	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1.047:0.228,0.498,0.275	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1.036:0.232,0.499,0.269	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:0.95:0.271,0.508,0.221	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.059:0.222,0.497,0.281	1|1:2:0,0,1	1|1:0.944:0.275,0.506,0.219	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:1.047:0.228,0.498,0.275	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.956:0.273,0.497,0.23	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.01:0.244,0.502,0.254	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17329992	SNP-3.17328801.	C	A	.	PASS	AR2=0.999;DR2=1;AF=0.379	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.93:0,0.069,0.931	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17331753	SNP-3.17330562.	C	A	.	PASS	AR2=0.994;DR2=0.994;AF=0.369	GT:DS:GP	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.059:0.942,0.057,0.001	0|0:0:1,0,0	0|0:0.056:0.945,0.054,0.001	0|0:0.06:0.941,0.058,0.001	0|0:0:1,0,0	0|0:0.056:0.944,0.055,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.94,0.059,0.001	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.052:0.949,0.05,0.001	0|0:0.061:0.94,0.059,0.001	0|0:0:1,0,0	0|0:0.059:0.942,0.057,0.001	0|0:0.059:0.942,0.057,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.062:0.939,0.06,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.056:0.945,0.054,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.062:0.939,0.06,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.062:0.939,0.06,0.001	0|0:0.05:0.951,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.943,0.056,0.001	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.941,0.058,0.001	0|0:0:1,0,0	1|0:0.648:0.399,0.555,0.046	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.942,0.058,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17332696	SNP-3.17331505.	A	G	.	PASS	AR2=0.981;DR2=0.985;AF=0.373	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.168:0.174,0.483,0.342	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.69:0.499,0.312,0.189	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.946:0.001,0.053,0.946	1|1:2:0,0,1	1|1:1.939:0.001,0.059,0.94	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.737:0.033,0.198,0.77	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.934:0.001,0.065,0.934	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.755:0.009,0.227,0.764	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.471:0.675,0.18,0.146	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.951:0.001,0.048,0.951	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.075:0.926,0.073,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.075:0.927,0.072,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.156:0.18,0.485,0.336	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.093:0.91,0.088,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.955:0.001,0.044,0.955	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.848:0.006,0.141,0.854	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17334445	SNP-3.17333254.	C	A	.	PASS	AR2=0.997;DR2=0.997;AF=0.401	GT:DS:GP	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.759:0.001,0.239,0.76	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.955,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.065:0.936,0.063,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.117:0.889,0.105,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.051:0.95,0.05,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.218:0.786,0.211,0.004	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.018:0.982,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17337378	SNP-3.17336187.	C	A	.	PASS	AR2=1;DR2=1;AF=0.379	GT:DS:GP	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17340602	SNP-3.17339411.	A	G	.	PASS	AR2=0.969;DR2=0.975;AF=0.333	GT:DS:GP	1|1:1.864:0.005,0.127,0.868	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	1|1:1.793:0.01,0.187,0.803	0|0:0:1,0,0	0|0:0.047:0.954,0.046,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.765:0.014,0.207,0.779	1|1:2:0,0,1	1|1:1.757:0.015,0.213,0.772	1|1:2:0,0,1	1|1:1.826:0.005,0.163,0.831	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.709:0.021,0.25,0.73	1|1:1.721:0.02,0.24,0.741	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.608:0.036,0.32,0.644	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.748:0.016,0.22,0.764	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.785:0.011,0.192,0.797	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.957,0.043,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.96,0.039,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.151:0.851,0.148,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.751:0.016,0.217,0.767	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.781:0.011,0.197,0.792	1|0:1:0,1,0	1|0:1.716:0.019,0.246,0.735	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.36:0.659,0.323,0.019	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.789:0.012,0.188,0.801	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.768:0.012,0.208,0.78	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.024:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.884:0.01,0.097,0.893	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.413:0.605,0.378,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.798:0.011,0.179,0.81	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.832:0.009,0.149,0.841	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.932:0.001,0.066,0.933	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.935:0.002,0.06,0.937	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.758:0.015,0.212,0.773	1|1:1.765:0.013,0.209,0.778	1|1:1.756:0.015,0.214,0.771	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17342404	SNP-3.17341213.	C	A	.	PASS	AR2=0.966;DR2=0.975;AF=0.26	GT:DS:GP	0|0:0:1,0,0	0|0:0.046:0.954,0.046,0	0|0:0.052:0.949,0.051,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.956,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.258:0.088,0.567,0.345	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.785:0.33,0.554,0.116	1|1:1.772:0.004,0.221,0.775	1|0:0.987:0.202,0.608,0.189	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.841:0.003,0.153,0.844	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.482:0.014,0.489,0.497	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.03:0.97,0.03,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.085:0.915,0.084,0.001	1|0:0.585:0.521,0.374,0.106	1|1:2:0,0,1	0|0:0.293:0.716,0.276,0.009	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.047:0.954,0.046,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.482:0.067,0.384,0.549	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.927:0.001,0.071,0.928	1|1:1.947:0.002,0.05,0.949	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.958,0.041,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.051,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:1.478:0.078,0.365,0.557	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.426:0.014,0.545,0.44	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.933:0.003,0.061,0.936	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.052:0.949,0.05,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.859:0.001,0.138,0.86	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.111:0.139,0.612,0.249	0|0:0:1,0,0
+3	17343763	SNP-3.17342572.	A	G	.	PASS	AR2=0.994;DR2=0.996;AF=0.275	GT:DS:GP	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.199:0.086,0.63,0.285	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.887:0.003,0.107,0.89	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.425:0.628,0.319,0.053	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17344512	SNP-3.17343321.	C	A	.	PASS	AR2=0.981;DR2=0.985;AF=0.317	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.745:0.018,0.219,0.763	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.839:0.007,0.148,0.846	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.058:0.942,0.058,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.819:0.014,0.153,0.833	1|1:1.722:0.02,0.237,0.743	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.822:0.015,0.148,0.837	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.771:0.014,0.2,0.786	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.892:0.001,0.106,0.893	0|0:0:1,0,0	1|1:1.674:0.024,0.279,0.698	1|1:1.816:0.008,0.169,0.823	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.926:0,0.073,0.927	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.842:0.005,0.147,0.847	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.825:0.017,0.141,0.842	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.489:0.065,0.38,0.555	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.749:0.016,0.219,0.765	0|0:0:1,0,0	0|0:0.109:0.906,0.079,0.015	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.95:0.003,0.043,0.953	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.901:0.004,0.091,0.905	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.978:0,0.022,0.978	1|1:1.998:0,0.002,0.998	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.027,0.973	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.925:0.002,0.071,0.927	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17349057	SNP-3.17347866.	C	A	.	PASS	AR2=0.998;DR2=0.999;AF=0.351	GT:DS:GP	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.423:0.59,0.397,0.013	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17349725	SNP-3.17348534.	C	A	.	PASS	AR2=0.986;DR2=0.989;AF=0.368	GT:DS:GP	0|0:0.016:0.984,0.015,0	0|0:0.185:0.834,0.148,0.019	0|0:0.341:0.677,0.305,0.018	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.232:0.772,0.224,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.475:0.531,0.464,0.006	0|0:0.09:0.912,0.086,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.075:0.929,0.067,0.004	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.255:0.749,0.248,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.159:0.847,0.147,0.006	0|0:0.052:0.948,0.051,0.001	0|0:0:1,0,0	0|0:0.101:0.901,0.097,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.948,0.052,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0.053:0.948,0.051,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.956,0.043,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.111:0.893,0.104,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.198:0.821,0.16,0.019	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.959,0.04,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.94,0.059,0.001	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.96,0.039,0.001	0|0:0.06:0.941,0.058,0.001	0|0:0.043:0.958,0.042,0.001	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.968,0.032,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.201:0.818,0.163,0.019	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.024:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17350375	SNP-3.17349184.	C	A	.	PASS	AR2=0.984;DR2=0.987;AF=0.351	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.123:0.04,0.796,0.163	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.897:0.005,0.092,0.903	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.883:0,0.116,0.883	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.706:0.02,0.254,0.726	1|1:1.849:0.003,0.145,0.852	1|1:1.575:0.025,0.375,0.6	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.725:0.007,0.26,0.732	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.923:0.001,0.075,0.924	1|1:1.948:0,0.051,0.948	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	0|0:0:1,0,0	1|1:1.714:0.027,0.232,0.741	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.154:0.846,0.154,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.949:0.001,0.049,0.95	1|1:1.849:0.008,0.136,0.856	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.939:0.002,0.058,0.941	1|1:1.972:0,0.027,0.973	1|1:1.87:0.005,0.12,0.875	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.951:0.001,0.048,0.952	1|1:1.959:0,0.04,0.96	1|0:1:0,1,0	1|1:1.98:0,0.019,0.981	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.988,0.012,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.71:0.026,0.238,0.736	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.016,0.984	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.946:0.001,0.052,0.947	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.828:0.006,0.16,0.834	0|0:0:1,0,0
+3	17351193	SNP-3.17350002.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.378	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.18:0.826,0.168,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.083:0.919,0.079,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17354614	SNP-3.17353423.	A	G	.	PASS	AR2=0.971;DR2=0.977;AF=0.307	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.237:0.764,0.236,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.191:0.817,0.174,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.132:0.873,0.123,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.161:0.847,0.145,0.008	0|1:1:0,1,0	0|0:0.095:0.908,0.09,0.003	0|0:0.139:0.866,0.129,0.005	0|0:0.086:0.916,0.082,0.002	0|1:0.532:0.5,0.468,0.032	0|0:0:1,0,0	0|0:0.13:0.872,0.125,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.049:0.952,0.048,0	0|0:0:1,0,0	0|0:0.199:0.81,0.18,0.009	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.019:0.982,0.018,0	0|0:0.387:0.639,0.336,0.025	0|0:0.296:0.722,0.259,0.019	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.962,0.038,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.251:0.76,0.228,0.012	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.163:0.844,0.149,0.007	0|0:0.151:0.854,0.141,0.005	0|0:0.143:0.862,0.132,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.457:0.572,0.399,0.029	0|0:0:1,0,0	0|0:0.08:0.922,0.076,0.002	0|0:0.155:0.848,0.15,0.003	0|0:0.165:0.841,0.152,0.006	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.954,0.045,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.202:0.809,0.181,0.011	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.067:0.936,0.061,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.053:0.95,0.048,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.958,0.041,0.001	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.313:0.706,0.275,0.019	0|0:0.288:0.739,0.234,0.027	0|0:0.225:0.788,0.198,0.013	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0
+3	17356355	SNP-3.17355164.	A	G	.	PASS	AR2=0.982;DR2=0.984;AF=0.283	GT:DS:GP	0|0:0.043:0.957,0.042,0	0|0:0:1,0,0	0|0:0.181:0.819,0.181,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.131:0.871,0.126,0.003	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.944:0.001,0.053,0.946	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.016,0.983	1|1:2:0,0,1	1|1:1.694:0.021,0.264,0.715	1|1:1.966:0,0.033,0.966	1|1:1.98:0,0.019,0.98	1|1:1.91:0.002,0.087,0.911	1|1:2:0,0,1	0|0:0.139:0.866,0.129,0.005	0|0:0.121:0.883,0.114,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.12:0.884,0.113,0.004	0|0:0.149:0.856,0.139,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.13:0.875,0.12,0.005	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.931,0.068,0.001	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.968,0.032,0	0|0:0:1,0,0	0|0:0.149:0.857,0.138,0.005	0|0:0.111:0.893,0.104,0.003	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.061:0.942,0.055,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.13:0.873,0.123,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.147:0.859,0.135,0.006	0|0:0.162:0.845,0.149,0.007	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.156:0.844,0.156,0	0|0:0.154:0.852,0.142,0.006	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.15:0.855,0.14,0.005	0|0:0.163:0.842,0.153,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.142:0.863,0.132,0.005	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.133:0.871,0.125,0.004	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.044:0.956,0.043,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17357038	SNP-3.17355847.	A	G	.	PASS	AR2=0.874;DR2=0.897;AF=0.374	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.622:0.442,0.494,0.064	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.258:0.135,0.471,0.394	1|1:2:0,0,1	0|1:1.03:0.23,0.509,0.261	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.256:0.129,0.487,0.384	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.878:0.221,0.68,0.099	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.064:0.219,0.499,0.282	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.123:0.178,0.521,0.301	1|1:1.734:0.02,0.226,0.754	1|1:1.228:0.139,0.493,0.368	0|0:1.1:0.204,0.492,0.304	0|0:0:1,0,0	1|1:1.825:0.004,0.167,0.829	0|1:0.931:0.293,0.482,0.225	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.045:0.234,0.487,0.279	1|0:0.87:0.309,0.512,0.179	1|1:1.684:0.025,0.266,0.709	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.519:0.543,0.396,0.062	1|1:2:0,0,1	1|0:0.91:0.203,0.685,0.113	1|0:1.214:0.143,0.5,0.357	1|1:2:0,0,1	0|0:0.886:0.315,0.484,0.201	1|1:2:0,0,1	1|1:1.41:0.087,0.416,0.497	1|1:1.821:0.006,0.166,0.828	0|1:1.182:0.144,0.531,0.326	1|1:1.572:0.029,0.37,0.601	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.795:0.39,0.425,0.185	1|1:2:0,0,1	1|1:1.892:0.002,0.104,0.894	0|0:0:1,0,0	1|1:1.803:0.019,0.159,0.822	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.538:0.05,0.362,0.588	0|0:0.55:0.526,0.399,0.075	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.3:0.125,0.45,0.425	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.484:0.065,0.385,0.55	1|1:1.486:0.068,0.379,0.554	0|0:1.226:0.146,0.481,0.373	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.983:0,0.016,0.984	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.238:0.157,0.448,0.395	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.463:0.078,0.381,0.541	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.196:0.094,0.616,0.29	1|1:1.479:0.069,0.383,0.548	1|0:1.272:0.126,0.477,0.397	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.126:0.881,0.112,0.007	1|1:2:0,0,1	0|1:1.316:0.088,0.508,0.404	0|1:1.027:0.228,0.518,0.254	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.308:0.12,0.452,0.428	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.895:0.293,0.52,0.188	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.656:0.03,0.284,0.686	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.779:0.38,0.461,0.159	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.793:0.373,0.461,0.166	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.892:0.318,0.473,0.21	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.475:0.583,0.359,0.058	1|0:0.639:0.459,0.444,0.098	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.487:0.046,0.42,0.534	0|0:0:1,0,0	0|0:0.374:0.657,0.312,0.031	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.305:0.109,0.477,0.414	1|0:0.828:0.334,0.503,0.163	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.885:0.004,0.107,0.889	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.939:0.001,0.059,0.94	1|1:1.258:0.139,0.463,0.397	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.08:0.227,0.467,0.306	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.696:0.025,0.255,0.721	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.076:0.927,0.07,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.463:0.565,0.407,0.028	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17357239	SNP-3.17356048.	A	G	.	PASS	AR2=0.99;DR2=0.993;AF=0.279	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.49:0.043,0.424,0.533	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.949:0.001,0.049,0.95	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.118:0.883,0.115,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.042:0.959,0.041,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.298:0.731,0.24,0.029	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.14:0.865,0.131,0.005	0|0:0.049:0.952,0.047,0.001	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.153:0.851,0.145,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.019:0.982,0.018,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0.03:0.97,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.954,0.046,0.001	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0.193:0.814,0.178,0.008	0|0:0:1,0,0
+3	17360156	SNP-3.17358965.	A	G	.	PASS	AR2=0.987;DR2=0.989;AF=0.343	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.416:0.592,0.4,0.008	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.087:0.916,0.081,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.976:0,0.024,0.976	1|1:1.892:0.001,0.105,0.893	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.85:0.001,0.149,0.851	1|1:1.968:0,0.032,0.968	1|1:1.955:0,0.044,0.956	1|1:2:0,0,1	1|1:1.977:0,0.023,0.977	1|1:1.994:0,0.006,0.994	1|1:1.837:0.009,0.144,0.846	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.928:0.001,0.071,0.928	1|1:1.861:0.002,0.135,0.863	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:1.832:0.004,0.16,0.836	1|1:1.954:0,0.045,0.955	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.773:0.013,0.201,0.786	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.965:0,0.034,0.966	1|1:2:0,0,1	1|1:1.955:0.001,0.044,0.955	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.813:0.009,0.169,0.822	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.938:0.001,0.06,0.939	1|1:1.909:0.002,0.087,0.911	1|1:1.878:0.004,0.114,0.882	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.075:0.927,0.07,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.912:0.001,0.086,0.913	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.887:0.002,0.109,0.889	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.784:0.012,0.193,0.795	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.839:0.007,0.146,0.847	1|1:1.983:0,0.017,0.983	0|0:0:1,0,0	1|1:2:0,0,1
+3	17360361	SNP-3.17359170.	C	A	.	PASS	AR2=1;DR2=1;AF=0.348	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.961:0,0.039,0.961	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.022,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17361360	SNP-3.17360169.	A	G	.	PASS	AR2=0.985;DR2=0.987;AF=0.347	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.852:0.005,0.138,0.857	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.946:0.001,0.052,0.947	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.935:0.002,0.061,0.937	1|1:1.908:0.002,0.087,0.91	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.948:0.001,0.05,0.949	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.819:0.009,0.164,0.828	1|1:1.902:0.003,0.092,0.905	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.072:0.929,0.071,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.081:0.921,0.077,0.002	0|0:0.011:0.989,0.011,0	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.099:0.903,0.096,0.002	0|0:0.015:0.985,0.014,0	0|0:0:1,0,0	0|0:0.168:0.839,0.154,0.007	0|0:0.013:0.988,0.012,0	0|0:0:1,0,0	0|0:0.053:0.948,0.051,0.001	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0.031:0.969,0.031,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0.044:0.957,0.043,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.187:0.818,0.176,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.12:0.886,0.109,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.019,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.296:0.734,0.237,0.029	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.934:0.001,0.064,0.935	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.035:0.965,0.035,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.94:0.001,0.058,0.941	1|1:2:0,0,1	1|1:1.842:0.004,0.149,0.846	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.907:0.003,0.087,0.91	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.209:0.809,0.174,0.017	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.237:0.788,0.186,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.82:0.004,0.172,0.824	1|1:2:0,0,1	1|1:1.878:0.005,0.113,0.882	0|0:0:1,0,0	1|1:2:0,0,1
+3	17363340	SNP-3.17362149.	A	G	.	PASS	AR2=0.928;DR2=0.947;AF=0.568	GT:DS:GP	1|1:2:0,0,1	0|0:0.534:0.546,0.375,0.08	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.309:0.029,0.633,0.338	1|1:1.757:0.017,0.209,0.774	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.363:0.099,0.44,0.461	1|1:2:0,0,1	1|1:1.413:0.082,0.422,0.496	1|1:2:0,0,1	1|1:1.881:0.004,0.112,0.884	1|1:1.803:0.008,0.182,0.81	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.323:0.019,0.64,0.341	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.651:0.025,0.299,0.676	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.963:0,0.036,0.963	1|1:2:0,0,1	1|0:1.509:0.051,0.39,0.56	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.746:0.025,0.204,0.771	0|1:1:0,1,0	1|1:1.687:0.024,0.265,0.711	1|1:1.66:0.019,0.302,0.679	1|1:2:0,0,1	0|1:1.278:0.043,0.637,0.32	1|1:1.913:0.002,0.083,0.915	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.947:0.001,0.052,0.947	1|0:1.286:0.057,0.601,0.342	1|1:2:0,0,1	1|1:1.859:0.004,0.132,0.864	1|1:1.902:0.003,0.093,0.905	1|1:2:0,0,1	1|1:1.953:0,0.046,0.954	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1.305:0.04,0.615,0.345	1|0:1:0,1,0	1|1:1.711:0.017,0.255,0.728	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.907:0.002,0.088,0.909	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.958:0,0.041,0.959	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.828:0.004,0.165,0.832	1|1:1.957:0,0.042,0.958	1|0:1.133:0.142,0.582,0.276	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.947:0.001,0.052,0.947	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.853:0.004,0.14,0.856	1|1:2:0,0,1	0|1:1.332:0.034,0.601,0.365	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.932,0.066,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.509:0.491,0.509,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.668:0.029,0.275,0.696	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:1.865:0,0.135,0.865	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.867:0.004,0.124,0.872	1|1:1.721:0.018,0.243,0.739	0|1:1.284:0.064,0.587,0.349	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.627:0.027,0.319,0.654	1|1:2:0,0,1	1|1:1.776:0.016,0.192,0.792	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.717:0.014,0.256,0.73	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.368:0.106,0.42,0.474	1|1:1.779:0.002,0.218,0.78	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.698:0.024,0.254,0.722	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.133:0.143,0.582,0.276	1|1:1.707:0.023,0.248,0.73	1|1:1.842:0.006,0.146,0.848	1|1:2:0,0,1	1|1:1.531:0.027,0.414,0.558	1|1:1.533:0.057,0.353,0.59	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.953:0.001,0.046,0.953	1|1:1.62:0.032,0.316,0.652	1|1:1.905:0.003,0.089,0.908	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.889:0.002,0.106,0.892	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.94:0.001,0.058,0.941	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.959:0.001,0.039,0.96	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:1.944:0.001,0.054,0.945	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.593:0.042,0.323,0.635	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17363396	SNP-3.17362205.	C	A	.	PASS	AR2=0.98;DR2=0.984;AF=0.432	GT:DS:GP	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.26:0.754,0.232,0.014	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.442:0.602,0.355,0.044	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.933,0.066,0.001	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.206:0.801,0.191,0.007	0|0:0.063:0.938,0.061,0.001	0|0:0:1,0,0	0|0:0.047:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.256:0.761,0.223,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.931,0.068,0.001	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.283:0.739,0.238,0.023	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.212:0.798,0.192,0.01	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.169:0.838,0.155,0.007	0|1:1:0,1,0	1|0:1.223:0.142,0.493,0.365	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.017,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.425:0.623,0.328,0.049	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.432:0.617,0.333,0.05	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.722:0.397,0.484,0.119	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.126:0.875,0.123,0.002	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17363628	SNP-3.17362437.	A	G	.	PASS	AR2=0.881;DR2=0.893;AF=0.424	GT:DS:GP	1|1:2:0,0,1	1|0:1.196:0.168,0.467,0.364	1|1:2:0,0,1	0|0:0.042:0.959,0.041,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.246:0.756,0.243,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.672:0.022,0.283,0.694	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.033:0.226,0.515,0.259	1|1:1.929:0.002,0.067,0.931	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.029:0.972,0.027,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.829:0.008,0.156,0.837	1|1:2:0,0,1	1|1:1.816:0.008,0.168,0.824	1|1:2:0,0,1	1|1:1.865:0.005,0.126,0.87	1|0:0.743:0.346,0.565,0.089	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.796:0.365,0.475,0.161	1|0:0.773:0.371,0.486,0.144	1|1:2:0,0,1	0|0:0.2:0.811,0.179,0.011	0|1:1.085:0.212,0.491,0.297	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.814:0.338,0.51,0.152	1|0:0.887:0.29,0.534,0.177	1|1:2:0,0,1	1|0:0.867:0.321,0.491,0.188	1|1:1.2:0.16,0.481,0.36	1|0:0.732:0.405,0.458,0.137	0|1:1.131:0.189,0.49,0.321	0|1:0.837:0.342,0.479,0.179	1|1:1.08:0.193,0.534,0.273	0|1:0.738:0.39,0.483,0.128	0|0:0:1,0,0	1|0:0.834:0.305,0.557,0.138	0|0:0.427:0.616,0.341,0.043	1|1:1.331:0.119,0.431,0.45	1|1:2:0,0,1	1|1:1.901:0.003,0.094,0.904	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.422:0.623,0.333,0.045	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.17:0.174,0.482,0.344	0|0:0.345:0.684,0.286,0.03	0|0:0:1,0,0	1|0:0.985:0.261,0.493,0.246	1|1:1.758:0.008,0.226,0.766	0|0:0:1,0,0	0|0:0.061:0.94,0.059,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0	0|0:1.015:0.249,0.488,0.264	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.595:0.021,0.363,0.616	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.247:0.141,0.471,0.388	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.941,0.059,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.733:0.391,0.485,0.124	0|0:0:1,0,0	0|0:0.864:0.328,0.48,0.192	0|0:0:1,0,0	0|1:0.979:0.258,0.504,0.238	0|0:0:1,0,0	1|1:0.783:0.374,0.47,0.156	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.872:0.003,0.121,0.876	0|1:0.883:0.314,0.489,0.197	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.897:0.003,0.098,0.899	1|1:1.803:0.009,0.179,0.812	1|1:1.654:0.028,0.289,0.682	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.12:0.197,0.486,0.317	0|1:0.792:0.356,0.497,0.148	0|0:0.994:0.247,0.513,0.24	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.842:0.005,0.148,0.847	1|1:2:0,0,1	1|1:1.893:0.003,0.101,0.896	1|1:1.839:0.006,0.148,0.845	1|1:2:0,0,1	0|1:1.146:0.184,0.486,0.33	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.7:0.425,0.449,0.126	0|1:1.106:0.2,0.495,0.305	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.11:0.198,0.495,0.308	1|1:1.265:0.124,0.487,0.389	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.827:0.343,0.486,0.171	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.763:0.006,0.224,0.77	0|0:0:1,0,0	1|1:1.885:0.003,0.108,0.889	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.869:0.325,0.481,0.194	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.866:0.327,0.48,0.193	0|1:0.808:0.345,0.501,0.153	1|0:0.864:0.329,0.479,0.192	1|0:0.927:0.288,0.497,0.215	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.018:0.243,0.495,0.262	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.966,0.034,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.014:0.986,0.014,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.21:0.801,0.187,0.011	0|0:0:1,0,0	1|1:2:0,0,1
+3	17368872	SNP-3.17367681.	A	G	.	PASS	AR2=0.989;DR2=0.992;AF=0.385	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.172:0.835,0.157,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.158:0.846,0.15,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.387:0.645,0.323,0.032	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.972,0.028,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.1:0.902,0.095,0.003	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.117:0.887,0.109,0.004	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.882:0.003,0.112,0.885	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.968:0,0.031,0.969	0|0:0.2:0.804,0.192,0.004	1|1:2:0,0,1	0|0:0.391:0.647,0.315,0.038	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.04:0.96,0.039,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.337:0.704,0.255,0.041	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17370258	SNP-3.17369067.	C	A	.	PASS	AR2=0.975;DR2=0.982;AF=0.355	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.128:0.881,0.111,0.009	0|0:0:1,0,0	0|0:0.23:0.779,0.212,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.937,0.062,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.035:0.235,0.496,0.27	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.613:0.032,0.323,0.645	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.696:0.028,0.247,0.724	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|0:1:0,1,0	1|1:1.95:0.001,0.049,0.95	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.623:0.535,0.306,0.159	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.817:0.01,0.163,0.827	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.157:0.847,0.149,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.219:0.796,0.19,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.937:0.001,0.06,0.939	1|1:2:0,0,1	1|0:0.62:0.539,0.302,0.159	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.184:0.822,0.173,0.006	0|0:0.081:0.923,0.074,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.979:0,0.02,0.98	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.425:0.053,0.469,0.478	0|0:0:1,0,0
+3	17371659	SNP-3.17370468.	C	A	.	PASS	AR2=0.984;DR2=0.988;AF=0.323	GT:DS:GP	0|0:0:1,0,0	0|0:0.029:0.972,0.028,0	0|0:0.016:0.984,0.016,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.808:0.006,0.18,0.814	1|1:1.734:0.011,0.244,0.745	1|1:1.392:0.07,0.468,0.462	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.726:0.014,0.245,0.741	1|1:1.967:0,0.032,0.968	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.906:0.002,0.091,0.908	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.485:0.516,0.484,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.794:0.009,0.187,0.803	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.831:0.006,0.156,0.838	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.866:0.004,0.125,0.87	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.852:0.005,0.138,0.857	1|1:2:0,0,1	1|1:1.802:0.01,0.179,0.811	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.862:0.005,0.128,0.867	1|1:2:0,0,1	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.965:0.001,0.034,0.965	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.73:0.016,0.238,0.746	0|0:0:1,0,0
+3	17371724	SNP-3.17370533.	A	G	.	PASS	AR2=0.993;DR2=0.994;AF=0.243	GT:DS:GP	0|0:0.008:0.992,0.008,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.6:0.461,0.477,0.061	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.952:0.001,0.047,0.952	1|1:1.939:0.002,0.058,0.94	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.017:0.983,0.017,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.91:0.001,0.087,0.911	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.219:0.798,0.184,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.217:0.801,0.182,0.017	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17371751	SNP-3.17370560.	A	G	.	PASS	AR2=0.994;DR2=0.995;AF=0.338	GT:DS:GP	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.931:0.001,0.067,0.932	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.744:0.018,0.22,0.762	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.94:0.001,0.058,0.941	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.926:0.002,0.07,0.928	1|1:1.966:0,0.033,0.966	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.919:0.002,0.078,0.92	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0,0.024,0.976	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.823:0.002,0.172,0.825	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.931:0.001,0.066,0.932	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.966:0,0.034,0.966	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.937:0.001,0.061,0.938	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.004,0.995	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.788:0.009,0.193,0.797	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17373470	SNP-3.17372279.	A	G	.	PASS	AR2=0.927;DR2=0.943;AF=0.557	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.802:0.008,0.182,0.81	1|1:1.856:0.005,0.134,0.861	0|0:0.449:0.585,0.381,0.034	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.835:0.007,0.15,0.843	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.864:0.005,0.127,0.868	1|1:1.906:0.002,0.09,0.908	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.742:0.006,0.246,0.748	1|1:1.571:0.023,0.382,0.595	1|1:1.855:0.006,0.133,0.861	1|1:2:0,0,1	1|1:1.854:0.006,0.134,0.86	1|1:1.905:0.002,0.091,0.907	1|1:1.672:0.018,0.292,0.69	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.851:0.002,0.146,0.852	0|1:1.597:0.03,0.343,0.627	0|0:0.854:0.329,0.488,0.183	1|1:2:0,0,1	1|1:1.65:0.031,0.287,0.682	1|1:1.756:0.015,0.213,0.772	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.567:0.029,0.375,0.596	1|1:2:0,0,1	1|1:1.582:0.028,0.363,0.61	1|1:1.593:0.022,0.362,0.616	1|1:1.677:0.029,0.266,0.706	1|1:1.723:0.019,0.239,0.742	1|1:2:0,0,1	1|1:1.93:0.002,0.066,0.932	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.974:0,0.026,0.974	1|1:1.624:0.026,0.323,0.651	1|1:1.709:0.011,0.268,0.721	0|0:0:1,0,0	1|1:1.846:0.007,0.141,0.853	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.579:0.047,0.328,0.625	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.678:0.023,0.276,0.701	1|1:1.836:0.006,0.152,0.842	1|1:2:0,0,1	1|1:1.738:0.015,0.233,0.753	0|1:1.395:0.055,0.496,0.449	1|1:2:0,0,1	1|1:1.73:0.029,0.213,0.758	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.2:0.158,0.483,0.358	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.743:0.015,0.228,0.757	1|1:1.569:0.056,0.318,0.625	0|1:1.397:0.089,0.424,0.486	0|1:1.165:0.144,0.546,0.309	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:1.98:0,0.02,0.98	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.859:0.005,0.131,0.864	1|1:2:0,0,1	1|1:1.846:0.006,0.143,0.852	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.883:0.003,0.11,0.886	1|1:1.895:0.003,0.098,0.898	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.427:0.034,0.504,0.462	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.918:0.002,0.078,0.92	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.748:0.005,0.242,0.753	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.491:0.032,0.445,0.523	0|0:0:1,0,0	1|1:1.954:0.001,0.045,0.955	0|0:0:1,0,0	1|0:1.201:0.095,0.608,0.296	0|0:0:1,0,0	1|0:1.712:0.018,0.251,0.73	1|1:1.967:0,0.033,0.967	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.867:0.005,0.122,0.873	1|1:1.848:0.006,0.14,0.854	1|1:1.938:0.001,0.06,0.939	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.955:0,0.044,0.956	1|1:1.956:0.001,0.042,0.957	1|1:1.417:0.055,0.474,0.471	1|1:1.68:0.017,0.286,0.697	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.867:0.005,0.123,0.872	1|1:2:0,0,1	1|1:1.916:0.002,0.08,0.918	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.953:0.001,0.046,0.953	1|1:1.954:0.001,0.045,0.954	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.875:0.009,0.107,0.884	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:1.933:0.001,0.065,0.934	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.483:0.575,0.368,0.058	0|1:0.766:0.356,0.522,0.122	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995
+3	17376074	SNP-3.17374883.	A	G	.	PASS	AR2=0.995;DR2=0.996;AF=0.325	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.855:0.006,0.134,0.86	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.897:0.002,0.099,0.899	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.587:0.011,0.392,0.598	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.908:0.002,0.089,0.91	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.845:0.007,0.14,0.852	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.9:0.004,0.093,0.904	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.937:0.001,0.061,0.938	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17376185	SNP-3.17374994.	A	G	.	PASS	AR2=0.96;DR2=0.969;AF=0.276	GT:DS:GP	0|0:0:1,0,0	0|0:0.157:0.846,0.151,0.003	0|0:0.069:0.933,0.065,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.736:0.018,0.229,0.754	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1.266:0.101,0.533,0.366	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.39:0.653,0.303,0.043	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.343:0.687,0.283,0.03	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.208:0.795,0.201,0.003	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.3:0.722,0.257,0.022	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.288:0.731,0.249,0.019	0|0:0.124:0.878,0.119,0.003	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.189:0.816,0.178,0.006	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.337:0.691,0.281,0.028	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.703:0.023,0.251,0.726	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.385:0.652,0.311,0.037	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.882:0.239,0.639,0.122	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.76:0.015,0.21,0.775	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.639:0.035,0.291,0.674	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.451:0.614,0.321,0.065	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	1|1:1.846:0.005,0.144,0.851	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.242:0.08,0.599,0.322	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.356:0.674,0.296,0.03	0|0:0.346:0.685,0.285,0.031	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17376429	SNP-3.17375238.	A	G	.	PASS	AR2=0.997;DR2=0.998;AF=0.336	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.876:0.005,0.114,0.881	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.631:0.035,0.299,0.666	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17381846	SNP-3.17380655.	C	A	.	PASS	AR2=0.992;DR2=0.993;AF=0.379	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.059:0.942,0.057,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.143:0.862,0.133,0.005	0|0:0:1,0,0	0|0:0.157:0.849,0.145,0.006	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.19:0.819,0.173,0.009	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.959,0.041,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.136:0.869,0.126,0.005	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.931,0.068,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.134:0.87,0.126,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.137:0.868,0.128,0.004	0|0:0:1,0,0	0|0:0.128:0.876,0.12,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.164:0.843,0.15,0.007	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.105:0.898,0.098,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.148:0.858,0.137,0.005	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17383050	SNP-3.17381859.	A	G	.	PASS	AR2=1;DR2=1;AF=0.268	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17383188	SNP-3.17381997.	C	A	.	PASS	AR2=0.995;DR2=0.997;AF=0.358	GT:DS:GP	0|0:0:1,0,0	1|1:1.313:0.139,0.409,0.452	1|0:1.036:0.063,0.838,0.099	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.885:0.003,0.11,0.887	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17384655	SNP-3.17383464.	C	A	.	PASS	AR2=1;DR2=1;AF=0.346	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17386362	SNP-3.17385171.	A	G	.	PASS	AR2=1;DR2=1;AF=0.352	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17390430	SNP-3.17389239.	A	G	.	PASS	AR2=0.997;DR2=0.997;AF=0.267	GT:DS:GP	0|0:0:1,0,0	0|1:1.191:0.157,0.496,0.347	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.955:0.001,0.044,0.955	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.976:0,0.024,0.976	1|1:1.987:0,0.012,0.987	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.976:0,0.024,0.976	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:1.967:0,0.033,0.967	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17391793	SNP-3.17390602.	C	A	.	PASS	AR2=0.996;DR2=0.996;AF=0.342	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.939,0.059,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.047:0.954,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.128:0.876,0.119,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.712:0.02,0.248,0.732	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.865:0.004,0.128,0.869	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.952:0,0.047,0.953	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.966:0,0.034,0.966	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.038:0.963,0.037,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.958,0.042,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17393979	SNP-3.17392788.	C	A	.	PASS	AR2=0.994;DR2=0.996;AF=0.343	GT:DS:GP	0|0:0:1,0,0	0|0:0.329:0.701,0.27,0.03	0|0:0.331:0.697,0.275,0.028	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.487:0,0.513,0.487	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17394776	SNP-3.17393585.	C	A	.	PASS	AR2=0.987;DR2=0.99;AF=0.343	GT:DS:GP	0|0:0:1,0,0	0|0:0.035:0.966,0.034,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	1|1:2:0,0,1	0|0:0.106:0.897,0.1,0.003	0|0:0:1,0,0	0|0:0.168:0.838,0.156,0.006	1|1:2:0,0,1	0|0:0.025:0.975,0.024,0	0|0:0.094:0.907,0.091,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.118:0.887,0.109,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.945,0.054,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.974:0,0.025,0.975	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.932:0.001,0.066,0.933	1|1:1.694:0.01,0.286,0.704	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.847:0.003,0.146,0.85	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.687:0.446,0.421,0.133	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0,0.021,0.979	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	1|1:1.967:0,0.032,0.968	1|1:1.722:0.019,0.24,0.741	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.947:0.001,0.052,0.947	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.012:0.988,0.012,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.941:0.001,0.057,0.942	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.124:0.879,0.118,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17397474	SNP-3.17396283.	C	A	.	PASS	AR2=0.986;DR2=0.99;AF=0.354	GT:DS:GP	0|0:0:1,0,0	0|0:0.391:0.651,0.308,0.041	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.937:0.001,0.061,0.938	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.346:0.685,0.283,0.031	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.085:0.917,0.081,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:0.396:0.612,0.379,0.008	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.952,0.047,0.001	0|0:0:1,0,0	0|0:0.035:0.965,0.035,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|0:1.554:0.016,0.415,0.57	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.969:0,0.031,0.969	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.742:0.004,0.25,0.746	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.885:0.004,0.108,0.888	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.958,0.042,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.374:0.664,0.299,0.038	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.054:0.947,0.052,0.001	0|0:0:1,0,0	0|0:0.066:0.935,0.064,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.964,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17399578	SNP-3.17398387.	A	G	.	PASS	AR2=0.897;DR2=0.922;AF=0.483	GT:DS:GP	1|1:1.602:0.036,0.326,0.638	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.655:0.031,0.283,0.686	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.751:0.018,0.213,0.769	1|1:1.682:0.022,0.274,0.704	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.434:0.082,0.402,0.516	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.107:0.175,0.542,0.282	0|0:0:1,0,0	0|1:1.424:0.053,0.47,0.477	0|1:1.241:0.131,0.497,0.372	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.451:0.075,0.398,0.527	1|0:1.517:0.06,0.364,0.577	1|1:1.735:0.017,0.232,0.751	1|1:2:0,0,1	1|1:1.586:0.043,0.329,0.629	1|1:2:0,0,1	1|1:1.668:0.027,0.277,0.696	1|1:1.549:0.051,0.35,0.6	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.747:0.016,0.222,0.762	1|1:1.603:0.039,0.32,0.642	1|1:2:0,0,1	1|1:1.534:0.055,0.356,0.589	1|1:1.551:0.049,0.351,0.6	1|1:2:0,0,1	1|1:1.712:0.024,0.24,0.736	1|1:2:0,0,1	1|1:1.656:0.028,0.287,0.684	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.7:0.024,0.253,0.723	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.034:0.967,0.032,0.001	1|1:1.57:0.044,0.341,0.615	1|1:1.58:0.043,0.334,0.623	1|1:1.474:0.07,0.386,0.544	1|1:2:0,0,1	1|1:1.501:0.062,0.376,0.563	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.751:0.017,0.215,0.768	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.026,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.086:0.915,0.085,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.967,0.032,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:1.489:0.064,0.383,0.553	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.548:0.049,0.355,0.597	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.821:0.003,0.173,0.824	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.644:0.03,0.296,0.674	1|1:2:0,0,1	1|0:1.541:0.051,0.356,0.593	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.034:0.967,0.032,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.955:0.228,0.589,0.183	1|1:2:0,0,1	1|1:1.599:0.043,0.315,0.642	1|1:1.88:0.004,0.112,0.884	0|0:0:1,0,0	1|1:1.444:0.076,0.403,0.521	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.702:0.02,0.258,0.722	0|0:0:1,0,0	1|0:1.024:0.238,0.501,0.262	1|1:1.339:0.088,0.485,0.427	1|1:1.428:0.083,0.407,0.511	1|0:1.382:0.058,0.502,0.44	0|1:1.02:0.24,0.499,0.26	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.498:0.061,0.38,0.559	1|1:2:0,0,1	1|1:1.459:0.073,0.394,0.532	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.768:0.011,0.211,0.778	1|1:2:0,0,1	1|1:1.526:0.054,0.366,0.58	0|1:1.5:0.061,0.377,0.562	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.911:0.003,0.083,0.914	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.91:0.003,0.084,0.913	1|1:1.454:0.07,0.406,0.524	1|1:2:0,0,1	1|1:1.747:0.039,0.176,0.785	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.931:0,0.068,0.932	1|1:1.993:0,0.007,0.993	1|1:1.723:0.03,0.216,0.754	1|1:2:0,0,1	1|1:1.613:0.041,0.306,0.654	1|1:2:0,0,1	1|1:1.592:0.047,0.314,0.639	1|1:2:0,0,1	1|1:1.927:0.001,0.07,0.928	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.914:0.003,0.08,0.917	0|0:0:1,0,0	1|0:1.262:0.045,0.649,0.306	1|1:1.445:0.078,0.399,0.523	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.527:0.057,0.359,0.584	0|0:0:1,0,0	1|1:2:0,0,1
+3	17404250	SNP-3.17403059.	A	G	.	PASS	AR2=0.991;DR2=0.993;AF=0.316	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.741:0.017,0.224,0.758	1|1:1.8:0.011,0.178,0.811	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.913:0.001,0.085,0.914	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.905:0.002,0.091,0.907	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.764:0.012,0.212,0.776	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.895:0.002,0.101,0.897	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.697:0.023,0.257,0.72	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.794:0.015,0.177,0.809	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.742:0.017,0.224,0.759	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1
+3	17404496	SNP-3.17403305.	A	G	.	PASS	AR2=0.991;DR2=0.994;AF=0.359	GT:DS:GP	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.127:0.876,0.122,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:1.934:0.002,0.063,0.935	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.599:0.018,0.365,0.617	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.866:0.006,0.123,0.872	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.107:0.896,0.101,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.043:0.958,0.041,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.945:0.001,0.053,0.946	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.686:0.441,0.433,0.127	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1
+3	17404634	SNP-3.17403443.	A	G	.	PASS	AR2=0.997;DR2=0.998;AF=0.275	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.424:0,0.576,0.424	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.97,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.946,0.052,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17404769	SNP-3.17403578.	A	G	.	PASS	AR2=0.994;DR2=0.995;AF=0.259	GT:DS:GP	0|0:0:1,0,0	0|0:0.274:0.746,0.234,0.02	0|0:0.264:0.754,0.228,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.249:0.766,0.219,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.279:0.742,0.237,0.021	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17405633	SNP-3.17404442.	C	A	.	PASS	AR2=0.989;DR2=0.992;AF=0.328	GT:DS:GP	0|0:0:1,0,0	0|1:0.308:0.721,0.25,0.029	0|1:0.391:0.64,0.33,0.03	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.49:0.031,0.448,0.521	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.715:0.022,0.241,0.737	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.599:0.401,0.599,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.284:0.742,0.232,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17407227	SNP-3.17406036.	C	A	.	PASS	AR2=0.962;DR2=0.969;AF=0.373	GT:DS:GP	0|0:0:1,0,0	0|1:0.803:0.36,0.476,0.163	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.375:0.662,0.302,0.036	0|0:0.879:0.313,0.495,0.192	0|1:1:0,1,0	0|0:0.236:0.778,0.209,0.013	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.195:0.812,0.18,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.216:0.797,0.19,0.013	0|0:0.206:0.799,0.196,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.209:0.801,0.189,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.297:0.725,0.253,0.022	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.816:0.005,0.173,0.822	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.885:0.003,0.109,0.888	1|0:1.117:0.128,0.627,0.245	1|0:1.184:0.055,0.706,0.239	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1.146:0.168,0.517,0.314	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.264:0.753,0.231,0.017	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.186:0.828,0.157,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.199:0.806,0.188,0.005	0|0:0.143:0.862,0.134,0.004	0|0:0:1,0,0	0|0:0.361:0.672,0.296,0.032	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.517:0.521,0.441,0.038	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.373:0.663,0.301,0.036	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.802:0.361,0.476,0.163	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.257:0.764,0.215,0.021	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17407646	SNP-3.17406455.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.358	GT:DS:GP	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.251:0.749,0.251,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17407766	SNP-3.17406575.	C	A	.	PASS	AR2=0.994;DR2=0.996;AF=0.359	GT:DS:GP	0|0:0:1,0,0	1|0:1:0,1,0	0|1:0.804:0.345,0.507,0.149	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.616:0.501,0.382,0.117	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17407784	SNP-3.17406593.	C	A	.	PASS	AR2=0.985;DR2=0.987;AF=0.312	GT:DS:GP	0|0:0:1,0,0	0|0:0.194:0.814,0.179,0.008	0|0:0.171:0.84,0.149,0.011	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.293:0.736,0.234,0.03	0|1:1.414:0.028,0.53,0.442	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:0.905:0.3,0.494,0.205	1|1:1.844:0.006,0.145,0.85	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.967:0,0.033,0.967	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.938:0.001,0.06,0.939	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.358:0.093,0.456,0.451	1|1:1.926:0.001,0.072,0.927	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.852:0.004,0.14,0.856	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.133:0.875,0.118,0.007	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.19:0.818,0.173,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	17408862	SNP-3.17407671.	A	G	.	PASS	AR2=0.996;DR2=0.997;AF=0.291	GT:DS:GP	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.256:0.76,0.224,0.016	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.237:0.778,0.208,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.293:0.729,0.249,0.022	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17408911	SNP-3.17407720.	A	G	.	PASS	AR2=1;DR2=1;AF=0.263	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17410405	SNP-3.17409214.	A	G	.	PASS	AR2=0.991;DR2=0.992;AF=0.359	GT:DS:GP	1|0:1:0,1,0	1|1:1.029:0.241,0.489,0.27	0|1:1.033:0.239,0.489,0.272	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.103:0.2,0.497,0.303	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.968:0.001,0.031,0.969	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0.001,0.023,0.976	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.971:0,0.028,0.971	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.406:0.01,0.573,0.417	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	1|1:2:0,0,1
+3	17411943	SNP-3.17410752.	A	G	.	PASS	AR2=0.985;DR2=0.989;AF=0.325	GT:DS:GP	1|0:1:0,1,0	0|0:0.44:0.61,0.339,0.05	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.902:0.003,0.093,0.904	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.829:0.01,0.15,0.839	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.825:0.008,0.159,0.833	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.795:0.011,0.182,0.806	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.742:0.016,0.227,0.758	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.929:0.001,0.07,0.929	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.899:0.003,0.094,0.902	0|0:0:1,0,0	1|1:1.722:0.019,0.239,0.741	0|0:0:1,0,0	1|1:1.784:0.011,0.195,0.795	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.744:0.017,0.223,0.76	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.44:0.61,0.339,0.05	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17412479	SNP-3.17411288.	C	A	.	PASS	AR2=0.958;DR2=0.966;AF=0.294	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|1:0.967:0.128,0.778,0.094	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.083:0.918,0.08,0.002	0|0:0:1,0,0	0|0:0.109:0.894,0.103,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.122:0.88,0.117,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.101:0.899,0.101,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.032:0.969,0.031,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.648:0.026,0.299,0.674	0|1:0.868:0.219,0.693,0.088	0|0:0:1,0,0	1|0:1.43:0.084,0.402,0.514	1|0:0.635:0.403,0.558,0.039	1|0:0.98:0.074,0.871,0.055	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.854:0.003,0.139,0.858	1|0:1.225:0.033,0.709,0.258	1|1:1.844:0.001,0.154,0.845	1|1:1.907:0.001,0.091,0.908	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.478:0.075,0.372,0.553	1|1:2:0,0,1	1|1:1.97:0,0.03,0.97	0|0:0.032:0.968,0.032,0	1|0:0.933:0.195,0.676,0.128	0|0:0:1,0,0	1|1:1.894:0,0.105,0.894	0|0:0:1,0,0	1|0:1.115:0.078,0.728,0.194	1|0:0.82:0.238,0.704,0.058	1|1:1.911:0.002,0.085,0.913	0|0:0:1,0,0	1|1:1.909:0.002,0.087,0.911	0|0:0:1,0,0	1|1:1.875:0.003,0.118,0.878	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.758:0.01,0.222,0.768	1|1:1.933:0.005,0.058,0.937	1|1:1.697:0.022,0.26,0.719	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.879:0.002,0.118,0.88	1|1:1.915:0.002,0.082,0.917	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.438:0.08,0.402,0.518	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.05,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.975:0,0.025,0.975	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.715:0.007,0.27,0.722	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.11:0.895,0.1,0.005	1|1:1.226:0.135,0.504,0.361	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.925:0.005,0.065,0.93	1|1:1.603:0.052,0.294,0.655	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.018,0.981	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.017:0.983,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17415865	SNP-3.17414646.	C	A	.	PASS	AR2=0.931;DR2=0.946;AF=0.281	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|1:0.966:0.251,0.532,0.217	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.148:0.857,0.137,0.005	1|1:2:0,0,1	0|0:0.077:0.925,0.073,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.969,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.949,0.05,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.947,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.084:0.917,0.081,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.165:0.841,0.154,0.005	0|0:0:1,0,0	1|1:1.939:0,0.061,0.939	1|1:2:0,0,1	1|1:1.795:0.011,0.182,0.807	0|0:0.595:0.515,0.375,0.11	1|1:1.714:0.015,0.257,0.729	0|0:0:1,0,0	1|1:1.718:0.008,0.267,0.725	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.288:0.116,0.48,0.404	0|1:1.185:0.168,0.479,0.353	0|0:0:1,0,0	1|0:0.868:0.335,0.463,0.202	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.58:0.071,0.278,0.651	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.799:0.005,0.192,0.803	1|1:1.859:0.001,0.14,0.86	0|0:0.316:0.709,0.267,0.025	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.923:0.001,0.075,0.924	0|0:0:1,0,0	0|0:0.912:0.302,0.483,0.215	0|0:0:1,0,0	1|1:1.669:0.023,0.286,0.692	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.716:0.02,0.244,0.736	0|0:0:1,0,0	1|1:1.739:0.026,0.208,0.765	0|0:0:1,0,0	1|1:1.651:0.031,0.287,0.682	0|0:0:1,0,0	1|1:1.608:0.011,0.37,0.619	1|1:2:0,0,1	1|0:1.529:0.045,0.381,0.574	1|1:1.895:0.011,0.084,0.906	1|0:1.3:0.143,0.413,0.443	0|0:0.495:0.593,0.319,0.088	1|1:1.659:0.057,0.228,0.716	1|1:1.586:0.04,0.334,0.626	1|1:1.782:0.011,0.196,0.793	1|1:2:0,0,1	1|0:1.45:0.036,0.478,0.486	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.937:0.003,0.058,0.939	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.896:0.005,0.093,0.901	0|0:0:1,0,0	0|0:0.113:0.892,0.102,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.163:0.843,0.152,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.475:0.043,0.44,0.518	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.212:0.798,0.192,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.597:0.063,0.278,0.66	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.902:0.004,0.09,0.906	1|1:1.88:0.006,0.108,0.886	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.95:0.003,0.045,0.953	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17419157	SNP-3.17417938.	A	G	.	PASS	AR2=0.933;DR2=0.944;AF=0.305	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.738:0.017,0.228,0.755	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.961,0.039,0	0|0:0:1,0,0	0|0:0.148:0.854,0.143,0.003	0|0:0.054:0.947,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.137:0.867,0.13,0.004	0|0:0:1,0,0	0|0:0.113:0.89,0.106,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.096:0.906,0.092,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.134:0.869,0.128,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.825:0.008,0.159,0.833	1|1:2:0,0,1	1|1:1.795:0.014,0.177,0.809	1|1:1.841:0.008,0.143,0.849	1|1:2:0,0,1	1|1:1.721:0.022,0.234,0.744	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.79:0.012,0.187,0.801	1|1:1.758:0.013,0.215,0.772	1|1:2:0,0,1	1|1:1.768:0.013,0.206,0.781	1|1:2:0,0,1	1|1:1.522:0.038,0.401,0.56	1|1:1.614:0.043,0.3,0.657	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.738:0.012,0.238,0.75	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.945:0.197,0.661,0.142	1|1:2:0,0,1	1|0:1.121:0.167,0.545,0.288	1|1:2:0,0,1	1|1:1.757:0.02,0.204,0.777	1|1:2:0,0,1	0|1:1.146:0.134,0.587,0.28	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.56:0.056,0.328,0.616	1|1:1.814:0.009,0.169,0.823	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.808:0.008,0.175,0.816	1|1:1.699:0.027,0.248,0.725	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.684:0.021,0.273,0.706	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.167:0.185,0.462,0.352	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.717:0.009,0.265,0.726	1|1:1.844:0.007,0.141,0.852	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.649:0.448,0.455,0.097	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.146:0.858,0.138,0.004	0|0:0:1,0,0	1|1:1.8:0.01,0.181,0.81	1|1:1.753:0.014,0.218,0.768	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.729:0.017,0.236,0.747	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.94,0.059,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.739:0.021,0.218,0.76	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.736:0.015,0.234,0.751	1|1:2:0,0,1	1|1:1.729:0.02,0.232,0.749	0|0:0:1,0,0	0|0:0.15:0.855,0.14,0.005	1|1:1.719:0.023,0.235,0.742	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.783:0.011,0.195,0.794	1|1:2:0,0,1	1|1:1.685:0.022,0.271,0.707	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.019,0	1|1:1.297:0.082,0.538,0.379	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.575:0.132,0.162,0.707	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.791:0.011,0.186,0.802	0|1:0.729:0.361,0.549,0.09	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.141:0.864,0.131,0.005	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.814:0.009,0.169,0.822	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.54:0.535,0.389,0.076
+3	17421689	SNP-3.17420470.	C	A	.	PASS	AR2=1;DR2=1;AF=0.364	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17421863	SNP-3.17420644.	C	A	.	PASS	AR2=0.978;DR2=0.983;AF=0.296	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.975,0.024,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.03:0.97,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.943,0.056,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.952,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.575:0.047,0.33,0.622	1|1:1.797:0.008,0.188,0.805	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.844:0.17,0.816,0.014	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.235:0.016,0.734,0.251	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.065:0.06,0.815,0.125	1|1:1.645:0.031,0.294,0.675	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.807:0.209,0.775,0.016	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.885:0.003,0.11,0.888	1|1:2:0,0,1	1|1:1.825:0.013,0.149,0.838	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.068:0.934,0.065,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0.001,0.031,0.969	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0.046:0.955,0.045,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.957,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	0|0:0.053:0.948,0.051,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.829:0.002,0.166,0.832	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.928,0.071,0.001	0|0:0:1,0,0	0|0:0.052:0.949,0.05,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.567:0.049,0.336,0.616	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.91:0.009,0.071,0.92	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.953,0.046,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.547:0.044,0.366,0.591	0|0:0:1,0,0
+3	17425033	SNP-3.17423814.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.368	GT:DS:GP	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.139:0.866,0.129,0.005	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.138:0.866,0.129,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.951,0.049,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.131:0.873,0.122,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.16:0.846,0.147,0.006	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.943,0.056,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.969,0.03,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.089:0.912,0.088,0	1|0:1:0,1,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.945,0.054,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.14:0.865,0.13,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.128:0.876,0.12,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.107:0.896,0.102,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17425659	SNP-3.17424440.	C	A	.	PASS	AR2=1;DR2=1;AF=0.34	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17426889	SNP-3.17425670.	C	A	.	PASS	AR2=1;DR2=1;AF=0.317	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17428070	SNP-3.17426851.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.349	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0.017:0.983,0.017,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.016:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.011,0	0|0:0.016:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0.078:0.923,0.075,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.056:0.945,0.054,0.001	0|0:0.031:0.969,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.009:0,0.991,0.009	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.036:0.965,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.947,0.053,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0.027:0.973,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17428506	SNP-3.17427287.	A	G	.	PASS	AR2=0.925;DR2=0.948;AF=0.438	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.198:0.813,0.176,0.011	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.539:0.533,0.395,0.072	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.484:0.574,0.368,0.058	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.97:0.001,0.029,0.97	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.498:0.564,0.374,0.062	0|1:1:0,1,0	0|0:0.178:0.827,0.168,0.005	0|0:0.045:0.955,0.045,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.432:0.614,0.34,0.046	0|0:0:1,0,0	0|0:0.449:0.602,0.348,0.05	0|0:0.201:0.807,0.184,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.975:0,0.025,0.975	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.481:0.577,0.365,0.058	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.585:0.488,0.44,0.072	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.938,0.06,0.002	0|0:0.03:0.97,0.029,0	0|0:0:1,0,0	0|1:0.716:0.43,0.424,0.146	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.467:0.545,0.442,0.012	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.295:0.723,0.258,0.018	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.547:0.527,0.399,0.074	0|0:0.158:0.85,0.143,0.007	0|0:0:1,0,0	0|0:0.523:0.544,0.388,0.068	0|1:1:0,1,0	0|0:0.481:0.577,0.365,0.058	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.416:0.628,0.328,0.044	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.428:0.618,0.336,0.046	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0.482:0.577,0.365,0.058	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.447:0.602,0.349,0.049	0|0:0.481:0.577,0.365,0.058	0|1:0.481:0.577,0.365,0.058	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	0|0:0.024:0.976,0.024,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.414:0.629,0.329,0.042	1|1:2:0,0,1	0|0:0.455:0.596,0.353,0.051	0|0:0:1,0,0	1|0:0.46:0.593,0.354,0.053	0|0:0.454:0.597,0.351,0.052	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.092:0.912,0.084,0.004	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.942,0.056,0.002	0|0:0.436:0.611,0.343,0.046	0|0:0.481:0.577,0.365,0.058	0|0:0.09:0.913,0.084,0.003	0|0:0.503:0.561,0.376,0.064	0|0:0:1,0,0	0|0:0.084:0.919,0.078,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.061:0.942,0.056,0.002	0|0:0:1,0,0	0|0:0.094:0.909,0.088,0.003	0|0:0:1,0,0	1|1:1.95:0.003,0.044,0.953	1|1:1.656:0.111,0.122,0.767	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.972,0.028,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.084:0.919,0.078,0.003	0|0:0:1,0,0	0|0:0.421:0.623,0.333,0.044	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17430551	SNP-3.17429332.	A	G	.	PASS	AR2=0.989;DR2=0.991;AF=0.235	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.818:0.009,0.163,0.827	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.79:0.012,0.186,0.802	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.811:0.008,0.172,0.819	0|0:0:1,0,0	1|1:1.754:0.015,0.215,0.769	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.772:0.013,0.202,0.785	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.74:0.017,0.226,0.757	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.145:0.881,0.093,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.84:0.006,0.148,0.846	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17431115	SNP-3.17429896.	C	A	.	PASS	AR2=1;DR2=1;AF=0.34	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17432522	SNP-3.17431303.	A	G	.	PASS	AR2=0.939;DR2=0.954;AF=0.292	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.828:0.008,0.157,0.836	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.12:0.2,0.479,0.321	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.417:0.09,0.404,0.507	1|1:2:0,0,1	1|1:1.746:0.018,0.218,0.764	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.926:0.001,0.072,0.927	1|1:1.414:0.086,0.415,0.5	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.656:0.029,0.286,0.685	1|0:1.437:0.082,0.399,0.519	1|1:1.522:0.05,0.379,0.572	1|1:1.695:0.028,0.249,0.723	1|1:2:0,0,1	1|1:1.842:0.006,0.147,0.847	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.823:0.004,0.169,0.827	1|1:1.913:0.001,0.085,0.914	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.521:0.056,0.368,0.577	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.578:0.087,0.248,0.665	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.62:0.033,0.313,0.654	1|1:1.691:0.028,0.254,0.719	1|1:1.596:0.042,0.32,0.638	1|1:2:0,0,1	1|1:1.487:0.057,0.399,0.544	1|1:1.936:0,0.064,0.936	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.532:0.052,0.365,0.584	1|1:1.631:0.034,0.301,0.665	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.455:0.072,0.4,0.528	1|1:1.682:0.024,0.27,0.706	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.644:0.026,0.304,0.67	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.534:0.053,0.36,0.587	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.579:0.046,0.33,0.625	1|1:1.601:0.029,0.341,0.63	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.886:0.002,0.11,0.888	1|1:1.89:0.004,0.102,0.894	1|1:1.596:0.035,0.334,0.631	1|1:1.679:0.023,0.274,0.702	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.589:0.042,0.326,0.631	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17433999	SNP-3.17432780.	C	A	.	PASS	AR2=1;DR2=1;AF=0.35	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.94,0.058,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17435638	SNP-3.17434419.	C	A	.	PASS	AR2=1;DR2=1;AF=0.376	GT:DS:GP	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.955,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17436950	SNP-3.17435731.	C	A	.	PASS	AR2=0.996;DR2=0.996;AF=0.341	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.707:0.018,0.257,0.725	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.833:0.001,0.166,0.834	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.98:0,0.02,0.98	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:1.913:0,0.086,0.914	1|1:1.975:0,0.025,0.975	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.714:0.001,0.284,0.715	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.983:0,0.017,0.983	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17439104	SNP-3.17437885.	A	G	.	PASS	AR2=1;DR2=1;AF=0.259	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.006:0,0.994,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17442289	SNP-3.17441070.	A	G	.	PASS	AR2=0.967;DR2=0.976;AF=0.316	GT:DS:GP	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.153:0.856,0.135,0.009	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.636:0.036,0.291,0.673	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.955,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.695:0.046,0.214,0.74	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.545:0.055,0.344,0.601	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.623:0.032,0.314,0.655	1|1:1.9:0.003,0.095,0.902	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.784:0.015,0.187,0.798	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.547:0.048,0.357,0.595	1|1:1.446:0.076,0.403,0.521	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.627:0.035,0.303,0.662	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.037:0.963,0.036,0	0|0:0.05:0.95,0.05,0	0|0:0.117:0.886,0.111,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.906,0.091,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.57:0.043,0.345,0.613	0|0:0:1,0,0	1|1:1.729:0.016,0.239,0.745	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.139:0.866,0.129,0.005	1|1:1.535:0.056,0.352,0.591	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.733:0.015,0.238,0.747	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.751:0.013,0.223,0.764	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.643:0.043,0.272,0.685	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17443632	SNP-3.17442413.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.245	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.931:0.001,0.066,0.932	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.927:0.001,0.07,0.929	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17447735	SNP-3.17446516.	C	A	.	PASS	AR2=0.985;DR2=0.987;AF=0.301	GT:DS:GP	0|0:0.032:0.968,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.84:0.006,0.147,0.846	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.969,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.955,0.045,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.047:0.113,0.727,0.16	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.665:0.341,0.654,0.005	1|1:1.819:0.011,0.16,0.83	1|0:1:0,1,0	1|0:1.197:0.039,0.726,0.236	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:1.995:0,0.005,0.995	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.818:0.009,0.164,0.827	0|0:0:1,0,0	1|1:1.945:0.001,0.054,0.946	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.873:0.004,0.12,0.876	1|1:1.946:0.001,0.052,0.947	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.967:0,0.032,0.967	1|1:1.911:0.002,0.085,0.913	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.867:0.006,0.12,0.874	1|1:2:0,0,1	1|1:1.912:0.001,0.086,0.913	1|1:2:0,0,1	1|1:1.971:0,0.029,0.971	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.033:0.967,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.926:0.005,0.064,0.931	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.965,0.035,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.941,0.058,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.968,0.032,0	1|1:1.936:0,0.064,0.936	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	1|1:1.866:0,0.133,0.867	1|1:1.89:0.003,0.105,0.893	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0.032:0.968,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.057:0.944,0.055,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17448662	SNP-3.17447443.	C	A	.	PASS	AR2=0.998;DR2=0.999;AF=0.354	GT:DS:GP	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.712:0,0.288,0.712	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17450790	SNP-3.17449571.	C	A	.	PASS	AR2=1;DR2=1;AF=0.348	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17455247	SNP-3.17454028.	A	G	.	PASS	AR2=0.968;DR2=0.977;AF=0.23	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.568:0.055,0.322,0.623	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.555:0.049,0.347,0.604	1|1:1.551:0.05,0.35,0.601	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1.544:0.051,0.355,0.595	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.681:0.021,0.277,0.702	1|0:1:0,1,0	1|1:1.778:0.012,0.199,0.79	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.557:0.049,0.345,0.606	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.594:0.041,0.324,0.635	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.562:0.049,0.341,0.61	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.548:0.052,0.347,0.601	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.93:0.002,0.065,0.933	1|1:1.655:0.033,0.28,0.687	1|1:1.931:0.002,0.066,0.933	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17456410	SNP-3.17455191.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.336	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.957:0.001,0.042,0.958	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.884:0.004,0.109,0.888	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.953:0.001,0.046,0.954	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17457271	SNP-3.17456052.	C	A	.	PASS	AR2=0.992;DR2=0.993;AF=0.392	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.202:0.809,0.181,0.011	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.06:0.941,0.058,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.931,0.068,0.001	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.946,0.054,0.001	0|1:1:0,1,0	0|0:0.101:0.902,0.096,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.079:0.922,0.077,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.973,0.027,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.943:0,0.056,0.944	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.733:0,0.267,0.733	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.839:0.001,0.16,0.839	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.969:0,0.031,0.969	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.149:0.857,0.137,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.061:0.939,0.06,0.001	0|0:0.024:0.976,0.023,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.149:0.857,0.137,0.006	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.067:0.935,0.063,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.164:0.843,0.151,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17461457	SNP-3.17460238.	A	G	.	PASS	AR2=0.853;DR2=0.892;AF=0.25	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.869:0.324,0.483,0.193	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.488:0.566,0.379,0.055	0|0:0:1,0,0	0|0:0.301:0.721,0.257,0.022	0|0:0.468:0.589,0.354,0.057	0|1:1.076:0.185,0.554,0.261	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.294:0.122,0.462,0.416	0|0:0.187:0.822,0.168,0.01	0|0:0.397:0.627,0.35,0.024	0|1:0.509:0.549,0.393,0.058	1|0:1.409:0.043,0.506,0.452	1|1:2:0,0,1	0|1:0.724:0.314,0.648,0.038	0|0:0.402:0.633,0.332,0.035	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.589:0.489,0.433,0.078	0|0:0.806:0.374,0.447,0.18	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.709:0.413,0.465,0.122	0|1:1.079:0.197,0.526,0.277	0|0:0:1,0,0	0|0:0.491:0.565,0.379,0.056	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.879:0.296,0.529,0.175	0|1:1.163:0.121,0.594,0.284	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.526:0.545,0.384,0.071	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.625:0.47,0.436,0.094	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.784:0.355,0.506,0.139	0|0:0:1,0,0	0|1:1.311:0.084,0.521,0.395	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.947:0.322,0.409,0.269	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.091:0.909,0.091,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.614:0.481,0.424,0.095	0|0:0:1,0,0	0|0:0.464:0.591,0.353,0.056	0|0:0:1,0,0	1|1:1.857:0.008,0.126,0.865	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.217:0.143,0.497,0.36	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.167:0.15,0.534,0.317	0|0:0:1,0,0	0|0:0.497:0.58,0.342,0.077	0|0:0:1,0,0	1|1:1.555:0.048,0.349,0.603	1|1:1.581:0.02,0.378,0.602	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.683:0.494,0.33,0.176	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.501:0.557,0.385,0.058	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.6:0.484,0.432,0.084	0|0:0.955:0.236,0.573,0.191	0|0:0.449:0.609,0.332,0.058	0|0:0:1,0,0	0|0:0.129:0.877,0.118,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.477:0.578,0.367,0.055	1|0:0.5:0.556,0.388,0.056	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.297:0.107,0.489,0.404	0|0:0:1,0,0	0|0:0.8:0.353,0.494,0.153	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.696:0.423,0.458,0.119	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.858:0.009,0.124,0.867	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.835:0.013,0.139,0.848	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.488:0.026,0.459,0.515	1|0:0.503:0.553,0.391,0.056	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.512:0.53,0.429,0.041	0|0:0:1,0,0	0|0:0.491:0.571,0.366,0.062	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.708:0.026,0.241,0.734
+3	17461629	SNP-3.17460410.	C	A	.	PASS	AR2=0.987;DR2=0.989;AF=0.331	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:1.976:0,0.023,0.976	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.787:0.008,0.197,0.795	1|1:1.887:0.003,0.108,0.889	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.567:0.012,0.41,0.578	1|1:2:0,0,1	1|1:1.914:0.004,0.077,0.919	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:1.92:0.001,0.078,0.921	1|1:1.795:0.011,0.183,0.806	1|1:2:0,0,1	1|1:1.976:0,0.023,0.976	1|1:2:0,0,1	1|0:0.945:0.055,0.945,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.966:0,0.033,0.967	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.709:0.024,0.243,0.733	1|1:1.954:0.001,0.045,0.954	1|1:1.78:0.012,0.196,0.792	1|1:1.954:0.001,0.045,0.954	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.952:0.001,0.046,0.953	1|1:2:0,0,1	1|1:1.971:0,0.029,0.971	1|1:2:0,0,1	1|1:1.832:0.003,0.162,0.835	1|1:1.914:0.004,0.078,0.918	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.841:0.008,0.144,0.849	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.913:0.001,0.085,0.914	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.853:0.006,0.135,0.859	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:1.805:0.011,0.172,0.816	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0,0.025,0.975	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17461871	SNP-3.17460652.	C	A	.	PASS	AR2=0.971;DR2=0.975;AF=0.438	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.223:0.79,0.197,0.013	0|0:0.285:0.737,0.24,0.023	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.21:0.803,0.185,0.012	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.213:0.798,0.191,0.011	0|0:0.292:0.727,0.255,0.019	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.094:0.909,0.087,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.185:0.824,0.166,0.009	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.199:0.811,0.179,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.247:0.769,0.215,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.138:0.867,0.129,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.222:0.791,0.196,0.013	0|0:0:1,0,0	0|0:0.273:0.746,0.235,0.019	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.054:0.947,0.052,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.03:0.971,0.028,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.297:0.724,0.254,0.021	0|0:0.3:0.722,0.257,0.022	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.133:0.871,0.126,0.003	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.05:0.95,0.05,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.185:0.826,0.163,0.011	1|0:1:0,1,0	0|0:0.209:0.804,0.184,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.195:0.817,0.172,0.011	0|0:0.267:0.751,0.231,0.018	0|0:0:1,0,0	0|0:0.213:0.799,0.188,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.237:0.777,0.209,0.014	0|0:0.256:0.761,0.222,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.082:0.92,0.078,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.226:0.787,0.2,0.013	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.057:0.944,0.054,0.001	0|0:0:1,0,0	0|0:0.06:0.942,0.057,0.001	0|0:0.073:0.928,0.07,0.002	0|0:0.06:0.941,0.058,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.234:0.779,0.207,0.014	1|1:2:0,0,1	0|0:0.222:0.791,0.196,0.013	0|0:0:1,0,0	0|0:0.199:0.812,0.176,0.011	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17462093	SNP-3.17460874.	A	G	.	PASS	AR2=0.994;DR2=0.996;AF=0.347	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.599:0.156,0.088,0.755	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	0|1:1:0,1,0	1|1:1.966:0.001,0.033,0.966	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.537:0.009,0.445,0.546	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.943:0.001,0.055,0.944	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17462213	SNP-3.17460994.	C	A	.	PASS	AR2=0.997;DR2=0.998;AF=0.335	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.507:0.002,0.489,0.509	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.944:0,0.056,0.944	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.817:0.004,0.174,0.821	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17462855	SNP-3.17461636.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.336	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.93:0.002,0.067,0.931	1|0:1:0,1,0	1|1:1.997:0,0.002,0.998	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.933:0.002,0.063,0.935	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17464258	SNP-3.17463039.	A	G	.	PASS	AR2=0.993;DR2=0.994;AF=0.364	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.116:0.887,0.109,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.595:0.153,0.099,0.748	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.974:0,0.026,0.974	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.901:0.004,0.092,0.905	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.195:0.815,0.175,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.195:0.815,0.175,0.01	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.133:0.871,0.126,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17465300	SNP-3.17464081.	C	A	.	PASS	AR2=0.988;DR2=0.99;AF=0.288	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.887:0.003,0.107,0.89	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.27:0.085,0.559,0.356	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1.176:0.052,0.719,0.229	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:0.925:0.077,0.922,0.002	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.018:0.982,0.018,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.875:0.004,0.117,0.879	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.005:0.12,0.755,0.125	1|1:1.888:0.004,0.105,0.891	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.852:0.005,0.137,0.857	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.894:0.003,0.1,0.897	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.931:0.001,0.067,0.932	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.685:0.006,0.302,0.692	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.749:0.005,0.24,0.754	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17466511	SNP-3.17465292.	C	A	.	PASS	AR2=0.962;DR2=0.971;AF=0.285	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.172:0.179,0.471,0.351	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.774:0.016,0.194,0.79	1|1:2:0,0,1	0|1:1.452:0.069,0.411,0.521	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.702:0.016,0.266,0.718	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.071:0.933,0.063,0.004	1|0:1.219:0.135,0.511,0.354	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.594:0.044,0.319,0.637	0|0:0:1,0,0	0|1:1.177:0.175,0.472,0.353	1|1:1.731:0.015,0.239,0.746	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.267:0.125,0.483,0.392	1|1:2:0,0,1	1|1:1.717:0.03,0.224,0.746	0|0:0:1,0,0	1|1:1.705:0.025,0.246,0.729	1|1:1.924:0.003,0.069,0.927	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.833:0.008,0.151,0.841	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.915:0,0.085,0.915	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.11:0.896,0.097,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.745:0.018,0.22,0.763	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.737:0.014,0.236,0.751	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.331:0.133,0.403,0.464	1|1:1.73:0.018,0.233,0.748	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.446:0.098,0.358,0.544	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.955:0.002,0.041,0.957	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17466634	SNP-3.17465415.	C	A	.	PASS	AR2=0.99;DR2=0.992;AF=0.357	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.954:0.001,0.045,0.955	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.979:0,0.021,0.979	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.934,0.065,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.047:0.954,0.046,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.03:0.97,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.388:0.012,0.589,0.4	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.963:0,0.036,0.963	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.933:0.002,0.062,0.935	1|1:1.71:0.009,0.271,0.72	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.949:0.001,0.049,0.95	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.954:0.001,0.044,0.955	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.96:0.001,0.038,0.961	0|0:0:1,0,0	1|1:1.969:0,0.03,0.969	1|1:1.966:0,0.033,0.966	1|1:1.938:0,0.062,0.938	1|1:1.948:0,0.051,0.948	1|1:2:0,0,1	1|1:1.962:0,0.038,0.962	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.958:0,0.041,0.959	1|1:1.971:0,0.028,0.971	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.774:0.004,0.217,0.779	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.977:0,0.023,0.977	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.209:0,0.791,0.209	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.96,0.039,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.955:0,0.044,0.955	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.938:0.002,0.059,0.94	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.139:0.862,0.137,0.001	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0.002:0.998,0.002,0	1|1:1.971:0,0.029,0.971	0|0:0:1,0,0
+3	17467370	SNP-3.17466151.	C	A	.	PASS	AR2=0.993;DR2=0.995;AF=0.366	GT:DS:GP	0|0:0.013:0.987,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.932,0.067,0.002	0|0:0.043:0.957,0.043,0	0|0:0.026:0.974,0.026,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0.037:0.963,0.037,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.05,0.001	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.035:0.965,0.034,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0.042:0.959,0.041,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.404:0.005,0.586,0.409	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	1|1:1.745:0,0.255,0.745	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.066:0.936,0.061,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.956,0.043,0.002	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.019:0.981,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.932,0.065,0.003	1|1:2:0,0,1	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0.002:0.998,0.002,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.14:0.861,0.138,0.001	0|0:0.039:0.962,0.037,0.001	0|0:0.022:0.979,0.021,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0
+3	17467718	SNP-3.17466499.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.35	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.142:0.007,0.843,0.15	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17467753	SNP-3.17466534.	A	G	.	PASS	AR2=0.939;DR2=0.949;AF=0.253	GT:DS:GP	0|0:0.109:0.894,0.103,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.115:0.889,0.107,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.323:0.111,0.456,0.434	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.157:0.849,0.144,0.006	0|0:0:1,0,0	1|1:1.563:0.049,0.338,0.612	0|0:0.242:0.774,0.21,0.016	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.73:0.036,0.198,0.766	1|0:1.311:0.118,0.452,0.43	1|1:1.87:0.005,0.12,0.875	0|0:0.363:0.637,0.363,0	1|1:1.823:0.009,0.16,0.831	1|1:2:0,0,1	1|1:1.231:0.15,0.468,0.381	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.171:0.839,0.151,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.148:0.858,0.136,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.109:0.895,0.102,0.004	0|0:0.157:0.849,0.145,0.006	0|0:0:1,0,0	0|0:0.139:0.866,0.129,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.159:0.848,0.145,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.159:0.848,0.146,0.007	0|0:0:1,0,0	1|1:1.825:0.008,0.159,0.833	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.356:0.062,0.52,0.418	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.952,0.047,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.945,0.054,0.001	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0.164:0.849,0.138,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.168:0.839,0.154,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.94,0.058,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.697:0.031,0.24,0.729	1|1:2:0,0,1	0|0:0.133:0.873,0.121,0.006	0|1:1.319:0.118,0.446,0.436	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.81:0.009,0.171,0.819	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.856:0.005,0.133,0.862	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.253:0.151,0.445,0.404	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.663:0.029,0.278,0.692	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.248:0.144,0.465,0.392	0|0:0:1,0,0	1|1:1.79:0.011,0.188,0.801	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.805:0.009,0.177,0.814	0|0:0.135:0.869,0.126,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.959,0.04,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.038:0.963,0.037,0	0|0:0:1,0,0	0|0:0.013:0.987,0.012,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.746:0.016,0.221,0.763	1|1:1.825:0.008,0.16,0.832	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.872:0.005,0.118,0.877	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.869:0.005,0.121,0.874	1|1:1.772:0.012,0.204,0.784	1|1:1.615:0.048,0.289,0.663	0|0:0:1,0,0	0|0:0.128:0.875,0.121,0.003	0|0:0.033:0.967,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17468835	SNP-3.17467616.	A	G	.	PASS	AR2=0.983;DR2=0.986;AF=0.258	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.659:0.387,0.566,0.047	1|1:1.893:0.007,0.094,0.899	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.968:0,0.031,0.968	1|1:1.975:0,0.024,0.976	1|1:1.622:0.037,0.304,0.659	1|1:2:0,0,1	1|1:1.9:0.003,0.094,0.903	1|1:1.968:0,0.031,0.969	1|1:2:0,0,1	1|1:1.903:0.001,0.094,0.904	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.963,0.037,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.121:0.883,0.113,0.004	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.31:0.703,0.283,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.09:0.912,0.085,0.003	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.978,0.022,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.959,0.041,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.616:0.023,0.338,0.639	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.861:0.005,0.13,0.866	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.917:0.002,0.08,0.918	1|1:2:0,0,1	1|1:1.678:0.024,0.274,0.702	1|1:1.919:0.001,0.078,0.921	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.921:0.002,0.076,0.922	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.041:0.959,0.04,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17474014	SNP-3.17472795.	C	A	.	PASS	AR2=0.997;DR2=0.997;AF=0.349	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.628:0.04,0.291,0.668	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.805:0.01,0.175,0.815	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.977:0,0.023,0.977	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.931:0.001,0.068,0.932	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17476491	SNP-3.17475272.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.36	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0.046:0.954,0.045,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.947,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.043:0.957,0.042,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.027,0.973	1|1:2:0,0,1	1|1:1.949:0,0.051,0.949	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.044:0.956,0.043,0	0|0:0.036:0.964,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.954,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.952:0,0.048,0.952	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.962,0.037,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17480016	SNP-3.17478797.	A	G	.	PASS	AR2=0.866;DR2=0.902;AF=0.209	GT:DS:GP	0|0:0.357:0.669,0.305,0.026	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.293:0.154,0.398,0.447	0|0:0:1,0,0	0|0:0.186:0.824,0.166,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.858:0.288,0.565,0.147	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.532:0.546,0.376,0.078	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.069:0.259,0.413,0.328	0|0:0.111:0.893,0.103,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.327:0.701,0.271,0.028	0|0:0.116:0.887,0.11,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.335:0.697,0.27,0.032	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.568:0.507,0.417,0.076	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.441:0.6,0.358,0.042	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.927,0.07,0.003	0|0:0:1,0,0	0|0:0.553:0.513,0.421,0.066	0|0:0.486:0.566,0.382,0.052	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.015:0.228,0.529,0.243	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.806:0.282,0.63,0.088	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.714:0.344,0.597,0.058	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.779:0.356,0.51,0.134	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.497:0.547,0.408,0.044	0|0:0:1,0,0	1|0:1.08:0.207,0.506,0.287	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.783:0.371,0.475,0.154	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.62:0.447,0.486,0.067	0|0:0.147:0.861,0.132,0.008	0|0:0.229:0.791,0.19,0.019	0|0:0.437:0.615,0.332,0.052	0|0:0.124:0.881,0.113,0.006	0|0:0.052:0.949,0.05,0.001	0|1:0.536:0.503,0.457,0.04	1|1:2:0,0,1	0|0:0.518:0.546,0.39,0.064	0|0:0:1,0,0	0|0:0.447:0.604,0.345,0.051	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.65:0.017,0.317,0.667	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.111:0.889,0.111,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.187:0.822,0.169,0.009	1|1:2:0,0,1	1|0:1.099:0.149,0.603,0.248	0|0:0.059:0.942,0.057,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.819:0.415,0.351,0.234	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.459:0.598,0.346,0.056	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.516:0.603,0.279,0.118	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.309:0.714,0.264,0.022	0|0:0:1,0,0	0|0:0.507:0.557,0.379,0.064	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.271:0.13,0.47,0.4	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.324:0.705,0.266,0.029	0|0:0:1,0,0	0|0:0.05:0.951,0.048,0.001	0|0:0.253:0.765,0.216,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.356:0.675,0.294,0.031	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.445:0.604,0.347,0.049	1|1:2:0,0,1	1|0:0.86:0.338,0.464,0.198	0|0:0:1,0,0
+3	17488862	SNP-3.17487643.	A	G	.	PASS	AR2=0.93;DR2=0.944;AF=0.295	GT:DS:GP	1|1:1.647:0.031,0.292,0.678	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.099:0.904,0.093,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.075:0.927,0.072,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.94,0.058,0.001	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.696:0.025,0.255,0.72	1|1:1.65:0.033,0.285,0.682	1|1:1.681:0.025,0.27,0.706	1|1:1.535:0.054,0.357,0.589	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.569:0.044,0.344,0.612	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.72:0.021,0.239,0.741	1|1:1.728:0.019,0.234,0.747	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.808:0.012,0.167,0.821	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.697:0.023,0.256,0.72	1|1:1.193:0.113,0.581,0.306	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.431:0.075,0.418,0.507	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:0.831:0.341,0.486,0.173	1|1:2:0,0,1	1|1:1.511:0.061,0.366,0.573	1|1:1.712:0.022,0.244,0.734	0|0:0.105:0.898,0.099,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.649:0.027,0.298,0.676	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.492:0.631,0.245,0.124	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.727:0.019,0.234,0.747	0|0:0:1,0,0	1|1:1.731:0.019,0.232,0.749	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.209:0.801,0.189,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.596:0.059,0.287,0.655	1|1:1.68:0.024,0.272,0.704	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.118:0.886,0.11,0.004	0|0:0.226:0.786,0.201,0.013	1|1:1.741:0.017,0.224,0.758	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.698:0.021,0.26,0.719	0|1:1:0,1,0	0|0:0.164:0.846,0.145,0.009	0|0:0:1,0,0	1|1:1.606:0.041,0.312,0.647	0|0:0.099:0.903,0.094,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.833:0.01,0.147,0.843	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.905,0.092,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.74:0.017,0.226,0.757	1|1:1.689:0.023,0.266,0.711	1|1:2:0,0,1	1|1:1.711:0.021,0.246,0.732	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.732:0.019,0.229,0.751	1|1:1.718:0.02,0.241,0.739	1|1:1.707:0.023,0.247,0.73	1|1:2:0,0,1	1|1:1.736:0.018,0.228,0.754	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.541:0.051,0.356,0.593	1|1:1.69:0.024,0.262,0.714	0|0:0:1,0,0	1|1:2:0,0,1
+3	17489382	SNP-3.17488163.	C	A	.	PASS	AR2=0.959;DR2=0.969;AF=0.318	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.946,0.053,0	0|0:0.246:0.758,0.239,0.003	0|0:0:1,0,0	0|0:0.31:0.707,0.276,0.017	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.095:0.907,0.091,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.079:0.923,0.076,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.906,0.092,0.002	0|0:0:1,0,0	0|0:0.419:0.62,0.34,0.039	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.121:0.882,0.116,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.185:0.822,0.171,0.007	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.074:0.928,0.071,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.876:0.002,0.12,0.878	1|1:1.621:0.025,0.329,0.646	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.778:0.361,0.499,0.139	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.588:0.041,0.331,0.629	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.548:0.034,0.384,0.582	0|1:1.437:0.077,0.41,0.513	1|1:1.527:0.013,0.448,0.539	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.242:0.17,0.418,0.412	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.467:0.076,0.381,0.543	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.893:0.002,0.102,0.896	1|1:1.99:0,0.01,0.99	1|1:1.622:0.028,0.321,0.65	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.061:0.94,0.06,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.09:0.912,0.086,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.21:0.792,0.206,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.095:0.907,0.091,0.002	1|1:2:0,0,1	0|0:0.132:0.869,0.13,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.096:0.906,0.092,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.084:0.918,0.08,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.932,0.067,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.09:0.912,0.086,0.002	0|0:0.301:0.708,0.284,0.008	0|0:0:1,0,0	0|0:0.087:0.915,0.083,0.002	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.079:0.923,0.076,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.72:0.023,0.234,0.743	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.96:0.002,0.037,0.962	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17489992	SNP-3.17488773.	A	G	.	PASS	AR2=0.992;DR2=0.994;AF=0.228	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.108:0.897,0.099,0.004	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.948:0.001,0.05,0.949	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.966,0.034,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.6:0.431,0.537,0.032	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.306:0.7,0.293,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.145:0.861,0.134,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.22:0.033,0.714,0.253	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17493182	SNP-3.17491963.	A	G	.	PASS	AR2=0.961;DR2=0.97;AF=0.315	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.868:0.005,0.122,0.873	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.844:0.007,0.142,0.851	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.696:0.019,0.266,0.715	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.844:0.006,0.144,0.85	1|1:2:0,0,1	0|1:1.437:0.071,0.421,0.508	1|1:1.678:0.025,0.273,0.702	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.743:0.013,0.23,0.757	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.588:0.088,0.236,0.676	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.729:0.019,0.233,0.748	1|1:2:0,0,1	0|1:1.087:0.188,0.537,0.275	1|0:1:0,1,0	0|0:0.183:0.827,0.163,0.01	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.676:0.033,0.258,0.709	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.591:0.032,0.344,0.624	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.587:0.057,0.299,0.644	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.513:0.063,0.361,0.576	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.606:0.049,0.296,0.655	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:0.83:0.238,0.694,0.068	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.447:0.073,0.408,0.519	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.86:0.005,0.13,0.865	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.869:0.005,0.121,0.874	1|1:1.838:0.007,0.148,0.845	1|1:1.861:0.005,0.129,0.866	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.851:0.005,0.138,0.857	1|1:2:0,0,1	1|1:1.867:0.005,0.123,0.872	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0
+3	17493629	SNP-3.17492410.	C	A	.	PASS	AR2=0.995;DR2=0.996;AF=0.389	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	1|1:2:0,0,1	0|0:0.251:0.76,0.229,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.035:0.007,0.951,0.042	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.014:0.986,0.014,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.27:0.747,0.235,0.017	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.06:0.941,0.058,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.977:0,0.022,0.978	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0.083:0.918,0.082,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.05:0.951,0.049,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.07:0.932,0.066,0.002	0|0:0:1,0,0	0|0:0.063:0.939,0.06,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.012,0.987	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17493657	SNP-3.17492438.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.373	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.113:0.89,0.107,0.003	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.1:0.902,0.095,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.956,0.043,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.53:0.002,0.466,0.532	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.92:0.002,0.076,0.922	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.033:0.968,0.031,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.955:0.001,0.043,0.956	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.151:0.855,0.14,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.927:0,0.072,0.927	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.982:0,0.017,0.983	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.112:0.891,0.107,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.923:0.001,0.074,0.925	0|0:0:1,0,0
+3	17506280	SNP-3.17505061.	A	G	.	PASS	AR2=0.997;DR2=0.998;AF=0.388	GT:DS:GP	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.563:0.517,0.402,0.08	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.946:0.006,0.042,0.952	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17506439	SNP-3.17505220.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.387	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.702:0.305,0.689,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17506741	SNP-3.17505522.	A	G	.	PASS	AR2=0.939;DR2=0.958;AF=0.507	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.5:0.062,0.376,0.562	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.569:0.037,0.356,0.606	0|1:1:0,1,0	1|1:1.544:0.052,0.351,0.597	1|1:2:0,0,1	1|1:1.554:0.05,0.347,0.604	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.356:0.098,0.448,0.454	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1.259:0.142,0.457,0.401	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.64:0.027,0.306,0.667	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.593:0.041,0.325,0.634	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.849:0.011,0.13,0.86	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.76:0.011,0.218,0.771	0|0:0:1,0,0	0|1:1.525:0.038,0.399,0.563	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.772:0.012,0.203,0.785	1|0:1:0,1,0	1|1:1.491:0.099,0.31,0.591	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.564:0.048,0.339,0.612	0|0:0:1,0,0	1|1:1.522:0.057,0.365,0.579	1|1:1.524:0.056,0.364,0.58	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.56:0.039,0.362,0.599	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.608:0.036,0.319,0.645	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.52:0.045,0.389,0.565	1|1:1.784:0.005,0.206,0.789	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.351:0.073,0.503,0.424	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.598:0.043,0.316,0.641	0|0:0:1,0,0	1|0:1.563:0.048,0.34,0.611	0|0:0:1,0,0	1|1:1.494:0.066,0.374,0.56	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.538:0.053,0.356,0.591	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.979:0,0.021,0.979	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:1.977:0,0.023,0.977	1|1:2:0,0,1	1|1:1.564:0.045,0.346,0.609	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.566:0.048,0.338,0.614	0|0:0:1,0,0	1|1:1.822:0.015,0.147,0.838	1|1:2:0,0,1	1|1:1.751:0.02,0.209,0.771	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17507104	SNP-3.17505885.	A	G	.	PASS	AR2=0.975;DR2=0.981;AF=0.324	GT:DS:GP	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.723:0.02,0.237,0.743	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.691:0.024,0.261,0.715	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.668:0.029,0.275,0.696	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.61:0.03,0.329,0.64	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.681:0.026,0.267,0.707	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.681:0.026,0.267,0.707	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.657:0.029,0.285,0.686	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.658:0.029,0.284,0.687	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.67:0.028,0.275,0.698	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.657:0.029,0.284,0.686	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.695:0.025,0.256,0.72	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.697:0.023,0.258,0.719	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.679:0.026,0.268,0.706	1|1:2:0,0,1	1|1:1.656:0.029,0.285,0.686	0|0:0:1,0,0	1|0:1:0,1,0
+3	17508035	SNP-3.17506816.	C	A	.	PASS	AR2=0.991;DR2=0.993;AF=0.367	GT:DS:GP	0|0:0:1,0,0	0|0:0.717:0.415,0.454,0.132	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.364:0.636,0.364,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.717:0.415,0.454,0.132	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.959:0.001,0.039,0.96	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.717:0.415,0.454,0.132	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17508310	SNP-3.17507091.	A	G	.	PASS	AR2=0.997;DR2=0.997;AF=0.23	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.944:0.001,0.054,0.945	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.96,0.039,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.963,0.035,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.041:0.959,0.041,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.271:0.024,0.682,0.294	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.02:0.98,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17508325	SNP-3.17507106.	C	A	.	PASS	AR2=0.976;DR2=0.982;AF=0.428	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.541:0.055,0.348,0.596	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.099:0.903,0.094,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.115:0.889,0.108,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.102:0.901,0.097,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.107:0.896,0.102,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.275:0.742,0.241,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.276:0.735,0.255,0.011	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.257:0.756,0.23,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.211:0.792,0.206,0.003	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.377:0.66,0.303,0.037	0|0:0:1,0,0	0|0:0.496:0.56,0.383,0.057	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.992:0,0.007,0.992	1|1:2:0,0,1	0|0:0.345:0.688,0.279,0.033	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.472:0.587,0.355,0.059	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.961:0,0.039,0.961	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:1.974:0,0.025,0.974	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.629:0.398,0.574,0.028	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.115:0.889,0.108,0.003	0|1:1:0,1,0	0|0:0.099:0.904,0.093,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.057:0.944,0.054,0.002	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.109:0.894,0.103,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.1:0.903,0.095,0.003	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0.1:0.902,0.095,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.1:0.903,0.095,0.003	1|1:2:0,0,1	0|0:0.06:0.941,0.057,0.002	0|0:0.174:0.832,0.161,0.006	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17509187	SNP-3.17507968.	C	A	.	PASS	AR2=0.977;DR2=0.98;AF=0.397	GT:DS:GP	0|0:0:1,0,0	0|1:1:0,1,0	0|1:0.839:0.352,0.456,0.192	1|1:1.933:0.002,0.063,0.935	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.905:0.002,0.091,0.907	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.369:0.658,0.315,0.027	0|0:0.043:0.957,0.042,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.258:0.749,0.243,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.109:0.896,0.099,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.288:0.728,0.255,0.017	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.189:0.818,0.175,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.082:0.919,0.08,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.158:0.849,0.145,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.18:0.83,0.161,0.01	0|0:0.077:0.924,0.076,0	0|0:0.162:0.839,0.159,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.22:0.792,0.196,0.012	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.897:0.003,0.097,0.9	1|0:1:0,1,0	0|0:0.149:0.858,0.135,0.007	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.91:0.002,0.087,0.912	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.165:0.842,0.151,0.007	0|0:0.316:0.709,0.267,0.025	0|0:0.022:0.978,0.021,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.189:0.82,0.172,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.251:0.766,0.217,0.017	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.119:0.887,0.107,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.062:0.938,0.062,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.838:0.353,0.455,0.191	1|1:2:0,0,1	0|0:0.085:0.918,0.079,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.971,0.029,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17509214	SNP-3.17507995.	A	G	.	PASS	AR2=0.98;DR2=0.985;AF=0.363	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.687:0.031,0.251,0.718	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.974:0,0.026,0.974	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.813:0.007,0.174,0.82	1|1:2:0,0,1	1|1:1.766:0.017,0.2,0.783	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.87:0.001,0.128,0.871	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.663:0.028,0.281,0.691	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.907:0,0.092,0.908	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.924,0.075,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.022,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0.068:0.933,0.066,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1.525:0.05,0.375,0.575	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.083:0.919,0.08,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.786:0.014,0.185,0.8	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.817:0.004,0.175,0.821	1|1:2:0,0,1	1|1:1.63:0.022,0.325,0.653	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.435:0.061,0.443,0.496	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.785:0.006,0.204,0.79	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.807:0.006,0.18,0.813	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.926:0.001,0.072,0.927	1|1:1.763:0.016,0.206,0.779	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17509298	SNP-3.17508079.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.385	GT:DS:GP	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.106:0.898,0.099,0.004	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.947:0.001,0.051,0.948	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0,0.025,0.975	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.939:0.001,0.06,0.939	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17509481	SNP-3.17508262.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.391	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.095:0.907,0.09,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.026,0.974	1|1:1.944:0.001,0.054,0.945	1|1:2:0,0,1	1|1:1.903:0.001,0.094,0.905	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.952:0.001,0.047,0.953	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.982:0,0.017,0.983	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.091:0.911,0.087,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.084:0.918,0.08,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.961:0,0.038,0.962	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17511061	SNP-3.17509842.	C	A	.	PASS	AR2=0.979;DR2=0.982;AF=0.333	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.945:0,0.054,0.946	1|1:1.942:0.001,0.055,0.944	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.937,0.061,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.927:0.002,0.069,0.929	1|1:1.952:0.001,0.047,0.953	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.271:0.178,0.374,0.448	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.823:0.008,0.161,0.831	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.931:0,0.069,0.931	1|1:1.931:0.001,0.066,0.932	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.902:0.002,0.094,0.904	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.88:0.003,0.113,0.884	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.872:0.004,0.12,0.876	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.841:0.007,0.146,0.848	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.902:0.003,0.092,0.905	1|1:2:0,0,1	1|1:1.801:0.007,0.185,0.808	1|1:1.856:0.006,0.132,0.862	1|1:1.727:0.017,0.24,0.743	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.843:0.008,0.141,0.851	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.925:0.002,0.071,0.927	0|1:1:0,1,0	1|1:1.858:0.008,0.126,0.866	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.95,0.05,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.766:0.007,0.219,0.773	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.903:0.003,0.091,0.906	1|1:1.845:0.007,0.142,0.852	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.889:0.005,0.1,0.894	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.952:0.001,0.046,0.953	1|1:1.909:0.003,0.086,0.911	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.881:0.004,0.111,0.885	1|1:1.966:0.001,0.032,0.967	1|1:1.829:0.009,0.153,0.838	1|1:2:0,0,1	1|1:1.953:0.001,0.045,0.954	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.843:0.008,0.141,0.851	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17511335	SNP-3.17510116.	C	A	.	PASS	AR2=0.992;DR2=0.994;AF=0.329	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.976:0,0.024,0.976	1|1:1.958:0,0.041,0.959	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.56:0.05,0.339,0.611	1|0:1:0,1,0	1|0:1.333:0.039,0.59,0.372	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.011:0.989,0.011,0	1|1:1.782:0.012,0.194,0.794	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.759:0.008,0.225,0.767	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.923:0.002,0.074,0.924	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17511446	SNP-3.17510227.	C	A	.	PASS	AR2=0.99;DR2=0.991;AF=0.332	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.883:0.002,0.112,0.885	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.64:0.003,0.353,0.644	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.974:0,0.026,0.974	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.946:0.001,0.052,0.947	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.935:0.001,0.062,0.936	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.86:0.01,0.12,0.87	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.913:0.002,0.082,0.916	1|1:1.944:0.001,0.054,0.945	1|1:1.86:0.005,0.129,0.865	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.955:0.001,0.043,0.956	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.919:0.002,0.077,0.921	1|1:1.936:0.002,0.061,0.937	1|1:2:0,0,1	1|1:1.937:0.001,0.061,0.938	1|1:1.97:0,0.03,0.97	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.879:0.002,0.117,0.881	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.973:0,0.027,0.973	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.948:0.001,0.05,0.949	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.873:0.002,0.123,0.875	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.969:0.001,0.029,0.97	1|1:1.947:0.001,0.051,0.948	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.764:0.07,0.097,0.834	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.926:0.002,0.07,0.928	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.878:0.002,0.119,0.88	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17511694	SNP-3.17510475.	C	A	.	PASS	AR2=0.974;DR2=0.979;AF=0.326	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.172:0.837,0.153,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.174:0.838,0.149,0.012	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.393:0.659,0.289,0.052	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.97,0.03,0	1|0:1:0,1,0	0|0:0.309:0.702,0.287,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.061:0.94,0.058,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.092:0.909,0.089,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0.099:0.904,0.093,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.335:0.035,0.596,0.369	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.816:0.198,0.787,0.014	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.123:0.878,0.121,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.133:0.87,0.128,0.003	0|1:1.231:0.15,0.469,0.381	0|0:0.071:0.931,0.068,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.941:0,0.059,0.941	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.034:0.967,0.033,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.692:0.012,0.284,0.704	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.702:0.028,0.241,0.731	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.13:0.876,0.118,0.006	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.937,0.062,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.31:0.698,0.294,0.008	0|1:1:0,1,0	0|0:0.057:0.944,0.055,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.948:0,0.051,0.948	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.079:0.922,0.077,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.593:0.054,0.299,0.647	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.144:0.865,0.126,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	17512310	SNP-3.17511091.	C	A	.	PASS	AR2=1;DR2=1;AF=0.383	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17512568	SNP-3.17511349.	A	G	.	PASS	AR2=1;DR2=1;AF=0.228	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17519704	SNP-3.17518485.	A	G	.	PASS	AR2=0.987;DR2=0.99;AF=0.402	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.29:0.731,0.247,0.021	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.273:0.745,0.237,0.018	0|0:0:1,0,0	0|0:0.289:0.732,0.247,0.021	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.277:0.742,0.239,0.019	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.301:0.702,0.295,0.003	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.1:0.908,0.085,0.008	0|0:0:1,0,0	0|0:0.103:0.904,0.089,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.279:0.741,0.24,0.019	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.284:0.736,0.244,0.02	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.262:0.755,0.228,0.017	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.936:0,0.063,0.936	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17520597	SNP-3.17519378.	A	G	.	PASS	AR2=0.985;DR2=0.987;AF=0.232	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.822:0.008,0.162,0.83	0|0:0.017:0.983,0.017,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.8:0.01,0.18,0.81	1|1:2:0,0,1	1|1:1.822:0.008,0.162,0.83	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.822:0.008,0.162,0.83	0|1:1:0,1,0	0|0:0.091:0.914,0.08,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.956,0.044,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.077:0.924,0.075,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.158:0.848,0.145,0.006	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.795:0.011,0.183,0.806	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.946,0.053,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.803:0.01,0.178,0.812	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.124:0.882,0.111,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.822:0.008,0.162,0.83	1|1:1.804:0.01,0.177,0.813	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.12:0.884,0.112,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17520692	SNP-3.17519473.	C	A	.	PASS	AR2=0.915;DR2=0.947;AF=0.431	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.353:0.678,0.292,0.03	1|1:2:0,0,1	0|0:0.575:0.509,0.408,0.084	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.14:0.865,0.13,0.005	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.575:0.509,0.408,0.084	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.572:0.511,0.406,0.083	0|0:0.365:0.672,0.291,0.037	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.647:0.459,0.435,0.106	0|0:0.628:0.471,0.431,0.099	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0.575:0.509,0.408,0.084	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.575:0.509,0.408,0.084	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.153:0.852,0.143,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.096:0.906,0.091,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.079:0.922,0.076,0.002	0|0:0.069:0.932,0.067,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.523:0.541,0.395,0.064	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:0.604:0.489,0.418,0.093	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.079:0.923,0.076,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.573:0.51,0.407,0.083	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.608:0.483,0.426,0.091	0|0:0:1,0,0	0|1:1:0,1,0	0|1:0.635:0.466,0.432,0.102	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.137:0.867,0.129,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.57:0.512,0.405,0.083	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0.64:0.463,0.433,0.103	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.081:0.922,0.076,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.593:0.495,0.417,0.088	0|0:0.57:0.512,0.405,0.083	0|0:0.572:0.511,0.406,0.083	0|0:0.575:0.509,0.408,0.084	0|1:0.622:0.475,0.428,0.097	0|0:0.581:0.504,0.411,0.085	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.609:0.482,0.427,0.091	1|0:0.62:0.475,0.429,0.095	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.108:0.896,0.1,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.647:0.459,0.435,0.106	0|0:0.104:0.898,0.101,0.002	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17522136	SNP-3.17520917.	C	A	.	PASS	AR2=1;DR2=1;AF=0.383	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.038:0.962,0.038,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.962,0.038,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.038:0.962,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17523387	SNP-3.17522168.	C	A	.	PASS	AR2=1;DR2=1;AF=0.374	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17524099	SNP-3.17522880.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.369	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.801:0,0.198,0.801	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17524982	SNP-3.17523763.	C	A	.	PASS	AR2=0.985;DR2=0.988;AF=0.352	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.822:0.001,0.176,0.823	1|1:2:0,0,1	1|1:1.92:0.002,0.077,0.922	1|1:1.907:0.002,0.09,0.909	0|0:0.037:0.964,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.79:0.013,0.183,0.804	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.825:0.008,0.158,0.834	1|1:1.661:0.027,0.286,0.688	1|1:2:0,0,1	1|1:1.841:0.006,0.147,0.847	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	1|1:1.9:0.003,0.094,0.903	1|1:1.716:0.022,0.241,0.738	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.948:0,0.052,0.948	0|0:0:1,0,0	1|1:1.777:0.013,0.198,0.79	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.829:0.006,0.158,0.835	1|1:2:0,0,1	1|1:1.867:0.004,0.126,0.871	1|1:1.83:0.007,0.157,0.837	0|0:0:1,0,0	1|1:1.699:0.024,0.253,0.723	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.822:0.007,0.164,0.829	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.886:0.004,0.106,0.89	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.964,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.936:0.001,0.061,0.937	1|1:1.96:0.001,0.039,0.961	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17527062	SNP-3.17525843.	C	A	.	PASS	AR2=0.992;DR2=0.992;AF=0.39	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.893:0,0.107,0.893	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.066:0.935,0.064,0.001	0|0:0.07:0.931,0.068,0.001	1|0:1:0,1,0	0|0:0.049:0.952,0.047,0.001	1|1:1.895:0,0.105,0.895	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.935,0.064,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.066:0.935,0.064,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.066:0.935,0.064,0.001	0|0:0:1,0,0	0|0:0.066:0.935,0.064,0.001	0|0:0.066:0.935,0.064,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.066:0.935,0.064,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0.014:0.986,0.014,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0.034:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.101:0.901,0.097,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.033:0,0.967,0.033	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.031:0.969,0.031,0	0|0:0.039:0.962,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.066:0.935,0.064,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.935,0.064,0.001	0|0:0.066:0.935,0.064,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.973,0.027,0	0|0:0.066:0.935,0.064,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.935,0.064,0.001	0|0:0.066:0.935,0.064,0.001	0|0:0.066:0.935,0.064,0.001	0|0:0.066:0.935,0.064,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.963,0.036,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.066:0.935,0.064,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.935,0.064,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.935,0.064,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17527717	SNP-3.17526498.	C	A	.	PASS	AR2=0.985;DR2=0.99;AF=0.375	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.885:0,0.115,0.885	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0,0.024,0.976	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.979:0,0.021,0.979	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.961:0.001,0.038,0.962	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.996:0.004,0.996,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.388:0.653,0.305,0.042	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.474:0.583,0.36,0.057	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.388:0.653,0.305,0.042	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.47:0.586,0.358,0.056	0|0:0.182:0.833,0.152,0.015	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.388:0.653,0.305,0.042	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.412:0.633,0.321,0.045	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17528096	SNP-3.17526877.	A	G	.	PASS	AR2=0.992;DR2=0.993;AF=0.247	GT:DS:GP	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.059:0.945,0.051,0.004	1|1:2:0,0,1	0|1:1.194:0.144,0.519,0.337	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.028:0.973,0.027,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.953:0.001,0.045,0.954	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.957,0.043,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.429:0.013,0.545,0.442	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.953:0.001,0.045,0.954	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.953:0.001,0.045,0.954	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.073:0.928,0.071,0.001	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.955,0.044,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17529059	SNP-3.17527840.	C	A	.	PASS	AR2=0.968;DR2=0.973;AF=0.414	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.892:0,0.108,0.892	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.142:0.863,0.132,0.005	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.142:0.863,0.132,0.005	0|0:0.203:0.824,0.15,0.027	0|0:0.142:0.863,0.132,0.005	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.142:0.863,0.132,0.005	0|0:0:1,0,0	0|0:0.142:0.863,0.132,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.142:0.863,0.132,0.005	0|0:0:1,0,0	0|0:0.142:0.863,0.132,0.005	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.222:0.791,0.196,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.398:0.623,0.357,0.021	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.05,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.971,0.029,0	0|0:0:1,0,0	0|0:0.299:0.711,0.278,0.011	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.142:0.863,0.132,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0.142:0.863,0.132,0.005	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|0:1.019:0,0.98,0.019	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.071:0,0.929,0.071	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.234:0.779,0.209,0.013	1|1:2:0,0,1	0|0:0.08:0.923,0.074,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.145:0.866,0.123,0.011	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.189:0.819,0.172,0.008	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.177:0.833,0.156,0.01	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.329:0.723,0.224,0.053	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.142:0.863,0.132,0.005	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.142:0.863,0.132,0.005	0|0:0:1,0,0	0|0:0.142:0.863,0.132,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.142:0.863,0.132,0.005	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.142:0.863,0.132,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.142:0.863,0.132,0.005	0|0:0.142:0.863,0.132,0.005	0|0:0.049:0.952,0.047,0.001	1|0:1:0,1,0	0|0:0.296:0.726,0.251,0.022	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.197:0.81,0.184,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.261:0.757,0.225,0.018	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.142:0.863,0.132,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.066:0.936,0.061,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.142:0.863,0.132,0.005	0|0:0:1,0,0	0|0:0.142:0.863,0.132,0.005	0|0:0.142:0.863,0.132,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.977,0.023,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.142:0.863,0.132,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.269:0.749,0.232,0.018	0|0:0.09:0.912,0.086,0.002	1|1:2:0,0,1	0|0:0:1,0,0
+3	17532885	SNP-3.17531666.	C	A	.	PASS	AR2=0.966;DR2=0.966;AF=0.491	GT:DS:GP	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|0:1.042:0.23,0.499,0.272	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1.042:0.23,0.499,0.272	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1.042:0.23,0.499,0.272	1|0:0.974:0.261,0.504,0.235	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.042:0.23,0.499,0.272	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.967:0,0.032,0.968	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1.042:0.23,0.499,0.272	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1.042:0.23,0.499,0.272	0|1:1:0,1,0	0|1:1.042:0.23,0.499,0.272	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.042:0.23,0.499,0.272	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1.042:0.23,0.499,0.272	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1.042:0.23,0.499,0.272	0|1:1:0,1,0	1|0:1.042:0.23,0.499,0.272	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1.042:0.23,0.499,0.272	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1.042:0.23,0.499,0.272	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17533563	SNP-3.17532344.	C	A	.	PASS	AR2=0.996;DR2=0.996;AF=0.37	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.039:0.961,0.038,0	0|0:0:1,0,0	0|0:0.039:0.962,0.038,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.039:0.961,0.038,0	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.039:0.961,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.962,0.038,0	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0	0|0:0.039:0.961,0.038,0	0|0:0.039:0.961,0.038,0	0|0:0:1,0,0	0|0:0.035:0.966,0.034,0	0|0:0.039:0.961,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.033,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.019:0,0.981,0.019	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.966,0.034,0	0|0:0.039:0.961,0.038,0	0|0:0.039:0.961,0.038,0	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.039:0.961,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17534470	SNP-3.17533251.	C	A	.	PASS	AR2=0.999;DR2=1;AF=0.348	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.983:0,0.016,0.984	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.983:0,0.016,0.983	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.946:0,0.054,0.946	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	17535552	SNP-3.17534333.	A	G	.	PASS	AR2=1;DR2=1;AF=0.376	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17535974	SNP-3.17534755.	C	A	.	PASS	AR2=1;DR2=1;AF=0.374	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.02:0.981,0.019,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17537337	SNP-3.17536118.	A	G	.	PASS	AR2=1;DR2=1;AF=0.366	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17537864	SNP-3.17536645.	C	A	.	PASS	AR2=1;DR2=1;AF=0.372	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17539868	SNP-3.17538649.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.246	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.078:0.922,0.078,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.095:0.907,0.091,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.072:0.931,0.067,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17544513	SNP-3.17543294.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.35	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.91:0.002,0.086,0.912	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.948,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.965:0,0.034,0.966	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.979:0,0.021,0.979	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.054:0.947,0.052,0.001	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.979:0,0.02,0.979	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17548078	SNP-3.17546859.	C	A	.	PASS	AR2=0.958;DR2=0.968;AF=0.319	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.572:0.047,0.333,0.62	1|1:1.331:0.154,0.361,0.485	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:1.641:0.029,0.301,0.67	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.882:0.006,0.105,0.888	1|1:2:0,0,1	1|1:1.761:0.001,0.237,0.762	1|1:1.866:0.005,0.124,0.871	0|1:1.599:0.038,0.324,0.637	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.602:0.041,0.315,0.644	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.572:0.048,0.333,0.62	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.863:0.007,0.123,0.87	1|1:1.89:0.006,0.098,0.896	1|1:1.915:0.001,0.083,0.916	0|0:0:1,0,0	1|1:1.662:0.028,0.282,0.69	0|0:0:1,0,0	1|1:1.67:0.018,0.295,0.688	0|0:0:1,0,0	1|1:1.722:0.021,0.236,0.743	1|1:1.521:0.059,0.361,0.58	1|1:2:0,0,1	1|1:1.673:0.025,0.277,0.698	0|0:0:1,0,0	1|1:1.602:0.039,0.32,0.641	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.697:0.017,0.27,0.713	1|1:2:0,0,1	1|1:1.827:0.004,0.165,0.831	1|1:2:0,0,1	1|1:1.877:0.006,0.111,0.883	1|1:1.848:0.005,0.141,0.854	1|1:1.924:0.001,0.074,0.925	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.883:0.003,0.111,0.886	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.666:0.016,0.302,0.682	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.901:0.005,0.09,0.906	1|1:1.72:0.023,0.233,0.744	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:1.497:0.187,0.129,0.684	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.752:0.014,0.22,0.766	0|0:0:1,0,0
+3	17548141	SNP-3.17546922.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.224	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.953:0.001,0.046,0.953	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.943:0.001,0.055,0.944	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17549444	SNP-3.17548225.	C	A	.	PASS	AR2=0.99;DR2=0.991;AF=0.378	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.095:0.907,0.091,0.002	0|0:0:1,0,0	1|1:1.882:0.003,0.112,0.885	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.076:0.925,0.073,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.094:0.908,0.09,0.002	0|0:0:1,0,0	0|0:0.094:0.908,0.09,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.087:0.915,0.083,0.002	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.113:0.89,0.107,0.003	0|0:0:1,0,0	0|0:0.079:0.923,0.075,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.943,0.055,0.001	0|0:0.083:0.919,0.08,0.002	0|1:1:0,1,0	0|0:0.084:0.918,0.08,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.108:0.895,0.102,0.003	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.961:0.001,0.038,0.961	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.97:0,0.03,0.97	1|1:1.937:0.001,0.061,0.938	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.205:0.809,0.177,0.014	1|1:2:0,0,1	0|0:0.08:0.922,0.075,0.003	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:1.972:0,0.028,0.972	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.153:0.853,0.141,0.006	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.159:0.848,0.146,0.006	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.906,0.092,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.133:0.873,0.121,0.006	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	17552952	SNP-3.17551733.	A	G	.	PASS	AR2=0.858;DR2=0.87;AF=0.313	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.148:0.857,0.139,0.005	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.214:0.179,0.428,0.393	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.004:0.224,0.548,0.228	1|1:1.202:0.191,0.415,0.393	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.703:0.42,0.456,0.124	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|1:0.703:0.42,0.456,0.124	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.704:0.42,0.456,0.124	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.703:0.42,0.456,0.124	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.076:0.214,0.495,0.291	0|0:0:1,0,0	1|1:1.089:0.211,0.489,0.3	1|1:1.247:0.149,0.455,0.396	1|0:1.087:0.207,0.5,0.293	1|0:1.143:0.18,0.497,0.323	1|1:2:0,0,1	1|1:1.153:0.183,0.48,0.337	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.273:0.127,0.473,0.4	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.157:0.179,0.485,0.336	0|0:0:1,0,0	0|1:1.131:0.19,0.489,0.321	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.979:0.312,0.396,0.292	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:1.112:0.199,0.49,0.311	1|1:2:0,0,1	1|0:1.108:0.199,0.495,0.307	0|1:0.751:0.385,0.479,0.136	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.071:0.216,0.497,0.287	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.119:0.193,0.495,0.312	1|0:1.108:0.199,0.494,0.307	1|1:2:0,0,1	1|0:1.15:0.181,0.488,0.331	0|0:0:1,0,0	1|1:1.112:0.199,0.49,0.311	0|0:0:1,0,0	0|0:1.11:0.2,0.49,0.31	0|0:0:1,0,0	1|1:1.287:0.127,0.458,0.415	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.703:0.42,0.456,0.124	0|0:0:1,0,0	0|0:0.805:0.353,0.489,0.158	1|0:0.703:0.42,0.456,0.124	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.048:0.228,0.496,0.276	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.202:0.161,0.476,0.363	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.632:0.368,0.632,0	0|0:0:1,0,0	1|0:0.703:0.42,0.456,0.124	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.173:0.172,0.484,0.344	0|0:0.034:0.966,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.112:0.196,0.496,0.308	1|1:1.252:0.137,0.473,0.39	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.703:0.42,0.456,0.124	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.703:0.42,0.456,0.124	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|1:1.075:0.21,0.504,0.286	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.227:0.796,0.182,0.022	0|0:0:1,0,0	0|0:0.108:0.895,0.102,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.703:0.42,0.456,0.124	1|0:0.703:0.42,0.456,0.124	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.703:0.42,0.456,0.124	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.703:0.42,0.456,0.124	1|1:1.629:0.071,0.229,0.7	1|1:1.127:0.23,0.413,0.357	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.111:0.199,0.49,0.311	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.111:0.2,0.49,0.31	0|1:1.069:0.218,0.496,0.287	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.026:0.24,0.494,0.266	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.956,0.044,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.069:0.216,0.499,0.285	0|0:0:1,0,0	0|0:0:1,0,0	0|0:1.143:0.186,0.486,0.329
+3	17554980	SNP-3.17553761.	C	A	.	PASS	AR2=1;DR2=1;AF=0.37	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17559872	SNP-3.17558653.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.321	GT:DS:GP	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.972,0.028,0	0|0:0:1,0,0	0|0:0.027:0.973,0.026,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.812:0.031,0.125,0.843	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.95:0,0.049,0.951	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.091:0.913,0.083,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17560581	SNP-3.17559362.	A	G	.	PASS	AR2=0.973;DR2=0.978;AF=0.28	GT:DS:GP	0|0:0.33:0.674,0.322,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.15:0.855,0.141,0.005	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.886:0.003,0.107,0.89	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.882:0.004,0.111,0.886	1|1:2:0,0,1	1|1:1.886:0.003,0.107,0.889	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.093:0.909,0.089,0.002	0|0:0.028:0.972,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.192:0.818,0.172,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.201:0.808,0.182,0.009	0|0:0.194:0.817,0.172,0.011	0|0:0:1,0,0	0|0:0.155:0.849,0.147,0.004	0|0:0.169:0.838,0.154,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.165:0.842,0.151,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.161:0.039,0.761,0.2	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.967:0.299,0.434,0.266	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.04:0.961,0.038,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.865:0.004,0.128,0.869	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.163:0.837,0.162,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.627:0.457,0.46,0.083	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.144:0.86,0.135,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.954,0.044,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.54:0.558,0.344,0.098	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.886:0.003,0.107,0.89	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.834:0.009,0.148,0.843	0|0:0:1,0,0	0|0:0.165:0.843,0.148,0.008	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17561005	SNP-3.17559786.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.372	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.062:0.939,0.059,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.035:0.965,0.035,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.614:0.395,0.595,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.033:0.968,0.032,0.001	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.958,0.042,0.001	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.029:0.971,0.028,0	0|0:0:1,0,0	0|0:0.172:0.834,0.159,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17561063	SNP-3.17559844.	A	G	.	PASS	AR2=0.997;DR2=0.997;AF=0.233	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.844:0.006,0.144,0.85	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.866:0.006,0.123,0.871	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.933,0.065,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.014:0.071,0.845,0.085	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17561435	SNP-3.17560216.	C	A	.	PASS	AR2=0.94;DR2=0.95;AF=0.478	GT:DS:GP	0|0:0.288:0.712,0.287,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.735:0.401,0.463,0.136	0|0:0:1,0,0	1|0:0.713:0.414,0.458,0.127	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.742:0.395,0.469,0.137	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.717:0.412,0.459,0.129	0|0:0:1,0,0	0|0:0.719:0.411,0.46,0.129	0|1:0.72:0.41,0.46,0.13	0|0:0.296:0.755,0.194,0.051	1|1:2:0,0,1	0|1:0.722:0.406,0.465,0.128	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.157:0.845,0.153,0.002	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0.127:0.875,0.123,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.231:0.783,0.203,0.014	0|0:0.716:0.413,0.459,0.128	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.729:0.405,0.462,0.133	1|0:0.693:0.429,0.45,0.121	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.722:0.409,0.46,0.131	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.776:0.013,0.198,0.789	0|1:0.696:0.426,0.451,0.122	1|1:2:0,0,1	0|0:0.762:0.384,0.47,0.146	1|0:0.755:0.386,0.473,0.141	1|0:0.656:0.451,0.443,0.107	0|0:0:1,0,0	0|0:0.776:0.378,0.469,0.154	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.143:0.859,0.139,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.233:0.778,0.21,0.011	0|0:0.706:0.419,0.457,0.125	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.713:0.414,0.458,0.127	0|1:0.703:0.421,0.455,0.124	0|0:0:1,0,0	0|1:0.694:0.428,0.45,0.122	1|1:2:0,0,1	0|0:0.694:0.428,0.45,0.122	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.697:0.426,0.451,0.123	0|1:0.695:0.427,0.451,0.122	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17561589	SNP-3.17560370.	A	G	.	PASS	AR2=0.994;DR2=0.995;AF=0.231	GT:DS:GP	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.233:0.772,0.222,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.19:0.81,0.19,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0.041:0.959,0.041,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.152:0.862,0.124,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.931:0.001,0.068,0.931	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.138:0.862,0.138,0	0|0:0.025:0.975,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17561662	SNP-3.17560443.	C	A	.	PASS	AR2=0.988;DR2=0.99;AF=0.412	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.755:0.011,0.222,0.766	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.082:0.919,0.079,0.002	1|1:1.827:0,0.173,0.827	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.058:0.943,0.056,0.001	0|0:0.057:0.944,0.056,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.947,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.222:0.781,0.215,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.178:0.824,0.174,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.041:0.959,0.041,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.119:0.895,0.091,0.014	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.147:0.857,0.139,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.523:0.079,0.319,0.602	0|1:1:0,1,0	0|0:0.059:0.942,0.058,0.001	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.169:0.852,0.128,0.02	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.14:0.868,0.124,0.008	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.978,0.021,0.001	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.064:0.937,0.062,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.25:0.763,0.223,0.013	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17562785	SNP-3.17561566.	C	A	.	PASS	AR2=1;DR2=1;AF=0.344	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17562831	SNP-3.17561612.	C	A	.	PASS	AR2=0.987;DR2=0.991;AF=0.318	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.707:0.032,0.229,0.739	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.03:0.97,0.03,0	0|0:0:1,0,0	0|0:0.036:0.964,0.036,0	0|0:0.03:0.971,0.029,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.493:0.032,0.443,0.525	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1.414:0.028,0.53,0.442	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.886:0.003,0.107,0.889	1|1:2:0,0,1	1|1:1.956:0,0.044,0.956	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.964,0.036,0	0|0:0:1,0,0	0|0:0.11:0.892,0.106,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.031:0.969,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.969,0.031,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.896:0.004,0.097,0.899	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.497:0.086,0.331,0.583	0|0:0:1,0,0
+3	17562934	SNP-3.17561715.	A	G	.	PASS	AR2=0.99;DR2=0.992;AF=0.349	GT:DS:GP	1|1:1.74:0.001,0.259,0.74	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.202:0.09,0.619,0.292	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1.131:0.148,0.573,0.279	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.899:0.001,0.099,0.9	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.756:0.023,0.199,0.779	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.908:0.005,0.083,0.913	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.824:0.005,0.166,0.829	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.721:0.017,0.244,0.739	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17563063	SNP-3.17561844.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.339	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.956,0.043,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.254:0.746,0.254,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.212:0.788,0.212,0	0|0:0:1,0,0	0|0:0.057:0.943,0.057,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|0:1:0,1,0	1|1:1.989:0,0.011,0.989	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.948:0.002,0.048,0.95	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.898:0.107,0.887,0.006	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.953:0,0.046,0.954	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.966:0.001,0.033,0.966	1|1:1.994:0,0.006,0.994	1|1:1.988:0,0.011,0.989	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:1.996:0,0.004,0.996	1|1:1.993:0,0.007,0.993	1|1:1.986:0,0.014,0.986	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.199:0.801,0.199,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.88:0,0.12,0.88	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.951,0.048,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.964:0.001,0.035,0.965	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17563250	SNP-3.17562031.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.354	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.063:0.937,0.063,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.079:0.924,0.073,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17563979	SNP-3.17562760.	C	A	.	PASS	AR2=0.979;DR2=0.985;AF=0.416	GT:DS:GP	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.251:0.77,0.209,0.021	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.026:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.268:0.752,0.228,0.02	1|1:2:0,0,1	0|0:0.328:0.702,0.269,0.03	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0.119:0.885,0.111,0.004	1|0:0.62:0.492,0.396,0.112	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.052:0.949,0.05,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.11:0.893,0.103,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.963,0.037,0	0|0:0.188:0.821,0.17,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.941,0.058,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.37:0.667,0.297,0.037	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:0.374:0.655,0.316,0.029	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0.407:0.63,0.333,0.037	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.117:0.886,0.111,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.467:0.579,0.374,0.047	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.929,0.068,0.003	0|0:0:1,0,0	0|0:0.091:0.912,0.085,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.955,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17564067	SNP-3.17562848.	C	A	.	PASS	AR2=0.99;DR2=0.992;AF=0.351	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.349:0.674,0.302,0.023	0|0:0:1,0,0	0|0:0.075:0.926,0.074,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.693:0.019,0.27,0.711	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	0|0:0.312:0.714,0.26,0.026	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.098:0.902,0.098,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.173:0.833,0.16,0.007	0|0:0.332:0.695,0.278,0.027	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.109:0.891,0.109,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.062:0.939,0.061,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17565100	SNP-3.17563881.	C	A	.	PASS	AR2=0.963;DR2=0.973;AF=0.388	GT:DS:GP	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.973:0,0.027,0.973	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.063:0.938,0.061,0.001	0|0:0:1,0,0	0|0:0.089:0.913,0.085,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.089:0.913,0.085,0.002	0|0:0.397:0.644,0.314,0.042	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.936,0.063,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0.038:0.963,0.036,0.001	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.767:0.384,0.465,0.151	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.279:0.733,0.255,0.012	0|0:0.628:0.464,0.443,0.093	0|0:0:1,0,0	1|0:0.558:0.448,0.546,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.174:0.05,0.725,0.224	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1.094:0.096,0.714,0.19	1|1:1.765:0.021,0.193,0.786	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.803:0.012,0.172,0.815	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.39:0.629,0.352,0.019	1|1:1.855:0.005,0.136,0.859	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.941:0,0.058,0.942	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.7:0.03,0.24,0.73	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.413:0.611,0.365,0.024	0|0:0:1,0,0	0|1:0.606:0.488,0.418,0.094	0|0:0.026:0.975,0.025,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.09:0.912,0.086,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.129:0.875,0.121,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0.457:0.572,0.399,0.029	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.158:0.847,0.149,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.687:0.429,0.456,0.116	0|0:0:1,0,0	0|0:0.036:0.964,0.036,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17565577	SNP-3.17564358.	A	G	.	PASS	AR2=0.872;DR2=0.906;AF=0.469	GT:DS:GP	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.265:0.147,0.442,0.412	1|1:2:0,0,1	1|0:1.233:0.113,0.541,0.346	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.714:0.046,0.193,0.761	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1.301:0.112,0.475,0.413	0|1:1:0,1,0	1|1:1.835:0.009,0.148,0.843	0|0:0:1,0,0	1|1:1.466:0.037,0.46,0.503	1|1:2:0,0,1	1|0:1.346:0.06,0.535,0.406	1|1:1.623:0.045,0.286,0.669	1|1:1.611:0.033,0.323,0.644	1|0:1.242:0.082,0.593,0.325	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.256:0.129,0.486,0.385	1|0:1:0,1,0	1|0:1.029:0.237,0.497,0.266	1|1:1.98:0,0.019,0.98	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.518:0.021,0.44,0.539	1|1:1.37:0.073,0.484,0.443	1|0:1.369:0.047,0.538,0.415	1|1:1.93:0.003,0.064,0.933	0|1:0.94:0.196,0.668,0.136	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.006:0.052,0.891,0.057	0|0:0.694:0.458,0.391,0.152	0|1:1.346:0.108,0.437,0.455	1|1:1.999:0,0.001,0.999	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.969:0,0.031,0.969	0|0:0:1,0,0	0|1:1.452:0.024,0.5,0.476	0|0:0.634:0.462,0.443,0.096	1|1:1.747:0.01,0.232,0.757	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.518:0.057,0.368,0.575	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	1|1:1.817:0,0.182,0.817	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:0.815:0.382,0.42,0.198	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.143:0.063,0.732,0.205	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.324:0.067,0.541,0.391	1|1:2:0,0,1	1|0:0.731:0.391,0.487,0.122	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1.343:0.034,0.589,0.377	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.311:0.091,0.507,0.402	0|0:0.356:0.69,0.264,0.046	0|0:0:1,0,0	1|0:0.695:0.36,0.585,0.055	1|1:2:0,0,1	1|1:1.437:0.084,0.395,0.521	1|0:0.953:0.278,0.491,0.231	1|1:1.361:0.103,0.434,0.463	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.229:0.156,0.459,0.385	1|1:1.864:0.007,0.121,0.871	1|1:1.719:0.014,0.254,0.733	1|0:0.924:0.284,0.507,0.209	1|1:1.36:0.105,0.429,0.465	1|0:1.465:0.056,0.422,0.521	0|0:0.864:0.306,0.525,0.17	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.367:0.095,0.443,0.462	1|0:0.653:0.427,0.493,0.08	0|0:0:1,0,0	1|0:1.149:0.076,0.699,0.225	1|1:2:0,0,1	0|0:0.656:0.41,0.523,0.066	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.791:0.374,0.462,0.165	0|0:0:1,0,0	1|0:1.359:0.091,0.459,0.45	0|0:0:1,0,0	0|1:1.174:0.16,0.506,0.334	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1.153:0.208,0.431,0.361	0|1:1.422:0.012,0.554,0.434	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.413:0.077,0.433,0.49	1|1:1.863:0.007,0.124,0.869	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.897:0.003,0.098,0.899	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.931:0.002,0.064,0.934	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.654:0.456,0.435,0.109	1|1:1.331:0.123,0.424,0.453	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17566239	SNP-3.17565020.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.324	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.06:0.028,0.884,0.088	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1.07:0.012,0.906,0.082	1|1:1.64:0.009,0.342,0.649	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.864:0.003,0.129,0.868	0|0:0:1,0,0	1|1:1.946:0.002,0.05,0.948	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1.251:0.014,0.721,0.265	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.918:0.001,0.081,0.919	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.974:0,0.026,0.974	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.926:0.001,0.072,0.927	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	17569115	SNP-3.17567896.	C	A	.	PASS	AR2=0.95;DR2=0.955;AF=0.443	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.194:0.806,0.193,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:0.808:0.363,0.465,0.172	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:0.855:0.328,0.489,0.183	0|1:1:0,1,0	0|1:0.88:0.314,0.493,0.193	0|0:0.221:0.82,0.139,0.041	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.24:0.122,0.517,0.362	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.899:0.303,0.494,0.202	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:0.853:0.329,0.489,0.182	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:0.837:0.335,0.492,0.173	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.605:0.479,0.436,0.085	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.854:0.329,0.489,0.182	0|1:0.871:0.319,0.491,0.19	1|0:0.849:0.331,0.488,0.18	1|0:0.85:0.331,0.488,0.181	0|1:0.849:0.332,0.488,0.18	0|0:0.849:0.332,0.488,0.18	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:0.849:0.332,0.488,0.18	0|1:0.849:0.332,0.488,0.18	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.797:0.362,0.479,0.159	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.881:0.309,0.502,0.19	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17569291	SNP-3.17568072.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.326	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.103:0.903,0.091,0.006	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.639:0.003,0.354,0.642	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.828:0.001,0.17,0.829	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.802:0,0.197,0.803	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.04:0.004,0.952,0.044	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.977:0,0.023,0.977	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	17571662	SNP-3.17570443.	A	G	.	PASS	AR2=0.955;DR2=0.968;AF=0.259	GT:DS:GP	0|0:0:1,0,0	1|0:1.344:0.096,0.464,0.44	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.487:0.114,0.286,0.6	0|0:0:1,0,0	1|1:1.772:0.011,0.205,0.783	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.507:0.062,0.369,0.569	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.644:0.028,0.3,0.672	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.805:0.011,0.172,0.817	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.62:0.035,0.31,0.655	1|0:1.406:0.083,0.428,0.489	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.961:0.002,0.035,0.963	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.861:0.011,0.117,0.872	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.72:0.022,0.236,0.742	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1.411:0.091,0.408,0.502	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.835:0.009,0.147,0.844	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.565:0.056,0.323,0.621	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.658:0.592,0.158,0.25	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.147:0.179,0.495,0.326	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.626:0.029,0.316,0.655	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17572718	SNP-3.17571499.	C	A	.	PASS	AR2=0.998;DR2=0.999;AF=0.345	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.579:0.421,0.579,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17575636	SNP-3.17574417.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.317	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:0.898:0.279,0.544,0.177	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.615:0.009,0.366,0.624	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1.296:0.054,0.597,0.349	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17576639	SNP-3.17575420.	A	G	.	PASS	AR2=0.934;DR2=0.95;AF=0.465	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.694:0.389,0.528,0.083	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.956:0.001,0.041,0.957	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.242:0.139,0.479,0.382	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.932:0.001,0.066,0.933	1|1:2:0,0,1	0|1:0.773:0.335,0.558,0.107	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.338:0.055,0.552,0.393	1|1:2:0,0,1	0|1:1.321:0.086,0.507,0.407	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.858:0.317,0.509,0.174	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.45:0.023,0.504,0.473	1|1:2:0,0,1	0|0:0.784:0.369,0.478,0.153	1|1:1.886:0.002,0.11,0.888	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.893:0,0.106,0.894	0|1:1.101:0.204,0.492,0.304	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.946:0.246,0.563,0.191	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1.045:0.214,0.528,0.258	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.278:0.124,0.473,0.402	1|1:1.317:0.087,0.508,0.404	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.313:0.112,0.463,0.425	1|1:1.952:0.002,0.045,0.954	0|1:0.922:0.288,0.503,0.21	0|1:1:0,1,0	0|0:0.655:0.472,0.401,0.127	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.292:0.108,0.493,0.399	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.625:0.465,0.445,0.09	0|1:0.952:0.273,0.502,0.225	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.001:0.344,0.311,0.345	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.51:0.057,0.375,0.568	1|1:2:0,0,1	1|1:1.749:0.017,0.218,0.766	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.434:0.087,0.393,0.52	0|0:0:1,0,0	1|0:0.949:0.277,0.497,0.226	0|0:0:1,0,0	1|1:1.871:0.003,0.122,0.875	0|0:0:1,0,0	1|1:2:0,0,1
+3	17576948	SNP-3.17575729.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.298	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.746:0.008,0.237,0.755	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.862:0.005,0.129,0.866	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.603:0.036,0.324,0.639	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:0.978:0.169,0.683,0.147	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	17576971	SNP-3.17575752.	A	G	.	PASS	AR2=0.915;DR2=0.941;AF=0.53	GT:DS:GP	1|1:1.796:0.003,0.197,0.8	1|1:1.432:0.08,0.408,0.512	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.219:0.163,0.454,0.382	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.539:0.045,0.372,0.583	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.315:0.122,0.441,0.437	1|1:1.586:0.032,0.35,0.618	1|1:2:0,0,1	1|1:1.402:0.077,0.443,0.48	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.508:0.056,0.38,0.564	1|1:1.636:0.046,0.272,0.682	1|1:1.734:0.012,0.241,0.746	1|1:1.474:0.034,0.459,0.508	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.613:0.018,0.35,0.632	1|1:1.28:0.117,0.486,0.397	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.427:0.06,0.452,0.488	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.532:0.041,0.385,0.573	1|1:1.681:0.009,0.302,0.689	1|1:1.741:0.021,0.218,0.761	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.439:0.081,0.4,0.52	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	0|0:0:1,0,0	1|1:1.818:0.003,0.175,0.821	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.478:0.068,0.386,0.546	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.373:0.045,0.537,0.418	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1.137:0.045,0.774,0.181	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.978:0,0.022,0.978	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.67:0.007,0.317,0.676	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.374:0.134,0.359,0.508	0|0:0:1,0,0	1|1:1.489:0.031,0.449,0.52	0|0:0:1,0,0	1|1:1.529:0.056,0.359,0.585	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.758:0.017,0.209,0.775	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	0|1:0.963:0.263,0.511,0.226	0|1:1.133:0.166,0.535,0.299	1|1:1.58:0.031,0.357,0.612	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.308:0.139,0.413,0.447	1|1:1.381:0.091,0.436,0.472	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.79:0.002,0.205,0.792	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.51:0.044,0.403,0.553	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.457:0.075,0.393,0.532	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.155:0.178,0.49,0.332	1|1:1.484:0.106,0.305,0.589	0|0:0:1,0,0	1|1:1.624:0.044,0.287,0.668	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17577331	SNP-3.17576112.	C	A	.	PASS	AR2=0.978;DR2=0.984;AF=0.385	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.466:0.587,0.36,0.053	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.099:0.904,0.093,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.135:0.869,0.127,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.734:0.439,0.388,0.173	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.932,0.066,0.002	0|0:0.11:0.892,0.106,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.046:0.954,0.045,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.219:0.788,0.204,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.155:0.85,0.144,0.005	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.979:0,0.021,0.979	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.614:0.017,0.352,0.631	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:0.694:0.367,0.573,0.061	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.979:0,0.021,0.979	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.033:0.968,0.032,0.001	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.119:0.886,0.109,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.22:0.791,0.198,0.011	0|0:0:1,0,0	0|0:0.189:0.817,0.177,0.006	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.258:0.757,0.229,0.015	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.786:0.011,0.192,0.797	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.234:0.78,0.206,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	17578832	SNP-3.17577613.	A	G	.	PASS	AR2=0.968;DR2=0.978;AF=0.245	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1.44:0.087,0.385,0.528	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.516:0.05,0.383,0.567	1|1:2:0,0,1	1|1:1.671:0.016,0.297,0.687	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.588:0.048,0.316,0.636	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.941,0.059,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.127:0.874,0.126,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.252:0.748,0.252,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.3:0.732,0.237,0.031	0|0:0.188:0.812,0.188,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.471:0.073,0.384,0.544	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.48:0.072,0.375,0.553	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.376:0.695,0.234,0.071	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.509:0.062,0.367,0.571	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17579282	SNP-3.17578063.	C	A	.	PASS	AR2=0.986;DR2=0.989;AF=0.369	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.068:0.933,0.065,0.001	0|0:0.084:0.918,0.08,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.165:0.844,0.148,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.954,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.958,0.042,0	0|0:0.456:0.544,0.456,0	0|0:0:1,0,0	0|0:0.303:0.704,0.289,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.092:0.909,0.09,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.145:0.861,0.133,0.006	0|0:0.103:0.9,0.098,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.948,0.052,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.194:0.815,0.176,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.14:0.866,0.128,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.496:0.533,0.438,0.029	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	1|1:1.885:0,0.115,0.885	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.057:0.944,0.055,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.066:0.936,0.063,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.412:0.588,0.412,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17579520	SNP-3.17578301.	C	A	.	PASS	AR2=1;DR2=1;AF=0.346	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17580566	SNP-3.17579347.	C	A	.	PASS	AR2=1;DR2=1;AF=0.344	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.01:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17580647	SNP-3.17579428.	C	A	.	PASS	AR2=0.998;DR2=0.999;AF=0.339	GT:DS:GP	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.332:0.669,0.331,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17582407	SNP-3.17581188.	A	G	.	PASS	AR2=0.951;DR2=0.967;AF=0.278	GT:DS:GP	1|0:1.515:0.058,0.37,0.572	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.077:0.925,0.073,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.28:0.11,0.5,0.39	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.599:0.041,0.319,0.64	1|1:2:0,0,1	1|1:1.667:0.027,0.278,0.694	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.374:0.091,0.445,0.465	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.439:0.079,0.402,0.518	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.717:0.019,0.245,0.736	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.79:0.013,0.184,0.803	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.4:0.091,0.418,0.491	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.532:0.05,0.368,0.582	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.475:0.068,0.388,0.544	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.647:0.03,0.292,0.677	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.34:0.115,0.43,0.455	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.07:0.93,0.069,0	1|1:1.589:0.04,0.33,0.629	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.734:0.02,0.226,0.754	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.862:0.006,0.126,0.868	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.39:0.094,0.423,0.483	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.646:0.028,0.298,0.674	0|0:0:1,0,0	1|1:1.831:0.008,0.154,0.838
+3	17588477	SNP-3.17587258.	A	G	.	PASS	AR2=0.979;DR2=0.983;AF=0.316	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.795:0.01,0.185,0.805	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.869:0.004,0.122,0.873	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.688:0.017,0.278,0.705	1|1:1.827:0.009,0.155,0.836	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.787:0.011,0.191,0.798	1|1:1.719:0.019,0.242,0.739	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.727:0.019,0.235,0.746	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.785:0.01,0.195,0.795	0|0:0.057:0.944,0.056,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.963,0.036,0	0|1:1:0,1,0	0|0:0.038:0.962,0.038,0	1|0:1:0,1,0	1|1:1.898:0.003,0.096,0.901	0|0:0.045:0.956,0.043,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.788:0.012,0.189,0.799	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.483:0.089,0.34,0.571	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.942:0.002,0.055,0.943	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.737:0.018,0.228,0.755	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.836:0.008,0.149,0.843	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.721:0.021,0.237,0.742	1|1:1.806:0.013,0.169,0.819	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.906:0.002,0.089,0.908
+3	17589116	SNP-3.17587897.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.355	GT:DS:GP	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.669:0.367,0.597,0.036	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.923:0,0.076,0.923	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17590927	SNP-3.17589708.	C	A	.	PASS	AR2=0.978;DR2=0.983;AF=0.413	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.916:0.311,0.462,0.227	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.313:0.717,0.253,0.03	0|0:0.143:0.864,0.13,0.007	0|1:0.441:0.583,0.392,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.33:0.694,0.283,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.807:0.005,0.183,0.812	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.5:0.568,0.365,0.068	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.153:0.852,0.144,0.004	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.085:0.917,0.081,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.244:0.77,0.215,0.014	0|0:0.274:0.745,0.237,0.019	0|0:0:1,0,0	0|0:0.143:0.862,0.134,0.005	1|1:2:0,0,1	0|0:0.214:0.799,0.188,0.013	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.14:0.864,0.132,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.268:0.75,0.231,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.186:0.824,0.167,0.01	0|0:0.106:0.896,0.101,0.003	1|1:2:0,0,1	0|0:0:1,0,0
+3	17591211	SNP-3.17589992.	C	A	.	PASS	AR2=0.983;DR2=0.987;AF=0.356	GT:DS:GP	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.93:0.001,0.068,0.931	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.146:0.856,0.143,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.9:0.002,0.096,0.902	0|0:0:1,0,0	0|0:0.32:0.716,0.249,0.036	0|0:0:1,0,0	0|1:1.366:0.07,0.493,0.436	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.661:0.341,0.656,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.147:0.856,0.141,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.825:0.004,0.166,0.829	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.894:0,0.106,0.894	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.318:0.706,0.271,0.023	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.425:0,0.575,0.425	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.254:0.764,0.219,0.018	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0.246:0.77,0.213,0.017	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.187:0.822,0.169,0.009	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.132:0.875,0.118,0.007	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17591506	SNP-3.17590287cg.	C	A	.	PASS	AR2=0.984;DR2=0.986;AF=0.389	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.026:0.974,0.025,0	0|0:0.103:0.901,0.096,0.004	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0.023:0.977,0.023,0	0|0:0.034:0.966,0.034,0	0|0:0.085:0.916,0.082,0.002	0|0:0.11:0.892,0.105,0.003	0|0:0.138:0.867,0.128,0.005	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.099:0.904,0.093,0.003	0|0:0.125:0.879,0.117,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.136:0.868,0.127,0.005	0|0:0.135:0.87,0.125,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.935,0.063,0.002	0|0:0.135:0.87,0.126,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.127:0.877,0.119,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.135:0.87,0.125,0.005	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.776:0.002,0.22,0.778	1|1:2:0,0,1	0|0:0.028:0.973,0.027,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.868:0.011,0.11,0.879	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.01:0.99,0.01,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.142:0.863,0.132,0.005	0|0:0:1,0,0	0|0:0.072:0.929,0.069,0.001	0|0:0.112:0.892,0.105,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.123:0.882,0.114,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.128:0.876,0.12,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.12:0.883,0.114,0.003	0|0:0.191:0.811,0.187,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.032:0.969,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.135:0.87,0.125,0.005	0|0:0:1,0,0	0|0:0.135:0.87,0.126,0.005	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.112:0.891,0.105,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.112:0.89,0.107,0.002	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0.081:0.92,0.078,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.135:0.87,0.125,0.005	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0
+3	17591879	SNP-3.17590660.	A	G	.	PASS	AR2=1;DR2=1;AF=0.339	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17592358	SNP-3.17591139.	A	G	.	PASS	AR2=0.906;DR2=0.927;AF=0.405	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.062:0.188,0.562,0.25	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.692:0.022,0.264,0.714	1|1:1.628:0.082,0.208,0.71	1|1:1.482:0.067,0.383,0.549	1|0:1.522:0.052,0.373,0.574	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.539:0.051,0.358,0.59	1|1:2:0,0,1	1|1:1.3:0.127,0.446,0.427	1|1:2:0,0,1	0|1:1.413:0.086,0.414,0.5	1|0:1.295:0.123,0.458,0.419	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.117:0.888,0.107,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.234:0.777,0.212,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.649:0.03,0.29,0.68	0|0:0:1,0,0	1|0:1.164:0.183,0.47,0.347	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.203:0.161,0.475,0.364	0|0:0:1,0,0	1|1:1.68:0.034,0.251,0.715	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.926:0.245,0.583,0.171	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.12:0.885,0.11,0.005	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.273:0.134,0.458,0.408	1|0:1.13:0.16,0.55,0.29	1|1:1.329:0.111,0.449,0.44	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.13:0.209,0.451,0.34	0|0:0:1,0,0	1|1:1.503:0.041,0.416,0.543	0|0:0:1,0,0	1|1:1.199:0.155,0.491,0.354	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.114:0.2,0.485,0.314	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.68:0.025,0.271,0.704	0|0:0.81:0.309,0.572,0.119	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.278:0.133,0.455,0.412	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.117:0.888,0.107,0.005	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.839:0.015,0.13,0.855	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.335:0.111,0.443,0.446	0|0:0:1,0,0	1|1:1.481:0.065,0.389,0.546	1|1:2:0,0,1	1|0:1.398:0.089,0.423,0.488	0|1:1.18:0.132,0.555,0.312	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.989:0.199,0.612,0.189	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.394:0.093,0.42,0.487	0|0:0:1,0,0	1|0:0.817:0.322,0.538,0.14	1|0:1.184:0.167,0.483,0.35	1|0:1.164:0.175,0.487,0.338	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.149:0.857,0.136,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.349:0.114,0.422,0.464	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.382:0.092,0.435,0.474	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.817:0.012,0.159,0.829	1|1:1.82:0.012,0.157,0.831	1|1:1.637:0.026,0.311,0.663	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.57:0.051,0.327,0.621	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.965:0.001,0.033,0.966	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.328:0.114,0.445,0.442	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17593386	SNP-3.17592167.	A	G	.	PASS	AR2=1;DR2=1;AF=0.233	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.971:0.029,0.971,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17593464	SNP-3.17592245.	C	A	.	PASS	AR2=0.998;DR2=0.999;AF=0.343	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.534:0,0.466,0.534	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17594845	SNP-3.17593626.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.339	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.028,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.98:0,0.02,0.98	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.152:0.859,0.129,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17595808	SNP-3.17594589.	C	A	.	PASS	AR2=0.944;DR2=0.96;AF=0.427	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.026:0.248,0.478,0.274	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:0.567:0.5,0.433,0.067	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.186:0.822,0.169,0.009	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.334:0.697,0.272,0.031	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:0.826:0.329,0.516,0.155	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.517:0.551,0.381,0.068	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.521:0.548,0.383,0.069	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.166:0.838,0.157,0.004	0|0:0:1,0,0	0|0:0.615:0.483,0.418,0.099	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.521:0.548,0.383,0.069	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.52:0.548,0.383,0.069	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.379:0.046,0.53,0.425	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.081:0.92,0.08,0.001	1|1:2:0,0,1	0|0:0.618:0.496,0.39,0.114	1|0:0.811:0.353,0.484,0.164	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:0.694:0.4,0.507,0.093	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.257:0.751,0.24,0.008	0|0:0.713:0.409,0.47,0.121	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.838:0.339,0.484,0.177	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.067:0.934,0.064,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.662:0.457,0.423,0.119	0|0:0:1,0,0	0|0:0.69:0.432,0.447,0.121	0|1:1:0,1,0	1|0:1:0,1,0	1|0:0.71:0.415,0.459,0.126	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.552:0.524,0.399,0.077	0|0:0:1,0,0	0|0:0.105:0.899,0.098,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.04:0.961,0.039,0.001	1|0:0.577:0.448,0.527,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17596615	SNP-3.17595396.	C	A	.	PASS	AR2=0.961;DR2=0.969;AF=0.387	GT:DS:GP	0|0:0.023:0.977,0.023,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.905:0.001,0.093,0.906	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.615:0.006,0.373,0.621	0|0:0:1,0,0	0|0:0.031:0.969,0.031,0	0|0:0:1,0,0	0|0:0.378:0.655,0.312,0.033	1|1:1.948:0,0.052,0.948	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.228:0.775,0.221,0.003	0|0:0.307:0.714,0.264,0.022	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.383:0.645,0.327,0.028	0|0:0.467:0.59,0.354,0.057	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.283:0.737,0.243,0.02	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.962,0.037,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.947,0.053,0	0|0:0:1,0,0	0|0:0.028:0.972,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.969,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.293:0.73,0.246,0.023	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.971:0,0.028,0.972	1|0:1:0,1,0	1|1:1.916:0.002,0.08,0.918	1|1:1.849:0.001,0.15,0.849	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.849:0,0.151,0.849	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.901:0.003,0.094,0.903	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.334:0.692,0.281,0.027	1|1:2:0,0,1	1|1:1.882:0.006,0.105,0.888	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.11:0.893,0.103,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.809:0.009,0.172,0.818	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.907:0.004,0.085,0.911	1|1:1.965:0.001,0.033,0.966	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.871:0.004,0.121,0.875	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.032:0.968,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.969,0.031,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.9:0.006,0.088,0.906	1|1:1.966:0,0.034,0.966	1|1:1.964:0.001,0.035,0.965	0|1:1:0,1,0	0|0:0.4:0.64,0.319,0.041	0|0:0.032:0.968,0.032,0	0|0:0.338:0.693,0.277,0.03	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.294:0.736,0.235,0.029	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.093:0.91,0.087,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.271:0.745,0.239,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.032,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.379:0.656,0.309,0.035	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.034:0.967,0.033,0	0|0:0:1,0,0	0|0:0.027:0.974,0.026,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.955:0.001,0.043,0.956	1|1:1.877:0.003,0.117,0.88	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.322:0.703,0.272,0.025	0|0:0:1,0,0	0|0:0.251:0.754,0.24,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.201:0.807,0.184,0.009	0|0:0:1,0,0	1|1:1.936:0.005,0.054,0.941	0|0:0.03:0.971,0.029,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.969,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0.223:0.792,0.192,0.015	0|0:0.061:0.941,0.057,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.965:0,0.034,0.966	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.926:0.002,0.07,0.928	0|0:0:1,0,0
+3	17598380	SNP-3.17597161.	A	G	.	PASS	AR2=1;DR2=1;AF=0.331	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17598768	SNP-3.17597549.	C	A	.	PASS	AR2=0.978;DR2=0.984;AF=0.388	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.284:0.738,0.239,0.022	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.354:0.681,0.283,0.035	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.311:0.712,0.264,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.328:0.693,0.286,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.341:0.689,0.281,0.03	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0.415:0.629,0.326,0.045	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.168:0.84,0.152,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.424:0.623,0.33,0.047	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.415:0.629,0.326,0.045	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.092:0.908,0.091,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0,0.032,0.968	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.937:0.001,0.061,0.938	1|1:1.933:0.001,0.065,0.934	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.938:0.001,0.06,0.939	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.931:0.001,0.068,0.931	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.891:0,0.108,0.891	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.317:0.708,0.267,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.915:0.002,0.082,0.916	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.162:0.847,0.144,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.219:0.791,0.199,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.938:0.001,0.06,0.939	0|0:0:1,0,0
+3	17599074	SNP-3.17597855.	A	G	.	PASS	AR2=0.915;DR2=0.939;AF=0.513	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1.414:0.086,0.414,0.5	0|0:0:1,0,0	0|1:1.328:0.112,0.447,0.441	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.398:0.091,0.421,0.488	1|0:1:0,1,0	1|0:1.289:0.124,0.463,0.413	1|0:1.351:0.105,0.439,0.456	0|1:1.365:0.1,0.435,0.465	0|1:1.331:0.112,0.445,0.443	1|1:1.324:0.115,0.446,0.439	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.734:0.004,0.259,0.737	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.562:0.022,0.394,0.584	1|1:2:0,0,1	1|1:1.134:0.188,0.49,0.322	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.831:0.279,0.61,0.11	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.031:0.238,0.492,0.269	0|0:0:1,0,0	1|0:1.078:0.212,0.498,0.29	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.023:0.243,0.491,0.266	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.934:0.001,0.064,0.935	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.33:0.113,0.444,0.443	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1.373:0.101,0.425,0.474	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.29:0.128,0.453,0.418	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.317:0.117,0.448,0.434	0|1:1.239:0.143,0.474,0.382	1|0:1.36:0.102,0.436,0.462	1|1:1.331:0.112,0.444,0.444	1|1:2:0,0,1	1|1:1.309:0.118,0.456,0.426	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.339:0.11,0.441,0.449	0|1:1:0,1,0	0|1:1.287:0.126,0.462,0.413	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.205:0.171,0.453,0.376	0|1:1:0,1,0	1|1:1.877:0.004,0.115,0.881	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.391:0.093,0.423,0.484	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.439:0.08,0.4,0.52	0|1:1.442:0.08,0.398,0.522	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17600387	SNP-3.17599168.	A	G	.	PASS	AR2=1;DR2=1;AF=0.245	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.027:0.007,0.96,0.033	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17602120	SNP-3.17600901.	A	G	.	PASS	AR2=1;DR2=1;AF=0.251	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.969,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	17602951	SNP-3.17601732.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.225	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.903:0.003,0.092,0.905	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.916:0.002,0.08,0.918	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17603083	SNP-3.17601864.	C	A	.	PASS	AR2=1;DR2=1;AF=0.368	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17605753	SNP-3.17604534.	A	G	.	PASS	AR2=1;DR2=1;AF=0.237	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17606218	SNP-3.17604999.	C	A	.	PASS	AR2=1;DR2=1;AF=0.344	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17606459	SNP-3.17605240.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.329	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.832:0,0.168,0.832	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17607362	SNP-3.17606143.	C	A	.	PASS	AR2=1;DR2=1;AF=0.368	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17607398	SNP-3.17606179.	C	A	.	PASS	AR2=1;DR2=1;AF=0.344	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17607425	SNP-3.17606206.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.361	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.786:0.013,0.188,0.799	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17610485	SNP-3.17609266.	C	A	.	PASS	AR2=1;DR2=1;AF=0.366	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.934:0.001,0.063,0.936	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17610961	SNP-3.17609742.	C	A	.	PASS	AR2=0.987;DR2=0.991;AF=0.325	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.849:0.007,0.138,0.855	1|1:1.462:0.096,0.346,0.558	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.976:0,0.024,0.976	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:1.499:0.06,0.381,0.559	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.753:0.03,0.188,0.782	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.71:0.051,0.187,0.761	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.628:0.041,0.289,0.67	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17611345	SNP-3.17610126.	A	G	.	PASS	AR2=0.997;DR2=0.997;AF=0.348	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0.019:0.981,0.019,0	0|0:0.093:0.91,0.088,0.002	0|0:0.03:0.97,0.03,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0.1:0.902,0.095,0.003	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0.043:0.958,0.04,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0.053:0.947,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.924,0.075,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.953,0.047,0.001	1|0:1:0,1,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.088:0.914,0.084,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.948,0.051,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17613346	SNP-3.17612127.	C	A	.	PASS	AR2=1;DR2=1;AF=0.362	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17614049	SNP-3.17612830.	C	A	.	PASS	AR2=0.982;DR2=0.986;AF=0.401	GT:DS:GP	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.712:0.026,0.235,0.738	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.489:0.582,0.346,0.072	0|0:0:1,0,0	0|0:0.09:0.913,0.085,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.337:0.686,0.29,0.023	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.307:0.717,0.259,0.024	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.075:0.927,0.07,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.105:0.899,0.098,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.304:0.72,0.256,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.844:0.011,0.134,0.855	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.866:0.003,0.127,0.87	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.844:0.005,0.145,0.85	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.875:0.004,0.118,0.879	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.185:0.825,0.164,0.01	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.1:0.903,0.094,0.003	0|0:0:1,0,0	0|0:0.159:0.847,0.147,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.866:0.005,0.124,0.871	1|1:1.902:0.002,0.094,0.904	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.229:0.783,0.206,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17615482	SNP-3.17614263.	A	G	.	PASS	AR2=0.982;DR2=0.985;AF=0.257	GT:DS:GP	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.145:0.862,0.131,0.007	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	1|1:2:0,0,1	0|0:0.049:0.951,0.049,0	1|1:1.716:0.014,0.257,0.73	0|0:0.056:0.946,0.053,0.001	0|1:1:0,1,0	1|1:1.805:0.007,0.181,0.812	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.15:0.852,0.145,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.126:0.877,0.119,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.923,0.075,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.949:0.056,0.939,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.108:0.053,0.786,0.161	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.119:0.886,0.109,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.941:0.001,0.058,0.942	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.852:0.007,0.134,0.859	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.889:0.003,0.104,0.892	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.806:0.011,0.173,0.817	1|1:1.68:0.023,0.275,0.702	1|0:1:0,1,0	1|1:1.722:0.016,0.246,0.738	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.898:0.003,0.096,0.901	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.937,0.061,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.864:0.004,0.128,0.868	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17616753	SNP-3.17615534.	A	G	.	PASS	AR2=1;DR2=1;AF=0.333	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.978:0,0.022,0.978	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.974:0,0.025,0.975	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17621240	SNP-3.17620021.	A	G	.	PASS	AR2=0.938;DR2=0.941;AF=0.226	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.424:0.118,0.339,0.542	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.938:0.279,0.504,0.217	1|1:2:0,0,1	1|0:1.094:0.205,0.496,0.299	1|1:1.119:0.196,0.49,0.314	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.122:0.192,0.493,0.314	1|0:0.996:0.257,0.489,0.253	1|1:2:0,0,1	0|1:1.118:0.194,0.494,0.312	1|0:1.087:0.177,0.559,0.264	1|1:2:0,0,1	0|1:1.073:0.216,0.495,0.289	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.142:0.183,0.492,0.325	0|1:1.105:0.204,0.487,0.309	1|0:1.126:0.191,0.492,0.317	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.124:0.192,0.492,0.316	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.077:0.213,0.498,0.289	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.141:0.185,0.489,0.326	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.057:0.223,0.497,0.28	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.152:0.182,0.484,0.334	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.053:0.225,0.496,0.279	1|1:1.094:0.206,0.494,0.3	1|1:2:0,0,1	0|0:0.176:0.825,0.174,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.136:0.188,0.488,0.324	0|0:0:1,0,0	1|1:2:0,0,1
+3	17621876	SNP-3.17620657.	C	A	.	PASS	AR2=0.982;DR2=0.984;AF=0.41	GT:DS:GP	0|0:0.131:0.873,0.122,0.005	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.105:0.898,0.098,0.004	0|0:0.121:0.883,0.114,0.004	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.232:0.778,0.212,0.01	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.12:0.882,0.115,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.148:0.858,0.135,0.006	0|0:0:1,0,0	0|0:0.136:0.869,0.127,0.004	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0.133:0.871,0.125,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.141:0.864,0.131,0.005	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.116:0.887,0.109,0.004	0|0:0.131:0.873,0.122,0.004	0|0:0:1,0,0	0|0:0.177:0.835,0.153,0.012	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.025:0.975,0.024,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.027:0.973,0.026,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.137:0.868,0.128,0.005	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.404:0.692,0.213,0.095	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.181:0.827,0.165,0.008	0|0:0.152:0.856,0.136,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.15:0.856,0.139,0.006	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0.138:0.867,0.128,0.005	0|0:0.138:0.867,0.128,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.106:0.896,0.103,0.002	0|0:0:1,0,0	0|0:0.128:0.876,0.12,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.036:0.964,0.035,0.001	0|0:0.142:0.863,0.132,0.005	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.108:0.895,0.102,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.122:0.882,0.114,0.004	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.056:0.945,0.055,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17621997	SNP-3.17620778.	C	A	.	PASS	AR2=0.926;DR2=0.94;AF=0.242	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.163:0.854,0.13,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.383:0.638,0.342,0.02	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.711:0.396,0.497,0.107	1|0:1.008:0.245,0.502,0.253	0|0:0.229:0.782,0.206,0.011	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.14:0.875,0.11,0.015	0|0:0.448:0.596,0.361,0.044	0|0:0:1,0,0	0|0:0.384:0.641,0.334,0.025	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.361:0.672,0.294,0.034	0|0:0.438:0.611,0.34,0.049	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.838:0.338,0.486,0.176	0|1:0.821:0.348,0.483,0.169	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.876:0.314,0.496,0.19	1|0:0.962:0.212,0.614,0.174	1|1:2:0,0,1	0|1:0.764:0.383,0.471,0.147	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.07:0.931,0.067,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.171:0.83,0.17,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.12:0.883,0.114,0.003	1|1:0.84:0.337,0.486,0.177	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.878:0.315,0.492,0.193	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.718:0.413,0.456,0.131	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.569:0.478,0.476,0.047	0|0:0.466:0.59,0.354,0.056	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.46:0.584,0.373,0.043	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.343:0.686,0.284,0.029	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.503:0.559,0.378,0.062	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.799:0.361,0.479,0.16	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.779:0.04,0.14,0.819	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.223:0.794,0.188,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.838:0.338,0.486,0.176	0|1:1.06:0.209,0.523,0.268	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	17623026	SNP-3.17621807.	C	A	.	PASS	AR2=0.965;DR2=0.974;AF=0.46	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.864:0.001,0.134,0.865	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.599:0.479,0.443,0.078	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.883:0,0.116,0.883	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.241:0.781,0.196,0.022	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.157:0.849,0.145,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.24:0.774,0.211,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1.019:0.031,0.92,0.049	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.119:0.882,0.116,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.756:0.015,0.215,0.77	1|1:2:0,0,1	1|1:1.897:0.006,0.09,0.903	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.906:0.007,0.081,0.913	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.869:0.01,0.11,0.88	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.972:0,0.027,0.972	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.715:0.017,0.252,0.732	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.615:0.007,0.372,0.622	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.546:0.531,0.392,0.077	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.986:0,0.013,0.986	0|0:0:1,0,0	0|0:0.193:0.83,0.146,0.023	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.154:0.853,0.14,0.007	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.174:0.839,0.148,0.013	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.944:0.001,0.054,0.945	0|0:0.158:0.847,0.147,0.006	0|0:0:1,0,0	0|0:0.151:0.855,0.14,0.006	0|0:0.143:0.862,0.133,0.005	1|1:2:0,0,1	0|0:0.171:0.836,0.157,0.007	0|0:0.53:0.535,0.401,0.065	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.876:0.004,0.115,0.88	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.392:0.611,0.386,0.003	0|0:0.601:0.47,0.459,0.071	0|0:0:1,0,0	0|0:0.164:0.839,0.159,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.923,0.074,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.192:0.818,0.173,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.203:0.807,0.182,0.01	1|0:1:0,1,0	0|0:0:1,0,0
+3	17623785	SNP-3.17622566.	C	A	.	PASS	AR2=0.954;DR2=0.966;AF=0.397	GT:DS:GP	0|0:0.107:0.895,0.102,0.003	1|1:1.672:0.055,0.218,0.727	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.113:0.898,0.091,0.011	0|0:0.512:0.543,0.402,0.055	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.438:0.603,0.357,0.04	0|0:0.266:0.765,0.204,0.031	0|0:0.609:0.481,0.43,0.089	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.274:0.739,0.247,0.014	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.163:0.847,0.143,0.01	0|0:0:1,0,0	0|0:0.071:0.931,0.067,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.285:0.753,0.208,0.039	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.101:0.901,0.097,0.002	0|0:0.112:0.891,0.105,0.003	0|0:0.064:0.936,0.063,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.127:0.875,0.123,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.42:0.593,0.394,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.648:0.459,0.434,0.107	1|1:1.913:0.002,0.083,0.915	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.842:0.007,0.144,0.849	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.099:0.903,0.095,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.056:0.165,0.614,0.221	1|0:1.491:0.053,0.404,0.543	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.961:0.001,0.037,0.962	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.192:0.82,0.169,0.012	1|1:2:0,0,1	0|0:0.17:0.837,0.156,0.007	0|0:0.097:0.905,0.094,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.481:0.575,0.369,0.056	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.118:0.888,0.106,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.475:0.572,0.381,0.047	0|0:0.282:0.738,0.242,0.02	0|0:0.24:0.77,0.22,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.105:0.897,0.102,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.153:0.853,0.141,0.006	0|0:0.123:0.881,0.114,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.483:0.568,0.38,0.052	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.11:0.894,0.102,0.004	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.031:0.969,0.031,0	0|0:0.12:0.882,0.116,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.424:0.61,0.355,0.035	0|0:0:1,0,0	0|0:0.111:0.89,0.109,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.113:0.89,0.107,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.107:0.895,0.102,0.002	1|1:2:0,0,1	0|0:0:1,0,0
+3	17625611	SNP-3.17624392.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.245	GT:DS:GP	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.957:0,0.042,0.957	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.962:0,0.037,0.962	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.03:0.971,0.029,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.944:0.001,0.054,0.945	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17626123	SNP-3.17624904.	C	A	.	PASS	AR2=0.979;DR2=0.985;AF=0.288	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.957:0.001,0.042,0.958	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.024:0.976,0.024,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.945:0,0.055,0.945	1|1:2:0,0,1	0|0:0.219:0.782,0.218,0	1|1:1.867:0.005,0.122,0.872	0|0:0.171:0.838,0.153,0.009	0|0:0:1,0,0	1|1:1.702:0.021,0.255,0.724	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	1|1:1.455:0.059,0.427,0.514	1|1:1.975:0,0.025,0.975	1|1:1.948:0,0.052,0.948	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.314:0.106,0.474,0.42	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.634:0.403,0.56,0.037	1|1:1.481:0.062,0.395,0.543	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.694:0.01,0.287,0.704	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.686:0.022,0.27,0.708	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.976:0,0.024,0.976	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.746:0.017,0.219,0.763	0|0:0:1,0,0
+3	17627375	SNP-3.17626156.	C	A	.	PASS	AR2=0.965;DR2=0.975;AF=0.301	GT:DS:GP	0|0:0:1,0,0	0|0:0.232:0.8,0.168,0.032	0|0:0.286:0.743,0.229,0.029	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.827:0.005,0.162,0.833	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:1.682:0.032,0.253,0.714	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.926:0.001,0.073,0.926	0|0:0:1,0,0	1|1:1.845:0.007,0.142,0.851	0|0:0.265:0.763,0.208,0.029	0|0:0.161:0.84,0.16,0	1|1:1.682:0.023,0.271,0.705	0|0:0:1,0,0	1|0:1.137:0.258,0.348,0.395	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.961:0,0.039,0.961	1|1:1.986:0,0.014,0.986	1|1:1.998:0,0.002,0.998	1|1:1.462:0.062,0.414,0.524	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.297:0.114,0.474,0.412	0|0:0:1,0,0	1|1:1.876:0.004,0.116,0.88	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.452:0.076,0.396,0.528	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.822:0.012,0.154,0.834	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.826:0.007,0.16,0.833	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.914:0.309,0.469,0.222	1|1:1.609:0.031,0.33,0.64	1|1:1.926:0.001,0.073,0.926	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:1.922:0.002,0.075,0.924	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.933:0.001,0.064,0.934	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.854:0.006,0.134,0.86	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17634856	SNP-3.17633637.	A	G	.	PASS	AR2=0.996;DR2=0.997;AF=0.249	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.115:0.888,0.108,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.116:0.887,0.109,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.958,0.041,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.675:0.361,0.604,0.036	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17634974	SNP-3.17633755.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.36	GT:DS:GP	0|0:0.011:0.989,0.011,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.021,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.111:0.889,0.111,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.929,0.07,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.049:0.951,0.049,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17635011	SNP-3.17633792.	A	G	.	PASS	AR2=0.958;DR2=0.971;AF=0.361	GT:DS:GP	1|1:1.956:0.001,0.042,0.957	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.97:0,0.029,0.971	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.852:0.001,0.145,0.853	0|0:0.444:0.603,0.35,0.047	0|0:0.36:0.668,0.303,0.029	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.929:0.001,0.068,0.931	0|0:0:1,0,0	0|0:0.351:0.672,0.306,0.023	1|0:0.475:0.549,0.428,0.023	0|0:0:1,0,0	0|0:0.249:0.754,0.243,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.201:0.809,0.18,0.01	0|0:0:1,0,0	0|0:0.232:0.782,0.205,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.56:0.525,0.389,0.085	0|0:0:1,0,0	1|1:1.942:0.001,0.056,0.943	1|1:1.941:0.001,0.057,0.942	1|1:1.947:0.001,0.052,0.947	1|1:1.924:0.001,0.073,0.926	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:1.964:0.001,0.033,0.965	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.949:0.001,0.05,0.949	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.964:0,0.036,0.964	1|1:1.965:0,0.034,0.966	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.805:0.005,0.185,0.81	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.81:0.004,0.181,0.815	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.974:0,0.026,0.974	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.925:0.001,0.072,0.927	1|1:1.925:0.002,0.072,0.926	1|1:1.942:0.001,0.056,0.943	1|1:1.947:0.001,0.052,0.947	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.64:0.465,0.429,0.105	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.518:0.555,0.372,0.073	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:0.618:0.468,0.445,0.087	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0.598:0.499,0.403,0.098	0|0:0:1,0,0	0|0:0.247:0.767,0.22,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.303:0.71,0.277,0.013	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.947:0.001,0.052,0.947	1|1:1.963:0,0.036,0.964	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.443:0.603,0.352,0.045	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.975:0,0.025,0.975	1|1:2:0,0,1	1|1:1.941:0.001,0.057,0.942	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.926:0.001,0.071,0.927	1|1:1.945:0.001,0.054,0.946	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.152:0.849,0.15,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.959:0.001,0.04,0.96	1|1:1.948:0.001,0.05,0.949	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17636302	SNP-3.17635083.	C	A	.	PASS	AR2=0.997;DR2=0.997;AF=0.356	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.933:0.001,0.065,0.934	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.932:0.001,0.066,0.933	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.974:0,0.025,0.975	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.04:0.961,0.039,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.936,0.064,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.93:0.001,0.068,0.931	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.04:0.96,0.04,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.88:0,0.12,0.88	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.088:0.912,0.088,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17639132	SNP-3.17637913.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.233	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.927:0.002,0.069,0.929	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.93:0.001,0.068,0.931	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17639226	SNP-3.17638007.	C	A	.	PASS	AR2=0.986;DR2=0.989;AF=0.42	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.036:0.965,0.035,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0.35:0.678,0.295,0.028	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.345:0.684,0.286,0.03	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.288:0.731,0.25,0.019	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.057:0.944,0.055,0.001	0|0:0:1,0,0	0|0:0.045:0.956,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.26:0.761,0.218,0.021	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.194:0.817,0.171,0.011	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.243:0.767,0.223,0.01	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.154:0.853,0.141,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.206:0.806,0.182,0.012	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.091:0.909,0.09,0.001	0|0:0.316:0.705,0.274,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.963,0.036,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.193:0.813,0.181,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17642147	SNP-3.17640928.	C	A	.	PASS	AR2=1;DR2=1;AF=0.356	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.934:0,0.065,0.934	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	17643112	SNP-3.17641893.	C	A	.	PASS	AR2=0.973;DR2=0.978;AF=0.429	GT:DS:GP	0|0:0.353:0.668,0.31,0.021	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.342:0.688,0.283,0.029	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.247:0.765,0.224,0.011	0|0:0.296:0.727,0.25,0.023	0|0:0.352:0.679,0.29,0.031	0|0:0.292:0.729,0.251,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.325:0.702,0.271,0.027	0|0:0.307:0.715,0.262,0.023	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.095:0.907,0.091,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.181:0.825,0.17,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.131:0.874,0.121,0.005	0|0:0.157:0.849,0.144,0.007	0|0:0.133:0.87,0.127,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.163:0.844,0.149,0.007	0|0:0.074:0.927,0.072,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.126:0.876,0.123,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.052:0.948,0.052,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.15:0.854,0.142,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.236:0.779,0.205,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.174:0.832,0.161,0.007	0|1:1:0,1,0	0|0:0.228:0.786,0.199,0.015	0|0:0.212:0.801,0.186,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.257:0.76,0.223,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.126:0.879,0.115,0.005	0|0:0.062:0.939,0.06,0.001	0|0:0.126:0.879,0.115,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.943,0.055,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.947,0.051,0.002	0|0:0:1,0,0	0|0:0.038:0.963,0.037,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.306:0.716,0.261,0.023	1|1:2:0,0,1	0|0:0:1,0,0
+3	17643875	SNP-3.17642656.	C	A	.	PASS	AR2=0.997;DR2=0.997;AF=0.388	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.112:0.891,0.106,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.977,0.023,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.092:0.91,0.088,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.931,0.068,0.001	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.112:0.892,0.104,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.942,0.057,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.064:0.938,0.061,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.094:0.908,0.089,0.002	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17644445	SNP-3.17643226.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.332	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.936:0.001,0.062,0.937	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.92:0.002,0.076,0.922	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.952:0.001,0.047,0.952	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.917:0.002,0.079,0.919	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.961:0.001,0.038,0.961	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.027,0.973	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.939:0.001,0.06,0.94	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17644856	SNP-3.17643637.	C	A	.	PASS	AR2=0.971;DR2=0.976;AF=0.427	GT:DS:GP	0|0:0.301:0.72,0.26,0.02	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.149:0.856,0.139,0.005	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.156:0.849,0.146,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.119:0.885,0.111,0.004	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.136:0.868,0.127,0.005	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.202:0.805,0.187,0.007	0|0:0:1,0,0	0|0:0.238:0.773,0.215,0.011	0|0:0.07:0.931,0.067,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.17:0.838,0.154,0.008	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.158:0.849,0.143,0.008	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.247:0.766,0.221,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.188:0.823,0.165,0.012	0|0:0:1,0,0	0|0:0.139:0.868,0.125,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.289:0.733,0.244,0.022	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.213:0.798,0.19,0.012	1|1:1.922:0.001,0.076,0.923	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.177:0.833,0.158,0.01	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.279:0.738,0.245,0.017	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.162:0.845,0.147,0.007	1|1:2:0,0,1	0|0:0.223:0.79,0.196,0.014	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.132:0.873,0.123,0.005	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.323:0.703,0.272,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.113:0.889,0.108,0.002	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.13:0.874,0.122,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.154:0.851,0.143,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.231:0.781,0.206,0.013	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.124:0.88,0.115,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.294:0.728,0.25,0.022	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.055:0.946,0.054,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.086:0.918,0.078,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.274:0.746,0.234,0.02	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.139:0.866,0.128,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.137:0.868,0.126,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.028:0.973,0.027,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.916:0.002,0.08,0.918	0|0:0:1,0,0
+3	17647013	SNP-3.17645794.	C	A	.	PASS	AR2=0.963;DR2=0.971;AF=0.371	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.721:0.021,0.236,0.742	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.924:0.287,0.501,0.211	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:0.925:0.287,0.502,0.212	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.318:0.098,0.486,0.416	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.802:0.366,0.467,0.168	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.689:0.024,0.262,0.714	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.484:0.059,0.398,0.543	1|1:2:0,0,1	1|1:1.692:0.024,0.261,0.715	1|1:1.735:0.018,0.23,0.753	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.635:0.472,0.421,0.107	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.673:0.034,0.259,0.707	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.922:0.301,0.475,0.224	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:0.828:0.332,0.509,0.16	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.624:0.482,0.412,0.106	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.701:0.027,0.244,0.729	1|1:2:0,0,1	0|0:0.922:0.289,0.501,0.21	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.97:0.001,0.029,0.97	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.081:0.92,0.079,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17650140	SNP-3.17648921.	C	A	.	PASS	AR2=0.967;DR2=0.973;AF=0.338	GT:DS:GP	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	1|1:1.761:0.012,0.215,0.773	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.564:0.038,0.359,0.602	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.141:0.048,0.762,0.19	0|0:0.042:0.958,0.041,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.796:0.001,0.202,0.797	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.089:0.912,0.087,0.001	0|0:0:1,0,0	1|1:1.981:0,0.018,0.981	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.213:0.788,0.212,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.891:0.004,0.101,0.895	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.962:0,0.038,0.962	1|1:1.951:0,0.049,0.951	1|0:1.23:0.083,0.604,0.313	1|1:2:0,0,1	1|1:1.577:0.027,0.37,0.604	1|0:1.039:0.127,0.708,0.165	1|1:2:0,0,1	1|0:1.198:0.102,0.597,0.3	1|0:1.379:0.037,0.547,0.416	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:1.779:0.006,0.21,0.784	0|1:1.352:0.036,0.576,0.388	1|1:1.92:0.001,0.077,0.921	1|1:2:0,0,1	1|0:0.912:0.102,0.884,0.014	1|1:1.819:0.004,0.173,0.823	0|0:0:1,0,0	1|1:1.981:0,0.019,0.981	0|0:0:1,0,0	1|1:1.681:0.022,0.275,0.703	0|0:0:1,0,0	1|1:1.895:0.003,0.099,0.898	1|0:0.874:0.126,0.874,0	1|1:2:0,0,1	1|1:1.743:0.016,0.225,0.759	1|1:1.887:0.002,0.108,0.89	0|1:1.754:0.007,0.231,0.761	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.833:0.011,0.144,0.844	0|0:0:1,0,0	1|1:1.834:0,0.166,0.834	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.952:0,0.048,0.952	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.74:0.018,0.225,0.757	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.964:0.001,0.034,0.965	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.076:0.926,0.072,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.963,0.037,0	0|0:0.041:0.959,0.041,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.956:0,0.043,0.956	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.032,0	0|0:0:1,0,0	0|0:0.038:0.963,0.037,0	0|0:0.054:0.947,0.052,0.001	0|0:0.021:0.979,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.825:0.002,0.17,0.828	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.006:0.994,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17662282	SNP-3.17661063.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.349	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.388:0.612,0.388,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.91:0.005,0.08,0.915	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.084:0.916,0.084,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17664128	SNP-3.17662909.	A	G	.	PASS	AR2=0.942;DR2=0.958;AF=0.445	GT:DS:GP	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1.347:0.11,0.434,0.457	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1.216:0.138,0.509,0.353	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.343:0.098,0.46,0.442	1|1:1.62:0.01,0.361,0.629	0|0:0:1,0,0	0|1:1.159:0.175,0.491,0.334	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.644:0.029,0.297,0.673	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.286:0.122,0.469,0.409	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.532:0.055,0.358,0.587	1|1:1.471:0.056,0.418,0.526	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.31:0.103,0.485,0.412	0|0:0:1,0,0	1|1:1.942:0.002,0.054,0.944	0|0:0:1,0,0	1|1:1.839:0.007,0.147,0.846	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.116:0.202,0.48,0.318	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1.366:0.101,0.432,0.467	1|0:1:0,1,0	0|1:1.59:0.043,0.324,0.633	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.468:0.07,0.392,0.538	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.775:0.018,0.189,0.793	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.323:0.109,0.46,0.432	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	1|1:1.577:0.024,0.375,0.601	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1.198:0.169,0.464,0.367	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.353:0.109,0.429,0.462	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.77:0.017,0.195,0.788	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.727:0.022,0.229,0.749	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17667100	SNP-3.17665881.	C	A	.	PASS	AR2=0.992;DR2=0.993;AF=0.358	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.105:0.898,0.099,0.003	0|1:0.839:0.166,0.829,0.005	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.075:0.926,0.072,0.001	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.092:0.911,0.087,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.173:0.833,0.162,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.735:0.007,0.251,0.742	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.936:0,0.063,0.936	1|0:1:0,1,0	1|1:1.664:0.001,0.333,0.665	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.155:0.849,0.147,0.004	0|0:0.114:0.889,0.108,0.003	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.023,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.926,0.073,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.962,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	17667874	SNP-3.17666655.	C	A	.	PASS	AR2=0.975;DR2=0.98;AF=0.306	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.637:0.032,0.299,0.669	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.604:0.001,0.394,0.605	1|0:1.187:0.172,0.468,0.36	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.161:0.106,0.627,0.267	1|1:1.832:0.012,0.143,0.845	1|1:1.457:0.034,0.476,0.49	1|0:1:0,1,0	1|1:1.91:0.003,0.084,0.913	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.967:0,0.033,0.967	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:1.737:0.01,0.243,0.747	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.912:0,0.087,0.913	0|0:0:1,0,0	0|1:1.189:0.065,0.681,0.254	0|0:0:1,0,0	1|1:1.82:0.007,0.166,0.827	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.705:0.014,0.267,0.719	0|0:0:1,0,0	1|1:1.898:0.003,0.097,0.9	1|1:1.718:0.027,0.228,0.745	0|0:0:1,0,0	1|1:1.875:0,0.125,0.875	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.97:0,0.029,0.971	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.838:0.007,0.149,0.845	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.956:0.238,0.568,0.194	0|0:0:1,0,0
+3	17670005	SNP-3.17668786.	A	G	.	PASS	AR2=1;DR2=1;AF=0.228	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17671978	SNP-3.17670759.	A	G	.	PASS	AR2=1;DR2=1;AF=0.329	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.925:0.002,0.071,0.927	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17672027	SNP-3.17670808.	A	G	.	PASS	AR2=0.998;DR2=0.999;AF=0.415	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.497:0.512,0.48,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.936,0.064,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17675851	SNP-3.17674632.	A	G	.	PASS	AR2=0.887;DR2=0.913;AF=0.248	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.139:0.868,0.125,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.758:0.38,0.483,0.138	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.316:0.689,0.305,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.347:0.677,0.299,0.024	1|1:2:0,0,1	0|0:0.659:0.445,0.451,0.104	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.711:0.407,0.475,0.118	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.745:0.399,0.457,0.144	1|1:2:0,0,1	1|0:0.876:0.32,0.483,0.196	1|1:2:0,0,1	0|0:0.717:0.407,0.469,0.124	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.115:0.195,0.495,0.31	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.549:0.527,0.396,0.077	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.12:0.19,0.499,0.311	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.611:0.48,0.43,0.09	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.093:0.215,0.478,0.308	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.255:0.76,0.224,0.015	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0.334:0.689,0.288,0.023	0|0:0:1,0,0	0|0:0.238:0.775,0.212,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.787:0.369,0.474,0.157	0|0:0:1,0,0	0|0:0.096:0.905,0.094,0.001	0|0:0:1,0,0	0|0:0.12:0.88,0.119,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.334:0.697,0.271,0.031	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.024:0.228,0.52,0.252	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.479:0.581,0.359,0.06	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.128:0.878,0.116,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.641:0.488,0.383,0.129	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.468:0.592,0.349,0.059	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.848:0.333,0.485,0.182	0|0:0.953:0.267,0.512,0.22	0|0:0:1,0,0	0|0:0.582:0.514,0.391,0.096	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.541:0.532,0.394,0.074	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.873:0.316,0.495,0.189	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.128:0.878,0.116,0.006	0|0:0.292:0.722,0.263,0.015	1|0:0.712:0.422,0.445,0.133	0|0:0.37:0.654,0.322,0.024	0|0:0.37:0.651,0.328,0.021	0|0:0:1,0,0	0|0:0.17:0.842,0.147,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.128:0.878,0.116,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.579:0.504,0.413,0.083	0|0:0.377:0.683,0.258,0.059	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.683:0.436,0.444,0.12	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.528:0.533,0.407,0.06	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.258:0.754,0.234,0.012	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.484:0.581,0.354,0.065
+3	17676214	SNP-3.17674995.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.317	GT:DS:GP	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.82:0.197,0.786,0.017	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17676653	SNP-3.17675434.	A	G	.	PASS	AR2=0.968;DR2=0.975;AF=0.34	GT:DS:GP	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.662:0.028,0.282,0.69	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.692:0.024,0.26,0.716	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.682:0.027,0.265,0.709	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.705:0.022,0.252,0.726	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.716:0.022,0.239,0.738	1|1:1.691:0.025,0.26,0.715	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.57:0.031,0.369,0.601	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.712:0.021,0.247,0.732	1|1:1.691:0.024,0.262,0.715	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.743:0.016,0.224,0.759	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.678:0.027,0.267,0.705	1|1:1.687:0.024,0.266,0.71	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.839:0.008,0.144,0.848	0|1:1:0,1,0	1|1:1.704:0.021,0.253,0.725	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.712:0.02,0.247,0.732	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.792:0.012,0.185,0.804	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.741:0.018,0.223,0.759	1|1:2:0,0,1	1|1:1.753:0.017,0.214,0.769	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.636:0.034,0.297,0.669	1|1:1.647:0.032,0.29,0.679	1|1:1.746:0.017,0.22,0.763	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17678550	SNP-3.17677331.	A	G	.	PASS	AR2=0.997;DR2=0.998;AF=0.353	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.954,0.046,0	0|0:0.064:0.937,0.062,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.945,0.054,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.088:0.914,0.084,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.952,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.957,0.043,0.001	0|0:0.036:0.964,0.036,0	1|1:2:0,0,1	0|0:0.084:0.918,0.079,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.035:0.965,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.971,0.029,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17678991	SNP-3.17677772.	C	A	.	PASS	AR2=1;DR2=1;AF=0.37	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17683160	SNP-3.17681941.	A	G	.	PASS	AR2=1;DR2=1;AF=0.337	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17683326	SNP-3.17682107.	A	G	.	PASS	AR2=1;DR2=1;AF=0.344	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17687960	SNP-3.17686741.	A	G	.	PASS	AR2=0.921;DR2=0.941;AF=0.487	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.704:0.022,0.252,0.726	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.705:0.025,0.244,0.731	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.762:0.015,0.208,0.777	0|0:0:1,0,0	1|1:1.604:0.036,0.323,0.64	1|1:1.743:0.003,0.25,0.747	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.665:0.026,0.283,0.691	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.308:0.122,0.448,0.43	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.412:0.09,0.409,0.502	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.764:0.008,0.219,0.773	1|1:1.328:0.124,0.425,0.451	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1.242:0.141,0.476,0.383	1|1:2:0,0,1	0|1:1.219:0.152,0.476,0.371	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.28:0.13,0.459,0.411	1|1:2:0,0,1	0|1:1.233:0.132,0.502,0.366	1|1:2:0,0,1	0|1:1.162:0.174,0.491,0.335	0|0:0:1,0,0	1|0:1.228:0.146,0.479,0.374	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.196:0.161,0.483,0.357	1|1:2:0,0,1	1|1:1.719:0.025,0.232,0.743	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.507:0.064,0.366,0.57	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.597:0.405,0.593,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.237:0.145,0.473,0.382	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.512:0.059,0.369,0.572	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.628:0.031,0.31,0.659	0|0:0:1,0,0	1|1:1.217:0.153,0.477,0.37	1|1:1.475:0.041,0.442,0.517	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.486:0.057,0.399,0.543	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.66:0.026,0.287,0.687	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.738:0.017,0.227,0.756	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.436:0.038,0.487,0.475	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.843:0.006,0.144,0.849	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.431:0.073,0.423,0.504	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.848:0.014,0.124,0.862	1|1:2:0,0,1	1|1:1.574:0.029,0.368,0.603	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.583:0.034,0.35,0.616	0|0:0:1,0,0	1|1:1.693:0.027,0.253,0.72	1|1:1.843:0.007,0.142,0.85	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.32:0.131,0.418,0.451	1|1:1.778:0.019,0.184,0.797	1|1:1.602:0.035,0.329,0.637	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.773:0.014,0.199,0.787	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17688883	SNP-3.17687664.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.232	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.062:0.938,0.062,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.942,0.058,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17689826	SNP-3.17688607.	C	A	.	PASS	AR2=0.973;DR2=0.979;AF=0.409	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.063:0.938,0.06,0.001	1|1:1.858:0.008,0.126,0.866	0|0:0.089:0.913,0.085,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.952,0.047,0.001	1|1:1.859:0.008,0.126,0.867	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.408:0.033,0.526,0.441	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.124:0.88,0.116,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.598:0.498,0.405,0.097	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.128:0.877,0.119,0.004	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.132:0.872,0.123,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.082:0.92,0.078,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.133:0.872,0.124,0.005	1|1:1.913:0.006,0.076,0.919	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.557:0.531,0.381,0.088	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.182:0.826,0.166,0.008	0|0:0:1,0,0	0|0:0.058:0.944,0.055,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.426:0.621,0.332,0.047	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.096:0.907,0.091,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.045:0.956,0.043,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.116:0.887,0.109,0.004	0|0:0.131:0.872,0.124,0.004	0|0:0.054:0.947,0.052,0.001	0|0:0.041:0.959,0.04,0.001	0|0:0.141:0.864,0.131,0.005	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.114:0.889,0.107,0.004	0|0:0:1,0,0	0|0:0.107:0.895,0.102,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.922,0.076,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:0.416:0.628,0.328,0.044	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.844:0.009,0.138,0.853	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.844:0.009,0.138,0.853	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.932,0.067,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.142:0.864,0.131,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.197:0.812,0.178,0.009	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17691873	SNP-3.17690654.	C	A	.	PASS	AR2=0.94;DR2=0.954;AF=0.408	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.29:0.729,0.252,0.019	0|0:0.201:0.809,0.18,0.011	0|0:0.347:0.687,0.279,0.034	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.732:0.367,0.533,0.099	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.234:0.78,0.205,0.015	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.319:0.706,0.269,0.025	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.504:0.536,0.424,0.04	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.162:0.845,0.148,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0.21:0.799,0.191,0.009	0|0:0.149:0.857,0.137,0.006	0|0:0:1,0,0	0|0:0.245:0.77,0.214,0.016	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.174:0.834,0.158,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.717:0.022,0.24,0.739	0|0:0:1,0,0	0|0:0.165:0.842,0.151,0.007	1|1:1.682:0.026,0.265,0.709	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.183:0.825,0.167,0.008	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.734:0.007,0.253,0.741	1|1:1.589:0.042,0.326,0.631	1|1:1.895:0.002,0.102,0.897	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.497:0.075,0.354,0.571	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.75:0.016,0.218,0.766	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.269:0.749,0.233,0.018	0|0:0.178:0.828,0.166,0.006	0|0:0:1,0,0	0|1:0.329:0.693,0.285,0.022	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.197:0.812,0.178,0.01	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.662:0.403,0.533,0.064	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.857:0.338,0.467,0.195	0|0:0.322:0.699,0.28,0.021	0|0:0:1,0,0	1|1:1.949:0.002,0.047,0.951	1|1:2:0,0,1	0|0:0.34:0.692,0.276,0.032	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.57:0.5,0.431,0.069	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.42:0.632,0.316,0.052	0|1:1:0,1,0	0|0:0.319:0.705,0.271,0.024	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.781:0.018,0.183,0.799	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.237:0.777,0.208,0.014	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.696:0.033,0.239,0.728	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.162:0.847,0.145,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.291:0.729,0.251,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.196:0.815,0.174,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.951:0.002,0.045,0.953	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.97:0,0.03,0.97	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.774:0.316,0.594,0.09	0|0:0:1,0,0	0|0:0.154:0.85,0.146,0.004	0|0:0:1,0,0	0|0:0.238:0.774,0.213,0.012	1|1:1.831:0.01,0.148,0.842	0|0:0:1,0,0
+3	17692504	SNP-3.17691285.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.32	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.905:0.096,0.904,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.636:0.011,0.342,0.647	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17695096	SNP-3.17693877.	A	G	.	PASS	AR2=0.924;DR2=0.944;AF=0.38	GT:DS:GP	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.796:0.359,0.486,0.155	1|1:2:0,0,1	0|0:0.344:0.696,0.264,0.04	1|1:2:0,0,1	0|1:1.313:0.113,0.462,0.426	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.467:0.568,0.398,0.034	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.82:0.347,0.486,0.167	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.665:0.458,0.419,0.123	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.726:0.406,0.461,0.132	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.183:0.827,0.162,0.011	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.127:0.878,0.118,0.005	0|0:0.2:0.819,0.162,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.247:0.761,0.231,0.008	1|0:1:0,1,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.462:0.037,0.463,0.499	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.165:0.839,0.156,0.005	0|0:0:1,0,0	0|0:0.143:0.86,0.138,0.003	0|1:0.849:0.181,0.789,0.03	0|0:0.391:0.634,0.342,0.025	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.12:0.881,0.119,0.001	0|0:0.23:0.801,0.168,0.031	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.065:0.936,0.064,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.726:0.406,0.461,0.132	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1.03:0.248,0.475,0.278	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.589:0.017,0.377,0.606	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.707:0.435,0.423,0.142	0|1:1.163:0.18,0.478,0.342	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.11:0.159,0.571,0.27	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.513:0.014,0.458,0.528	0|1:1.445:0.053,0.449,0.498	0|1:1:0,1,0	1|1:1.494:0.042,0.422,0.536	0|0:0:1,0,0	1|1:1.632:0.019,0.33,0.651	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.31:0.101,0.487,0.411	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.293:0.121,0.466,0.414	1|0:0.975:0.241,0.543,0.216	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.587:0.48,0.453,0.067	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.63:0.471,0.427,0.101	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.093:0.217,0.473,0.31	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.405:0.645,0.306,0.05	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.033,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	17697028	SNP-3.17695809.	C	A	.	PASS	AR2=0.997;DR2=0.998;AF=0.334	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.986:0,0.014,0.986	1|0:1:0,1,0	1|1:1.839:0.003,0.155,0.842	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|0:0.986:0.025,0.963,0.012	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.016:0.984,0.016,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.731:0.002,0.265,0.733	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17697157	SNP-3.17695938.	C	A	.	PASS	AR2=1;DR2=1;AF=0.331	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.029:0.013,0.944,0.043	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17697224	SNP-3.17696005.	A	G	.	PASS	AR2=0.992;DR2=0.994;AF=0.304	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.659:0.033,0.275,0.692	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.677:0.028,0.266,0.706	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.807:0.009,0.175,0.816	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.761:0.016,0.207,0.777	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.937:0.001,0.061,0.938	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.89:0.002,0.105,0.892	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.768:0.013,0.206,0.781	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17697781	SNP-3.17696562.	A	G	.	PASS	AR2=0.991;DR2=0.992;AF=0.327	GT:DS:GP	1|1:1.945:0,0.055,0.945	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.225:0.775,0.225,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.943:0.001,0.055,0.944	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.9:0.003,0.095,0.903	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.951:0.001,0.047,0.952	1|1:1.935:0.001,0.063,0.936	1|1:2:0,0,1	1|1:1.954:0.001,0.044,0.955	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.882:0.004,0.11,0.886	1|1:1.919:0.002,0.078,0.92	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.943:0.001,0.055,0.944	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.925:0.003,0.069,0.928	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.932:0.002,0.065,0.934	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.879:0.004,0.113,0.883	1|0:1:0,1,0	1|1:1.926:0.002,0.071,0.928	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.952:0.001,0.046,0.953	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.856:0.006,0.133,0.862	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.918:0.002,0.078,0.92	1|1:1.943:0.001,0.056,0.943	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.239:0.038,0.685,0.277	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17697883	SNP-3.17696664.	C	A	.	PASS	AR2=1;DR2=1;AF=0.344	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.072:0.928,0.072,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17698451	SNP-3.17697232.	C	A	.	PASS	AR2=1;DR2=1;AF=0.374	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17698502	SNP-3.17697283.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.357	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.06:0.941,0.058,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.965,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.024,0	0|0:0:1,0,0	0|0:0.025:0.975,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.933,0.066,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.928,0.07,0.001	0|0:0.054:0.947,0.052,0.001	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.958,0.041,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.04:0,0.96,0.04	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.044:0.956,0.043,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.961,0.039,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17698841	SNP-3.17697622.	C	A	.	PASS	AR2=0.986;DR2=0.987;AF=0.388	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.964:0,0.035,0.964	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.957,0.042,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.942,0.057,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.089:0.913,0.085,0.002	0|0:0.07:0.931,0.067,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.041:0.23,0.498,0.272	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.922,0.075,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.379:0.638,0.346,0.016	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.89:0,0.109,0.891	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.074:0.927,0.072,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.041:0.23,0.498,0.272	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.056:0.944,0.056,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.033,0	0|0:0.447:0.611,0.33,0.059	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.956,0.043,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.041:0.23,0.498,0.272	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17698925	SNP-3.17697706.	C	A	.	PASS	AR2=0.99;DR2=0.993;AF=0.337	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.669:0.022,0.286,0.692	1|1:1.92:0,0.08,0.92	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.77:0.009,0.211,0.78	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.961:0.001,0.037,0.962	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.587:0.041,0.332,0.628	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.612:0.034,0.32,0.646	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.662:0.339,0.659,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.893:0.004,0.099,0.897	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	17699075	SNP-3.17697856.	C	A	.	PASS	AR2=1;DR2=1;AF=0.372	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17700323	SNP-3.17699104.	C	A	.	PASS	AR2=1;DR2=1;AF=0.343	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17700524	SNP-3.17699305.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.367	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.841:0.003,0.153,0.844	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.863:0.138,0.862,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17702270	SNP-3.17701051.	C	A	.	PASS	AR2=0.982;DR2=0.984;AF=0.316	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.808:0.011,0.171,0.818	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.776:0.016,0.192,0.792	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.715:0.019,0.247,0.734	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.937:0.001,0.062,0.938	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.799:0.01,0.181,0.809	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.714:0.026,0.235,0.74	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.701:0.025,0.25,0.726	1|1:1.865:0.001,0.132,0.866	0|0:0:1,0,0	1|1:1.776:0.012,0.2,0.788	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.041:0.959,0.041,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.773:0.01,0.206,0.783	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.909:0.001,0.089,0.91	1|1:1.749:0.019,0.213,0.768	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.781:0.016,0.187,0.797	1|1:1.992:0,0.008,0.992	1|1:1.931:0.001,0.067,0.932	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.947:0.001,0.05,0.948	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:1.847:0.006,0.142,0.853	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.724:0.019,0.239,0.742	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.759:0.019,0.204,0.778	1|1:2:0,0,1	0|0:0.073:0.932,0.064,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.864:0.01,0.117,0.874	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17702415	SNP-3.17701196.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.38	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.051,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.016:0.985,0.015,0	0|0:0.111:0.901,0.088,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0
+3	17710758	SNP-3.17709539.	A	G	.	PASS	AR2=0.906;DR2=0.928;AF=0.262	GT:DS:GP	1|1:1.557:0.046,0.35,0.604	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.648:0.033,0.287,0.68	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.322:0.116,0.446,0.438	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.108:0.177,0.538,0.285	1|1:1.572:0.037,0.353,0.61	0|0:0.975:0.286,0.453,0.261	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.452:0.084,0.379,0.536	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.39:0.093,0.424,0.483	1|1:2:0,0,1	1|1:1.113:0.237,0.413,0.35	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.297:0.125,0.453,0.422	0|1:1.084:0.246,0.423,0.331	0|1:0.823:0.318,0.542,0.14	1|1:2:0,0,1	1|1:1.421:0.079,0.42,0.5	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.03:0.235,0.499,0.265	0|0:0.105:0.908,0.079,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.419:0.132,0.316,0.552	1|0:0.986:0.253,0.508,0.239	1|1:1.471:0.061,0.406,0.533	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.819:0.181,0.819,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.402:0.611,0.376,0.013	0|0:0:1,0,0	1|1:1.556:0.001,0.443,0.557	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.467:0.083,0.368,0.549	1|0:1.177:0.17,0.483,0.347	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.632:0.035,0.298,0.667	0|0:0:1,0,0	1|1:1.608:0.04,0.313,0.647	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.305:0.106,0.483,0.411	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.622:0.036,0.305,0.658	0|0:0:1,0,0	1|1:1.46:0.07,0.4,0.53	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.644:0.034,0.289,0.677	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.49:0.515,0.48,0.005	1|1:2:0,0,1	1|1:1.504:0.058,0.38,0.562	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.35:0.109,0.433,0.459	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.585:0.047,0.321,0.632	1|1:2:0,0,1	1|1:1.696:0.029,0.247,0.725	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.679:0.029,0.264,0.707	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	17710982	SNP-3.17709763.	C	A	.	PASS	AR2=0.997;DR2=0.998;AF=0.382	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.056:0.945,0.054,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.013,0.987	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.473:0.536,0.454,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17713163	SNP-3.17711944.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.334	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.863:0.001,0.135,0.864	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17714585	SNP-3.17713366.	C	A	.	PASS	AR2=1;DR2=1;AF=0.346	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17714710	SNP-3.17713491.	C	A	.	PASS	AR2=1;DR2=1;AF=0.381	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17716008	SNP-3.17714789.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.333	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.291:0,0.709,0.291	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.975:0,0.024,0.975	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.971:0,0.029,0.971	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.971:0,0.029,0.971	1|1:2:0,0,1	1|1:1.977:0,0.022,0.977	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17717694	SNP-3.17716475.	C	A	.	PASS	AR2=1;DR2=1;AF=0.344	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17717750	SNP-3.17716531.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.389	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.978:0,0.021,0.978	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.042:0.958,0.041,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.065:0.935,0.064,0	0|0:0:1,0,0	0|0:0.041:0.959,0.041,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.311:0.69,0.309,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.456:0.553,0.437,0.009	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17718986	SNP-3.17717767.	C	A	.	PASS	AR2=1;DR2=1;AF=0.35	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17721273	SNP-3.17720054.	C	A	.	PASS	AR2=1;DR2=1;AF=0.374	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17721786	SNP-3.17720567.	C	A	.	PASS	AR2=1;DR2=1;AF=0.344	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17723480	SNP-3.17722261.	C	A	.	PASS	AR2=0.984;DR2=0.986;AF=0.403	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.076:0.926,0.073,0.002	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.087:0.915,0.083,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.052:0.243,0.462,0.295	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.072:0.929,0.07,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.946,0.051,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.074:0.927,0.071,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.93,0.069,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.046:0.954,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.205:0.804,0.187,0.009	0|1:1:0,1,0	0|0:0.138:0.867,0.127,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.132:0.87,0.129,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.088:0.914,0.084,0.002	1|0:1:0,1,0	0|0:0.292:0.728,0.252,0.02	0|1:1:0,1,0	0|0:0.286:0.729,0.256,0.015	0|0:0.135:0.873,0.119,0.008	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.089:0.913,0.085,0.002	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.074:0.927,0.071,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.243:0.773,0.212,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.148:0.858,0.136,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.926,0.073,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.746:0.317,0.621,0.063	0|0:0:1,0,0	0|0:0.081:0.92,0.078,0.002	1|1:2:0,0,1	0|0:0:1,0,0
+3	17723948	SNP-3.17722729.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.347	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.012,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.017:0.984,0.016,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17725427	SNP-3.17724208.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.393	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.12:0,0.88,0.12	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.752:0.044,0.16,0.796	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17725668	SNP-3.17724449.	C	A	.	PASS	AR2=1;DR2=1;AF=0.346	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.948,0.052,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17729295	SNP-3.17728076.	C	A	.	PASS	AR2=0.985;DR2=0.988;AF=0.298	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.956:0.001,0.041,0.958	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.738:0.018,0.226,0.756	1|0:1:0,1,0	1|0:0.83:0.172,0.827,0.002	1|1:1.681:0.028,0.262,0.709	1|1:1.727:0.016,0.242,0.742	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.908:0.003,0.086,0.911	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.779:0.008,0.204,0.788	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.652:0.033,0.282,0.685	1|1:1.7:0.022,0.256,0.722	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.698:0.024,0.254,0.722	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.879:0.005,0.11,0.885	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.814:0.008,0.169,0.822	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17729801	SNP-3.17728582.	C	A	.	PASS	AR2=1;DR2=1;AF=0.336	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.918:0.001,0.079,0.919	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17737118	SNP-3.17735899.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.34	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:1.737:0,0.263,0.737	1|1:2:0,0,1	1|1:1.843:0,0.157,0.843	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.96:0,0.039,0.96	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17737696	SNP-3.17736477.	C	A	.	PASS	AR2=0.945;DR2=0.957;AF=0.304	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.242:0.101,0.555,0.344	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.146:0.1,0.653,0.246	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.082:0.921,0.077,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.959,0.041,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.962,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.054:0.947,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.051,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	0|0:0.06:0.941,0.057,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.779:0.014,0.193,0.793	1|1:2:0,0,1	1|1:1.67:0.025,0.28,0.695	1|1:1.968:0,0.031,0.968	1|1:2:0,0,1	1|1:1.932:0.001,0.067,0.932	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.917:0,0.083,0.917	1|0:0.751:0.289,0.672,0.04	1|1:1.779:0.015,0.191,0.794	1|1:1.515:0.048,0.39,0.562	1|0:1.302:0.133,0.433,0.434	1|1:2:0,0,1	1|0:0.83:0.225,0.72,0.055	1|1:1.565:0.024,0.388,0.589	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:1.581:0.034,0.351,0.615	0|1:1.548:0.045,0.362,0.593	1|1:1.837:0.006,0.151,0.843	1|1:1.927:0,0.072,0.928	0|0:0:1,0,0	1|1:1.801:0.009,0.182,0.809	1|1:1.797:0.004,0.195,0.801	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.041:0.172,0.614,0.213	0|0:0.009:0.991,0.009,0	1|0:1.147:0.082,0.688,0.23	0|0:0:1,0,0	1|1:1.595:0.023,0.359,0.618	1|1:1.623:0.039,0.298,0.662	1|1:2:0,0,1	1|1:1.396:0.079,0.447,0.474	0|0:0:1,0,0	1|1:1.72:0.015,0.249,0.735	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.961:0.001,0.036,0.962	1|1:2:0,0,1	1|1:1.736:0.014,0.237,0.75	1|1:1.755:0.028,0.188,0.783	1|1:1.794:0.004,0.197,0.798	0|0:0:1,0,0	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.715:0.032,0.22,0.747	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.173:0.058,0.71,0.232	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.957,0.042,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.061:0.939,0.061,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.884:0.004,0.108,0.888	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.852:0.014,0.12,0.866	1|1:2:0,0,1	1|1:1.942:0.001,0.056,0.943	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.963,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.951:0.002,0.046,0.952	1|1:1.591:0.023,0.362,0.615	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.955:0,0.045,0.955	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:1.943:0,0.057,0.943	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.952,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17739317	SNP-3.17738098.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.364	GT:DS:GP	0|0:0.027:0.973,0.026,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.914:0.099,0.888,0.013	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.114:0.892,0.103,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17740471	SNP-3.17739252.	C	A	.	PASS	AR2=0.988;DR2=0.99;AF=0.4	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.099:0.904,0.094,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:0.663:0.356,0.625,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.153:0.856,0.135,0.009	0|0:0.079:0.923,0.076,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.942,0.055,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.046:0.954,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.956,0.044,0.001	0|0:0.058:0.943,0.056,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.083:0.919,0.079,0.002	0|0:0.035:0.966,0.034,0	0|0:0:1,0,0	0|0:0.072:0.929,0.069,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.087:0.915,0.083,0.002	0|0:0.065:0.936,0.063,0.001	0|0:0.083:0.919,0.079,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.951,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.089:0.913,0.085,0.002	0|0:0:1,0,0	0|0:0.09:0.912,0.087,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.083:0.92,0.078,0.002	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.115:0.886,0.114,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.938,0.061,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.179:0.829,0.164,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.116:0.887,0.11,0.003	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.089:0.913,0.085,0.002	0|0:0:1,0,0	0|0:0.118:0.885,0.112,0.003	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.925,0.073,0.001	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.131:0.872,0.125,0.003	0|0:0.025:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.968:0.032,0.967,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17741343	SNP-3.17740124.	A	G	.	PASS	AR2=0.986;DR2=0.988;AF=0.25	GT:DS:GP	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.967:0,0.033,0.967	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.961:0,0.038,0.961	0|0:0:1,0,0	1|1:1.925:0.002,0.071,0.927	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.309:0.742,0.207,0.051	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:1.035:0.283,0.4,0.318	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.742:0.03,0.199,0.771	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.742:0.03,0.199,0.771	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.74:0.03,0.2,0.77	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.761:0.024,0.19,0.785	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17743311	SNP-3.17742092ga.	A	G	.	PASS	AR2=0.966;DR2=0.973;AF=0.23	GT:DS:GP	0|0:0.547:0.503,0.447,0.05	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.087:0.915,0.082,0.002	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.683:0.026,0.264,0.71	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.632:0.037,0.295,0.669	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.702:0.021,0.256,0.723	1|1:1.834:0,0.166,0.834	0|0:0.095:0.911,0.083,0.006	1|1:1.607:0.042,0.31,0.648	0|1:1:0,1,0	1|1:1.656:0.03,0.284,0.686	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.732:0.016,0.237,0.748	0|1:1:0,1,0	1|1:1.768:0.01,0.211,0.779	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.09:0.912,0.085,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.125:0.879,0.117,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.068:0.934,0.064,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.078:0.923,0.075,0.002	0|0:0:1,0,0	0|0:0.074:0.927,0.071,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.964,0.034,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0.02:0.98,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.08:0.922,0.076,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.83:0.002,0.166,0.832	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.929:0.003,0.066,0.932	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.72:0.025,0.231,0.744	1|1:2:0,0,1	0|1:1.763:0.014,0.21,0.776	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.909:0.107,0.876,0.016	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0.095:0.905,0.095,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.95:0,0.05,0.95	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.797:0.008,0.187,0.805	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.082:0.92,0.078,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0
+3	17743358	SNP-3.17742139.	A	G	.	PASS	AR2=0.788;DR2=0.822;AF=0.425	GT:DS:GP	1|1:1.432:0.077,0.414,0.509	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.274:0.131,0.464,0.405	1|1:1.167:0.18,0.474,0.346	1|0:1.222:0.152,0.475,0.373	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.299:0.156,0.39,0.455	0|1:1.274:0.132,0.462,0.406	1|1:2:0,0,1	0|0:1.219:0.153,0.476,0.371	0|1:1.239:0.146,0.469,0.385	0|0:0:1,0,0	1|1:1.225:0.151,0.474,0.375	0|1:1.229:0.154,0.463,0.383	1|1:2:0,0,1	1|0:1.222:0.152,0.475,0.373	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.277:0.129,0.465,0.406	0|0:0:1,0,0	1|1:1.221:0.152,0.475,0.373	1|0:1.226:0.15,0.475,0.376	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.276:0.129,0.466,0.405	0|0:0:1,0,0	1|1:1.216:0.154,0.476,0.37	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.224:0.151,0.475,0.375	1|1:1.098:0.198,0.506,0.296	1|1:1.346:0.115,0.423,0.461	0|1:1.149:0.153,0.545,0.302	0|1:1.247:0.142,0.469,0.389	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.442:0.068,0.423,0.509	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.175:0.164,0.498,0.338	0|0:0:1,0,0	1|1:1.219:0.153,0.474,0.372	1|0:1.573:0.044,0.339,0.617	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.34:0.112,0.437,0.452	1|1:1.32:0.118,0.444,0.438	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.253:0.139,0.468,0.393	1|0:1.228:0.15,0.473,0.378	1|0:1.249:0.14,0.47,0.389	1|0:1.276:0.131,0.461,0.407	1|0:1.318:0.119,0.444,0.437	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.242:0.144,0.471,0.385	0|0:0.362:0.725,0.187,0.088	1|1:1.243:0.142,0.472,0.385	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.233:0.148,0.472,0.38	0|1:1.279:0.13,0.461,0.409	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.159:0.841,0.159,0	0|0:0:1,0,0	1|1:1.864:0.002,0.132,0.866	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.036:0.964,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.302:0.124,0.45,0.426	1|1:1.698:0.057,0.188,0.755	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.386:0.101,0.412,0.487	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1	1|0:1.248:0.141,0.47,0.389	0|1:1.316:0.119,0.447,0.435	1|0:1.306:0.123,0.448,0.429	1|1:2:0,0,1	1|0:0.98:0.263,0.495,0.242	0|0:0:1,0,0	1|1:1.237:0.15,0.464,0.386	0|0:0.992:0.293,0.422,0.285	0|0:0.956:0.29,0.464,0.246	1|0:1.309:0.12,0.451,0.429	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.774:0.007,0.212,0.781	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.425:0.087,0.401,0.512	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.222:0.152,0.475,0.373	0|1:1.24:0.148,0.464,0.388	1|1:2:0,0,1	1|1:1.238:0.145,0.472,0.383	1|1:1.247:0.143,0.468,0.389	1|1:2:0,0,1	0|1:1.373:0.1,0.428,0.472	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.26:0.137,0.467,0.396	0|1:1.293:0.124,0.459,0.417	0|1:1.17:0.161,0.507,0.331	1|1:2:0,0,1	1|1:1.213:0.155,0.477,0.368	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.1:0.196,0.508,0.296	1|1:1.26:0.14,0.461,0.4	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.694:0.006,0.294,0.7	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.225:0.153,0.469,0.378	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.222:0.154,0.471,0.375	0|0:0:1,0,0	1|1:1.268:0.137,0.457,0.406	0|1:1.295:0.119,0.466,0.415	1|0:1.275:0.132,0.461,0.407	0|1:0.833:0.34,0.487,0.173	0|1:1.269:0.137,0.457,0.406	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.3:0.125,0.451,0.425	1|0:1.162:0.184,0.47,0.346	1|0:1.136:0.195,0.475,0.331	1|0:1.239:0.137,0.487,0.376	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.165:0.183,0.468,0.349	0|1:1.159:0.186,0.469,0.345	1|0:1.267:0.122,0.489,0.389	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.176:0.176,0.472,0.352	1|1:2:0,0,1	1|1:1.149:0.232,0.388,0.381	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.408:0.092,0.408,0.5	0|0:0:1,0,0	1|0:1.265:0.134,0.466,0.4	0|1:1.162:0.184,0.47,0.346	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.288:0.128,0.456,0.416
+3	17744426	SNP-3.17743207.	A	G	.	PASS	AR2=0.878;DR2=0.907;AF=0.207	GT:DS:GP	0|0:0.548:0.522,0.408,0.07	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.268:0.75,0.231,0.018	0|0:0:1,0,0	0|0:0.34:0.689,0.282,0.029	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.336:0.692,0.28,0.028	0|0:0.305:0.718,0.258,0.023	0|0:0.062:0.94,0.057,0.002	0|0:0.335:0.693,0.279,0.028	0|1:0.517:0.541,0.402,0.057	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.906,0.091,0.003	0|0:0.279:0.74,0.24,0.02	0|0:0:1,0,0	1|0:0.684:0.436,0.445,0.12	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.252:0.763,0.221,0.015	1|1:2:0,0,1	0|0:0.3:0.722,0.256,0.022	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.335:0.693,0.279,0.028	0|0:0.34:0.689,0.282,0.029	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.646:0.439,0.476,0.085	0|0:0.385:0.657,0.302,0.042	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.623:0.48,0.418,0.102	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.837:0.361,0.442,0.197	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.779:0.375,0.472,0.154	0|0:0:1,0,0	0|0:0.493:0.572,0.363,0.065	0|0:0:1,0,0	1|1:0.997:0.255,0.492,0.253	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.485:0.587,0.341,0.072	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.318:0.701,0.279,0.02	0|1:0.91:0.222,0.646,0.132	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.312:0.705,0.278,0.017	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0.086:0.916,0.081,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.278:0.741,0.24,0.019	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.421:0.06,0.458,0.481	0|0:0:1,0,0	0|0:0.445:0.614,0.326,0.06	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.332:0.696,0.277,0.028	0|0:0:1,0,0	0|0:0.38:0.662,0.296,0.042	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.255:0.763,0.22,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.446:0.649,0.255,0.096	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.325:0.702,0.272,0.027	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.322:0.704,0.271,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.331:0.697,0.275,0.028	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.033:0.967,0.032,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.859:0.323,0.495,0.182	0|0:0:1,0,0	0|0:0.316:0.709,0.266,0.025	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.782:0.373,0.473,0.155	0|0:0.231:0.787,0.195,0.018	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.763:0.385,0.468,0.147	0|0:0.219:0.796,0.188,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.218:0.798,0.187,0.015	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.382:0.653,0.311,0.036	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.302:0.722,0.254,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17746158	SNP-3.17744939.	C	A	.	PASS	AR2=0.986;DR2=0.987;AF=0.28	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.9:0.235,0.629,0.135	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.081:0.927,0.064,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.881:0.004,0.111,0.885	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.03:0.232,0.505,0.263	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.843:0,0.156,0.844	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.888:0.002,0.108,0.89	1|1:1.854:0.003,0.14,0.857	0|0:0:1,0,0	1|1:1.967:0.001,0.032,0.968	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:0.944:0.25,0.557,0.194	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.894:0.002,0.102,0.896	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.918:0.001,0.079,0.92	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0,0.031,0.968	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.876:0.003,0.118,0.879	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.979:0,0.02,0.98	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.977:0,0.022,0.977	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.723:0.017,0.243,0.74	0|0:0:1,0,0
+3	17749213	SNP-3.17747994.	C	A	.	PASS	AR2=1;DR2=1;AF=0.344	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.97:0,0.03,0.97	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.027,0.972	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.971:0.03,0.969,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17749696	SNP-3.17748477.	A	G	.	PASS	AR2=1;DR2=1;AF=0.257	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17749998	SNP-3.17748779.	A	G	.	PASS	AR2=0.939;DR2=0.952;AF=0.527	GT:DS:GP	1|1:1.897:0.002,0.099,0.899	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.537:0.067,0.33,0.603	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.606:0.046,0.302,0.652	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.735:0.037,0.19,0.772	1|1:1.94:0.004,0.052,0.944	0|0:0:1,0,0	1|1:1.829:0.01,0.151,0.839	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.73:0.014,0.243,0.743	1|1:2:0,0,1	0|1:1.505:0.072,0.351,0.577	1|1:2:0,0,1	1|1:1.723:0.014,0.249,0.737	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.514:0.039,0.408,0.553	0|1:1.525:0.069,0.337,0.594	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.028:0.23,0.513,0.257	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.08:0.208,0.504,0.288	0|0:0.924:0.316,0.445,0.239	1|1:1.844:0.004,0.148,0.848	1|1:1.711:0.017,0.255,0.728	1|1:2:0,0,1	1|1:1.939:0.002,0.057,0.941	0|0:0.519:0.517,0.447,0.036	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.653:0.017,0.313,0.67	1|1:1.923:0.002,0.074,0.925	1|1:1.667:0.02,0.294,0.687	0|0:0.426:0.633,0.308,0.059	1|0:1.322:0.099,0.48,0.421	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.437:0.101,0.362,0.537	1|1:1.88:0.005,0.109,0.886	1|1:2:0,0,1	1|1:1.914:0.001,0.084,0.915	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.896:0.004,0.096,0.9	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.711:0.402,0.484,0.114	1|1:1.684:0.009,0.298,0.693	1|0:0.972:0.211,0.606,0.183	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.9:0.004,0.093,0.903	1|1:2:0,0,1	1|1:1.975:0,0.025,0.975	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.528:0.041,0.389,0.569	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.645:0.036,0.284,0.681	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.637:0.031,0.301,0.668	1|1:1.64:0.033,0.294,0.673	1|1:1.685:0.027,0.26,0.713	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.908:0.002,0.088,0.91	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.568:0.054,0.324,0.622	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.18:0.203,0.414,0.383	1|1:1.795:0.013,0.179,0.808	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.779:0.005,0.211,0.784	1|1:1.925:0.002,0.07,0.928	1|1:1.944:0.004,0.049,0.948	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.866:0.005,0.124,0.871	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.907:0.002,0.09,0.908	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.97:0,0.03,0.97	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17750962	SNP-3.17749743.	A	G	.	PASS	AR2=0.998;DR2=0.999;AF=0.398	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0.042:0.958,0.041,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.472:0.532,0.463,0.004	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	17752329	SNP-3.17751110.	C	A	.	PASS	AR2=0.983;DR2=0.989;AF=0.412	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.496:0.567,0.37,0.063	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.626:0.47,0.433,0.096	1|0:1:0,1,0	0|0:0.507:0.558,0.378,0.065	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.952,0.047,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.406:0.635,0.324,0.041	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.456:0.596,0.352,0.052	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.009:0.257,0.477,0.266	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17752493	SNP-3.17751274.	C	A	.	PASS	AR2=0.959;DR2=0.97;AF=0.425	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.264:0.755,0.226,0.019	0|1:0.619:0.469,0.442,0.089	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.446:0.594,0.366,0.04	1|0:0.448:0.585,0.382,0.033	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.099:0.903,0.094,0.003	0|0:0:1,0,0	0|0:0.196:0.813,0.177,0.01	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.133:0.873,0.122,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.137:0.867,0.13,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.093:0.909,0.089,0.002	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.141:0.864,0.131,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.109:0.897,0.098,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.08:0.922,0.076,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.302:0.728,0.241,0.03	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.218:0.794,0.194,0.012	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.217:0.794,0.195,0.011	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.432:0.589,0.389,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.302:0.728,0.241,0.03	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.1:0.903,0.094,0.003	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.173:0.836,0.155,0.009	1|0:1:0,1,0	0|0:0.463:0.583,0.37,0.046	0|0:0.495:0.546,0.413,0.041	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.525:0.554,0.368,0.079	0|0:0.118:0.885,0.111,0.004	0|0:0.119:0.885,0.111,0.004	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.104:0.899,0.099,0.003	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.562:0.479,0.481,0.041	0|0:0.108:0.895,0.102,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.099:0.903,0.094,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.282:0.737,0.244,0.019	0|0:0.255:0.762,0.222,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.211:0.803,0.184,0.013	0|0:0.191:0.818,0.172,0.009	0|0:0:1,0,0	0|0:0.259:0.757,0.227,0.016	1|1:2:0,0,1	0|0:0:1,0,0
+3	17752871	SNP-3.17751652.	A	G	.	PASS	AR2=1;DR2=1;AF=0.255	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17753299	SNP-3.17752080.	C	A	.	PASS	AR2=0.996;DR2=0.996;AF=0.352	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.144:0.856,0.144,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.051,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.719:0.033,0.216,0.752	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.851:0.003,0.143,0.854	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.948:0.001,0.05,0.949	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.04:0.96,0.039,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.075:0.928,0.07,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.057:0.943,0.057,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17753741	SNP-3.17752522.	C	A	.	PASS	AR2=0.99;DR2=0.993;AF=0.351	GT:DS:GP	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	1|1:1.531:0.02,0.428,0.552	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.578:0.022,0.377,0.601	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.803:0,0.197,0.803	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.364:0.058,0.519,0.422	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.594:0.04,0.327,0.633	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0,0.025,0.975	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.857:0.003,0.137,0.86	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.966:0.001,0.032,0.967	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17755529	SNP-3.17754310.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.342	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.944:0.001,0.054,0.945	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.974:0.001,0.024,0.975	1|1:2:0,0,1	1|1:1.906:0.001,0.092,0.907	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.975:0.001,0.024,0.976	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17756804	SNP-3.17755585.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.343	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.824:0.008,0.16,0.832	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.078:0.924,0.075,0.002	0|0:0:1,0,0	0|0:0.07:0.931,0.067,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.611:0.005,0.38,0.615	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.979:0,0.021,0.979	1|1:1.981:0,0.018,0.981	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.847:0.006,0.141,0.853	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.825:0.004,0.168,0.828	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.157:0.853,0.137,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.917:0.002,0.078,0.92	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17759634	SNP-3.17758415.	C	A	.	PASS	AR2=1;DR2=1;AF=0.348	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17759705	SNP-3.17758486.	C	A	.	PASS	AR2=0.997;DR2=0.998;AF=0.339	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.915:0.003,0.08,0.918	1|1:1.958:0.001,0.041,0.958	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.977:0,0.023,0.977	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.942:0.001,0.056,0.943	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.944:0,0.056,0.944	1|1:1.894:0.001,0.103,0.895	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.777:0.002,0.218,0.78	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17760048	SNP-3.17758829.	A	G	.	PASS	AR2=0.889;DR2=0.911;AF=0.217	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.206:0.802,0.19,0.008	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.684:0.478,0.36,0.162	0|0:0:1,0,0	1|0:1.016:0.248,0.487,0.264	0|0:0:1,0,0	0|1:0.785:0.38,0.455,0.165	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.748:0.39,0.471,0.139	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.008:0.234,0.525,0.242	1|1:2:0,0,1	0|1:0.668:0.445,0.443,0.113	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.061:0.248,0.444,0.309	0|1:0.605:0.449,0.497,0.054	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.739:0.402,0.457,0.141	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.382:0.632,0.355,0.014	0|0:0.338:0.674,0.315,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.122:0.882,0.113,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.135:0.871,0.122,0.006	1|0:1.149:0.18,0.492,0.329	1|1:2:0,0,1	0|0:0.347:0.668,0.318,0.014	0|1:0.748:0.383,0.486,0.131	1|1:2:0,0,1	0|0:0.306:0.717,0.26,0.023	0|0:0.399:0.638,0.324,0.038	1|1:2:0,0,1	0|0:0.139:0.87,0.12,0.01	1|1:2:0,0,1	0|0:0.088:0.915,0.083,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.11:0.892,0.105,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.987,0.013,0	0|0:0.068:0.933,0.066,0.001	1|0:0.475:0.554,0.418,0.028	0|0:0:1,0,0	1|0:1.245:0.144,0.466,0.389	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.933:0.321,0.425,0.254	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.049:0.18,0.591,0.229	0|0:0.177:0.825,0.173,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.176:0.83,0.164,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.211:0.803,0.182,0.014	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.93:0.29,0.491,0.219	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.184:0.151,0.515,0.334	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.594:0.463,0.48,0.057	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.151:0.853,0.144,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.94,0.055,0.005	0|0:0:1,0,0	0|0:0.127:0.875,0.122,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.962:0.266,0.506,0.228	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.108:0.896,0.101,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.091:0.912,0.084,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.684:0.443,0.43,0.127	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.72:0.425,0.429,0.145	0|0:0.212:0.8,0.188,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.207:0.807,0.179,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.376:0.636,0.351,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.131:0.875,0.118,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.102:0.9,0.098,0.002	0|0:0.135:0.865,0.134,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.373:0.655,0.318,0.028	0|0:0:1,0,0
+3	17761017	SNP-3.17759798.	C	A	.	PASS	AR2=1;DR2=1;AF=0.325	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17769310	SNP-3.17768091.	C	A	.	PASS	AR2=1;DR2=1;AF=0.37	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.93,0.07,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17772479	SNP-3.17771260.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.413	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.007:0.001,0.991,0.008	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.102:0.901,0.096,0.003	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.144:0.862,0.132,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0.018:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:1.996:0,0.004,0.996	1|1:1.989:0,0.011,0.989	1|1:1.992:0,0.008,0.992	1|1:1.972:0,0.028,0.972	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.874:0,0.126,0.874	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17772942	SNP-3.17771723.	A	G	.	PASS	AR2=0.994;DR2=0.995;AF=0.315	GT:DS:GP	1|1:2:0,0,1	0|0:0.024:0.976,0.024,0	0|0:0.047:0.954,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.956,0.043,0.001	0|0:0.083:0.921,0.076,0.003	1|0:1:0,1,0	0|0:0:1,0,0	0|1:0.967:0.033,0.967,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.94,0.058,0.001	0|0:0:1,0,0	0|0:0.067:0.934,0.064,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.184:0.826,0.164,0.01	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.194:0.817,0.173,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.174:0.834,0.157,0.009	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.954,0.046,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.099:0.902,0.097,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17776061	SNP-3.17774842.	C	A	.	PASS	AR2=0.991;DR2=0.993;AF=0.31	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.466:0.536,0.462,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.764:0.017,0.202,0.781	1|1:2:0,0,1	1|1:1.729:0.017,0.237,0.746	1|1:2:0,0,1	1|1:1.82:0.009,0.163,0.829	1|1:1.755:0.02,0.206,0.775	1|1:1.776:0.013,0.199,0.788	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.889:0.003,0.105,0.892	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17776178	SNP-3.17774959.	C	A	.	PASS	AR2=0.985;DR2=0.991;AF=0.277	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.278:0.111,0.499,0.389	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1.314:0.121,0.443,0.435	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1.244:0.19,0.376,0.434	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1.464:0.061,0.413,0.526	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17777038	SNP-3.17775819.	C	A	.	PASS	AR2=1;DR2=1;AF=0.325	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.942,0.057,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.964,0.036,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17777759	SNP-3.17776540.	A	G	.	PASS	AR2=0.993;DR2=0.994;AF=0.216	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.025,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.734:0.015,0.237,0.748	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.874:0.004,0.118,0.878	1|1:2:0,0,1	1|1:1.29:0.069,0.572,0.359	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.845:0.003,0.149,0.848	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17781236	SNP-3.17780017.	A	G	.	PASS	AR2=0.93;DR2=0.945;AF=0.304	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.442:0.578,0.402,0.02	0|1:0.95:0.05,0.949,0	0|0:0.561:0.48,0.48,0.04	0|0:0.166:0.841,0.152,0.007	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.254:0.765,0.216,0.019	0|0:0:1,0,0	0|0:0.217:0.795,0.194,0.011	0|0:0:1,0,0	0|0:0.546:0.586,0.283,0.132	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.139:0.864,0.133,0.003	0|0:0.204:0.807,0.182,0.011	1|1:2:0,0,1	0|0:0.207:0.805,0.184,0.012	0|0:0:1,0,0	0|0:0.223:0.792,0.192,0.015	1|1:2:0,0,1	0|0:0.062:0.94,0.058,0.002	0|0:0:1,0,0	0|1:0.86:0.191,0.757,0.052	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.894:0.006,0.093,0.9	1|1:1.773:0.014,0.199,0.787	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.68:0.022,0.275,0.703	0|0:0:1,0,0	1|1:1.689:0.024,0.262,0.714	1|1:1.669:0.028,0.275,0.697	1|1:1.685:0.027,0.261,0.712	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.644:0.033,0.289,0.677	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.799:0.01,0.18,0.809	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.968,0.03,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.977:0.062,0.899,0.039	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.799:0.016,0.17,0.814	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.049:0.952,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.679:0.027,0.266,0.707	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.643:0.034,0.29,0.677	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.651:0.031,0.287,0.682	0|0:0.467:0.558,0.416,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.156:0.848,0.149,0.004	1|1:2:0,0,1	1|1:1.747:0.015,0.223,0.762	1|1:1.628:0.037,0.298,0.665	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.185:0.826,0.162,0.011	0|0:0.112:0.89,0.107,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.706:0.023,0.249,0.729	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.931,0.067,0.002	1|1:1.638:0.034,0.293,0.672	1|1:1.704:0.023,0.251,0.727	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.707:0.021,0.251,0.728	0|0:0:1,0,0	0|0:0.234:0.782,0.202,0.016	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.685:0.021,0.273,0.706	1|1:1.649:0.031,0.288,0.681	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.711:0.021,0.246,0.732	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.657:0.031,0.282,0.687	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.66:0.029,0.281,0.69	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.959,0.041,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.207:0.833,0.126,0.041	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.259:0.785,0.17,0.044	1|1:2:0,0,1	1|1:1.711:0.022,0.244,0.733	1|1:1.743:0.017,0.223,0.76	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.94,0.06,0.001	0|0:0.11:0.895,0.1,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.627:0.037,0.298,0.664
+3	17787709	SNP-3.17786490.	A	G	.	PASS	AR2=0.992;DR2=0.994;AF=0.212	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.727:0.014,0.246,0.741	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.849:0.002,0.147,0.851	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.8:0.007,0.186,0.807	1|1:1.571:0.028,0.373,0.599	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.015:0.985,0.015,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.855:0.008,0.129,0.863	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17788017	SNP-3.17786798.	A	G	.	PASS	AR2=0.978;DR2=0.983;AF=0.341	GT:DS:GP	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.606:0.041,0.313,0.647	1|1:1.946:0,0.054,0.946	1|1:1.919:0,0.081,0.919	1|0:1:0,1,0	1|0:1:0,1,0	1|0:0.919:0.337,0.407,0.256	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.559:0.043,0.355,0.602	1|1:2:0,0,1	1|1:1.772:0.013,0.202,0.785	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.554:0.051,0.345,0.605	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.671:0.029,0.27,0.7	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.565:0.039,0.358,0.603	1|1:1.765:0.014,0.207,0.779	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.714:0.02,0.247,0.734	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.887:0.01,0.093,0.897	1|1:1.599:0.039,0.323,0.638	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17789783	SNP-3.17788564.	A	G	.	PASS	AR2=0.99;DR2=0.992;AF=0.224	GT:DS:GP	0|0:0.075:0.926,0.073,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.074:0.928,0.07,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.105:0.898,0.099,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.944,0.056,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.94,0.059,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.131:0.874,0.122,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.108:0.896,0.101,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.946,0.053,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.921:0.001,0.077,0.922	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.619:0.017,0.346,0.636	0|0:0.053:0.948,0.051,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.796:0.01,0.184,0.806	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.966:0.001,0.031,0.968	1|1:2:0,0,1	1|1:1.958:0.001,0.04,0.959	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.966:0.001,0.031,0.967	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17790869	SNP-3.17789650.	C	A	.	PASS	AR2=0.993;DR2=0.994;AF=0.312	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.097:0.906,0.092,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.09:0.912,0.085,0.002	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.096:0.906,0.092,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.049:0.951,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.923,0.075,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.969,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.091:0.912,0.086,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.803:0.011,0.175,0.814	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.86:0.002,0.135,0.863	1|1:2:0,0,1	0|0:0.142:0.862,0.135,0.004	1|1:1.976:0,0.024,0.976	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.919:0.001,0.078,0.921	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.943,0.057,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.074:0.928,0.071,0.002	0|0:0.056:0.945,0.054,0.001	0|0:0.056:0.945,0.054,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.966:0,0.033,0.967	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	17792735	SNP-3.17791516.	C	A	.	PASS	AR2=0.988;DR2=0.99;AF=0.413	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.938,0.06,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.136:0.869,0.126,0.005	0|0:0.172:0.837,0.155,0.009	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.154:0.852,0.143,0.006	0|0:0:1,0,0	0|0:0.107:0.896,0.101,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.194:0.815,0.175,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.096:0.906,0.092,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.9:0.1,0.9,0	0|0:0:1,0,0	0|0:0.242:0.772,0.213,0.014	0|0:0:1,0,0	0|0:0.351:0.675,0.299,0.026	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.16:0.845,0.149,0.006	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.234:0.776,0.213,0.01	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.056:0.945,0.054,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.107:0.895,0.102,0.002	0|0:0:1,0,0	0|0:0.188:0.82,0.172,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.948,0.051,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.148:0.858,0.136,0.006	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.09:0.911,0.087,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17794718	SNP-3.17793499.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.302	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.876:0.004,0.116,0.88	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.908:0.001,0.089,0.909	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.907:0.002,0.088,0.909	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.872:0.004,0.12,0.876	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.874:0.004,0.118,0.878	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.774:0.007,0.212,0.781	0|0:0:1,0,0
+3	17795243	SNP-3.17794024.	A	G	.	PASS	AR2=0.993;DR2=0.994;AF=0.276	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.833:0.01,0.148,0.843	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.967:0,0.033,0.967	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.945,0.055,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.844:0.007,0.141,0.852	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.873:0.006,0.114,0.88	1|1:2:0,0,1	1|1:1.821:0.005,0.169,0.826	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.9:0.001,0.098,0.901	1|0:1.526:0.022,0.43,0.548	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:1.947:0.001,0.052,0.948	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	1|1:2:0,0,1
+3	17795350	SNP-3.17794131.	C	A	.	PASS	AR2=0.975;DR2=0.979;AF=0.279	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.795:0.009,0.186,0.805	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.803:0.01,0.177,0.813	1|1:1.975:0,0.024,0.975	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.736:0.014,0.236,0.75	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.902:0.001,0.095,0.904	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.799:0.001,0.198,0.8	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.807:0.009,0.174,0.817	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.623:0.042,0.293,0.665	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.776:0.01,0.204,0.786	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.759:0.015,0.212,0.773	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.706:0.02,0.254,0.726	1|1:1.761:0.015,0.209,0.776	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.812:0.011,0.167,0.822	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.738:0.004,0.255,0.742	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.803:0.011,0.176,0.813	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.952:0.002,0.045,0.954	1|1:1.822:0.01,0.158,0.832	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.976:0,0.023,0.977	1|1:1.97:0,0.03,0.97	1|1:1.8:0.012,0.177,0.811	1|1:2:0,0,1	1|1:1.772:0.012,0.204,0.784	0|1:1:0,1,0	1|1:1.843:0.005,0.148,0.847	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.952:0.002,0.045,0.953	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.719:0.018,0.245,0.737	1|1:1.814:0.01,0.167,0.824	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17796195	SNP-3.17794976.	C	A	.	PASS	AR2=0.999;DR2=1;AF=0.303	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.89:0.001,0.109,0.891	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	17797088	SNP-3.17795869.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.398	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.101:0.901,0.096,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.119:0.885,0.11,0.005	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0.066:0.936,0.063,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.091:0.912,0.086,0.002	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.096:0.907,0.091,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.338:0.671,0.321,0.009	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17798652	SNP-3.17797433.	C	A	.	PASS	AR2=0.958;DR2=0.966;AF=0.336	GT:DS:GP	0|0:0.011:0.989,0.011,0	1|1:2:0,0,1	1|1:1.722:0.037,0.203,0.76	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.91:0.287,0.515,0.197	0|0:0:1,0,0	1|1:1.259:0.154,0.433,0.413	1|1:1.376:0.087,0.45,0.463	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.971:0,0.028,0.971	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	1|1:1.76:0.012,0.216,0.772	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.896:0.001,0.103,0.897	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.118:0.171,0.541,0.288	1|1:2:0,0,1	0|1:1.016:0.227,0.529,0.244	1|0:1.169:0.136,0.56,0.305	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.09:0.187,0.537,0.276	1|1:2:0,0,1	1|1:1.625:0,0.374,0.626	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.554:0.044,0.357,0.599	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.936:0.002,0.06,0.938	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.936:0.002,0.059,0.938	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.617:0.043,0.296,0.66	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.934:0.002,0.061,0.937	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.193:0.809,0.19,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.556:0.006,0.432,0.562	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	1|1:1.653:0.035,0.277,0.688	1|1:1.963:0.001,0.036,0.964	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.709:0.022,0.247,0.731	1|1:1.978:0,0.021,0.979	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.792:0.001,0.205,0.794	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.96:0.001,0.039,0.96	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.473:0.072,0.384,0.544	0|0:0.069:0.935,0.062,0.004	0|0:0:1,0,0	1|0:0.889:0.263,0.586,0.152	0|0:0:1,0,0	1|0:1.326:0.085,0.504,0.411	0|0:0:1,0,0
+3	17799588	SNP-3.17798369.	A	G	.	PASS	AR2=0.99;DR2=0.992;AF=0.316	GT:DS:GP	1|1:1.952:0,0.047,0.953	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.054:0.947,0.052,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.936:0.298,0.467,0.235	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.954:0.001,0.045,0.955	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0.389:0.648,0.315,0.037	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.578:0.014,0.393,0.593	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.199:0.81,0.182,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.04:0.96,0.04,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.126:0.88,0.115,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1
+3	17802464	SNP-3.17801245.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.222	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.096:0.906,0.092,0.002	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.92:0.002,0.076,0.922	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17802533	SNP-3.17801314.	C	A	.	PASS	AR2=1;DR2=1;AF=0.329	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17803332	SNP-3.17802113.	C	A	.	PASS	AR2=0.964;DR2=0.973;AF=0.356	GT:DS:GP	0|0:0.207:0.803,0.187,0.01	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.024:0.976,0.024,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.929,0.069,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.34:0.661,0.338,0.001	0|0:0.108:0.895,0.102,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.083:0.918,0.08,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0.322:0.705,0.268,0.027	0|1:1.051:0.307,0.335,0.358	0|0:0.31:0.716,0.259,0.026	0|0:0.255:0.763,0.219,0.018	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.297:0.726,0.251,0.023	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.318:0.709,0.265,0.026	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.112:0.892,0.105,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:1.721:0.011,0.257,0.732	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:1.89:0.002,0.106,0.892	1|1:1.911:0,0.088,0.911	1|1:2:0,0,1	0|0:0.48:0.562,0.396,0.042	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.312:0.714,0.26,0.026	1|1:1.992:0,0.007,0.993	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.169:0.835,0.162,0.004	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:1.974:0,0.025,0.974	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.301:0.723,0.252,0.024	0|0:0:1,0,0	0|0:0.243:0.77,0.217,0.013	0|0:0:1,0,0	0|0:0.148:0.856,0.141,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.134:0.871,0.124,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0.093:0.908,0.09,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.133:0.872,0.124,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.113:0.89,0.107,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0.139:0.865,0.131,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.1:0.902,0.096,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.133:0.871,0.124,0.005	0|0:0.135:0.869,0.126,0.005	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.133:0.872,0.124,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.134:0.87,0.125,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.181:0.826,0.166,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.082:0.921,0.075,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.983:0,0.017,0.983	0|0:0:1,0,0
+3	17805262	SNP-3.17804043.	C	A	.	PASS	AR2=1;DR2=1;AF=0.327	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17806401	SNP-3.17805182.	C	A	.	PASS	AR2=0.995;DR2=0.995;AF=0.337	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.13:0.874,0.122,0.004	0|0:0.126:0.878,0.118,0.004	0|0:0.04:0.961,0.039,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.1:0.901,0.097,0.002	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.176:0.834,0.156,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0.035:0.965,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:1.979:0,0.02,0.98	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.931:0.001,0.066,0.932	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.975:0,0.025,0.975	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.023,0.001	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.81:0.004,0.182,0.814	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.937:0.001,0.061,0.938	0|0:0:1,0,0
+3	17806488	SNP-3.17805269.	A	G	.	PASS	AR2=1;DR2=1;AF=0.296	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17806804	SNP-3.17805585.	C	A	.	PASS	AR2=1;DR2=1;AF=0.331	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17810344	SNP-3.17809125.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.238	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.086:0.917,0.08,0.003	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.131:0.871,0.126,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.946,0.054,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.958,0.042,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17811027	SNP-3.17809808.	C	A	.	PASS	AR2=0.988;DR2=0.991;AF=0.284	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.043:0.957,0.043,0	1|0:0.678:0.364,0.593,0.043	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.381:0.095,0.429,0.476	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.888:0.001,0.111,0.889	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.098:0.01,0.882,0.108	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.3:0.013,0.674,0.313	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.951:0,0.049,0.951	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.871:0.005,0.119,0.876	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.984:0,0.016,0.984	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:1.733:0.006,0.255,0.739	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17811450	SNP-3.17810231.	A	G	.	PASS	AR2=0.98;DR2=0.986;AF=0.308	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:0.706:0.391,0.512,0.097	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.371:0.657,0.315,0.028	0|0:0.229:0.78,0.211,0.009	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.817:0.005,0.172,0.823	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.438:0.593,0.375,0.031	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.372:0.66,0.309,0.032	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0.396:0.642,0.321,0.037	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.304:0.715,0.266,0.019	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.498:0.561,0.38,0.059	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.123:0.883,0.112,0.005	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17811831	SNP-3.17810612.	A	G	.	PASS	AR2=1;DR2=1;AF=0.224	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17812437	SNP-3.17811218.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.326	GT:DS:GP	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.371:0.667,0.296,0.037	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.101:0.901,0.097,0.002	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.211:0.8,0.189,0.011	0|0:0.066:0.935,0.065,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.026,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17812885	SNP-3.17811666.	C	A	.	PASS	AR2=0.992;DR2=0.993;AF=0.34	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.084:0.918,0.08,0.002	0|0:0.127:0.877,0.118,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.087:0.915,0.084,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.903,0.096,0	0|0:0:1,0,0	0|0:0.129:0.875,0.121,0.004	0|0:0.053:0.948,0.051,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.037:0.014,0.935,0.051	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.116:0.887,0.11,0.003	0|0:0:1,0,0	0|0:0.096:0.906,0.092,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.049:0.951,0.048,0.001	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.154:0.852,0.142,0.006	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.256:0.761,0.223,0.016	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.951,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.127:0.877,0.119,0.004	0|0:0.096:0.907,0.091,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.075:0.927,0.072,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.984,0.016,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17814827	SNP-3.17813608.	C	A	.	PASS	AR2=0.944;DR2=0.96;AF=0.343	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0.586:0.503,0.408,0.089	0|0:0.055:0.945,0.055,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.272:0.745,0.239,0.016	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.019:0.981,0.018,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.491:0.559,0.39,0.05	0|0:0.196:0.817,0.17,0.013	0|0:0.331:0.699,0.271,0.03	0|0:0.487:0.573,0.366,0.06	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1	0|0:0.022:0.979,0.021,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.396:0.645,0.314,0.041	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.125:0.878,0.119,0.003	0|0:0.274:0.742,0.243,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.567:0.492,0.449,0.059	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.42:0.605,0.371,0.025	0|0:0:1,0,0	0|0:0.073:0.93,0.068,0.002	0|0:0:1,0,0	0|0:0.05:0.951,0.048,0.001	1|0:0.64:0.423,0.515,0.063	0|0:0.107:0.896,0.102,0.002	0|0:0.046:0.954,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.954,0.045,0.001	1|1:2:0,0,1	1|1:1.929:0.001,0.069,0.93	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.944:0,0.055,0.944	0|1:0.621:0.46,0.458,0.082	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.191:0.159,0.491,0.35	0|1:1.173:0.043,0.742,0.216	0|0:0.621:0.46,0.458,0.082	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.171:0.048,0.734,0.219	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.425:0.041,0.494,0.465	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0.003:0.997,0.003,0	1|1:1.43:0.044,0.481,0.474	1|1:1.939:0,0.06,0.94	0|0:0:1,0,0	1|1:1.966:0,0.033,0.966	1|1:2:0,0,1	1|1:1.954:0,0.046,0.954	1|1:1.954:0.001,0.045,0.954	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.889:0.003,0.106,0.891	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.925:0.001,0.073,0.926	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.957,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.19:0.812,0.187,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.301:0.708,0.282,0.009	0|0:0.423:0.592,0.393,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.948:0.001,0.05,0.949	1|1:1.847:0.002,0.148,0.85	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.256:0.762,0.221,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.965:0,0.035,0.965	0|0:0.047:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.4:0.634,0.331,0.034	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.204:0.801,0.194,0.005	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.244:0.772,0.212,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.965,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.957,0.043,0.001	1|1:2:0,0,1	0|0:0:1,0,0
+3	17815796	SNP-3.17814577.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.326	GT:DS:GP	0|0:0.06:0.941,0.058,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.054:0.946,0.053,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.05:0.951,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.941,0.058,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.94,0.058,0.001	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.051,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.936,0.063,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.929,0.069,0.002	1|1:2:0,0,1	0|0:0:1,0,0
+3	17815870	SNP-3.17814651.	A	G	.	PASS	AR2=0.979;DR2=0.983;AF=0.357	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.384:0.616,0.384,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.258:0.761,0.22,0.019	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.16:0.85,0.139,0.01	0|0:0:1,0,0	0|0:0.133:0.871,0.124,0.005	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.095:0.908,0.089,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.013:0.987,0.013,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.025:0.975,0.024,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.976:0,0.024,0.976	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.962:0,0.037,0.963	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.189:0.811,0.189,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.097:0.903,0.097,0	0|0:0.264:0.741,0.253,0.005	1|0:0.935:0.065,0.935,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:0.73:0.406,0.458,0.136	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.632:0.398,0.571,0.03	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.973,0.026,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	1|1:1.984:0,0.015,0.984	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.194:0.819,0.168,0.013	1|0:1:0,1,0	0|0:0.154:0.849,0.147,0.004	1|1:1.958:0,0.041,0.958	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.224:0.79,0.195,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.265:0.753,0.229,0.018	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.524:0.017,0.442,0.541	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.261:0.746,0.247,0.007	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17816430	SNP-3.17815211.	A	G	.	PASS	AR2=1;DR2=1;AF=0.233	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.974:0.037,0.952,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17817749	SNP-3.17816530.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.305	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.996:0.004,0.995,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.939:0.001,0.059,0.94	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.935:0.001,0.063,0.936	0|0:0:1,0,0
+3	17818220	SNP-3.17817001.	C	A	.	PASS	AR2=0.988;DR2=0.991;AF=0.351	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.72:0.033,0.215,0.752	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.848:0,0.152,0.848	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.801:0,0.199,0.801	1|1:1.372:0.006,0.615,0.379	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.493:0,0.507,0.493	1|1:2:0,0,1	1|1:1.935:0,0.065,0.935	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.96:0,0.04,0.96	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.951:0,0.049,0.951	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.975:0,0.024,0.976	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.94:0,0.059,0.941	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.931:0,0.068,0.932	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.806:0.001,0.193,0.806	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.974:0,0.026,0.974	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.959:0.001,0.039,0.96	1|0:1:0,1,0	1|1:1.916:0.003,0.078,0.919	0|0:0:1,0,0	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.888:0.009,0.094,0.897	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.947:0.002,0.049,0.949	0|0:0:1,0,0	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.974:0,0.026,0.974	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.113:0,0.886,0.113	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17818324	SNP-3.17817105.	C	A	.	PASS	AR2=1;DR2=1;AF=0.319	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17822048	SNP-3.17820829.	C	A	.	PASS	AR2=0.99;DR2=0.993;AF=0.292	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.884:0.004,0.109,0.887	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.559:0.022,0.398,0.581	1|1:1.649:0.015,0.321,0.664	1|0:1:0,1,0	1|1:1.568:0.019,0.394,0.587	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.576:0.009,0.406,0.585	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.743:0.018,0.22,0.761	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17823232	SNP-3.17822013.	A	G	.	PASS	AR2=0.993;DR2=0.995;AF=0.368	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.028,0.972	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.955:0.001,0.044,0.955	0|0:0.083:0.918,0.081,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.249:0.197,0.357,0.446	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.953,0.047,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.983:0,0.017,0.983	0|0:0:1,0,0	0|0:0.034:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.965:0,0.035,0.965	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.965:0,0.035,0.965	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0,0.032,0.968	1|1:1.889:0.001,0.109,0.89	0|0:0:1,0,0	1|1:1.942:0,0.058,0.942	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.983:0,0.017,0.983	1|1:1.979:0,0.02,0.979	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	17823757	SNP-3.17822538.	C	A	.	PASS	AR2=0.964;DR2=0.976;AF=0.347	GT:DS:GP	0|0:0:1,0,0	1|0:0.623:0.478,0.42,0.101	0|0:0.623:0.478,0.42,0.101	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0.571:0.513,0.403,0.084	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.161:0.121,0.597,0.282	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.02:0.98,0.02,0	0|0:0.027:0.974,0.026,0	0|0:0.009:0.991,0.009,0	0|0:0.031:0.969,0.03,0	0|0:0.452:0.599,0.35,0.051	0|0:0.018:0.982,0.018,0	0|0:0.083:0.918,0.082,0.001	1|1:2:0,0,1	0|0:0.032:0.968,0.032,0	0|0:0:1,0,0	0|0:0.037:0.963,0.036,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.238:0.768,0.225,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.46:0.594,0.352,0.054	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.974,0.026,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0.083:0.919,0.08,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.961,0.039,0	0|0:0:1,0,0	0|0:0.039:0.961,0.039,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.941,0.058,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.021:0,0.979,0.021	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.383:0.643,0.331,0.026	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.207:0.807,0.18,0.014	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.046:0.954,0.046,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.534:0.538,0.389,0.073	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.018:0.982,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.97,0.03,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0.58:0.53,0.361,0.11	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.16:0.856,0.128,0.016	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.467:0.122,0.29,0.588	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17824014	SNP-3.17822795.	C	A	.	PASS	AR2=0.98;DR2=0.984;AF=0.277	GT:DS:GP	0|0:0:1,0,0	1|0:1.2:0.172,0.456,0.372	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.357:0.656,0.332,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.637:0.034,0.294,0.671	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1.217:0.105,0.572,0.323	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.295:0.092,0.521,0.387	0|1:1:0,1,0	1|0:1.23:0,0.769,0.231	0|0:0.169:0.831,0.169,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.929:0,0.07,0.929	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.902:0.002,0.094,0.904	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.963:0,0.036,0.963	1|1:1.978:0,0.021,0.978	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.856:0.002,0.139,0.859	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.777:0.009,0.206,0.786	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.72:0.341,0.598,0.061	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17825278	SNP-3.17824059.	C	A	.	PASS	AR2=1;DR2=1;AF=0.309	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17828059	SNP-3.17826840.	A	G	.	PASS	AR2=0.991;DR2=0.993;AF=0.26	GT:DS:GP	0|0:0.062:0.939,0.06,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.246:0.764,0.226,0.01	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.202:0.805,0.188,0.007	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.186:0.818,0.177,0.005	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.181:0.826,0.167,0.007	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.928,0.068,0.004	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.054:0.949,0.049,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.488:0.543,0.426,0.031	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17828261	SNP-3.17827042.	C	A	.	PASS	AR2=0.945;DR2=0.958;AF=0.416	GT:DS:GP	0|0:0.309:0.714,0.262,0.024	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.006:0.994,0.006,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	0|1:0.69:0.32,0.67,0.01	0|0:0.037:0.963,0.037,0	0|0:0.052:0.95,0.047,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.968,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0.008:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.166:0.838,0.157,0.004	0|0:0.34:0.689,0.282,0.029	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.345:0.685,0.285,0.03	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.318:0.708,0.267,0.025	0|0:0.346:0.684,0.285,0.03	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.353:0.678,0.291,0.031	0|0:0.329:0.698,0.275,0.027	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.275:0.742,0.241,0.017	0|0:0.062:0.94,0.058,0.002	0|0:0.342:0.687,0.284,0.029	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.32:0.706,0.269,0.025	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.145:0.001,0.853,0.146	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.216:0.792,0.2,0.008	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.467:0.072,0.389,0.539	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.478:0.071,0.38,0.549	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.199:0.807,0.187,0.006	1|1:2:0,0,1	0|0:0.224:0.785,0.206,0.009	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0.023:0.977,0.023,0	1|0:1:0,1,0	1|1:1.273:0.113,0.501,0.386	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.965,0.034,0	0|0:0:1,0,0	0|0:0.319:0.706,0.268,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.303:0.72,0.257,0.023	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.106:0.898,0.098,0.004	1|1:1.986:0,0.013,0.987	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.345:0.685,0.285,0.03	1|1:1.539:0.058,0.346,0.597	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.344:0.686,0.284,0.03	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.344:0.685,0.285,0.03	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.259:0.743,0.256,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.348:0.681,0.289,0.029	0|0:0.345:0.685,0.285,0.03	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.038:0.962,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.344:0.685,0.285,0.03	0|0:0.101:0.907,0.084,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.993,0.007,0	0|0:0.348:0.683,0.287,0.03	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.344:0.685,0.285,0.03	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.75:0.382,0.486,0.132	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0
+3	17831799	SNP-3.17830580.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.351	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.139:0.862,0.137,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.943,0.056,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.091:0.91,0.089,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17831851	SNP-3.17830632.	C	A	.	PASS	AR2=0.965;DR2=0.973;AF=0.399	GT:DS:GP	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.061:0.941,0.058,0.002	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.322:0.702,0.273,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.357:0.673,0.298,0.029	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.221:0.79,0.2,0.011	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.173:0.834,0.16,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.392:0.644,0.32,0.036	0|0:0:1,0,0	0|1:0.547:0.499,0.454,0.046	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.324:0.677,0.321,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.316:0.702,0.28,0.018	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.331:0.689,0.292,0.019	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.256:0.756,0.232,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.23:0.782,0.205,0.012	0|0:0:1,0,0	0|0:0.189:0.823,0.165,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.195:0.811,0.184,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.216:0.788,0.207,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.166:0.836,0.162,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.184:0.827,0.162,0.011	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0.245:0.764,0.227,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.333:0.684,0.299,0.017	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.144:0.866,0.125,0.01	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.395:0.65,0.304,0.046	0|0:0.179:0.825,0.172,0.004	0|0:0.303:0.717,0.263,0.02	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.198:0.818,0.167,0.015	0|0:0.33:0.682,0.306,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.203:0.802,0.193,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.081:0.92,0.079,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.048:0.955,0.042,0.003	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17834227	SNP-3.17833008.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.341	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.034,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.942,0.057,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.065:0.935,0.065,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17835071	SNP-3.17833852.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.405	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.111:0.89,0.11,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:1.951:0,0.049,0.951	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0,0.025,0.975	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.18:0,0.82,0.18	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.934:0,0.066,0.934	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.991:0.009,0.991,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.974:0,0.025,0.974	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17836160	SNP-3.17834941.	C	A	.	PASS	AR2=0.993;DR2=0.994;AF=0.355	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.116:0.888,0.109,0.003	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.164:0.843,0.15,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.117:0.887,0.11,0.003	0|0:0:1,0,0	0|0:0.081:0.921,0.077,0.002	0|0:0.118:0.886,0.11,0.004	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.133:0.871,0.124,0.004	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.347:0.655,0.342,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.066:0.002,0.929,0.068	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.092:0.911,0.086,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.135:0.869,0.127,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.102:0.9,0.097,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17842285	SNP-3.17841066.	C	A	.	PASS	AR2=1;DR2=1;AF=0.331	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17843926	SNP-3.17842707.	A	G	.	PASS	AR2=0.973;DR2=0.98;AF=0.483	GT:DS:GP	1|1:1.778:0.01,0.202,0.788	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.693:0.023,0.26,0.716	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.7:0.022,0.255,0.722	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.055:0.945,0.055,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.758:0.013,0.216,0.771	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.792:0.011,0.186,0.803	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.91:0.003,0.085,0.913	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.87:0.005,0.119,0.876	1|1:1.746:0.014,0.227,0.759	1|1:2:0,0,1	1|1:1.763:0.011,0.215,0.774	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.166:0.841,0.151,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.183:0.825,0.167,0.008	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.93:0.121,0.828,0.051	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.687:0.021,0.272,0.708	0|0:0:1,0,0	0|0:0.124:0.877,0.121,0.002	0|0:0:1,0,0	0|0:0.106:0.897,0.1,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.515:0.527,0.43,0.043	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.708:0.019,0.254,0.727	1|1:1.775:0.012,0.2,0.788	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.718:0.018,0.247,0.735	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.943:0.065,0.926,0.008	1|1:2:0,0,1	1|1:1.852:0.006,0.136,0.858	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.595:0.47,0.464,0.066	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17845162	SNP-3.17843943.	A	G	.	PASS	AR2=0.908;DR2=0.93;AF=0.303	GT:DS:GP	1|0:1.355:0.119,0.407,0.474	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.17:0.837,0.156,0.007	0|0:0:1,0,0	0|0:0.112:0.894,0.101,0.006	0|0:0.139:0.866,0.129,0.005	1|1:2:0,0,1	0|0:0.228:0.784,0.204,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.288:0.733,0.246,0.021	0|0:0:1,0,0	0|0:0.259:0.753,0.234,0.013	1|1:2:0,0,1	0|0:0.135:0.868,0.128,0.003	0|0:0:1,0,0	0|0:0.096:0.906,0.091,0.003	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.175:0.834,0.158,0.009	1|1:2:0,0,1	0|0:0.068:0.932,0.068,0	0|0:0.375:0.659,0.306,0.034	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.238:0.781,0.201,0.018	0|0:0:1,0,0	0|0:0.148:0.86,0.133,0.007	0|0:0.265:0.755,0.225,0.02	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.362:0.661,0.317,0.023	1|1:2:0,0,1	0|1:1.432:0.071,0.426,0.503	0|0:0:1,0,0	0|0:0.034:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.582:0.045,0.328,0.627	0|0:0.9:0.262,0.576,0.162	0|1:1.019:0.148,0.684,0.168	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.639:0.034,0.293,0.673	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.737:0.018,0.227,0.755	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.69:0.026,0.258,0.716	1|1:1.472:0.076,0.376,0.548	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.463:0.076,0.385,0.539	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.5:0.068,0.363,0.569	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.279:0.741,0.239,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.775:0.013,0.199,0.788	0|0:0:1,0,0	0|0:0.193:0.816,0.174,0.009	0|0:0.169:0.835,0.16,0.005	0|0:0.275:0.744,0.236,0.019	0|0:0:1,0,0	0|0:0.127:0.873,0.126,0.001	0|0:0:1,0,0	0|0:0.111:0.889,0.111,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.177:0.832,0.16,0.009	0|0:0.212:0.802,0.185,0.013	0|0:0:1,0,0	0|0:0.166:0.841,0.153,0.006	0|0:0:1,0,0	0|0:0.284:0.736,0.243,0.02	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.17:0.837,0.156,0.007	0|0:0:1,0,0	1|1:1.793:0.011,0.185,0.804	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.334:0.694,0.279,0.028	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.028:0.106,0.759,0.135	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:1.331:0.191,0.287,0.522	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.634:0.035,0.297,0.668	1|1:2:0,0,1	1|1:1.879:0.006,0.11,0.885	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.797:0.011,0.182,0.807	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.286:0.714,0.286,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.938,0.062,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.304:0.719,0.258,0.023	0|0:0.292:0.728,0.252,0.02	0|0:0.327:0.699,0.275,0.026	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.155:0.849,0.146,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.072:0.928,0.072,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.356:0.103,0.437,0.46	0|1:1.013:0.132,0.723,0.145	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.095:0.908,0.089,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.161:0.85,0.139,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.298:0.73,0.242,0.028	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.83:0.008,0.154,0.838	0|0:0.175:0.825,0.175,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.621:0.582,0.214,0.204	0|0:0.111:0.892,0.104,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17845517	SNP-3.17844298.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.377	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.831:0.004,0.16,0.835	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.936:0.001,0.062,0.937	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17846359	SNP-3.17845140.	A	G	.	PASS	AR2=0.967;DR2=0.973;AF=0.276	GT:DS:GP	0|0:0.23:0.783,0.204,0.013	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.96:0,0.039,0.961	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.202:0.808,0.182,0.01	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.207:0.806,0.18,0.014	0|0:0:1,0,0	0|0:0.187:0.822,0.169,0.009	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.041:0.959,0.04,0.001	0|0:0:1,0,0	0|0:0.035:0.965,0.035,0	0|0:0.027:0.973,0.027,0	0|0:0.045:0.956,0.044,0.001	0|0:0.195:0.815,0.175,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.182:0.826,0.165,0.009	0|0:0.472:0.595,0.338,0.067	1|1:1.414:0.09,0.406,0.504	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.4:0.648,0.303,0.048	0|0:0:1,0,0	0|0:0.278:0.739,0.244,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.97,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.297:0.719,0.265,0.016	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.079:0.923,0.074,0.002	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.968,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.145:0.864,0.128,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.193:0.817,0.174,0.01	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.94:0.001,0.058,0.941	1|1:2:0,0,1	0|0:0.04:0.96,0.039,0.001	0|0:0:1,0,0	0|0:0.065:0.936,0.063,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.306:0.695,0.305,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.958:0,0.041,0.959	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.927:0.288,0.496,0.216	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.95,0.049,0.001	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0.034:0.967,0.032,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.824:0.301,0.574,0.125	0|0:0:1,0,0	0|0:0.157:0.852,0.138,0.009	0|0:0:1,0,0	0|0:0:1,0,0
+3	17846743	SNP-3.17845524.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.345	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.932,0.067,0.001	0|0:0:1,0,0	0|0:0.039:0.962,0.038,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17846903	SNP-3.17845684.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.511	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.956:0,0.043,0.956	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.943:0.001,0.056,0.944	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.056:0.944,0.056,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.946:0.001,0.053,0.947	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.938:0.001,0.059,0.939	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17847862	SNP-3.17846643.	A	G	.	PASS	AR2=0.995;DR2=0.997;AF=0.372	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.626:0,0.374,0.626	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.589:0,0.41,0.589	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.213:0.003,0.781,0.216	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.907:0,0.093,0.907	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	17848071	SNP-3.17846852.	A	G	.	PASS	AR2=0.995;DR2=0.996;AF=0.321	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:0.632:0.441,0.486,0.073	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.355:0.723,0.199,0.078	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	17850031	SNP-3.17848812.	A	G	.	PASS	AR2=1;DR2=1;AF=0.319	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17850248	SNP-3.17849029.	C	A	.	PASS	AR2=1;DR2=1;AF=0.315	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17851173	SNP-3.17849954.	C	A	.	PASS	AR2=1;DR2=1;AF=0.302	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17854397	SNP-3.17853178.	A	G	.	PASS	AR2=1;DR2=1;AF=0.377	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	17854705	SNP-3.17853486.	A	G	.	PASS	AR2=1;DR2=1;AF=0.292	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.968:0,0.031,0.968	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17856249	SNP-3.17855030.	A	G	.	PASS	AR2=0.995;DR2=0.996;AF=0.369	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.926:0.002,0.07,0.928	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.883:0.003,0.11,0.887	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.959,0.041,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.913:0.002,0.082,0.915	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.854:0.006,0.135,0.859	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.128:0.875,0.122,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	0|0:0.036:0.965,0.035,0	1|1:2:0,0,1	1|1:1.865:0.005,0.126,0.869	1|1:1.945:0.002,0.051,0.947	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.882:0.004,0.109,0.887	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	17858169	SNP-3.17856950.	C	A	.	PASS	AR2=0.992;DR2=0.993;AF=0.344	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.063:0.939,0.059,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.107:0.896,0.101,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.094:0.908,0.09,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.124:0.88,0.116,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.103:0.9,0.098,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.185:0.824,0.167,0.009	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0.1:0.903,0.095,0.003	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.1:0.902,0.096,0.002	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.113:0.89,0.107,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.066:0.936,0.062,0.002	0|0:0:1,0,0	0|0:0.079:0.925,0.071,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.084:0.918,0.08,0.002	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.255:0.763,0.218,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.093:0.909,0.088,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17858214	SNP-3.17856995.	A	G	.	PASS	AR2=0.92;DR2=0.936;AF=0.322	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.883:0.201,0.714,0.084	1|1:1.735:0.025,0.215,0.76	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	0|0:0.419:0.615,0.351,0.034	0|0:0.015:0.985,0.014,0	0|0:0.168:0.839,0.154,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.213:0.799,0.189,0.012	0|0:0:1,0,0	0|0:0.451:0.592,0.365,0.043	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0.03:0.971,0.028,0.001	1|1:2:0,0,1	0|0:0.227:0.786,0.202,0.012	0|0:0:1,0,0	0|0:0.268:0.752,0.228,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.236:0.777,0.21,0.013	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.141:0.871,0.117,0.012	0|0:0:1,0,0	1|1:1.65:0.03,0.29,0.68	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.192:0.819,0.17,0.011	0|0:0:1,0,0	0|0:0.021:0.979,0.02,0	1|1:1.727:0.019,0.235,0.746	1|1:1.664:0.028,0.279,0.692	1|1:1.814:0.006,0.175,0.82	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.706:0.021,0.251,0.728	1|1:1.667:0.028,0.277,0.695	1|1:2:0,0,1	1|1:1.728:0.019,0.234,0.747	1|1:1.75:0.019,0.211,0.77	1|1:2:0,0,1	1|1:1.753:0.018,0.21,0.772	1|1:1.755:0.015,0.215,0.77	1|1:2:0,0,1	0|0:0.096:0.91,0.084,0.006	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.759:0.018,0.205,0.777	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.728:0.019,0.234,0.747	1|1:2:0,0,1	1|1:1.907:0.002,0.088,0.91	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.57:0.043,0.343,0.614	1|1:1.716:0.017,0.251,0.732	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.671:0.027,0.274,0.698	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.604:0.397,0.602,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.101:0.901,0.097,0.002	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.953,0.046,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.706:0.022,0.25,0.728	1|1:1.667:0.027,0.28,0.694	1|1:2:0,0,1	1|1:1.561:0.04,0.359,0.601	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.669:0.028,0.276,0.696	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.655:0.032,0.281,0.687	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.203:0.807,0.183,0.01	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.371:0.661,0.306,0.033	0|0:0.299:0.722,0.256,0.022	0|0:0:1,0,0	0|0:0.26:0.76,0.221,0.02	1|1:2:0,0,1	1|1:1.728:0.019,0.234,0.747	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.635:0.035,0.295,0.67	1|1:1.411:0.106,0.378,0.517	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.807:0.013,0.166,0.821	0|0:0.21:0.802,0.186,0.012	0|0:0.283:0.734,0.249,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.61:0.039,0.312,0.649	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	1|1:1.697:0.023,0.256,0.721	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.66:0.027,0.285,0.688	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.588:0.044,0.324,0.632	0|0:0:1,0,0	0|0:0.219:0.795,0.191,0.014	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.886:0.008,0.099,0.893	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.728:0.019,0.234,0.747	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.754:0.015,0.215,0.769	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.088:0.916,0.08,0.004	1|1:1.825:0.011,0.152,0.837	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.805:0.003,0.19,0.807	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.711:0.022,0.246,0.732
+3	17858548	SNP-3.17857329.	C	A	.	PASS	AR2=0.993;DR2=0.994;AF=0.313	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:0.705:0.421,0.454,0.125	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.705:0.421,0.454,0.125	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.705:0.421,0.454,0.125	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17859237	SNP-3.17858018.	A	G	.	PASS	AR2=1;DR2=1;AF=0.241	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17859404	SNP-3.17858185.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.281	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.924:0.001,0.073,0.925	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.16:0.063,0.714,0.223	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.784:0.008,0.2,0.792	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.924:0.001,0.073,0.926	1|1:1.901:0.003,0.094,0.903	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1.088:0.028,0.856,0.116	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.857:0.007,0.129,0.864	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17859425	SNP-3.17858206.	C	A	.	PASS	AR2=1;DR2=1;AF=0.309	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17861061	SNP-3.17859842.	C	A	.	PASS	AR2=1;DR2=1;AF=0.309	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17861116	SNP-3.17859897.	A	G	.	PASS	AR2=0.871;DR2=0.907;AF=0.25	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.154:0.852,0.142,0.006	0|0:0:1,0,0	0|0:0.151:0.856,0.138,0.006	1|0:0.63:0.397,0.576,0.027	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.292:0.725,0.258,0.017	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.57:0.511,0.408,0.081	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:0.948:0.285,0.483,0.232	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.577:0.103,0.217,0.68	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.484:0.578,0.36,0.062	1|1:2:0,0,1	1|0:0.654:0.458,0.429,0.112	0|0:0.573:0.504,0.418,0.078	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.314:0.721,0.243,0.036	0|0:0.273:0.749,0.23,0.021	0|0:0.315:0.721,0.243,0.036	0|0:0:1,0,0	1|0:0.648:0.448,0.456,0.096	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.42:0.63,0.32,0.05	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.301:0.722,0.255,0.023	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.041:0.086,0.787,0.127	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.961,0.039,0	0|0:0:1,0,0	0|0:0.246:0.77,0.213,0.016	0|0:0.265:0.754,0.227,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.161:0.163,0.512,0.325	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.358:0.677,0.289,0.035	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.51:0.556,0.378,0.066	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.126:0.15,0.574,0.276	0|0:0:1,0,0	0|0:0.536:0.537,0.39,0.073	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.078:0.924,0.073,0.002	1|1:2:0,0,1	0|0:0.439:0.612,0.336,0.052	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.928:0.318,0.435,0.246	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.529:0.542,0.387,0.071	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.331:0.677,0.314,0.008	1|0:1.239:0.15,0.461,0.389	0|0:0:1,0,0	0|0:0.184:0.833,0.149,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.032,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.498:0.564,0.375,0.062	1|0:1.141:0.122,0.615,0.263	1|0:1.312:0.022,0.644,0.334	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.115:0.889,0.108,0.003	0|0:0.452:0.591,0.366,0.043	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.014:0.987,0.013,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.312:0.72,0.248,0.032	0|0:0:1,0,0	0|0:0.67:0.435,0.46,0.105	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.69:0.472,0.366,0.162	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.496:0.542,0.419,0.039	1|1:2:0,0,1	0|0:0.451:0.597,0.354,0.049	0|0:0:1,0,0	1|1:1.282:0.125,0.468,0.407	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.235:0.778,0.209,0.013	0|0:0.035:0.966,0.033,0.001	1|1:2:0,0,1	0|0:0.014:0.986,0.013,0	0|0:0.135:0.87,0.124,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.611:0.482,0.424,0.093	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.58:0.507,0.405,0.088	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.948,0.051,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.334:0.693,0.279,0.028	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|0:1.379:0.081,0.458,0.46	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.482:0.577,0.364,0.059
+3	17861866	SNP-3.17860647.	A	G	.	PASS	AR2=1;DR2=1;AF=0.216	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17863220	SNP-3.17862001.	C	A	.	PASS	AR2=0.997;DR2=0.997;AF=0.344	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.054:0.946,0.054,0	0|0:0:1,0,0	0|0:0.047:0.954,0.046,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.09:0.913,0.083,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.062:0.939,0.06,0.001	0|0:0:1,0,0	0|0:0.045:0.955,0.044,0.001	0|0:0.039:0.962,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.083:0.919,0.079,0.002	0|0:0:1,0,0	0|0:0.04:0.961,0.039,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.155:0.854,0.138,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.938,0.061,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17864056	SNP-3.17862837.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.304	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.751:0.01,0.229,0.761	1|1:1.943:0.002,0.052,0.945	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.664:0.045,0.246,0.709	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17865173	SNP-3.17863954.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.239	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.1:0,0.899,0.101	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17865357	SNP-3.17864138.	C	A	.	PASS	AR2=0.979;DR2=0.982;AF=0.337	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.161:0.182,0.474,0.343	0|0:0:1,0,0	1|1:1.161:0.182,0.474,0.343	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.457:0.073,0.396,0.53	0|0:0.316:0.754,0.176,0.07	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.116:0.214,0.457,0.329	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.193:0.166,0.475,0.359	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.091:0.909,0.091,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.232:0.15,0.468,0.382	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.193:0.166,0.475,0.359	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.099:0.913,0.075,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17872703	SNP-3.17871484.	C	A	.	PASS	AR2=0.981;DR2=0.986;AF=0.287	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.043:0.958,0.042,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.116:0.887,0.109,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0.039:0.961,0.039,0	0|0:0.026:0.974,0.026,0	0|0:0.04:0.96,0.04,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1.003:0.178,0.642,0.18	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.675:0.027,0.27,0.702	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.743:0.003,0.25,0.747	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.815:0.007,0.172,0.822	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.493:0.072,0.362,0.565	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.946,0.053,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.058:0.943,0.056,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.092:0.91,0.088,0.002	0|0:0.076:0.925,0.074,0.001	0|0:0:1,0,0	0|0:0.112:0.892,0.105,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.984:0,0.015,0.984	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.425:0.608,0.358,0.034	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.488:0.057,0.398,0.545	0|0:0:1,0,0
+3	17874141	SNP-3.17872922.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.221	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.981:0.064,0.89,0.045	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.862:0.005,0.128,0.867	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.865:0.005,0.125,0.87	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17877248	SNP-3.17876029.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.312	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.035:0.967,0.032,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.118:0.888,0.106,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.962,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.096:0.907,0.089,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17878064	SNP-3.17876845.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.486	GT:DS:GP	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.93:0.001,0.069,0.93	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.935,0.063,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.034,0	1|1:1.985:0,0.015,0.985	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.942:0.001,0.055,0.943	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.944:0,0.056,0.944	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.988:0.018,0.975,0.007	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.951:0.002,0.044,0.953	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0.023:0.977,0.022,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.956:0.002,0.039,0.959	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	1|1:2:0,0,1	0|0:0:1,0,0
+3	17878462	SNP-3.17877243.	A	G	.	PASS	AR2=0.836;DR2=0.874;AF=0.35	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.654:0.026,0.294,0.68	0|1:1.387:0.094,0.425,0.481	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.388:0.096,0.42,0.484	0|1:0.806:0.203,0.788,0.009	0|0:0:1,0,0	1|1:1.752:0.019,0.209,0.771	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.394:0.092,0.422,0.486	1|1:2:0,0,1	0|1:1.386:0.096,0.421,0.482	1|0:1.394:0.092,0.422,0.486	0|0:0:1,0,0	1|1:1.438:0.08,0.403,0.518	1|1:1.478:0.069,0.384,0.547	0|0:0:1,0,0	0|1:1.407:0.088,0.417,0.495	1|1:2:0,0,1	1|1:0.97:0.241,0.548,0.211	1|0:0.987:0.222,0.569,0.209	0|0:0.946:0.261,0.532,0.207	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.557:0.066,0.312,0.622	0|1:1.072:0.212,0.504,0.284	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.108:0.202,0.488,0.31	1|0:1.031:0.232,0.505,0.263	1|0:0.955:0.24,0.565,0.195	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.199:0.131,0.539,0.33	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.401:0.098,0.403,0.499	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.335:0.109,0.446,0.445	0|1:0.776:0.39,0.443,0.166	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.533:0.586,0.295,0.119	0|1:1.49:0.074,0.361,0.564	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.286:0.715,0.283,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.623:0.048,0.281,0.671	0|0:0:1,0,0	1|0:0.579:0.454,0.513,0.033	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.135:0.211,0.444,0.346	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.445:0.605,0.345,0.05	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.527:0.064,0.345,0.591	1|1:2:0,0,1	1|0:1.256:0.139,0.465,0.395	0|0:0:1,0,0	0|1:1.366:0.116,0.402,0.482	1|1:1.547:0.063,0.327,0.61	1|1:1.538:0.043,0.375,0.581	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.512:0.072,0.345,0.583	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.4:0.09,0.42,0.49	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.205:0.164,0.467,0.369	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.002:0.202,0.594,0.204	1|0:1.242:0.14,0.479,0.382	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.396:0.091,0.421,0.488	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.41:0.088,0.415,0.497	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.129:0.188,0.495,0.317	0|0:0:1,0,0	1|0:1.012:0.246,0.497,0.257	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.477:0.074,0.375,0.551	0|1:1.12:0.184,0.512,0.304	0|0:0:1,0,0	1|0:1.127:0.173,0.527,0.3	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.269:0.734,0.262,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.844:0.011,0.134,0.855	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.451:0.076,0.397,0.527	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.685:0.325,0.665,0.01	1|1:1.433:0.089,0.388,0.523	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.456:0.075,0.395,0.53	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.674:0.442,0.442,0.116	1|1:1.819:0.04,0.101,0.859	0|1:0.729:0.405,0.461,0.134	1|1:1.273:0.135,0.457,0.408	0|0:0:1,0,0	1|1:1.338:0.113,0.436,0.451	0|1:1.027:0.225,0.523,0.252	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.051:0.243,0.464,0.293	0|0:0.697:0.429,0.446,0.125	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.548:0.059,0.334,0.607	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.493:0.571,0.365,0.064	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.188:0.169,0.475,0.356
+3	17878731	SNP-3.17877512.	C	A	.	PASS	AR2=0.997;DR2=0.997;AF=0.333	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0.037:0.963,0.036,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.902:0.002,0.093,0.905	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.97,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|0:0.89:0.135,0.84,0.025	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:1.876:0,0.124,0.876	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.17:0.834,0.162,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.022,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.039:0.962,0.038,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0
+3	17879535	SNP-3.17878316.	C	A	.	PASS	AR2=0.99;DR2=0.993;AF=0.296	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.76:0.008,0.223,0.768	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.832:0.01,0.147,0.843	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.866:0.008,0.118,0.874	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.827:0.002,0.169,0.829	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.676:0.324,0.676,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.691:0.023,0.263,0.714	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.095:0.908,0.089,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.906:0,0.094,0.906	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.673:0.023,0.28,0.696	0|0:0:1,0,0
+3	17879666	SNP-3.17878447.	A	G	.	PASS	AR2=0.886;DR2=0.896;AF=0.322	GT:DS:GP	1|0:1.086:0.216,0.483,0.302	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.079:0.923,0.074,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.963,0.037,0.001	0|1:0.641:0.398,0.564,0.039	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.31:0.713,0.264,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.832:0.342,0.484,0.174	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.832:0.342,0.484,0.174	0|0:0.014:0.986,0.014,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.812:0.359,0.469,0.172	1|0:0.863:0.323,0.49,0.187	1|0:0.878:0.316,0.49,0.194	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.498:0.575,0.353,0.072	0|0:0:1,0,0	0|1:0.876:0.277,0.57,0.153	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.061:0.217,0.504,0.279	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.174:0.172,0.481,0.346	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.341:0.689,0.28,0.03	0|1:1.088:0.214,0.483,0.303	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.04:0.228,0.503,0.268	1|0:0.565:0.518,0.398,0.084	1|1:2:0,0,1	1|1:1.182:0.17,0.479,0.351	1|0:1.172:0.19,0.449,0.361	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.122:0.202,0.473,0.325	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.74:0.358,0.544,0.098	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.908:0.001,0.089,0.91	1|1:1.965:0.001,0.034,0.965	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.18:0.168,0.485,0.348	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.933:0.002,0.062,0.935	1|1:2:0,0,1	0|0:0.046:0.957,0.04,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.119:0.195,0.491,0.314	0|1:0.886:0.311,0.491,0.197	1|1:1.156:0.182,0.481,0.337	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.856:0.328,0.489,0.184	1|0:0.856:0.328,0.489,0.184	1|1:2:0,0,1	1|1:1.283:0.133,0.452,0.416	0|0:0.245:0.773,0.208,0.019	0|1:1.042:0.231,0.497,0.273	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.856:0.328,0.489,0.184	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.797:0.365,0.474,0.162	1|0:0.848:0.332,0.488,0.18	0|1:0.855:0.328,0.489,0.183	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.908:0.003,0.086,0.911	1|1:1.299:0.117,0.467,0.416	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.021:0.242,0.496,0.262	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.815:0.35,0.484,0.165	1|0:0.856:0.328,0.489,0.184	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.708:0.012,0.267,0.721	1|1:1.11:0.199,0.492,0.309	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.854:0.328,0.489,0.183	1|1:1.198:0.161,0.48,0.359	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.189:0.166,0.479,0.355	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.132:0.19,0.488,0.322	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.317:0.709,0.266,0.026	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.863:0.003,0.131,0.866	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.106:0.25,0.393,0.357	0|0:0:1,0,0	0|0:0:1,0,0
+3	17879911	SNP-3.17878692.	C	A	.	PASS	AR2=0.993;DR2=0.994;AF=0.294	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.903:0.001,0.095,0.904	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.951,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.05,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.734:0.017,0.233,0.75	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.925:0,0.075,0.925	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.972:0,0.028,0.972	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.952:0,0.047,0.953	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.838:0.012,0.137,0.85	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.05,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.931:0,0.069,0.931	0|0:0.052:0.95,0.049,0.001	0|0:0.047:0.954,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.952,0.047,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.764:0.014,0.209,0.777	0|0:0:1,0,0
+3	17879955	SNP-3.17878736.	A	G	.	PASS	AR2=0.941;DR2=0.958;AF=0.489	GT:DS:GP	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.626:0.472,0.429,0.099	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.513:0.551,0.384,0.065	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.757:0.384,0.476,0.14	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.821:0.336,0.506,0.158	1|1:2:0,0,1	1|1:1.942:0.002,0.054,0.944	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.883:0.005,0.106,0.889	1|1:1.809:0.012,0.167,0.821	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.626:0.037,0.3,0.663	1|1:2:0,0,1	1|1:1.637:0.033,0.297,0.67	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.85:0.02,0.11,0.87	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.832:0.351,0.466,0.183	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0.056:0.946,0.052,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.806:0.015,0.163,0.821	1|1:1.918:0.003,0.075,0.922	1|1:2:0,0,1	1|1:1.89:0.004,0.103,0.893	1|1:1.567:0.05,0.333,0.617	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.697:0.03,0.243,0.727	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.512:0.552,0.384,0.064	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.325:0.696,0.283,0.021	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.09:0.201,0.507,0.291	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	0|1:1.357:0.107,0.43,0.463	1|1:2:0,0,1	1|1:1.452:0.069,0.409,0.521	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.545:0.053,0.35,0.597	1|0:1:0,1,0	1|1:1.618:0.037,0.309,0.654	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.46:0.076,0.387,0.537	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.603:0.489,0.419,0.092	1|1:1.762:0.022,0.194,0.784	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.793:0.011,0.185,0.804	1|1:2:0,0,1	1|1:1.893:0.005,0.097,0.898	1|1:2:0,0,1	0|0:0.575:0.51,0.406,0.085	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:1.722:0.002,0.274,0.724	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.78:0.013,0.194,0.793	1|1:1.74:0.018,0.224,0.758	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17880337	SNP-3.17879118.	C	A	.	PASS	AR2=1;DR2=1;AF=0.309	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17881301	SNP-3.17880082.	C	A	.	PASS	AR2=0.998;DR2=0.999;AF=0.312	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.409:0.591,0.409,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17881763	SNP-3.17880544.	A	G	.	PASS	AR2=1;DR2=1;AF=0.247	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17882403	SNP-3.17881184.	C	A	.	PASS	AR2=1;DR2=1;AF=0.309	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17882842	SNP-3.17881623.	C	A	.	PASS	AR2=1;DR2=1;AF=0.315	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17891933	SNP-3.17890714.	C	A	.	PASS	AR2=1;DR2=1;AF=0.325	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17896140	SNP-3.17894921.	C	A	.	PASS	AR2=0.971;DR2=0.977;AF=0.251	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.399:0.037,0.526,0.436	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1.161:0.156,0.528,0.317	1|1:2:0,0,1	1|1:1.309:0.106,0.48,0.414	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.235:0.174,0.417,0.409	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.445:0.062,0.431,0.507	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.803:0.01,0.176,0.814	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.773:0.014,0.199,0.787	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.435:0.06,0.445,0.495	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.899:0.312,0.476,0.212	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.759:0.013,0.215,0.772	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.867:0.004,0.124,0.871	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.869:0.005,0.122,0.873	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	17896605	SNP-3.17895386.	A	G	.	PASS	AR2=0.988;DR2=0.99;AF=0.423	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.711:0.289,0.711,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.749:0.016,0.219,0.765	1|1:1.856:0.006,0.133,0.862	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.027,0.973	1|1:2:0,0,1	1|1:1.963:0.001,0.036,0.963	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.937:0.001,0.06,0.939	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.884:0.005,0.106,0.889	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.925:0.002,0.071,0.927	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.891:0.006,0.097,0.897	0|0:0:1,0,0	1|1:1.893:0.005,0.098,0.898	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.761:0.015,0.209,0.776	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1.209:0.12,0.551,0.329	1|1:1.981:0,0.018,0.981	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.815:0.008,0.169,0.823	1|1:2:0,0,1	1|1:1.72:0.02,0.239,0.741	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.183:0.817,0.183,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17899309	SNP-3.17898090.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.351	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.101:0.902,0.096,0.003	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.104:0.899,0.098,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.086:0.917,0.081,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.955,0.045,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.196:0.815,0.174,0.011	1|1:1.873:0.003,0.122,0.875	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.073:0.929,0.07,0.001	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.138:0.867,0.128,0.005	0|0:0.115:0.888,0.109,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.922,0.077,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.844:0.005,0.146,0.849	0|0:0:1,0,0
+3	17900103	SNP-3.17898884.	A	G	.	PASS	AR2=0.849;DR2=0.895;AF=0.315	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.498:0.502,0.498,0	0|1:1.472:0.07,0.388,0.542	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.34:0.103,0.453,0.443	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.525:0.058,0.359,0.583	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.133:0.16,0.546,0.293	1|1:1.465:0.072,0.39,0.537	1|1:1.389:0.094,0.423,0.483	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.313:0.123,0.441,0.436	1|1:2:0,0,1	1|1:1.334:0.111,0.443,0.445	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.283:0.128,0.462,0.41	1|1:2:0,0,1	1|1:1.34:0.114,0.433,0.454	1|0:1.33:0.113,0.445,0.443	0|1:1.275:0.132,0.461,0.407	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.351:0.106,0.436,0.457	1|0:1.339:0.11,0.441,0.449	1|0:1.313:0.118,0.45,0.432	1|0:1.14:0.185,0.489,0.326	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.339:0.11,0.441,0.449	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.088:0.913,0.085,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.703:0.329,0.639,0.032	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.312:0.688,0.312,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.328:0.111,0.45,0.439	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.341:0.109,0.441,0.45	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.244:0.145,0.465,0.389	1|0:1.395:0.093,0.419,0.488	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.496:0.063,0.379,0.558	0|0:0:1,0,0	1|1:1.322:0.145,0.388,0.467	0|0:0:1,0,0	0|1:1.335:0.111,0.443,0.446	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.298:0.123,0.456,0.421	1|1:1.481:0.067,0.384,0.549	1|1:1.339:0.11,0.441,0.449	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.503:0.062,0.373,0.565	1|1:2:0,0,1	1|1:1.274:0.118,0.491,0.391	1|1:1.496:0.063,0.379,0.558	1|1:1.511:0.058,0.373,0.569	1|0:1.097:0.161,0.581,0.258	0|0:1.064:0.171,0.595,0.234	1|1:1.496:0.063,0.379,0.558	1|1:1.34:0.11,0.441,0.449	0|0:0:1,0,0	1|0:0.481:0.519,0.481,0	0|0:0:1,0,0	1|1:1.33:0.112,0.446,0.442	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.496:0.063,0.379,0.558	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.369:0.101,0.429,0.47	0|0:0:1,0,0	1|0:1.288:0.127,0.458,0.415	1|0:1.357:0.104,0.435,0.461	1|1:1.257:0.14,0.463,0.397	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.326:0.112,0.449,0.438	1|1:1.255:0.138,0.468,0.394	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.515:0.06,0.366,0.574	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.339:0.11,0.441,0.449	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.34:0.11,0.441,0.449	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17900223	SNP-3.17899004.	A	G	.	PASS	AR2=1;DR2=1;AF=0.202	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.062:0.938,0.062,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	17900413	SNP-3.17899194.	C	A	.	PASS	AR2=0.935;DR2=0.957;AF=0.468	GT:DS:GP	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.448:0.604,0.344,0.052	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.639:0.041,0.279,0.68	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.514:0.553,0.38,0.067	0|0:0.385:0.644,0.326,0.029	0|0:0:1,0,0	0|0:0.096:0.915,0.073,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:0.564:0.517,0.403,0.08	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.462:0.59,0.357,0.052	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.452:0.602,0.344,0.054	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.533:0.538,0.391,0.071	0|0:0.095:0.907,0.091,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0.674:0.405,0.515,0.079	0|0:0:1,0,0	0|0:0.502:0.566,0.365,0.068	0|0:0.666:0.449,0.436,0.115	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.23:0.781,0.207,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:0.551:0.527,0.396,0.077	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.37:0.666,0.298,0.036	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.253:0.767,0.213,0.02	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0.567:0.522,0.39,0.088	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.55:0.521,0.409,0.071	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.517:0.55,0.382,0.068	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.49:0.589,0.332,0.079	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.554:0.523,0.4,0.077	0|0:0.489:0.571,0.37,0.059	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.369:0.666,0.298,0.036	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.039:0.963,0.035,0.002	0|0:0.504:0.56,0.375,0.065	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0
+3	17902941	SNP-3.17901722.	C	A	.	PASS	AR2=1;DR2=1;AF=0.315	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17905010	SNP-3.17903791.	C	A	.	PASS	AR2=1;DR2=1;AF=0.3	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17905238	SNP-3.17904019.	C	A	.	PASS	AR2=0.983;DR2=0.984;AF=0.334	GT:DS:GP	0|0:0.004:0.996,0.004,0	0|0:0.029:0.972,0.027,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.086:0.915,0.083,0.002	0|0:0:1,0,0	0|0:0.092:0.91,0.088,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.099:0.901,0.098,0.001	0|0:0.126:0.878,0.118,0.004	0|0:0:1,0,0	0|0:0.099:0.904,0.094,0.002	0|0:0.11:0.893,0.103,0.003	1|1:2:0,0,1	0|0:0.109:0.894,0.102,0.003	0|0:0.067:0.936,0.061,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.096:0.906,0.093,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.108:0.895,0.102,0.003	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.111:0.892,0.104,0.003	0|0:0.086:0.915,0.083,0.002	0|0:0.107:0.896,0.101,0.003	0|0:0.087:0.915,0.084,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.1:0.905,0.091,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.94,0.06,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.083:0.919,0.08,0.001	0|0:0.004:0.996,0.004,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0.078:0.923,0.077,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0.187:0.815,0.183,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.055:0.945,0.055,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.94,0.059,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.951,0.049,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.942:0,0.058,0.942	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.081:0.919,0.08,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.123:0.877,0.123,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.111:0.893,0.104,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.106:0.897,0.101,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.11:0.893,0.104,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.088:0.914,0.084,0.002	0|0:0.112:0.891,0.106,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	0|0:0.152:0.856,0.137,0.008	0|0:0:1,0,0	0|0:0.027:0.974,0.026,0	0|0:0:1,0,0	0|0:0.2:0.809,0.182,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.057:0.944,0.056,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.11:0.893,0.104,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0.001:0.999,0.001,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.113:0.889,0.109,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17906462	SNP-3.17905243.	C	A	.	PASS	AR2=0.994;DR2=0.994;AF=0.333	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.113:0.891,0.105,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.12:0.882,0.116,0.002	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.11:0.892,0.105,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.106:0.898,0.098,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.086:0.916,0.082,0.002	0|0:0.13:0.875,0.119,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.01:0.014,0.961,0.024	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.922:0.001,0.076,0.923	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.126:0.877,0.121,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.96,0.039,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.175:0.831,0.163,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.967,0.033,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.938:0.001,0.06,0.939	0|0:0:1,0,0
+3	17906573	SNP-3.17905354.	C	A	.	PASS	AR2=0.966;DR2=0.975;AF=0.275	GT:DS:GP	0|0:0.011:0.989,0.011,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.083:0.919,0.079,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.955,0.044,0.001	1|1:2:0,0,1	0|0:0.053:0.948,0.051,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.104:0.899,0.097,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.942,0.058,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.939:0.001,0.06,0.939	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.768:0.245,0.742,0.013	0|0:0:1,0,0	1|0:0.701:0.318,0.663,0.019	1|0:0.789:0.243,0.724,0.032	1|1:2:0,0,1	0|0:0.51:0.501,0.489,0.011	1|0:0.782:0.244,0.731,0.025	1|1:2:0,0,1	1|1:1.876:0.003,0.117,0.879	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.896:0.32,0.464,0.216	1|1:1.941:0,0.059,0.941	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.868:0.001,0.13,0.869	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.466:0.065,0.404,0.531	0|0:0:1,0,0	1|1:1.823:0.006,0.164,0.829	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.804:0.011,0.174,0.815	1|1:1.989:0,0.01,0.989	1|1:1.983:0,0.016,0.984	0|0:0:1,0,0	1|1:1.672:0.026,0.275,0.698	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.929:0.001,0.07,0.929	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.92,0.079,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.419:0.108,0.365,0.527	1|1:1.941:0.001,0.057,0.942	1|1:1.951:0,0.048,0.951	1|1:1.426:0.077,0.42,0.503	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.875:0.001,0.123,0.876	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.975:0,0.024,0.975	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.955:0.002,0.042,0.957	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.622:0.038,0.302,0.66	0|0:0:1,0,0
+3	17907372	SNP-3.17906153.	A	G	.	PASS	AR2=0.9;DR2=0.916;AF=0.471	GT:DS:GP	1|1:2:0,0,1	0|0:0.166:0.836,0.162,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.407:0.043,0.507,0.45	0|0:0:1,0,0	0|1:1.318:0.116,0.449,0.435	0|0:0.12:0.881,0.118,0.001	0|0:0:1,0,0	1|1:1.785:0.002,0.211,0.787	1|0:1.417:0.049,0.484,0.466	0|0:0:1,0,0	1|0:0.867:0.317,0.499,0.184	1|1:2:0,0,1	1|0:0.982:0.259,0.499,0.242	0|0:0:1,0,0	0|1:0.998:0.251,0.499,0.249	1|0:1.4:0.056,0.487,0.456	0|1:1.46:0.012,0.516,0.472	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.944:0.279,0.499,0.223	1|1:0.919:0.291,0.499,0.21	0|0:0:1,0,0	0|1:0.968:0.267,0.498,0.235	0|0:1.259:0.135,0.471,0.394	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.909:0.002,0.087,0.911	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.045:0.225,0.505,0.27	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.852:0.004,0.139,0.856	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.949:0.003,0.045,0.952	1|1:1.155:0.18,0.486,0.334	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.854:0.005,0.137,0.858	1|1:2:0,0,1	0|1:1.104:0.193,0.509,0.297	1|1:1.689:0.015,0.281,0.704	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.93:0.002,0.065,0.932	0|1:1.116:0.174,0.535,0.29	1|0:1.41:0.072,0.446,0.482	1|1:2:0,0,1	1|1:1.912:0.001,0.086,0.913	1|0:1.004:0.243,0.51,0.247	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.18:0.155,0.51,0.335	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.864:0.008,0.121,0.872	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.844:0.166,0.824,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.015:0.236,0.513,0.251	0|1:1.291:0.126,0.457,0.417	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.194:0.823,0.16,0.017	1|1:2:0,0,1	0|1:1.204:0.154,0.488,0.358	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.211:0.145,0.499,0.356	1|1:1.848:0.01,0.132,0.858	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.155:0.175,0.495,0.33	1|1:1.926:0.001,0.072,0.927	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.831:0,0.169,0.831	1|0:1.282:0.061,0.597,0.342	0|1:1.356:0.104,0.436,0.46	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.967:0.268,0.498,0.234	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.958:0.001,0.04,0.959	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.486:0.047,0.42,0.533	1|1:1.813:0.004,0.178,0.818	0|1:1.423:0.005,0.566,0.428	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.398:0.092,0.417,0.49	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.835:0.006,0.153,0.841	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.476:0.046,0.433,0.521	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.03:0.971,0.028,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.957:0.002,0.04,0.959	0|0:1.001:0.251,0.496,0.253	0|0:0:1,0,0	1|1:1.907:0.006,0.08,0.914	1|1:2:0,0,1	0|1:1.186:0.157,0.499,0.344	1|1:2:0,0,1	1|0:1.258:0.139,0.465,0.397	1|1:2:0,0,1	1|1:1.974:0.001,0.025,0.974	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:1.975:0.001,0.024,0.975	0|1:0.977:0.312,0.399,0.289	1|1:1.971:0,0.028,0.972	0|0:0:1,0,0	1|1:1.954:0.001,0.043,0.955	1|1:2:0,0,1	1|0:0.969:0.287,0.457,0.256	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.317:0.121,0.44,0.438	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.482:0.007,0.505,0.489	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.899:0.003,0.096,0.902
+3	17908145	SNP-3.17906926.	C	A	.	PASS	AR2=0.992;DR2=0.994;AF=0.316	GT:DS:GP	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.077:0.925,0.073,0.002	0|0:0.035:0.966,0.034,0	1|1:2:0,0,1	0|0:0.047:0.954,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.965,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.627:0.035,0.304,0.661	0|1:1:0,1,0	1|1:1.582:0.039,0.339,0.621	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.819:0.004,0.173,0.823	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.025:0.976,0.024,0	0|0:0.029:0.971,0.028,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0.064:0.937,0.061,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.069:0.933,0.065,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17909039	SNP-3.17907820.	C	A	.	PASS	AR2=0.995;DR2=0.995;AF=0.329	GT:DS:GP	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.989:0,0.011,0.989	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.94,0.059,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.07:0.931,0.067,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.933,0.065,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.932,0.066,0.001	0|0:0:1,0,0	0|0:0.043:0.958,0.042,0.001	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.965,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.202:0.801,0.195,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.933,0.066,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.931,0.068,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.09:0.912,0.086,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.081:0.921,0.077,0.002	0|0:0.036:0.964,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.962,0.038,0.001	1|1:2:0,0,1	0|0:0.064:0.937,0.062,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.947,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17909506	SNP-3.17908287.	C	A	.	PASS	AR2=0.973;DR2=0.979;AF=0.371	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.192:0.818,0.173,0.009	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.391:0.644,0.322,0.035	0|0:0:1,0,0	0|0:0.197:0.812,0.178,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.308:0.701,0.29,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.353:0.678,0.291,0.031	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.216:0.8,0.184,0.016	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.262:0.756,0.227,0.017	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.323:0.696,0.284,0.019	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.793:0.254,0.698,0.047	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.322:0.704,0.269,0.027	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.208:0.801,0.189,0.01	0|0:0:1,0,0	0|0:0.252:0.764,0.219,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.228:0.785,0.202,0.013	0|0:0.055:0.946,0.053,0.001	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.33:0.696,0.278,0.026	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.132:0.871,0.125,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.253:0.765,0.217,0.018	0|1:1:0,1,0	0|0:0.272:0.746,0.236,0.018	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.158:0.844,0.154,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0.234:0.784,0.198,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.059:0.014,0.913,0.073	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17909598	SNP-3.17908379.	A	G	.	PASS	AR2=0.939;DR2=0.953;AF=0.442	GT:DS:GP	1|1:2:0,0,1	0|0:0.085:0.916,0.083,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.724:0.408,0.461,0.132	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:0.897:0.297,0.509,0.194	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.63:0.462,0.447,0.091	0|0:0.032:0.968,0.032,0	0|1:1:0,1,0	0|0:0.128:0.874,0.123,0.002	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.854:0.004,0.139,0.858	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.355:0.071,0.503,0.426	1|1:1.573:0.063,0.302,0.635	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.504:0.085,0.326,0.589	1|1:1.58:0.059,0.302,0.639	1|1:2:0,0,1	0|1:1.15:0.182,0.487,0.331	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.963:0,0.037,0.963	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1.324:0.034,0.607,0.358	1|1:2:0,0,1	1|1:1.715:0.012,0.262,0.726	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.825:0.015,0.145,0.84	1|1:1.561:0.066,0.307,0.627	1|1:1.916:0.002,0.079,0.919	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.538:0.524,0.414,0.062	0|0:0:1,0,0	0|0:0.698:0.425,0.451,0.123	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.948:0.001,0.051,0.949	1|1:1.607:0.052,0.289,0.659	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.836:0.34,0.484,0.176	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.167:0.175,0.482,0.342	0|0:0:1,0,0	1|0:1.148:0.182,0.487,0.33	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.072:0.214,0.499,0.286	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.496:0.063,0.378,0.559	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|0:1.127:0.191,0.492,0.317	1|1:2:0,0,1	0|0:0.085:0.915,0.084,0	0|0:0.034:0.967,0.033,0.001	1|1:1.983:0,0.017,0.983	0|0:0.079:0.924,0.072,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.438:0.578,0.406,0.016	1|0:1:0,1,0	1|0:0.571:0.512,0.406,0.083	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.881:0.008,0.103,0.889	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.912:0.298,0.492,0.21	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.717:0.021,0.241,0.738	0|0:0:1,0,0	1|1:2:0,0,1
+3	17909991	SNP-3.17908772.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.325	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.101:0.902,0.096,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.941,0.058,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.739:0.275,0.711,0.014	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17910209	SNP-3.17908990.	C	A	.	PASS	AR2=0.925;DR2=0.949;AF=0.446	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.379:0.64,0.342,0.018	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.66:0.449,0.442,0.109	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.351:0.66,0.33,0.01	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.635:0.466,0.433,0.101	1|0:0.616:0.48,0.425,0.095	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.371:0.644,0.342,0.015	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.386:0.639,0.336,0.025	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.423:0.623,0.33,0.047	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.415:0.634,0.317,0.049	1|0:1:0,1,0	0|0:0.193:0.816,0.174,0.009	1|0:1:0,1,0	0|0:0.205:0.805,0.184,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.248:0.767,0.217,0.015	0|0:0:1,0,0	0|1:0.42:0.625,0.331,0.044	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.407:0.628,0.337,0.035	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.466:0.588,0.358,0.054	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.558:0.52,0.402,0.078	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.203:0.815,0.167,0.018	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.204:0.808,0.18,0.012	0|0:0.644:0.46,0.436,0.104	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.283:0.737,0.243,0.02	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.368:0.661,0.309,0.03	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.396:0.644,0.316,0.04	0|0:0.653:0.472,0.403,0.125	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.628:0.471,0.43,0.099	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.643:0.46,0.436,0.104	0|0:0:1,0,0	0|0:0.085:0.918,0.08,0.002	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0.473:0.583,0.361,0.056	0|0:0.358:0.676,0.29,0.034	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.322:0.704,0.27,0.026	0|0:0:1,0,0	0|0:0.226:0.787,0.2,0.013	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.287:0.734,0.246,0.02	0|0:0.283:0.738,0.24,0.021	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.379:0.668,0.285,0.047	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.372:0.663,0.303,0.035	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.421:0.624,0.331,0.045	1|1:2:0,0,1	0|0:0.345:0.687,0.281,0.032	1|1:2:0,0,1	0|0:0:1,0,0
+3	17910760	SNP-3.17909541.	A	G	.	PASS	AR2=0.998;DR2=0.999;AF=0.297	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.634:0,0.366,0.634	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17911107	SNP-3.17909888.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.405	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.2:0.81,0.179,0.01	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0.167:0.841,0.151,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.067:0.934,0.065,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.114:0.89,0.107,0.004	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.068:0.933,0.065,0.002	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.095:0.908,0.09,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.379:0.638,0.344,0.017	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.149:0.858,0.135,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17912986	SNP-3.17911767.	A	G	.	PASS	AR2=0.981;DR2=0.984;AF=0.399	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.505:0.516,0.464,0.02	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:0.959:0.273,0.494,0.233	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:0.943:0.282,0.493,0.225	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.331:0.004,0.661,0.335	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.505:0.554,0.388,0.059	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.959:0.273,0.494,0.233	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.956:0.275,0.494,0.231	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.876:0,0.124,0.876	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17914329	SNP-3.17913110.	C	A	.	PASS	AR2=1;DR2=1;AF=0.335	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17914983	SNP-3.17913764.	A	G	.	PASS	AR2=0.974;DR2=0.976;AF=0.489	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:0.764:0.383,0.469,0.147	1|1:2:0,0,1	1|0:1.01:0.252,0.486,0.262	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.903:0.002,0.094,0.904	0|0:0.764:0.383,0.47,0.147	0|0:0:1,0,0	1|1:1.258:0.102,0.539,0.36	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.924:0.002,0.072,0.926	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.018:0.045,0.892,0.063	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.887:0.304,0.505,0.191	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:0.748:0.393,0.466,0.141	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.943:0,0.056,0.944	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.771:0.378,0.473,0.149	1|0:0.963:0.254,0.529,0.217	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.725:0.408,0.458,0.134	0|0:0:1,0,0	1|0:0.857:0.325,0.492,0.182	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.917:0,0.083,0.917	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17918451	SNP-3.17917232.	A	G	.	PASS	AR2=0.995;DR2=0.995;AF=0.271	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.921,0.077,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.099:0.903,0.094,0.002	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.776:0.011,0.202,0.787	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.055:0.945,0.055,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.957,0.043,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.195:0.814,0.177,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.116:0.887,0.109,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.102:0.901,0.096,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17920626	SNP-3.17919407.	C	A	.	PASS	AR2=0.977;DR2=0.983;AF=0.297	GT:DS:GP	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.502:0.04,0.418,0.542	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.695:0.022,0.262,0.716	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.666:0.024,0.285,0.69	1|1:2:0,0,1	1|1:1.539:0.05,0.361,0.589	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.856:0.007,0.131,0.863	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.853:0.008,0.131,0.861	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.442:0.059,0.439,0.501	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.791:0.006,0.196,0.797	1|1:2:0,0,1	1|1:1.711:0.016,0.256,0.727	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.983:0,0.017,0.983	1|1:2:0,0,1	1|1:1.921:0.002,0.074,0.923	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.633:0.004,0.359,0.637	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.913:0.001,0.086,0.914	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.954:0.001,0.044,0.955	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.707:0,0.292,0.707	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.321:0.088,0.503,0.409	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17925657	SNP-3.17924438.	C	A	.	PASS	AR2=0.99;DR2=0.992;AF=0.348	GT:DS:GP	0|0:0.089:0.911,0.089,0	1|1:2:0,0,1	0|0:0.024:0.976,0.024,0	1|1:2:0,0,1	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.106:0.897,0.101,0.002	1|1:2:0,0,1	0|0:0.108:0.897,0.098,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.285:0.718,0.28,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.013:0.987,0.013,0	0|0:0.007:0.993,0.007,0	1|0:0.502:0.516,0.465,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.085:0.915,0.085,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.208:0.803,0.185,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.026,0.974	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:1.973:0,0.026,0.974	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.963,0.037,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0.064:0.936,0.063,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0.139:0.862,0.137,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0.073:0.932,0.063,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0.22:0.794,0.192,0.014	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17926056	SNP-3.17924837.	C	A	.	PASS	AR2=0.979;DR2=0.985;AF=0.408	GT:DS:GP	0|0:0.019:0.981,0.019,0	1|1:2:0,0,1	0|0:0.028:0.973,0.027,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.025:0.241,0.493,0.266	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.085:0.915,0.084,0.001	0|0:0.029:0.972,0.028,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.411:0.61,0.369,0.021	1|1:2:0,0,1	0|0:0.369:0.647,0.337,0.016	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0.051:0.95,0.05,0.001	0|0:0.368:0.656,0.321,0.023	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0.02:0.98,0.02,0	1|1:1.448:0.072,0.409,0.519	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.02:0.98,0.02,0	0|0:0.256:0.749,0.247,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.957,0.043,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.221:0.779,0.22,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.361:0.639,0.361,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.02:0.98,0.02,0	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.963,0.037,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.047:0.953,0.046,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.94,0.059,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.019:0.981,0.019,0	0|0:0.055:0.946,0.054,0.001	0|0:0.116:0.885,0.113,0.001	0|0:0.032:0.969,0.031,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.601:0.506,0.388,0.107	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.928,0.071,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17933050	SNP-3.17931831.	C	A	.	PASS	AR2=0.968;DR2=0.977;AF=0.31	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.776:0.015,0.195,0.791	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.11:0.894,0.101,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.121:0.882,0.115,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.379:0.083,0.455,0.462	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:1.659:0.024,0.293,0.683	1|0:1.615:0.01,0.365,0.625	1|1:2:0,0,1	1|1:1.44:0.078,0.405,0.518	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.752:0.013,0.222,0.765	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.011,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.135:0.2,0.465,0.335	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.598:0.011,0.38,0.609	1|1:2:0,0,1	1|1:1.894:0.001,0.105,0.895	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.939:0,0.061,0.939	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.796:0.009,0.186,0.805	1|1:1.914:0.002,0.082,0.916	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.94:0.001,0.057,0.942	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.416:0.063,0.458,0.479	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.409:0.08,0.431,0.489	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.038:0.962,0.037,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.948,0.051,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.78:0.015,0.19,0.795	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.923:0.001,0.074,0.924	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	1|1:1.802:0.012,0.173,0.815	0|0:0:1,0,0
+3	17934255	SNP-3.17933036.	C	A	.	PASS	AR2=1;DR2=1;AF=0.337	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17936247	SNP-3.17935028ag.	C	A	.	PASS	AR2=0.982;DR2=0.988;AF=0.301	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.522:0.049,0.38,0.571	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.619:0.018,0.345,0.637	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.979:0,0.021,0.979	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.879:0.004,0.114,0.883	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.519:0.043,0.395,0.562	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1.523:0.031,0.416,0.554	1|1:1.461:0.043,0.454,0.503	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.759:0.016,0.209,0.775	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.873:0.007,0.114,0.879	1|1:1.954:0,0.046,0.954	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.68:0.025,0.269,0.705	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.94:0.002,0.057,0.942	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17936587	SNP-3.17935368.	C	A	.	PASS	AR2=0.967;DR2=0.973;AF=0.392	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.144:0.86,0.135,0.004	0|0:0.022:0.978,0.021,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.248:0.762,0.229,0.01	0|0:0.464:0.594,0.348,0.058	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.134:0.87,0.126,0.004	0|0:0.11:0.894,0.102,0.004	0|0:0.219:0.791,0.199,0.01	0|0:0.291:0.731,0.246,0.022	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.339:0.693,0.276,0.032	0|0:0:1,0,0	0|0:0.072:0.929,0.07,0.001	0|0:0:1,0,0	0|0:0.148:0.857,0.138,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.072:0.928,0.072,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.015,0	0|0:0.243:0.771,0.214,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.091:0.913,0.084,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.278:0.742,0.239,0.019	0|0:0:1,0,0	0|0:0.078:0.923,0.076,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.13:0.871,0.128,0.001	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0.346:0.685,0.285,0.031	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.979:0,0.021,0.979	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.278:0.742,0.239,0.019	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.132:0.868,0.131,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.067:0.933,0.067,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.278:0.742,0.239,0.019	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.188:0.831,0.15,0.019	0|0:0.182:0.827,0.163,0.009	1|0:1:0,1,0	0|0:0.195:0.813,0.178,0.009	0|0:0.173:0.832,0.162,0.005	0|0:0:1,0,0	0|0:0.3:0.723,0.255,0.023	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.03:0.97,0.03,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.179:0.827,0.167,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.211:0.802,0.186,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.064:0.936,0.063,0.001	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.132:0.872,0.123,0.004	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.206:0.815,0.165,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.278:0.742,0.239,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.01:0.99,0.01,0	0|0:0.265:0.753,0.23,0.017	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17936998	SNP-3.17935779.	C	A	.	PASS	AR2=0.991;DR2=0.993;AF=0.293	GT:DS:GP	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.739:0.018,0.224,0.757	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.755:0.363,0.519,0.118	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.447:0.081,0.391,0.528	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.956:0,0.044,0.956	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.978:0.001,0.021,0.978	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.769:0.013,0.204,0.782	0|0:0:1,0,0
+3	17937439	SNP-3.17936220.	A	G	.	PASS	AR2=0.985;DR2=0.989;AF=0.264	GT:DS:GP	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.965,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0.029:0.972,0.028,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.495:0.078,0.349,0.573	0|0:0.025:0.975,0.025,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.78:0.377,0.467,0.157	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.028,0.972	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.953:0.001,0.045,0.954	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.991:0.119,0.772,0.11	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	1|1:1.347:0.138,0.378,0.484	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17937570	SNP-3.17936351.	C	A	.	PASS	AR2=0.991;DR2=0.993;AF=0.366	GT:DS:GP	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.945:0.001,0.054,0.945	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.084:0.919,0.078,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.365:0.675,0.286,0.039	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.934:0.001,0.065,0.934	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.931:0.001,0.067,0.932	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.934:0.001,0.063,0.935	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.935:0.002,0.061,0.937	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.128:0.878,0.116,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.2:0.807,0.187,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:0.392:0.628,0.352,0.02	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.166:0.841,0.153,0.006	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.939,0.06,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.021,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17937691	SNP-3.17936472.	C	A	.	PASS	AR2=0.945;DR2=0.956;AF=0.337	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.612:0.039,0.311,0.651	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.268:0.75,0.231,0.019	0|0:0:1,0,0	0|0:0.357:0.671,0.301,0.028	0|0:0.244:0.776,0.205,0.02	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.202:0.809,0.179,0.012	0|0:0:1,0,0	0|0:0.246:0.77,0.215,0.016	0|0:0.207:0.803,0.186,0.01	0|0:0:1,0,0	0|0:0.139:0.868,0.124,0.007	0|0:0:1,0,0	0|1:1.153:0.196,0.455,0.349	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.255:0.761,0.222,0.016	0|0:0.191:0.818,0.174,0.008	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.254:0.761,0.224,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.257:0.759,0.224,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.104:0.902,0.092,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.25:0.766,0.218,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.642:0.031,0.296,0.673	1|1:2:0,0,1	1|1:1.791:0.011,0.188,0.801	1|1:1.858:0.004,0.134,0.862	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.799:0.01,0.18,0.809	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.826:0.008,0.158,0.834	1|1:1.779:0.018,0.184,0.798	1|1:1.819:0.009,0.163,0.828	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.817:0.007,0.168,0.824	1|1:1.789:0.006,0.198,0.796	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1.691:0.022,0.264,0.714	1|1:1.836:0.009,0.146,0.845	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.728:0.012,0.249,0.74	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.394:0.109,0.389,0.502	1|1:1.865:0.005,0.126,0.869	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.878:0.004,0.115,0.882	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.502:0.577,0.344,0.079	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.254:0.763,0.221,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.162:0.843,0.152,0.005	0|0:0:1,0,0	0|0:0.276:0.742,0.24,0.018	0|0:0.223:0.789,0.2,0.011	0|0:0.313:0.709,0.268,0.022	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.219:0.793,0.195,0.012	0|0:0.258:0.758,0.225,0.017	0|0:0.239:0.779,0.202,0.018	0|0:0:1,0,0	0|0:0.25:0.765,0.22,0.015	0|0:0.14:0.865,0.129,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.149:0.854,0.143,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.952:0.001,0.045,0.954	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17938830	SNP-3.17937611.	C	A	.	PASS	AR2=0.986;DR2=0.988;AF=0.37	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.944,0.055,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.297:0.725,0.252,0.023	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.947,0.053,0.001	0|0:0:1,0,0	0|0:0.049:0.951,0.048,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.944,0.055,0.001	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0.059:0.941,0.058,0.001	0|0:0.05:0.951,0.049,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.94,0.059,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.944,0.055,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.082:0.92,0.077,0.002	0|0:0:1,0,0	0|0:0.214:0.798,0.191,0.012	0|0:0.214:0.798,0.191,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.214:0.798,0.191,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.946,0.053,0.001	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.312:0.693,0.301,0.005	0|0:0:1,0,0	0|0:0.081:0.92,0.079,0.001	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.104:0.898,0.101,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.083:0.918,0.08,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.104:0.9,0.097,0.003	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.963,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.186:0.826,0.162,0.012	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.952,0.047,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0.061:0.941,0.058,0.001	0|0:0:1,0,0	0|0:0.05:0.951,0.047,0.002	0|0:0.041:0.959,0.04,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.074:0.93,0.065,0.004	0|0:0:1,0,0	0|0:0.052:0.949,0.05,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.964,0.036,0	0|0:0.035:0.965,0.034,0	0|0:0.078:0.925,0.073,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.095:0.908,0.09,0.003	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17939626	SNP-3.17938407.	A	G	.	PASS	AR2=0.974;DR2=0.98;AF=0.34	GT:DS:GP	1|1:1.811:0.001,0.188,0.812	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.963:0,0.037,0.963	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.258:0.107,0.529,0.365	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.52:0.584,0.313,0.104	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.15:0.105,0.64,0.255	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.794:0.001,0.204,0.795	1|1:1.902:0.001,0.096,0.903	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:1.908:0.002,0.088,0.91	1|1:1.981:0,0.019,0.981	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.961:0,0.039,0.961	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.979:0,0.021,0.979	1|1:2:0,0,1	1|1:1.681:0.002,0.315,0.683	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.898:0.006,0.091,0.904	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.705:0.023,0.249,0.728	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.831:0.007,0.156,0.837	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.922:0,0.078,0.922	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.892:0.006,0.097,0.898	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.01:0.23,0.531,0.239	1|1:1.176:0.243,0.339,0.419	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.97:0,0.029,0.97	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.989:0,0.01,0.989	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.743:0.004,0.248,0.748	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.919:0.001,0.078,0.92	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.911:0,0.088,0.911	1|1:1.985:0,0.015,0.985	1|1:1.895:0.001,0.103,0.896	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.966:0,0.034,0.966	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.89:0.004,0.101,0.895	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.941:0.004,0.051,0.945	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17940982	SNP-3.17939763.	A	G	.	PASS	AR2=0.996;DR2=0.997;AF=0.256	GT:DS:GP	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.389:0.644,0.323,0.033	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.231:0.801,0.166,0.033	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17944076	SNP-3.17942857.	C	A	.	PASS	AR2=0.923;DR2=0.943;AF=0.269	GT:DS:GP	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.309:0.12,0.451,0.429	1|1:1.174:0.169,0.488,0.343	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.034:0.966,0.034,0	0|0:0.11:0.892,0.105,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.29:0.061,0.588,0.351	1|1:1.94:0.002,0.056,0.942	0|1:1.412:0.084,0.421,0.495	1|1:1.855:0.002,0.141,0.857	1|1:1.235:0.152,0.461,0.387	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.243:0.132,0.494,0.374	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.851:0.008,0.132,0.859	1|1:1.922:0.003,0.071,0.926	1|1:1.806:0.002,0.189,0.809	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.196:0.162,0.48,0.358	1|1:1.554:0.022,0.403,0.575	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.554:0.015,0.417,0.569	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.536:0.065,0.334,0.601	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.214:0.155,0.476,0.369	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.496:0.06,0.385,0.556	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.414:0.076,0.433,0.491	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.811:0.012,0.165,0.823	1|1:1.956:0.001,0.042,0.957	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.193:0.816,0.174,0.01	0|1:1.214:0.152,0.483,0.365	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0.194:0.815,0.176,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.963,0.037,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.672:0.027,0.274,0.699	1|1:2:0,0,1	1|0:1.377:0.104,0.415,0.481	1|0:1.405:0.054,0.488,0.459	0|0:0:1,0,0	1|1:1.405:0.096,0.402,0.502	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.934:0.002,0.062,0.936	1|1:2:0,0,1	1|1:1.538:0.059,0.343,0.597	1|1:1.405:0.108,0.379,0.513	1|1:2:0,0,1	1|1:1.57:0.008,0.414,0.578	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.853:0.002,0.143,0.855	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.228:0.137,0.498,0.365	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17944679	SNP-3.17943460.	C	A	.	PASS	AR2=0.981;DR2=0.987;AF=0.303	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.025:0.976,0.024,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.839:0.009,0.143,0.848	1|1:1.556:0.062,0.32,0.618	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.408:0.635,0.322,0.043	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.495:0.061,0.382,0.557	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.686:0.01,0.294,0.696	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.592:0.042,0.324,0.634	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	1|1:1.664:0.026,0.283,0.691	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.689:0.017,0.277,0.706	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.677:0.023,0.277,0.7	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17945505	SNP-3.17944286.	A	G	.	PASS	AR2=0.825;DR2=0.87;AF=0.225	GT:DS:GP	0|0:0.471:0.573,0.382,0.044	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.605:0.489,0.418,0.094	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.789:0.365,0.482,0.153	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.581:0.498,0.423,0.079	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.335:0.667,0.332,0.002	1|1:2:0,0,1	1|0:1:0,1,0	0|1:0.553:0.51,0.427,0.063	0|0:0.533:0.544,0.379,0.077	0|0:0.622:0.46,0.457,0.082	0|0:0.256:0.763,0.219,0.019	0|0:0.242:0.774,0.209,0.016	0|0:0:1,0,0	0|0:0.319:0.705,0.271,0.024	1|1:2:0,0,1	0|0:0.21:0.806,0.178,0.016	0|1:1:0,1,0	0|0:0.378:0.662,0.298,0.04	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.275:0.744,0.236,0.019	0|1:1:0,1,0	0|0:0.003:0.997,0.003,0	0|0:0.355:0.675,0.294,0.03	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.32:0.706,0.268,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.272:0.749,0.23,0.021	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.329:0.699,0.273,0.028	0|0:0.27:0.75,0.229,0.021	0|0:0:1,0,0	0|0:0.725:0.405,0.465,0.13	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.763:0.395,0.448,0.157	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.384:0.097,0.423,0.481	0|0:0:1,0,0	0|1:1.026:0.249,0.477,0.275	0|0:0:1,0,0	0|0:0.459:0.586,0.37,0.045	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.195:0.19,0.424,0.386	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.082:0.21,0.498,0.292	0|0:0.539:0.528,0.406,0.067	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.745:0.394,0.467,0.139	0|1:0.93:0.27,0.53,0.2	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.781:0.379,0.461,0.16	0|0:0:1,0,0	1|0:0.904:0.279,0.539,0.182	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.791:0.366,0.478,0.157	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.772:0.392,0.445,0.163	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.175:0.837,0.151,0.012	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.637:0.464,0.435,0.101	1|0:0.882:0.315,0.489,0.196	1|1:2:0,0,1	0|0:0.279:0.741,0.238,0.021	0|0:0.659:0.45,0.44,0.109	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.272:0.748,0.231,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.616:0.464,0.457,0.079	0|0:0:1,0,0	0|0:0.511:0.575,0.339,0.086	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.289:0.733,0.245,0.022	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.7:0.391,0.519,0.091	0|1:1:0,1,0	0|0:0.307:0.694,0.305,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.676:0.439,0.445,0.116	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.497:0.571,0.361,0.068	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.711:0.417,0.454,0.129	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.288:0.734,0.244,0.022	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.787:0.374,0.464,0.161	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.596:0.495,0.415,0.091	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.269:0.751,0.229,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.417:0.611,0.36,0.028	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.272:0.749,0.23,0.021
+3	17947981	SNP-3.17946762.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.415	GT:DS:GP	1|0:0.844:0.156,0.843,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	0|0:0.014:0.986,0.014,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.052:0.948,0.052,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.061:0.939,0.061,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17948270	SNP-3.17947051.	C	A	.	PASS	AR2=0.997;DR2=0.997;AF=0.377	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.016:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.895:0.346,0.413,0.241	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17948702	SNP-3.17947483.	C	A	.	PASS	AR2=0.986;DR2=0.993;AF=0.364	GT:DS:GP	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.04:0.96,0.039,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:0.65:0.452,0.445,0.103	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.869:0.4,0.331,0.269	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.582:0.504,0.41,0.086	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17952951	SNP-3.17951732.	A	G	.	PASS	AR2=1;DR2=1;AF=0.22	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17953359	SNP-3.17952140.	A	G	.	PASS	AR2=0.996;DR2=0.996;AF=0.355	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.975:0.001,0.024,0.975	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.935,0.064,0.001	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.942,0.058,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	1|1:1.921:0.001,0.077,0.922	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.937:0.001,0.062,0.938	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.979:0,0.021,0.979	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.707:0.005,0.283,0.712	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.044:0.957,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.923:0.003,0.072,0.925	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.958:0,0.041,0.959	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.971:0,0.028,0.972	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17954034	SNP-3.17952815.	A	G	.	PASS	AR2=0.994;DR2=0.995;AF=0.23	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.09:0.054,0.802,0.144	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.935:0.002,0.061,0.937	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.953:0.001,0.045,0.954	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.922:0.001,0.076,0.923	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.961:0.001,0.036,0.962	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.885:0.003,0.109,0.888	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.898:0.003,0.097,0.9	1|1:1.847:0.008,0.138,0.854	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.891:0.12,0.869,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.921:0.002,0.075,0.923	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17956417	SNP-3.17955198.	C	A	.	PASS	AR2=0.993;DR2=0.994;AF=0.33	GT:DS:GP	0|0:0.039:0.961,0.038,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.997:0.229,0.545,0.226	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.968,0.032,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.099:0.903,0.096,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.936:0.001,0.062,0.937	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.092:0.908,0.092,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.911:0.002,0.086,0.912	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.923:0.001,0.074,0.925	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.952:0.001,0.047,0.953	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.938:0.001,0.061,0.938	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.8:0.003,0.194,0.803	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.915:0.001,0.083,0.916	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.907:0.002,0.088,0.91	0|0:0:1,0,0
+3	17958188	SNP-3.17956969.	C	A	.	PASS	AR2=0.917;DR2=0.939;AF=0.408	GT:DS:GP	0|0:0.379:0.659,0.304,0.037	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.143:0.858,0.141,0.001	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.806:0.37,0.454,0.176	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.335:0.67,0.325,0.005	0|0:0.362:0.64,0.358,0.002	0|0:0:1,0,0	0|1:0.69:0.434,0.443,0.123	0|0:0.436:0.61,0.343,0.047	0|0:0:1,0,0	0|0:0.42:0.626,0.329,0.046	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.408:0.637,0.318,0.045	0|0:0.474:0.58,0.365,0.054	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.426:0.623,0.328,0.049	0|0:0.506:0.554,0.386,0.06	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.31:0.717,0.257,0.027	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.324:0.698,0.279,0.022	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.376:0.66,0.304,0.036	0|0:0:1,0,0	0|0:0.311:0.711,0.267,0.022	0|0:0.477:0.579,0.365,0.056	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.461:0.642,0.255,0.103	1|1:2:0,0,1	1|0:0.505:0.553,0.388,0.058	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.495:0.632,0.24,0.128	1|1:2:0,0,1	1|1:1.753:0.021,0.205,0.774	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.534:0.549,0.368,0.083	1|1:2:0,0,1	0|0:0.308:0.721,0.251,0.028	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.301:0.712,0.276,0.013	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.458:0.599,0.344,0.057	0|0:0:1,0,0	1|0:0.546:0.505,0.443,0.051	0|0:0.096:0.907,0.09,0.003	0|0:0.341:0.69,0.279,0.031	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.096:0.907,0.09,0.003	0|0:0.298:0.728,0.247,0.025	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.264:0.755,0.225,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.365:0.669,0.298,0.033	0|0:0:1,0,0	0|0:0.266:0.735,0.264,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.166:0.843,0.149,0.009	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.389:0.65,0.311,0.039	0|0:0.339:0.689,0.283,0.028	0|0:0.391:0.659,0.292,0.05	1|1:2:0,0,1	0|0:0.096:0.907,0.09,0.003	0|0:0.151:0.857,0.136,0.008	0|0:0.295:0.727,0.251,0.022	0|0:0.333:0.697,0.273,0.03	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.096:0.907,0.09,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.532:0.547,0.374,0.079	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.642:0.465,0.428,0.107	0|0:0.248:0.771,0.211,0.018	0|0:0.362:0.671,0.296,0.033	0|0:0.384:0.66,0.295,0.045	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.414:0.606,0.374,0.02	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.375:0.66,0.304,0.036
+3	17963359	SNP-3.17962140.	C	A	.	PASS	AR2=0.988;DR2=0.99;AF=0.316	GT:DS:GP	0|0:0:1,0,0	1|1:1.818:0.007,0.169,0.825	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.846:0.006,0.141,0.853	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0.024:0.976,0.024,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.153:0.856,0.136,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.872:0.004,0.121,0.876	1|1:2:0,0,1	1|1:1.817:0.009,0.165,0.826	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.716:0.044,0.196,0.76	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.869:0.004,0.123,0.873	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.794:0.014,0.179,0.808	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.008:0.993,0.007,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.114:0.887,0.112,0.001	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.839:0.007,0.146,0.846	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.8:0.011,0.178,0.811	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.861:0.005,0.128,0.866	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.027,0.973	1|1:1.913:0,0.086,0.913	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17964765	SNP-3.17963546.	A	G	.	PASS	AR2=0.965;DR2=0.974;AF=0.42	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.135:0.869,0.128,0.004	0|0:0:1,0,0	0|0:0.151:0.854,0.141,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.25:0.77,0.209,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.331:0.706,0.257,0.037	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.945:0,0.054,0.945	1|0:1:0,1,0	0|0:0.758:0.45,0.342,0.208	1|1:1.934:0.005,0.055,0.94	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.737:0.013,0.238,0.749	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.799:0.006,0.189,0.805	1|1:1.851:0.006,0.137,0.857	1|1:2:0,0,1	1|1:1.956:0,0.043,0.957	1|1:1.588:0.059,0.294,0.647	1|1:1.672:0.003,0.322,0.675	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.939:0.001,0.058,0.94	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.618:0.018,0.346,0.636	1|1:2:0,0,1	1|1:1.784:0.012,0.192,0.796	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.696:0.031,0.242,0.727	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.445:0.06,0.435,0.505	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.956,0.043,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.419:0.629,0.324,0.048	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.806:0.007,0.181,0.813	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.188:0.822,0.169,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.165:0.842,0.151,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.921:0.001,0.076,0.923	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.113:0.89,0.107,0.003	0|0:0.193:0.817,0.173,0.01	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.874:0.004,0.119,0.878	1|1:1.956:0,0.044,0.956	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.948:0.001,0.051,0.949	1|1:1.933:0.001,0.066,0.934	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.159:0.847,0.146,0.006	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.959:0.001,0.04,0.96	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.039:0.961,0.039,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.779:0.014,0.193,0.793	1|1:2:0,0,1	1|1:1.865:0.009,0.117,0.874	0|0:0.012:0.988,0.012,0	1|1:2:0,0,1
+3	17966864	SNP-3.17965645.	A	G	.	PASS	AR2=1;DR2=1;AF=0.237	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17966914	SNP-3.17965695.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.338	GT:DS:GP	0|0:0:1,0,0	1|1:1.937:0,0.063,0.937	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.944,0.055,0.001	1|1:2:0,0,1	0|0:0.133:0.868,0.131,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.083:0.918,0.081,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.133:0.876,0.116,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.954:0,0.045,0.955	0|0:0:1,0,0	1|1:1.964:0,0.035,0.965	1|1:1.684:0.029,0.258,0.713	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.965:0.001,0.034,0.966	1|1:1.978:0.001,0.021,0.978	1|1:1.979:0,0.021,0.979	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.978:0,0.021,0.978	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.985:0,0.015,0.985	0|0:0:1,0,0	1|1:1.979:0,0.021,0.979	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.945:0,0.055,0.945	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.972:0.001,0.026,0.973	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.989:0,0.011,0.989	0|0:0:1,0,0
+3	17967272	SNP-3.17966053.	A	G	.	PASS	AR2=0.988;DR2=0.99;AF=0.226	GT:DS:GP	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.784:0.004,0.207,0.789	1|1:1.823:0.01,0.156,0.834	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.911:0.003,0.083,0.914	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:0.847:0.153,0.847,0	1|1:1.643:0.04,0.277,0.683	1|1:1.871:0.008,0.113,0.879	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.756:0.017,0.211,0.772	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.79:0.011,0.188,0.801	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	0|0:0.017:0.983,0.016,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.948:0.001,0.05,0.949	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1
+3	17970951	SNP-3.17969732.	A	G	.	PASS	AR2=1;DR2=1;AF=0.418	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17971628	SNP-3.17970409.	A	G	.	PASS	AR2=0.932;DR2=0.951;AF=0.543	GT:DS:GP	1|1:1.945:0.001,0.053,0.946	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.63:0.125,0.121,0.754	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:0.618:0.478,0.426,0.096	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.382:0.676,0.267,0.057	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	1|0:1.457:0.068,0.407,0.525	1|1:1.89:0.001,0.108,0.891	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.788:0.014,0.185,0.801	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.651:0.031,0.288,0.682	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.72:0.018,0.244,0.738	1|1:2:0,0,1	1|1:1.935:0.002,0.061,0.937	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.795:0.008,0.19,0.802	1|1:2:0,0,1	1|1:1.765:0.007,0.222,0.772	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.834:0.003,0.161,0.837	1|1:2:0,0,1	1|1:1.942:0.001,0.056,0.943	1|1:1.629:0.037,0.297,0.666	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.928:0.002,0.067,0.931	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.425:0.083,0.409,0.508	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.551:0.04,0.368,0.592	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.619:0.042,0.297,0.661	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.425:0.083,0.409,0.508	0|0:0:1,0,0	1|1:1.728:0.018,0.237,0.745	0|0:0:1,0,0	1|1:1.411:0.051,0.487,0.462	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.529:0.536,0.399,0.065	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0.284:0.738,0.24,0.022	1|1:1.981:0,0.019,0.981	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.284:0.738,0.24,0.022	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.92:0.002,0.076,0.922	1|1:1.831:0.008,0.154,0.839	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.652:0.031,0.287,0.682	0|0:0:1,0,0	1|1:1.948:0,0.051,0.948	1|1:2:0,0,1	1|1:1.754:0.015,0.216,0.769	1|1:1.515:0.053,0.379,0.568	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.502:0.067,0.365,0.568	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.532:0.053,0.362,0.585	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.019:0.29,0.401,0.309	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.827:0.008,0.157,0.835	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.284:0.738,0.24,0.022	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.741:0.017,0.226,0.758	1|1:1.662:0.029,0.281,0.69	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.662:0.029,0.281,0.69	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:1.649:0.031,0.289,0.68	1|1:2:0,0,1	1|1:1.425:0.083,0.409,0.508	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.935:0.005,0.055,0.94	1|1:2:0,0,1	1|1:1.927:0.005,0.064,0.932	1|1:2:0,0,1	1|1:1.953:0.001,0.046,0.953	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17972515	SNP-3.17971296.	C	A	.	PASS	AR2=0.961;DR2=0.968;AF=0.264	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.716:0.016,0.253,0.731	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.806:0.354,0.486,0.16	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.309:0.72,0.25,0.029	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.871:0.318,0.493,0.189	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.914:0.002,0.082,0.916	1|1:1.875:0.004,0.118,0.878	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1.191:0.088,0.633,0.279	0|0:0:1,0,0	1|0:1.505:0.042,0.411,0.547	0|1:1.135:0.22,0.424,0.356	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.86:0.004,0.131,0.864	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1.42:0.027,0.526,0.447	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.722:0.323,0.632,0.045	1|0:1:0,1,0	1|0:1.207:0.19,0.412,0.398	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.757:0.015,0.213,0.772	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.237:0.108,0.547,0.345	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.861:0.003,0.132,0.865	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.442:0.087,0.384,0.529	1|1:1.98:0,0.02,0.98	0|0:0.716:0.415,0.454,0.131	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17972810	SNP-3.17971591.	C	A	.	PASS	AR2=0.992;DR2=0.994;AF=0.34	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.031:0.969,0.03,0	0|0:0.038:0.962,0.037,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.062:0.939,0.059,0.001	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.026:0.974,0.026,0	0|0:0.068:0.932,0.067,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.626:0.033,0.309,0.658	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.853:0.005,0.136,0.858	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.918:0.002,0.079,0.919	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.849:0.002,0.147,0.851	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.797:0.011,0.181,0.808	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.013,0	0|0:0.173:0.828,0.171,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.947:0.002,0.05,0.948	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17973107	SNP-3.17971888.	C	A	.	PASS	AR2=0.991;DR2=0.992;AF=0.321	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.827:0.007,0.158,0.835	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.054:0.218,0.51,0.272	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.852:0.007,0.134,0.859	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.781:0.024,0.17,0.805	1|1:1.883:0.001,0.115,0.884	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.962:0,0.037,0.962	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.847:0.001,0.151,0.848	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.687:0.023,0.268,0.709	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.866:0.005,0.125,0.871	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17976158	SNP-3.17974939.	A	G	.	PASS	AR2=0.956;DR2=0.966;AF=0.404	GT:DS:GP	1|1:1.612:0.04,0.309,0.651	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.181:0.825,0.17,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.415:0.627,0.331,0.042	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.279:0.751,0.219,0.03	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.493:0.009,0.488,0.503	1|1:2:0,0,1	0|1:0.985:0.22,0.576,0.205	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.328:0.037,0.598,0.365	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.689:0.028,0.255,0.717	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.641:0.034,0.291,0.675	1|1:2:0,0,1	1|1:1.727:0.02,0.233,0.747	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.961:0.001,0.036,0.963	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.701:0.011,0.277,0.712	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.372:0.669,0.29,0.041	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.15:0.857,0.137,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.796:0.009,0.186,0.805	0|0:0:1,0,0	0|0:0.247:0.771,0.211,0.018	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.296:0.724,0.257,0.02	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.16:0.844,0.153,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.194:0.814,0.178,0.008	0|0:0.248:0.77,0.212,0.018	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.903:0.005,0.087,0.908	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.872:0.002,0.124,0.874	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.278:0.725,0.272,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.404:0.636,0.324,0.04	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.091:0.177,0.556,0.267	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.659:0.025,0.291,0.684	1|1:2:0,0,1	1|1:1.718:0.02,0.241,0.738	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.74:0.015,0.231,0.755	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.445:0.605,0.345,0.05	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:1.97:0.001,0.028,0.971	1|1:1.971:0,0.029,0.971	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.97:0.001,0.029,0.971	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.39:0.062,0.486,0.452	1|1:2:0,0,1	1|1:1.969:0.001,0.03,0.97	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.075:0.266,0.392,0.341
+3	17976415	SNP-3.17975196.	C	A	.	PASS	AR2=0.988;DR2=0.99;AF=0.382	GT:DS:GP	0|0:0.108:0.895,0.101,0.004	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.112:0.89,0.107,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0.282:0.737,0.245,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.102:0.9,0.097,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.113:0.891,0.105,0.004	0|0:0.171:0.836,0.156,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.167:0.841,0.151,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.166:0.842,0.149,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.032:0.968,0.032,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.159:0.848,0.145,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.192:0.816,0.176,0.008	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.117:0.887,0.108,0.005	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.173:0.833,0.161,0.006	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.077:0.924,0.075,0.001	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.171:0.836,0.156,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.408:0.619,0.354,0.027	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17977120	SNP-3.17975901.	A	G	.	PASS	AR2=1;DR2=1;AF=0.235	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.943:0.058,0.942,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17980378	SNP-3.17979159.	A	G	.	PASS	AR2=0.974;DR2=0.98;AF=0.382	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.14:0.862,0.137,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.688:0.024,0.263,0.713	1|1:2:0,0,1	1|0:1.65:0.029,0.292,0.679	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.615:0.039,0.306,0.655	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.7:0.017,0.266,0.717	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.809:0.01,0.17,0.819	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.974:0.001,0.025,0.975	0|0:0.032:0.968,0.032,0	1|1:1.689:0.022,0.267,0.711	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.588:0.043,0.327,0.631	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.493:0.056,0.395,0.549	1|1:2:0,0,1	1|1:1.784:0.013,0.189,0.798	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.973:0.001,0.025,0.974	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.887:0.003,0.107,0.89	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.974:0.001,0.025,0.974	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.585:0.043,0.329,0.628	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.768:0.017,0.198,0.785	1|0:1:0,1,0	1|1:1.761:0.013,0.212,0.775	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.968:0.001,0.03,0.969	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.868:0.005,0.123,0.873	1|1:1.869:0.004,0.122,0.873	1|1:1.84:0.009,0.142,0.849	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.926:0.002,0.07,0.928	1|1:1.869:0.004,0.122,0.873	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.825:0.012,0.152,0.836	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.799:0.014,0.174,0.813
+3	17982733	SNP-3.17981514.	C	A	.	PASS	AR2=0.989;DR2=0.991;AF=0.388	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.932:0.001,0.066,0.933	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.322:0.678,0.322,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.696:0.022,0.259,0.719	1|1:1.837:0.017,0.129,0.854	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.818:0.003,0.175,0.821	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.956:0,0.043,0.956	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.753:0.012,0.223,0.765	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.982:0,0.018,0.982	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.748:0.008,0.237,0.755	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.952:0.002,0.044,0.954	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.786:0,0.214,0.786	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.933:0,0.066,0.933	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.725:0.019,0.236,0.745	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.837:0.025,0.113,0.862	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0
+3	17982916	SNP-3.17981697.	A	G	.	PASS	AR2=0.994;DR2=0.995;AF=0.42	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0.05:0.95,0.049,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.931,0.069,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.184:0.836,0.143,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.954,0.045,0.001	0|0:0:1,0,0	0|0:0.046:0.954,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.979:0,0.021,0.979	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.907:0.002,0.089,0.909	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.962,0.038,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.676:0.015,0.294,0.691	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.099:0.903,0.094,0.002	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.954,0.045,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.954,0.045,0.001	0|0:0:1,0,0	1|1:1.898:0.002,0.098,0.9	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.965:0.001,0.034,0.966	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17982990	SNP-3.17981771.	C	A	.	PASS	AR2=0.986;DR2=0.99;AF=0.282	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1.379:0.054,0.514,0.433	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.904:0.004,0.089,0.907	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.64:0.033,0.294,0.673	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.734:0.02,0.227,0.753	0|0:0:1,0,0	1|1:1.771:0.015,0.199,0.786	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.245:0.049,0.658,0.293	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.877:0.005,0.113,0.882	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.573:0.056,0.316,0.628	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	17983222	SNP-3.17982003.	C	A	.	PASS	AR2=0.977;DR2=0.984;AF=0.317	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.464:0.02,0.496,0.484	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.089:0.914,0.083,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.151:0.864,0.121,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.953,0.047,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.604:0.571,0.254,0.175	1|1:1.605:0.003,0.39,0.607	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.573:0.012,0.403,0.585	1|0:1.084:0.245,0.425,0.33	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.799:0.012,0.177,0.811	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.611:0.007,0.374,0.618	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.935:0.001,0.063,0.936	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.376:0.035,0.553,0.412	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.772:0.022,0.185,0.793	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.046:0.955,0.045,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17983505	SNP-3.17982286.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.226	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.967:0,0.032,0.968	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.164:0.849,0.138,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.198:0.802,0.198,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	17984594	SNP-3.17983375.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.345	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.108:0.895,0.102,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.065:0.936,0.064,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17984801	SNP-3.17983582.	C	A	.	PASS	AR2=0.953;DR2=0.964;AF=0.374	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.313:0.712,0.264,0.025	0|0:0:1,0,0	0|0:0.314:0.71,0.265,0.025	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.379:0.66,0.301,0.039	0|0:0.203:0.826,0.145,0.029	0|0:0.316:0.709,0.266,0.025	0|0:0.27:0.747,0.235,0.018	0|0:0.27:0.748,0.235,0.018	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.314:0.711,0.265,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.313:0.711,0.264,0.025	0|0:0:1,0,0	0|0:0.314:0.71,0.265,0.025	0|0:0:1,0,0	0|0:0.314:0.71,0.265,0.025	0|0:0.314:0.71,0.265,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.313:0.711,0.264,0.025	0|0:0.32:0.706,0.269,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.289:0.732,0.248,0.021	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.314:0.71,0.265,0.025	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.329:0.698,0.274,0.027	0|1:1:0,1,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.314:0.71,0.265,0.025	0|0:0.282:0.738,0.243,0.019	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.294:0.728,0.25,0.022	0|0:0.314:0.71,0.265,0.025	0|0:0.317:0.708,0.267,0.025	0|1:1:0,1,0	0|0:0.314:0.71,0.265,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.401:0.646,0.307,0.047	0|0:0.314:0.711,0.265,0.025	0|0:0:1,0,0	0|0:0.313:0.711,0.264,0.025	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0.314:0.71,0.265,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.317:0.708,0.266,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.329:0.698,0.274,0.027	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.329:0.698,0.274,0.027	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17985314	SNP-3.17984095.	A	G	.	PASS	AR2=1;DR2=1;AF=0.416	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17987234	SNP-3.17986015.	A	G	.	PASS	AR2=0.991;DR2=0.992;AF=0.242	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.931,0.067,0.001	0|0:0:1,0,0	0|0:0.088:0.914,0.084,0.002	0|0:0:1,0,0	0|0:0.075:0.926,0.072,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.093:0.909,0.089,0.002	0|0:0:1,0,0	0|0:0.094:0.908,0.089,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.094:0.909,0.089,0.002	0|0:0:1,0,0	0|0:0.094:0.908,0.089,0.002	0|0:0.094:0.908,0.089,0.002	0|0:0.094:0.908,0.089,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.957:0.001,0.042,0.958	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	1|1:1.948:0,0.051,0.949	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.982:0,0.018,0.982	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.994:0.006,0.993,0	1|1:1.973:0,0.026,0.973	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.001:0.008,0.982,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.094:0.908,0.089,0.002	0|0:0.081:0.92,0.078,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.089:0.913,0.085,0.002	0|0:0:1,0,0	0|0:0.094:0.908,0.089,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.094:0.908,0.089,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.087:0.915,0.083,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.952,0.048,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17992019	SNP-3.17990800.	A	G	.	PASS	AR2=1;DR2=1;AF=0.232	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.98,0.02,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17992271	SNP-3.17991052.	A	G	.	PASS	AR2=0.998;DR2=0.999;AF=0.416	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.067:0.935,0.064,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.587:0,0.412,0.588	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	17993746	SNP-3.17992527.	A	G	.	PASS	AR2=1;DR2=1;AF=0.233	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	17994360	SNP-3.17993141.	C	A	.	PASS	AR2=0.998;DR2=0.999;AF=0.343	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.083:0.919,0.079,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.066:0.936,0.063,0.001	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.046:0.955,0.044,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.95,0.048,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.925,0.074,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	17998130	SNP-3.17996911.	C	A	.	PASS	AR2=1;DR2=1;AF=0.333	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.057:0.944,0.055,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18001028	SNP-3.17999809.	C	A	.	PASS	AR2=0.997;DR2=0.998;AF=0.248	GT:DS:GP	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.299:0.751,0.198,0.051	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18001240	SNP-3.18000021.	C	A	.	PASS	AR2=0.994;DR2=0.994;AF=0.486	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.925:0,0.074,0.925	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.757:0.016,0.212,0.773	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.771:0.015,0.2,0.785	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:1.87:0.003,0.123,0.873	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.702:0.026,0.246,0.728	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.916:0.317,0.45,0.233	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1
+3	18001843	SNP-3.18000624.	C	A	.	PASS	AR2=0.992;DR2=0.994;AF=0.365	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.161:0.846,0.147,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.115:0.888,0.109,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.25:0.765,0.221,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.929:0.001,0.07,0.93	0|0:0.27:0.741,0.249,0.011	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.224:0.789,0.197,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0.07:0.932,0.066,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.161:0.846,0.147,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.194:0.816,0.174,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.979:0,0.021,0.979	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18002512	SNP-3.18001293.	C	A	.	PASS	AR2=0.996;DR2=0.996;AF=0.354	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|1:1:0,1,0	0|0:0.113:0.891,0.105,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.05,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.929,0.069,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.945,0.054,0.001	0|0:0:1,0,0	0|0:0.054:0.947,0.052,0.001	0|0:0.227:0.789,0.194,0.017	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0.055:0.946,0.053,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.242:0.773,0.212,0.015	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18004541	SNP-3.18003322.	A	G	.	PASS	AR2=0.954;DR2=0.965;AF=0.426	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.577:0.048,0.326,0.625	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.623:0.033,0.311,0.656	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.132:0.875,0.118,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1.617:0.037,0.309,0.654	0|0:0:1,0,0	1|1:1.62:0.037,0.307,0.656	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.724:0.053,0.169,0.777	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.353:0.019,0.608,0.372	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.576:0.049,0.327,0.625	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.563:0.051,0.334,0.615	1|1:1.686:0.025,0.263,0.712	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.58:0.047,0.325,0.627	1|0:1.594:0.044,0.319,0.638	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.609:0.038,0.316,0.647	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.576:0.049,0.327,0.625	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.761:0.015,0.209,0.776	1|1:2:0,0,1	1|1:1.794:0.02,0.166,0.814	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.782:0.015,0.188,0.797	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.659:0.028,0.284,0.688	0|0:0:1,0,0	1|1:1.64:0.034,0.293,0.674	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.782:0.012,0.194,0.794	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.67:0.029,0.273,0.698	0|0:0:1,0,0	1|1:1.576:0.049,0.327,0.625	0|0:0:1,0,0	1|1:1.617:0.037,0.309,0.654	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.617:0.037,0.309,0.654	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.62:0.037,0.307,0.656	0|0:0:1,0,0	1|0:0.88:0.33,0.46,0.21	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.811:0.013,0.164,0.823	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18005201	SNP-3.18003982.	C	A	.	PASS	AR2=0.998;DR2=0.999;AF=0.394	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.254:0.747,0.252,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.033:0.967,0.032,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.944,0.051,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1
+3	18005519	SNP-3.18004300.	A	G	.	PASS	AR2=0.967;DR2=0.975;AF=0.297	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	1|0:1.009:0,0.991,0.009	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.953,0.044,0.003	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0.233:0.777,0.214,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0.114:0.894,0.098,0.008	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.109:0.894,0.103,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.947:0.004,0.046,0.95	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.533:0.073,0.32,0.607	0|0:0:1,0,0	0|0:0.235:0.765,0.235,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.639:0.037,0.288,0.675	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.53:0.087,0.296,0.617	1|1:1.65:0.038,0.275,0.687	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.617:0.044,0.294,0.662	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.573:0.056,0.315,0.629	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.991:0,0.009,0.991	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.899:0.004,0.093,0.903	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.636:0.039,0.285,0.676	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.145:0.859,0.137,0.004	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.637:0.039,0.284,0.676	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0.101:0.902,0.095,0.003	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.343:0.104,0.449,0.447	1|1:1.57:0.076,0.278,0.646	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.101:0.902,0.095,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.644:0.038,0.279,0.682	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.938,0.06,0.002	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18006612	SNP-3.18005393.	C	A	.	PASS	AR2=1;DR2=1;AF=0.329	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18007453	SNP-3.18006234.	A	G	.	PASS	AR2=0.961;DR2=0.966;AF=0.339	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	1|1:1.779:0.046,0.129,0.825	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.964:0.001,0.034,0.965	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.402:0.632,0.335,0.033	1|1:1.882:0,0.118,0.882	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.33:0.1,0.47,0.43	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.058:0.222,0.497,0.28	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.096:0.205,0.493,0.302	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.121:0.193,0.493,0.314	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.158:0.179,0.484,0.337	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.129:0.189,0.492,0.318	0|0:0:1,0,0	0|1:1.175:0.169,0.487,0.344	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.157:0.18,0.484,0.336	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.929:0,0.071,0.929	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.25:0.137,0.476,0.387	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.09:0.208,0.494,0.298	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.158:0.174,0.495,0.332	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.262:0.144,0.45,0.406	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.109:0.198,0.494,0.307	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.346:0.135,0.384,0.481	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18007753	SNP-3.18006534.	A	G	.	PASS	AR2=1;DR2=1;AF=0.226	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18008086	SNP-3.18006867.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.336	GT:DS:GP	0|0:0:1,0,0	1|1:1.938:0.001,0.06,0.939	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.969:0.031,0.969,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.942:0.001,0.056,0.943	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.946:0.001,0.052,0.947	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.055:0.946,0.053,0.001	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18008186	SNP-3.18006967.	C	A	.	PASS	AR2=0.985;DR2=0.988;AF=0.31	GT:DS:GP	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.692:0.025,0.259,0.717	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.903:0.097,0.903,0	1|1:2:0,0,1	1|1:1.696:0.024,0.256,0.72	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.711:0.021,0.248,0.731	1|1:1.695:0.024,0.257,0.719	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.692:0.025,0.259,0.717	1|1:1.727:0.019,0.234,0.747	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.745:0.018,0.22,0.763	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.797:0.009,0.184,0.806	1|1:1.745:0.018,0.22,0.763	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.8:0.014,0.172,0.814	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18009334	SNP-3.18008115.	C	A	.	PASS	AR2=0.976;DR2=0.98;AF=0.37	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.453:0.61,0.326,0.064	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.719:0.411,0.46,0.13	1|0:0.716:0.413,0.459,0.129	0|0:0.719:0.411,0.46,0.13	0|0:0:1,0,0	0|0:0.719:0.411,0.46,0.13	0|0:0:1,0,0	0|1:1:0,1,0	0|1:0.719:0.411,0.46,0.13	0|1:0.719:0.41,0.46,0.13	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.719:0.411,0.46,0.13	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:0.718:0.411,0.459,0.129	1|0:0.823:0.337,0.504,0.159	1|1:2:0,0,1	0|0:0:1,0,0
+3	18010017	SNP-3.18008798.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.364	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.306:0.718,0.258,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.393:0.607,0.393,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.087:0.913,0.087,0	1|0:1:0,1,0	0|0:0.089:0.911,0.089,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.096:0.908,0.088,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.238:0.776,0.21,0.014	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18010363	SNP-3.18009144.	C	A	.	PASS	AR2=1;DR2=1;AF=0.331	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18010609	SNP-3.18009390.	A	G	.	PASS	AR2=1;DR2=1;AF=0.224	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18010730	SNP-3.18009511.	C	A	.	PASS	AR2=0.998;DR2=0.999;AF=0.335	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.178:0.833,0.156,0.011	0|0:0.163:0.847,0.143,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18011285	SNP-3.18010066.	C	A	.	PASS	AR2=0.973;DR2=0.982;AF=0.404	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.046:0.386,0.182,0.432	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.104:0.196,0.504,0.3	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.53:0.503,0.463,0.034	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	1|0:1.409:0,0.591,0.409	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0.01:0.99,0.01,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.064:0,0.936,0.064	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.957,0.041,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.963:0.27,0.498,0.232	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.208:0.792,0.208,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.693:0.321,0.665,0.014	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:0.898:0.307,0.489,0.204	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.238:0.776,0.21,0.014	0|0:0:1,0,0	0|0:0.585:0.502,0.41,0.087	1|1:2:0,0,1	0|0:0:1,0,0
+3	18012005	SNP-3.18010786.	C	A	.	PASS	AR2=0.992;DR2=0.994;AF=0.382	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.642:0.076,0.207,0.718	1|1:2:0,0,1	1|1:1.96:0.001,0.039,0.961	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.914:0.001,0.085,0.915	1|1:1.906:0,0.093,0.907	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.966:0.001,0.033,0.967	1|1:1.961:0.001,0.037,0.962	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0.001,0.027,0.973	1|1:1.959:0.001,0.039,0.96	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.976:0.024,0.976,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.377:0.623,0.377,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.949,0.051,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.948:0.002,0.047,0.951	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.984:0,0.015,0.985	1|1:1.991:0,0.009,0.991	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.082:0.92,0.079,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.978:0,0.022,0.978	0|0:0:1,0,0	1|1:1.972:0,0.028,0.972	0|0:0:1,0,0	1|1:1.984:0,0.016,0.984	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.97:0,0.029,0.97	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.976:0.001,0.022,0.977	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.974:0.001,0.024,0.975	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.972:0.001,0.027,0.972	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.06:0.941,0.058,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.97:0.001,0.029,0.97	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.027,0.972	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1
+3	18012176	SNP-3.18010957.	A	G	.	PASS	AR2=0.998;DR2=0.999;AF=0.212	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.76:0.015,0.211,0.775	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18012537	SNP-3.18011318.	A	G	.	PASS	AR2=0.992;DR2=0.992;AF=0.292	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.959,0.04,0.001	0|0:0.119:0.884,0.113,0.003	0|0:0.106:0.897,0.1,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.107:0.896,0.101,0.003	0|0:0.118:0.885,0.111,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.092:0.91,0.089,0.001	0|0:0:1,0,0	0|0:0.128:0.876,0.12,0.004	0|0:0:1,0,0	0|0:0.118:0.885,0.111,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.921:0.082,0.914,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.984:0,0.016,0.984	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.118:0.885,0.111,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.959:0,0.041,0.959	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.09:0.911,0.088,0.001	0|0:0:1,0,0	0|0:0.118:0.885,0.111,0.004	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.987:0,0.013,0.987	1|1:1.967:0,0.032,0.967	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.118:0.886,0.111,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.965:0,0.035,0.965	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.925:0.002,0.071,0.927	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.921:0.003,0.072,0.924	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.979:0,0.02,0.98	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18013199	SNP-3.18011980.	A	G	.	PASS	AR2=1;DR2=1;AF=0.379	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	18014557	SNP-3.18013338.	C	A	.	PASS	AR2=1;DR2=1;AF=0.333	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18015174	SNP-3.18013955.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.251	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.934,0.065,0.001	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.075:0.925,0.075,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.019:0.981,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.965,0.035,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.019:0.982,0.018,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18017113	SNP-3.18015894.	A	G	.	PASS	AR2=1;DR2=1;AF=0.222	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18018195	SNP-3.18016976.	A	G	.	PASS	AR2=1;DR2=1;AF=0.235	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18018315	SNP-3.18017096.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.238	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.938,0.061,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18018917	SNP-3.18017698.	A	G	.	PASS	AR2=1;DR2=1;AF=0.212	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18019947	SNP-3.18018728.	C	A	.	PASS	AR2=0.978;DR2=0.983;AF=0.338	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.285:0.736,0.244,0.02	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.2:0.8,0.2,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.297:0.725,0.254,0.022	0|0:0.285:0.736,0.244,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.845:0.005,0.145,0.85	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.825:0,0.174,0.825	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.297:0.725,0.254,0.022	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.277:0.742,0.239,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.272:0.747,0.235,0.019	0|0:0.272:0.747,0.235,0.019	0|0:0.272:0.747,0.235,0.019	0|0:0:1,0,0	0|0:0.272:0.747,0.235,0.019	0|0:0:1,0,0	0|0:0.272:0.747,0.235,0.019	0|0:0.272:0.747,0.235,0.019	0|0:0.272:0.747,0.235,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.272:0.747,0.235,0.019	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.285:0.736,0.244,0.02	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18020149	SNP-3.18018930.	C	A	.	PASS	AR2=1;DR2=1;AF=0.325	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18022146	SNP-3.18020927.	C	A	.	PASS	AR2=0.943;DR2=0.955;AF=0.405	GT:DS:GP	1|1:1.494:0.061,0.385,0.554	1|1:1.925:0,0.075,0.925	0|0:0:1,0,0	1|1:1.837:0.016,0.131,0.853	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.771:0.014,0.202,0.784	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.83:0.012,0.147,0.842	0|1:1.069:0.19,0.551,0.259	0|1:1.405:0.042,0.512,0.447	1|1:2:0,0,1	0|1:0.874:0.241,0.644,0.115	0|1:0.933:0.211,0.645,0.144	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.375:0.667,0.291,0.042	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.988:0.052,0.908,0.04	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.852:0.191,0.765,0.043	0|1:1.093:0.162,0.583,0.255	0|1:0.802:0.209,0.779,0.011	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.581:0.025,0.369,0.606	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0	1|1:1.702:0.021,0.256,0.723	1|0:0.643:0.43,0.497,0.073	1|1:2:0,0,1	1|0:1.369:0.101,0.429,0.47	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.74:0.306,0.647,0.047	0|0:0:1,0,0	1|1:1.711:0.029,0.23,0.74	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.276:0.136,0.452,0.412	1|1:1.943:0.002,0.052,0.946	0|0:0:1,0,0	1|1:1.858:0.015,0.113,0.873	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.011:0.024,0.94,0.035	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.977:0,0.023,0.977	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.19:0.104,0.602,0.294	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.528:0.033,0.405,0.561	1|1:1.697:0.025,0.253,0.722	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.418:0.026,0.53,0.444	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.069:0.121,0.688,0.191	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.008:0.259,0.474,0.267	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.803:0.012,0.173,0.815	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.308:0.001,0.689,0.31	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.08:0.091,0.738,0.171	0|0:0.396:0.649,0.305,0.046	1|1:2:0,0,1	1|0:1.305:0.118,0.459,0.423	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.758:0.006,0.231,0.764	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.973:0,0.027,0.973	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.618:0.043,0.296,0.661
+3	18022434	SNP-3.18021215.	A	G	.	PASS	AR2=1;DR2=1;AF=0.317	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	18023297	SNP-3.18022078.	A	G	.	PASS	AR2=1;DR2=1;AF=0.233	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18023858	SNP-3.18022639.	A	G	.	PASS	AR2=0.997;DR2=0.998;AF=0.238	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.966:0,0.034,0.966	0|0:0:1,0,0	1|1:1.961:0,0.038,0.961	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.967:0,0.033,0.967	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.027,0.972	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.026,0.973	1|1:2:0,0,1	1|1:1.955:0,0.044,0.955	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.313:0.688,0.311,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18024093	SNP-3.18022874.	C	A	.	PASS	AR2=1;DR2=1;AF=0.333	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0.011:0.989,0.011,0	1|1:1.954:0,0.046,0.954	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18027733	SNP-3.18026514.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.354	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.115:0.893,0.1,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.956,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.171:0.837,0.155,0.008	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.18:0.829,0.162,0.009	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.156:0.854,0.135,0.01	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.958,0.042,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18027874	SNP-3.18026655.	A	G	.	PASS	AR2=1;DR2=1;AF=0.235	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18030683	SNP-3.18029464.	A	G	.	PASS	AR2=0.928;DR2=0.949;AF=0.273	GT:DS:GP	0|1:1:0,1,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.501:0.584,0.332,0.085	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.186:0.823,0.168,0.009	0|0:0:1,0,0	0|0:0.164:0.843,0.151,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.186:0.823,0.168,0.009	1|1:1.79:0.021,0.167,0.812	0|0:0.186:0.823,0.168,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.186:0.823,0.168,0.009	0|0:0:1,0,0	0|0:0.186:0.823,0.168,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:1.115:0.262,0.361,0.377	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.498:0.065,0.371,0.564	0|1:1.203:0.142,0.513,0.345	1|0:1.474:0.065,0.396,0.539	1|1:1.802:0.006,0.185,0.809	1|1:2:0,0,1	1|1:1.616:0.035,0.315,0.651	0|1:1.417:0.08,0.422,0.497	1|1:1.522:0.054,0.369,0.577	0|0:0.028:0.972,0.028,0	1|0:1.209:0.136,0.52,0.344	1|1:2:0,0,1	0|1:1.537:0.048,0.367,0.585	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.099:0.905,0.091,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.952,0.047,0.001	1|1:2:0,0,1	1|1:1.501:0.065,0.368,0.567	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.622:0.008,0.361,0.63	0|1:1.341:0.101,0.456,0.443	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.935,0.065,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.469:0.06,0.411,0.529	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.694:0.019,0.268,0.713	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.049:0.952,0.046,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.757:0.03,0.182,0.787	1|1:2:0,0,1	1|1:1.87:0.005,0.121,0.874	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.186:0.823,0.168,0.009	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.805:0.009,0.176,0.815	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.186:0.823,0.168,0.009	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.913:0.002,0.083,0.915	0|1:1:0,1,0	0|0:0.186:0.823,0.168,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.628:0.03,0.311,0.659	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.859:0.004,0.132,0.864	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.952,0.046,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.174:0.251,0.324,0.425	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18035945	SNP-3.18034726.	A	G	.	PASS	AR2=0.995;DR2=0.995;AF=0.254	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.128:0.877,0.118,0.005	0|0:0.098:0.904,0.093,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.088:0.914,0.084,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.098:0.904,0.093,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.098:0.904,0.093,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.993:0,0.007,0.993	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	0|0:0:1,0,0	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.065:0.937,0.062,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.841:0,0.159,0.841	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.991:0,0.009,0.991	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.006:0.994,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.098:0.904,0.093,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18037971	SNP-3.18036752.	A	G	.	PASS	AR2=0.979;DR2=0.984;AF=0.293	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.484:0.118,0.279,0.602	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.284:0.734,0.249,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.167:0.842,0.149,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.14:0.865,0.13,0.005	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.194:0.127,0.553,0.32	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:0.509:0.506,0.478,0.016	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.956,0.044,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.166:0.843,0.148,0.009	0|0:0.126:0.879,0.116,0.005	0|0:0.172:0.836,0.156,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.679:0.054,0.213,0.733	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.275:0.748,0.229,0.023	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.154:0.853,0.14,0.007	0|0:0.142:0.864,0.13,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18038175	SNP-3.18036956.	A	G	.	PASS	AR2=0.986;DR2=0.988;AF=0.253	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.908:0.002,0.088,0.91	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.908:0.002,0.088,0.91	1|1:2:0,0,1	1|1:1.908:0.002,0.088,0.91	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.026:0.974,0.025,0.001	1|1:2:0,0,1	1|1:1.908:0.002,0.088,0.91	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.908:0.002,0.088,0.91	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.743:0.008,0.241,0.751	1|1:1.908:0.002,0.088,0.91	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.182:0.819,0.181,0	0|0:0.126:0.881,0.112,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.369:0.636,0.359,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.908:0.002,0.088,0.91	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.908:0.002,0.088,0.91	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.908:0.002,0.088,0.91	1|1:2:0,0,1	1|1:1.908:0.002,0.088,0.91	1|1:1.908:0.002,0.088,0.91	1|1:1.908:0.002,0.088,0.91	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.908:0.002,0.088,0.91	0|0:0.049:0.951,0.048,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.908:0.002,0.088,0.91	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.908:0.002,0.088,0.91	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	18040460	SNP-3.18039241.	C	A	.	PASS	AR2=1;DR2=1;AF=0.331	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18041701	SNP-3.18040482.	C	A	.	PASS	AR2=1;DR2=1;AF=0.331	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18041916	SNP-3.18040697.	C	A	.	PASS	AR2=1;DR2=1;AF=0.335	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18042800	SNP-3.18041581.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.332	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.906:0.099,0.897,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.896:0.107,0.89,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18043099	SNP-3.18041880.	C	A	.	PASS	AR2=1;DR2=1;AF=0.331	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18043844	SNP-3.18042625.	C	A	.	PASS	AR2=0.991;DR2=0.992;AF=0.324	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.916:0.004,0.076,0.92	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.084:0.917,0.082,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.826:0.009,0.156,0.835	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.793:0.008,0.191,0.801	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.754:0.015,0.216,0.769	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.032:0.968,0.032,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.828:0.008,0.155,0.836	0|1:1:0,1,0	0|0:0.165:0.838,0.159,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	0|0:0:1,0,0	1|1:1.928:0.004,0.065,0.932	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.892:0.002,0.104,0.894	1|1:1.882:0.001,0.115,0.883	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.033:0.967,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.348:0.685,0.281,0.034	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18043944	SNP-3.18042725.	A	G	.	PASS	AR2=0.989;DR2=0.99;AF=0.225	GT:DS:GP	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.841:0.006,0.146,0.848	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	1|1:1.841:0.006,0.146,0.848	1|1:2:0,0,1	1|1:1.841:0.006,0.146,0.848	1|1:1.841:0.006,0.146,0.848	0|0:0.049:0.952,0.047,0.001	1|1:1.841:0.006,0.146,0.848	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.841:0.006,0.146,0.848	1|1:2:0,0,1	1|1:1.841:0.006,0.146,0.848	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.077:0.924,0.076,0.001	0|0:0.019:0.981,0.019,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.969,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.841:0.006,0.146,0.848	1|1:1.841:0.006,0.146,0.848	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.841:0.006,0.146,0.848	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18044408	SNP-3.18043189.	C	A	.	PASS	AR2=0.933;DR2=0.934;AF=0.452	GT:DS:GP	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.003:0.997,0.003,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.003:0.249,0.5,0.252	1|0:1.002:0.249,0.5,0.251	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.002:0.249,0.5,0.251	0|1:1:0,1,0	1|1:0.979:0.261,0.499,0.24	1|0:1:0,1,0	1|0:1:0,1,0	1|0:0.381:0.671,0.276,0.053	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1.002:0.249,0.5,0.251	0|1:1.002:0.249,0.5,0.251	0|1:1.002:0.249,0.5,0.251	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.903,0.097,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.825:0,0.175,0.825	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:1.002:0.249,0.5,0.251	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.002:0.249,0.5,0.251	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1.002:0.249,0.5,0.251	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1.002:0.249,0.5,0.251	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.002:0.249,0.5,0.251	0|0:0:1,0,0	1|0:1.002:0.249,0.5,0.251	1|1:1.002:0.249,0.5,0.251	0|1:1:0,1,0	1|0:1.002:0.249,0.5,0.251	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.002:0.249,0.5,0.251	1|1:2:0,0,1	0|0:0.81:0.389,0.413,0.199	0|1:1.002:0.249,0.5,0.251	1|0:1.002:0.249,0.5,0.251	0|0:0:1,0,0	1|0:1.002:0.249,0.5,0.251	0|1:1.002:0.249,0.5,0.251	0|0:0:1,0,0	1|1:1.002:0.249,0.5,0.251	0|1:1.002:0.249,0.5,0.251	0|1:1.002:0.249,0.5,0.251	1|1:1.002:0.249,0.5,0.251	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.002:0.249,0.5,0.251	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18044523	SNP-3.18043304.	A	G	.	PASS	AR2=1;DR2=1;AF=0.23	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18044759	SNP-3.18043540.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.331	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.852:0.008,0.132,0.86	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.103:0.9,0.097,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.103:0.9,0.097,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	18044873	SNP-3.18043654.	A	G	.	PASS	AR2=0.993;DR2=0.995;AF=0.305	GT:DS:GP	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.984:0,0.016,0.984	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.877:0.007,0.109,0.884	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.677:0.004,0.315,0.681	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.977:0,0.023,0.977	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.943:0.001,0.056,0.944	1|1:1.871:0.003,0.123,0.874	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.926:0.001,0.073,0.927	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.512:0.013,0.462,0.525	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.979:0,0.02,0.98	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.976:0,0.024,0.976	1|1:2:0,0,1	1|1:1.934:0,0.065,0.934	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	18045182	SNP-3.18043963.	A	G	.	PASS	AR2=0.988;DR2=0.989;AF=0.224	GT:DS:GP	0|0:0.04:0.96,0.039,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.835:0.007,0.151,0.842	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.783:0.013,0.19,0.796	1|1:2:0,0,1	1|1:1.855:0.005,0.135,0.86	1|1:1.842:0.006,0.145,0.849	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.82:0.008,0.164,0.828	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:1.843:0.006,0.145,0.849	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.832:0.007,0.154,0.839	1|1:2:0,0,1	1|1:1.846:0.006,0.141,0.852	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.843:0.157,0.843,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.943,0.057,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.842:0.006,0.146,0.848	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.876:0.005,0.115,0.88	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18046030	SNP-3.18044811.	C	A	.	PASS	AR2=0.989;DR2=0.991;AF=0.326	GT:DS:GP	0|0:0:1,0,0	1|1:1.943:0.001,0.056,0.944	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.956:0.001,0.043,0.957	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.959:0,0.041,0.959	1|1:2:0,0,1	1|1:1.873:0.01,0.108,0.883	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.865:0.004,0.127,0.869	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:1.956:0.001,0.042,0.957	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.974:0,0.026,0.974	1|1:1.952:0.001,0.046,0.953	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.936:0.001,0.062,0.937	0|0:0:1,0,0	1|1:1.935:0.002,0.061,0.937	1|1:1.93:0.003,0.064,0.933	1|1:1.948:0.001,0.05,0.949	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.914:0.001,0.085,0.914	1|1:2:0,0,1	1|1:1.948:0.001,0.051,0.949	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.945:0.001,0.054,0.946	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.965:0,0.034,0.965	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.843:0.015,0.128,0.858	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.374:0.066,0.494,0.44	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.542:0.007,0.444,0.549	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.958,0.042,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.95:0,0.049,0.95	0|0:0.018:0.982,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	1|1:1.97:0,0.029,0.971	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:1.982:0,0.017,0.983	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18046077	SNP-3.18044858.	A	G	.	PASS	AR2=0.911;DR2=0.934;AF=0.3	GT:DS:GP	1|0:1.434:0.08,0.406,0.514	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.144:0.861,0.133,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.212:0.803,0.182,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.189:0.819,0.172,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.154:0.852,0.142,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.156:0.85,0.143,0.006	1|1:2:0,0,1	0|1:1.391:0.063,0.482,0.455	1|1:1.841:0.005,0.149,0.846	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.431:0.019,0.531,0.45	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.677:0.42,0.483,0.097	1|1:2:0,0,1	1|0:0.855:0.34,0.464,0.195	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.662:0.038,0.261,0.701	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.909:0.002,0.087,0.911	1|1:1.508:0.061,0.37,0.569	1|1:1.444:0.052,0.451,0.497	0|0:0.748:0.473,0.306,0.221	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.796:0.01,0.184,0.806	0|1:1.535:0.055,0.356,0.589	1|1:1.444:0.07,0.416,0.514	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.722:0.398,0.483,0.12	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.938,0.061,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.086:0.917,0.081,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.151:0.856,0.137,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.243:0.117,0.522,0.36	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.504:0.062,0.372,0.566	1|1:2:0,0,1	0|0:0.207:0.805,0.183,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.935,0.064,0.001	0|0:0.096:0.906,0.091,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.564:0.048,0.34,0.612	0|0:0:1,0,0	1|1:1.538:0.053,0.355,0.591	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.64:0.04,0.279,0.68	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.219:0.806,0.169,0.025	1|1:1.551:0.049,0.35,0.6	0|0:0:1,0,0	0|0:0.193:0.818,0.171,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.568:0.46,0.512,0.028	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.196:0.814,0.176,0.01	1|1:1.499:0.063,0.375,0.562	0|0:0:1,0,0	0|1:0.962:0.164,0.711,0.125	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.529:0.056,0.359,0.585	1|1:1.833:0.006,0.155,0.839	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.185:0.823,0.168,0.008	0|0:0.169:0.838,0.155,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.45:0.077,0.396,0.527	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.141:0.865,0.128,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.262:0.119,0.499,0.381	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.036:0.965,0.035,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.67:0.026,0.278,0.696	1|1:2:0,0,1	1|1:1.625:0.04,0.295,0.665	1|1:1.877:0.003,0.116,0.881	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.791:0.029,0.15,0.821	1|1:1.787:0.033,0.148,0.82	0|0:0.043:0.958,0.042,0.001	0|0:0:1,0,0
+3	18048585	SNP-3.18047366.	A	G	.	PASS	AR2=0.976;DR2=0.98;AF=0.399	GT:DS:GP	1|1:2:0,0,1	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.085:0.916,0.083,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.095:0.908,0.09,0.002	0|0:0.127:0.878,0.118,0.005	0|0:0:1,0,0	0|0:0.122:0.884,0.111,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.088:0.914,0.083,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.953,0.047,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.12:0.885,0.11,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.337:0.682,0.3,0.018	0|0:0.073:0.927,0.073,0	0|0:0.181:0.832,0.155,0.013	0|0:0.455:0.644,0.257,0.099	0|0:0.125:0.876,0.124,0.001	0|0:0.161:0.843,0.152,0.004	0|0:0.164:0.84,0.155,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.094:0.906,0.093,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.131:0.874,0.121,0.005	0|0:0.179:0.83,0.161,0.009	0|0:0.195:0.818,0.169,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.119:0.888,0.106,0.006	1|1:2:0,0,1	0|0:0.212:0.788,0.211,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.089:0.912,0.086,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.077:0.925,0.074,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.255:0.753,0.239,0.008	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.076:0.925,0.073,0.002	0|0:0.106:0.897,0.101,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.1:0.903,0.094,0.003	0|0:0.2:0.811,0.178,0.011	0|0:0:1,0,0	0|0:0.121:0.883,0.113,0.004	0|0:0.123:0.881,0.115,0.004	0|0:0.337:0.678,0.308,0.014	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0.118:0.887,0.107,0.005	0|0:0.156:0.852,0.139,0.008	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.123:0.881,0.116,0.004	0|0:0.133:0.871,0.124,0.005	0|0:0.098:0.905,0.092,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	18053020	SNP-3.18051801.	C	A	.	PASS	AR2=0.978;DR2=0.981;AF=0.276	GT:DS:GP	0|0:0:1,0,0	1|1:1.883:0,0.117,0.883	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.953,0.047,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.811:0.008,0.173,0.819	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1.079:0.215,0.491,0.294	1|0:1:0,1,0	1|1:1.32:0.102,0.476,0.422	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1.114:0.2,0.486,0.314	1|1:1.97:0,0.03,0.97	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.813:0.018,0.151,0.831	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.065:0.216,0.502,0.282	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.482:0.039,0.441,0.52	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.815:0.022,0.141,0.837	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.876:0.005,0.114,0.881	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.897:0.003,0.098,0.9	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.853:0.007,0.132,0.861	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.911:0.002,0.084,0.914	0|0:0:1,0,0
+3	18053071	SNP-3.18051852.	A	G	.	PASS	AR2=0.938;DR2=0.953;AF=0.237	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.471:0.085,0.358,0.556	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.658:0.001,0.34,0.659	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.756:0.016,0.213,0.772	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.32:0.133,0.414,0.453	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.036:0.965,0.035,0.001	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.945,0.054,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.943,0.057,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.434:0.572,0.422,0.006	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.921:0.269,0.541,0.19	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.712:0.396,0.496,0.108	0|0:0.216:0.788,0.209,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.083:0.922,0.073,0.005	0|0:0:1,0,0	0|0:0.234:0.781,0.204,0.015	0|0:0.277:0.734,0.256,0.01	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.793:0.233,0.74,0.027	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.057:0.945,0.053,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.289:0.716,0.28,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.213:0.081,0.625,0.294	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.576:0.041,0.342,0.617	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.78:0.013,0.194,0.793	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.958,0.042,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.13:0.201,0.469,0.331	1|1:1.649:0.033,0.285,0.682	1|1:1.507:0.06,0.373,0.567	1|1:1.5:0.055,0.389,0.556	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.069:0.935,0.061,0.004	0|1:0.802:0.356,0.486,0.158	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.78:0.013,0.194,0.793	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.611:0.526,0.337,0.137	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.803:0.012,0.172,0.816	1|1:1.669:0.028,0.275,0.697	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0.032:0.968,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.281:0.743,0.233,0.024	0|0:0:1,0,0	0|0:0.022:0.979,0.021,0.001	0|0:0:1,0,0	0|0:0:1,0,0
+3	18054349	SNP-3.18053130.	A	G	.	PASS	AR2=0.978;DR2=0.983;AF=0.317	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.981:0,0.018,0.981	0|0:0:1,0,0	0|0:0.047:0.953,0.047,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.505:0.098,0.298,0.604	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.091:0.91,0.09,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:1.855:0.007,0.13,0.862	1|1:1.905:0.002,0.091,0.907	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.909:0.001,0.089,0.91	0|0:0:1,0,0	1|1:1.615:0.037,0.311,0.652	1|1:2:0,0,1	1|1:1.74:0.02,0.22,0.76	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.542:0.043,0.372,0.585	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.717:0.014,0.255,0.731	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.849:0.008,0.136,0.856	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.004:0.996,0.004,0	0|0:0.001:0.999,0.001,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.957,0.043,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.161:0.843,0.153,0.004	0|0:0.178:0.827,0.168,0.005	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	0|0:0.089:0.912,0.088,0.001	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.081:0.921,0.077,0.002	0|0:0:1,0,0	1|1:1.938:0.001,0.059,0.94	0|0:0:1,0,0	0|0:0.135:0.883,0.099,0.018	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.081:0.919,0.081,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.89:0.002,0.106,0.892	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0.095:0.905,0.094,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.926:0,0.074,0.926	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0.577:0.5,0.424,0.076	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	18062019	SNP-3.18060800.	A	G	.	PASS	AR2=0.991;DR2=0.993;AF=0.256	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.14:0.866,0.129,0.006	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.704:0.011,0.274,0.715	1|1:2:0,0,1	0|0:0.157:0.851,0.14,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.954,0.045,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.114:0.889,0.108,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.123:0.883,0.111,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.329:0.695,0.282,0.023	0|0:0.137:0.863,0.137,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.962,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18063349	SNP-3.18062130.	C	A	.	PASS	AR2=0.937;DR2=0.952;AF=0.412	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.382:0.656,0.305,0.038	0|0:0.135:0.872,0.121,0.007	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.231:0.785,0.2,0.015	0|0:0:1,0,0	0|0:0.428:0.609,0.355,0.036	1|1:2:0,0,1	0|1:0.49:0.572,0.366,0.062	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.333:0.693,0.28,0.027	0|1:1:0,1,0	0|1:0.571:0.482,0.466,0.053	0|0:0.232:0.784,0.2,0.016	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.23:0.785,0.2,0.015	0|0:0:1,0,0	0|0:0.266:0.752,0.231,0.017	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.273:0.748,0.231,0.021	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.223:0.785,0.206,0.009	0|0:0.468:0.588,0.356,0.056	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.37:0.659,0.313,0.028	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.075:0.926,0.074,0.001	0|0:0:1,0,0	0|0:0.24:0.763,0.235,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.354:0.664,0.318,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.209:0.799,0.194,0.007	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.444:0.607,0.342,0.051	0|0:0.2:0.81,0.179,0.01	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.099:0.902,0.098,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.72:0.392,0.496,0.112	1|1:2:0,0,1	0|0:0.028:0.972,0.028,0	1|1:2:0,0,1	0|0:0.149:0.852,0.147,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.299:0.708,0.285,0.007	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.202:0.804,0.189,0.006	0|0:0.268:0.749,0.235,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.064:0.939,0.058,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.065:0.936,0.063,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.56:0.563,0.315,0.122	0|0:0.237:0.779,0.205,0.016	1|0:1:0,1,0	0|0:0.243:0.758,0.24,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.181:0.825,0.17,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.23:0.785,0.2,0.015	0|0:0.23:0.785,0.2,0.015	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.031:0.969,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.274:0.752,0.222,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.191:0.816,0.176,0.007	0|0:0.261:0.756,0.226,0.017	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.166:0.835,0.163,0.001	0|0:0.353:0.659,0.33,0.011	0|0:0.28:0.746,0.227,0.027	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.362:0.673,0.293,0.034	0|0:0.055:0.946,0.053,0.001	0|0:0.23:0.785,0.2,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.16:0.847,0.146,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.149:0.879,0.094,0.028	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.57:0.531,0.368,0.101	1|1:2:0,0,1	0|0:0:1,0,0
+3	18063776	SNP-3.18062557.	A	G	.	PASS	AR2=0.943;DR2=0.956;AF=0.276	GT:DS:GP	1|1:1.46:0.035,0.47,0.495	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.811:0.375,0.438,0.187	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.532:0.047,0.375,0.578	0|1:1:0,1,0	1|1:1.706:0.018,0.259,0.723	0|0:0:1,0,0	1|1:1.529:0.016,0.439,0.545	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.294:0.101,0.504,0.395	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.48:0.021,0.479,0.501	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.85:0.004,0.142,0.854	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.591:0.009,0.392,0.6	1|0:0.833:0.265,0.636,0.098	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.952:0.001,0.046,0.953	1|1:1.928:0.001,0.07,0.929	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.809:0.004,0.183,0.813	1|1:2:0,0,1	1|1:1.606:0.024,0.346,0.63	0|0:0:1,0,0	0|1:0.937:0.23,0.604,0.166	0|1:0.679:0.405,0.511,0.084	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.773:0.005,0.216,0.779	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.295:0.161,0.383,0.456	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.783:0.032,0.154,0.815	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.287:0.114,0.485,0.401	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.748:0.028,0.196,0.776	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.925:0.002,0.071,0.927	0|0:0:1,0,0	0|1:0.989:0.097,0.816,0.087	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.876:0.005,0.113,0.882	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.796:0.208,0.788,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.872:0.327,0.473,0.2	1|1:1.646:0.02,0.315,0.666	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.943:0.001,0.054,0.945	1|0:1.483:0.074,0.369,0.557	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.949:0.001,0.049,0.95	1|1:2:0,0,1	1|1:1.943:0.001,0.054,0.944	1|1:1.648:0.025,0.303,0.672	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	18066116	SNP-3.18064897.	A	G	.	PASS	AR2=0.993;DR2=0.994;AF=0.227	GT:DS:GP	1|1:1.923:0.001,0.074,0.925	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.928:0.003,0.066,0.931	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.861:0.005,0.13,0.865	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.913:0.003,0.081,0.916	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.894:0.004,0.099,0.898	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:0.897:0.131,0.841,0.028	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.145:0.859,0.137,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.896:0.006,0.093,0.901	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.947:0.002,0.05,0.948	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.941,0.057,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.958,0.041,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18068233	SNP-3.18067014.	A	G	.	PASS	AR2=0.913;DR2=0.935;AF=0.593	GT:DS:GP	1|1:1.658:0.017,0.309,0.674	0|0:0:1,0,0	1|1:1.707:0.009,0.275,0.716	0|0:0:1,0,0	1|1:1.391:0.098,0.413,0.489	1|1:1.951:0.001,0.046,0.952	1|1:1.309:0.12,0.452,0.429	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.913:0.002,0.083,0.915	1|1:1.902:0.003,0.093,0.904	1|1:1.932:0.001,0.066,0.933	1|1:2:0,0,1	0|1:1.523:0.058,0.362,0.58	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.571:0.051,0.326,0.623	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.478:0.064,0.395,0.541	1|1:1.385:0.094,0.427,0.479	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.909:0.002,0.087,0.911	1|1:1.26:0.146,0.448,0.406	1|1:1.829:0.006,0.159,0.835	1|1:2:0,0,1	1|1:1.302:0.121,0.456,0.423	1|1:2:0,0,1	1|1:1.932:0.001,0.065,0.933	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.349:0.098,0.456,0.446	1|1:2:0,0,1	1|1:1.578:0.051,0.321,0.628	1|1:1.968:0.001,0.031,0.968	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:1.577:0.047,0.329,0.624	1|1:1.844:0.01,0.136,0.854	1|1:1.54:0.041,0.377,0.581	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.861:0.007,0.126,0.868	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.6:0.045,0.309,0.645	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.598:0.033,0.337,0.631	0|1:1.182:0.138,0.543,0.32	1|1:1.935:0.001,0.063,0.936	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.549:0.041,0.368,0.59	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.517:0.064,0.356,0.581	1|0:1:0,1,0	1|1:1.405:0.088,0.42,0.493	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.71:0.021,0.247,0.731	0|0:0:1,0,0	1|1:1.948:0.001,0.05,0.949	0|0:0:1,0,0	1|1:1.839:0.001,0.158,0.841	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.753:0.016,0.214,0.769	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.879:0.004,0.113,0.883	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.491:0.068,0.373,0.559	1|1:2:0,0,1	1|1:1.864:0.004,0.129,0.867	1|1:1.84:0.003,0.153,0.844	1|1:1.671:0.012,0.305,0.683	1|1:1.976:0,0.024,0.976	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.862:0.004,0.13,0.866	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.938:0.001,0.06,0.939	0|0:0:1,0,0	1|0:1.508:0.065,0.362,0.573	1|1:1.821:0.008,0.163,0.829	1|1:1.8:0.008,0.185,0.807	1|1:1.647:0.025,0.303,0.672	1|0:1.439:0.082,0.397,0.521	1|1:1.94:0.001,0.058,0.941	1|1:1.999:0,0.001,0.999	0|1:1.56:0.011,0.419,0.571	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.946:0.001,0.053,0.947	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.83:0.011,0.149,0.84	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.85:0.005,0.14,0.855	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.345:0.096,0.463,0.441	1|1:1.791:0.004,0.201,0.795	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.681:0.018,0.283,0.699	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.822:0.008,0.162,0.83	1|1:1.383:0.099,0.418,0.483	1|1:1.846:0.006,0.142,0.852	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.718:0.028,0.226,0.746	1|1:2:0,0,1	1|1:1.943:0.001,0.056,0.943	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.937:0.001,0.061,0.938	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.979:0.001,0.02,0.98	1|1:2:0,0,1	1|1:1.924:0.004,0.067,0.929	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	18068263	SNP-3.18067044.	C	A	.	PASS	AR2=0.981;DR2=0.982;AF=0.443	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:0.971:0.265,0.499,0.236	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.949:0.277,0.498,0.226	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.745:0.399,0.456,0.145	0|1:1:0,1,0	1|0:0.933:0.284,0.499,0.217	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.197:0.851,0.1,0.049	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.969:0.266,0.499,0.235	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.97:0.265,0.499,0.235	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.967:0.267,0.499,0.234	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18068326	SNP-3.18067107.	A	G	.	PASS	AR2=0.994;DR2=0.995;AF=0.28	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.869:0.003,0.125,0.872	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.829:0.006,0.158,0.836	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.878:0.003,0.115,0.881	0|1:1:0,1,0	1|1:1.942:0.001,0.056,0.943	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.954:0.001,0.044,0.955	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.952,0.047,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.506:0.05,0.393,0.557	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18068469	SNP-3.18067250.	A	G	.	PASS	AR2=0.992;DR2=0.992;AF=0.228	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.911:0.002,0.085,0.913	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.041:0.96,0.038,0.001	1|0:1:0,1,0	1|1:1.924:0.002,0.073,0.925	1|0:0.894:0.26,0.585,0.155	1|0:1:0,1,0	1|1:1.924:0.001,0.073,0.925	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.847:0.005,0.143,0.852	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.041:0.96,0.038,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.848:0.008,0.137,0.855	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.864:0.005,0.126,0.869	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.939:0.001,0.059,0.94	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.871:0.005,0.119,0.876	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18068608	SNP-3.18067389.	A	G	.	PASS	AR2=0.995;DR2=0.996;AF=0.24	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.969:0,0.031,0.969	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.94:0.001,0.058,0.941	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.208:0.802,0.187,0.011	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.149:0.854,0.143,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.275:0.738,0.249,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.931:0.001,0.066,0.932	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18069083	SNP-3.18067864.	C	A	.	PASS	AR2=0.994;DR2=0.996;AF=0.384	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.616:0.399,0.587,0.015	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.857:0,0.143,0.857	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.378:0.658,0.307,0.035	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.112:0.891,0.106,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.102:0.9,0.097,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.095:0.908,0.09,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18069191	SNP-3.18067972.	A	G	.	PASS	AR2=0.915;DR2=0.936;AF=0.231	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.514:0.028,0.429,0.543	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.346:0.684,0.286,0.03	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.746:0.352,0.55,0.098	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.367:0.667,0.299,0.034	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.355:0.677,0.292,0.032	0|0:0:1,0,0	0|0:0.362:0.671,0.296,0.033	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.357:0.675,0.293,0.032	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.236:0.766,0.232,0.002	0|0:0.031:0.969,0.031,0	1|1:2:0,0,1	0|0:0.04:0.96,0.04,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.948,0.051,0.001	0|0:0:1,0,0	1|0:0.833:0.232,0.703,0.065	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.197:0.1,0.604,0.296	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.516:0.565,0.354,0.081	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.725:0.33,0.614,0.055	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.375:0.639,0.346,0.015	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.881:0,0.119,0.881	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.846:0.187,0.781,0.033	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.124:0.894,0.089,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.062:0.193,0.551,0.256	0|0:0.22:0.797,0.185,0.017	0|0:0:1,0,0	0|1:1.006:0.156,0.682,0.162	0|1:0.723:0.385,0.508,0.107	0|0:0.495:0.555,0.395,0.05	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.466:0.591,0.353,0.056	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.171:0.838,0.153,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.352:0.68,0.289,0.031	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.365:0.668,0.298,0.033	0|0:0.076:0.926,0.072,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.994:0.008,0.99,0.002	0|0:0.635:0.473,0.418,0.109	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.316:0.709,0.267,0.025	0|0:0.361:0.672,0.296,0.033	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.369:0.654,0.324,0.022	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.279:0.752,0.217,0.031	1|1:2:0,0,1	1|0:0.502:0.519,0.46,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.369:0.665,0.301,0.034	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.124:0.884,0.108,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.292:0.724,0.259,0.016	0|0:0.142:0.867,0.123,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.109:0.897,0.097,0.006	0|0:0.238:0.787,0.187,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.352:0.679,0.29,0.031	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18069653	SNP-3.18068434.	A	G	.	PASS	AR2=0.973;DR2=0.979;AF=0.233	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.947:0.001,0.051,0.948	0|0:0:1,0,0	1|1:1.911:0.004,0.082,0.915	0|0:0:1,0,0	1|1:1.627:0.018,0.337,0.645	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.788:0.008,0.195,0.796	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.663:0.027,0.282,0.691	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.95:0.001,0.049,0.95	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.474:0.011,0.503,0.485	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.958:0.001,0.041,0.959	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.945,0.054,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.087:0.915,0.083,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.262:0.755,0.228,0.017	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.233:0.774,0.219,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.219:0.79,0.2,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0.044:0.956,0.044,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.803:0.007,0.183,0.81	1|1:1.676:0.032,0.259,0.709	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.128:0.876,0.119,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.144:0.861,0.134,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.861:0.002,0.134,0.863	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.893:0.001,0.105,0.894	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.659:0.004,0.333,0.663	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.15:0.855,0.141,0.005	0|0:0.048:0.952,0.048,0	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0.174:0.834,0.159,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:1.85:0.007,0.137,0.856	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.975:0,0.025,0.975	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0
+3	18070684	SNP-3.18069465.	C	A	.	PASS	AR2=0.977;DR2=0.98;AF=0.35	GT:DS:GP	0|0:0.056:0.945,0.055,0	1|1:2:0,0,1	0|0:0.133:0.873,0.121,0.006	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.13:0.876,0.119,0.006	0|0:0:1,0,0	0|0:0.215:0.788,0.208,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.124:0.881,0.114,0.005	1|1:2:0,0,1	0|0:0.066:0.936,0.063,0.001	0|0:0.134:0.872,0.122,0.006	0|0:0:1,0,0	0|0:0.061:0.94,0.059,0.001	0|0:0:1,0,0	1|0:1.161:0.077,0.684,0.238	0|0:0.084:0.918,0.081,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.936,0.063,0.001	0|0:0.189:0.819,0.173,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.936,0.063,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.062:0.939,0.06,0.001	0|0:0:1,0,0	0|0:0.054:0.947,0.052,0.001	0|0:0.122:0.88,0.119,0.001	0|0:0:1,0,0	1|1:1.624:0.026,0.325,0.649	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.926,0.073,0.002	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.945,0.054,0.001	0|0:0.115:0.886,0.113,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.982:0,0.017,0.983	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.963:0,0.037,0.963	1|1:1.98:0,0.02,0.98	0|1:1.555:0.005,0.434,0.56	1|1:2:0,0,1	1|1:1.966:0,0.034,0.966	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0,0.025,0.975	0|0:0.061:0.939,0.061,0	1|1:2:0,0,1	0|0:0.227:0.776,0.221,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.121:0.879,0.12,0.001	0|0:0:1,0,0	1|1:1.969:0,0.031,0.969	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.936:0,0.063,0.936	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.914:0.001,0.084,0.915	1|1:2:0,0,1	1|1:1.856:0.002,0.141,0.858	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.929:0.002,0.066,0.932	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0.053:0.947,0.052,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0.034:0.966,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.936,0.063,0.001	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.065:0.936,0.063,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.137:0.865,0.133,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.947,0.052,0.001	1|1:1.908:0.002,0.087,0.911	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.932,0.067,0.001	0|0:0.088:0.913,0.086,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.906:0.003,0.088,0.909	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.066:0.936,0.063,0.001	1|1:2:0,0,1	0|0:0.066:0.936,0.063,0.001	0|0:0.066:0.936,0.063,0.001	0|0:0.074:0.928,0.071,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.015:0.985,0.014,0	0|0:0.022:0.978,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.921:0.002,0.076,0.922	0|0:0:1,0,0
+3	18071668	SNP-3.18070449.	C	A	.	PASS	AR2=0.983;DR2=0.986;AF=0.357	GT:DS:GP	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.982:0,0.017,0.982	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.922:0.002,0.075,0.924	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.033:0.967,0.032,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.02:0.98,0.019,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.049:0.952,0.048,0.001	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.968,0.032,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.95,0.05,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.056:0.945,0.054,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.802:0,0.198,0.802	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.919:0.001,0.079,0.92	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.114:0.891,0.104,0.005	1|1:2:0,0,1	0|0:0.044:0.957,0.042,0.001	1|1:2:0,0,1	0|0:0.166:0.847,0.141,0.012	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.4:0.634,0.332,0.034	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.959,0.041,0.001	0|0:0.222:0.796,0.185,0.018	0|0:0.054:0.946,0.053,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.033:0.967,0.032,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.141:0.864,0.13,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.042:0.959,0.041,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.257:0.779,0.184,0.037	0|0:0.035:0.965,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.894:0.003,0.099,0.897	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.948,0.05,0.002	0|0:0:1,0,0	0|0:0.033:0.968,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.16:0.848,0.145,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.077:0.924,0.075,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.943,0.056,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.434:0.597,0.371,0.032	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.958,0.041,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.113:0.893,0.101,0.006	0|0:0:1,0,0	0|0:0.036:0.965,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.022:0.978,0.021,0.001	0|0:0.125:0.88,0.116,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18074088	SNP-3.18072869.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.367	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.911:0.002,0.086,0.912	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.961,0.039,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.896:0.002,0.1,0.898	1|1:1.911:0,0.089,0.911	1|1:2:0,0,1	0|0:0.02:0.98,0.019,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.946:0.001,0.052,0.947	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:1.977:0,0.022,0.977	1|1:1.926:0.001,0.072,0.927	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.938:0.001,0.06,0.939	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.34:0.079,0.501,0.42	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.96:0,0.04,0.96	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.845:0.009,0.136,0.855	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.964:0.001,0.034,0.965	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18076201	SNP-3.18074982.	A	G	.	PASS	AR2=0.972;DR2=0.977;AF=0.331	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.791:0.014,0.181,0.805	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.699:0.023,0.255,0.722	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.809:0.011,0.169,0.82	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.711:0.021,0.247,0.732	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.78:0.012,0.196,0.792	1|0:1:0,1,0	0|1:0.865:0.175,0.784,0.041	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.02:0.98,0.019,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.779:0.02,0.182,0.798	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.705:0.022,0.252,0.727	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.071:0.93,0.069,0.001	1|1:2:0,0,1	1|1:1.742:0.017,0.224,0.759	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1.029:0.015,0.942,0.043	0|0:0:1,0,0	1|1:1.775:0.011,0.202,0.786	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.694:0.024,0.259,0.717	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.679:0.026,0.269,0.705	1|1:1.709:0.021,0.248,0.73	1|1:1.774:0.013,0.201,0.787	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.605:0.043,0.309,0.648	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.593:0.047,0.313,0.64	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.882:0.005,0.109,0.887	1|1:1.533:0.057,0.352,0.591	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.935:0.005,0.056,0.94	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.031:0.97,0.03,0	1|1:2:0,0,1
+3	18076436	SNP-3.18075217.	C	A	.	PASS	AR2=0.977;DR2=0.984;AF=0.422	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.867:0.001,0.13,0.868	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:0.432:0.615,0.338,0.047	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.975,0.025,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.371:0.663,0.302,0.035	0|0:0.394:0.645,0.317,0.039	0|0:0.361:0.669,0.3,0.031	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.572:0.503,0.421,0.075	0|0:0:1,0,0	0|0:0.084:0.918,0.079,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.768:0.015,0.202,0.783	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.052:0.949,0.05,0.001	0|0:0.237:0.764,0.236,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.35:0.69,0.27,0.04	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.09:0.91,0.09,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.425:0.621,0.333,0.046	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.433:0.614,0.338,0.047	0|0:0.433:0.614,0.338,0.048	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0.025:0.975,0.024,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.027,0.001	1|1:2:0,0,1	1|1:2:0,0,1
+3	18078290	SNP-3.18077071.	C	A	.	PASS	AR2=0.991;DR2=0.993;AF=0.318	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.762:0.013,0.212,0.775	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.636:0.036,0.292,0.672	1|1:2:0,0,1	1|1:1.784:0.007,0.201,0.792	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.911:0.001,0.088,0.911	1|1:2:0,0,1	1|1:1.806:0.006,0.182,0.812	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.76:0.247,0.746,0.007	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.881:0.002,0.116,0.883	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.865:0.004,0.126,0.87	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.984:0,0.015,0.985	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.874:0.006,0.114,0.88	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18079786	SNP-3.18078567.	A	G	.	PASS	AR2=0.979;DR2=0.983;AF=0.387	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.929:0.001,0.069,0.93	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.777:0.034,0.155,0.811	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.925:0.001,0.072,0.927	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.464:0.135,0.266,0.599	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.923:0.002,0.074,0.925	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.915:0.002,0.081,0.917	1|1:1.855:0.011,0.122,0.866	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.968:0.001,0.03,0.969	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.629:0.063,0.245,0.692	0|1:0.958:0.137,0.768,0.095	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.863:0.011,0.115,0.874	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.803:0.009,0.179,0.812	1|1:1.922:0.002,0.074,0.924	0|1:0.894:0.307,0.491,0.201	1|1:1.925:0.001,0.072,0.927	1|1:1.925:0.001,0.072,0.927	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.925:0.001,0.072,0.927	0|0:0.012:0.988,0.012,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.929:0.001,0.069,0.93	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.919:0.002,0.078,0.921	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.874:0.004,0.118,0.878	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.142:0.859,0.141,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.818:0.009,0.164,0.827	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.866:0.011,0.112,0.877	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.018:0.982,0.018,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.611:0.03,0.329,0.641	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	18079936	SNP-3.18078717.	C	A	.	PASS	AR2=0.993;DR2=0.993;AF=0.354	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.977:0.001,0.022,0.978	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.921:0.292,0.495,0.213	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.921:0.292,0.495,0.213	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.921:0.292,0.495,0.213	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18080256	SNP-3.18079037.	C	A	.	PASS	AR2=0.989;DR2=0.992;AF=0.307	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.74:0.013,0.235,0.753	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.414:0.088,0.409,0.503	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.665:0.012,0.31,0.677	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.815:0.185,0.815,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.755:0.015,0.214,0.77	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.355:0.677,0.291,0.032	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18080395	SNP-3.18079176.	C	A	.	PASS	AR2=0.969;DR2=0.978;AF=0.274	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.017:0.984,0.016,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.466:0.053,0.428,0.519	0|1:1.164:0.107,0.623,0.271	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.923:0.001,0.074,0.924	1|0:1:0,1,0	0|1:1.028:0.234,0.503,0.263	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:0.671:0.329,0.671,0	1|1:1.913:0.002,0.083,0.915	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.589:0.043,0.326,0.632	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.807:0.011,0.17,0.819	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	0|1:1:0,1,0	1|1:1.44:0.047,0.466,0.487	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.423:0.062,0.454,0.485	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.425:0.084,0.406,0.509	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.645:0.006,0.343,0.651	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.924:0.001,0.074,0.925	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.911:0.003,0.083,0.914	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.726:0.006,0.262,0.732	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.904:0.003,0.089,0.907	0|0:0:1,0,0
+3	18080830	SNP-3.18079611.	C	A	.	PASS	AR2=0.97;DR2=0.97;AF=0.453	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:1:0.25,0.5,0.25	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1.017:0.242,0.499,0.259	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:1:0.25,0.5,0.25	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:0.998:0.251,0.5,0.249	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.002:0,0.998,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.001:0.249,0.5,0.251	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1.001:0.25,0.5,0.25	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0.25,0.5,0.25	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.001:0.25,0.5,0.25	1|1:2:0,0,1	1|0:1.001:0.25,0.5,0.25	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0.25,0.5,0.25	1|1:1:0.25,0.5,0.25	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0.25,0.5,0.25	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18080836	SNP-3.18079617.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.242	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.949:0,0.051,0.949	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0.01:0.99,0.01,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.01:0.99,0.009,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.277:0.763,0.198,0.039	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18081440	SNP-3.18080221.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.356	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.107:0.896,0.101,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18082040	SNP-3.18080821.	C	A	.	PASS	AR2=0.929;DR2=0.946;AF=0.387	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.766:0.035,0.164,0.801	0|0:0.152:0.855,0.138,0.007	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.324:0.739,0.199,0.063	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.244:0.145,0.466,0.389	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.353:0.678,0.291,0.031	0|0:0.198:0.811,0.179,0.01	0|0:0:1,0,0	0|0:0.18:0.829,0.162,0.009	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.128:0.877,0.117,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.828:0.213,0.747,0.04	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.838:0.028,0.105,0.866	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.207:0.807,0.178,0.014	0|1:1.273:0.159,0.41,0.432	0|0:0:1,0,0	0|1:0.761:0.363,0.512,0.124	0|1:1.252:0.073,0.601,0.326	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.881:0.003,0.114,0.883	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.967,0.033,0	0|0:0:1,0,0	1|0:1.49:0.061,0.388,0.551	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.378:0.641,0.341,0.019	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0.542:0.527,0.405,0.068	1|0:0.981:0.278,0.464,0.259	1|1:2:0,0,1	0|1:0.864:0.31,0.517,0.174	0|0:0:1,0,0	0|0:0.057:0.945,0.052,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.834:0.328,0.51,0.162	0|0:0:1,0,0	0|1:0.328:0.683,0.306,0.011	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.201:0.807,0.184,0.009	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.215:0.129,0.527,0.344	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.662:0.025,0.289,0.687	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.177:0.831,0.161,0.008	0|0:0.162:0.845,0.147,0.008	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.17:0.094,0.642,0.264	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.729:0.017,0.237,0.746	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.969:0.001,0.03,0.97	1|1:1.65:0.023,0.304,0.673	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.857:0.007,0.129,0.864	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.763:0.014,0.208,0.777	1|1:2:0,0,1	1|1:1.211:0.206,0.377,0.417	0|0:0:1,0,0	0|1:0.664:0.429,0.478,0.093	0|1:0.59:0.451,0.508,0.041	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.398:0.684,0.234,0.082	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.17:0.836,0.157,0.007	1|1:1.399:0.132,0.337,0.531	1|1:1.839:0.029,0.104,0.868	1|1:1.851:0.027,0.094,0.878	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.877:0.004,0.115,0.881	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.763:0.014,0.208,0.777	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.774:0.015,0.196,0.789
+3	18082263	SNP-3.18081044.	A	G	.	PASS	AR2=1;DR2=1;AF=0.356	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	18082361	SNP-3.18081142.	A	G	.	PASS	AR2=0.971;DR2=0.98;AF=0.44	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.166:0.841,0.152,0.007	1|1:1.915:0.002,0.082,0.916	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:1.937:0.001,0.061,0.938	0|0:0.631:0.466,0.437,0.097	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.937:0.001,0.061,0.938	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.937:0.001,0.061,0.938	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.93:0.487,0.095,0.418	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.778:0.013,0.196,0.791	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.851:0.007,0.135,0.858	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:1.823:0.007,0.162,0.831	0|0:0.026:0.974,0.025,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.528:0.482,0.507,0.01	0|0:0.032:0.968,0.032,0	1|1:1.999:0,0.001,0.999	0|0:0.027:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.159:0.848,0.146,0.006	0|0:0.14:0.864,0.131,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.159:0.847,0.146,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.159:0.848,0.146,0.006	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.174:0.834,0.158,0.008	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.935:0.005,0.054,0.94	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0.517:0.552,0.38,0.069	1|1:2:0,0,1	1|0:1.199:0.041,0.718,0.241	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.937:0.001,0.061,0.938	0|0:0.131:0.873,0.123,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:1.937:0.001,0.061,0.938	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.991:0,0.008,0.991	0|0:0:1,0,0	0|0:0.489:0.568,0.376,0.057	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.937:0.001,0.061,0.938	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.896:0.003,0.098,0.899	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.154:0.852,0.142,0.006	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18083205	SNP-3.18081986.	A	G	.	PASS	AR2=1;DR2=1;AF=0.302	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18083836	SNP-3.18082617.	C	A	.	PASS	AR2=0.979;DR2=0.983;AF=0.303	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0.037:0.963,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.886:0.003,0.107,0.89	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.95:0.001,0.048,0.951	1|1:2:0,0,1	1|1:1.718:0.02,0.242,0.738	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.703:0.025,0.247,0.728	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.706:0.022,0.251,0.727	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.722:0.02,0.239,0.742	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.826:0.012,0.151,0.837	0|0:0:1,0,0	1|1:1.744:0.017,0.223,0.76	0|0:0:1,0,0	1|1:1.691:0.024,0.261,0.715	0|1:1.361:0.065,0.508,0.426	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.808:0.008,0.175,0.816	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.875:0.004,0.118,0.878	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.805:0.012,0.171,0.817	1|1:1.764:0.014,0.209,0.777	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.677:0.026,0.271,0.703	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.94:0.001,0.058,0.941	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.915:0.001,0.082,0.917	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.831:0.007,0.154,0.838	0|0:0:1,0,0
+3	18083935	SNP-3.18082716.	A	G	.	PASS	AR2=0.99;DR2=0.992;AF=0.352	GT:DS:GP	1|1:1.783:0.012,0.194,0.794	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.074:0.928,0.071,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.074:0.927,0.071,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.796:0.007,0.189,0.804	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.793:0.011,0.185,0.804	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.851:0.007,0.135,0.858	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.79:0.011,0.188,0.801	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.795:0.011,0.183,0.806	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.063:0.003,0.932,0.065	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.788:0.011,0.189,0.799	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.8:0.01,0.18,0.81	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.922,0.077,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.922,0.077,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	18084528	SNP-3.18083309.	C	A	.	PASS	AR2=0.951;DR2=0.961;AF=0.476	GT:DS:GP	0|0:0.091:0.912,0.086,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.532:0.505,0.458,0.037	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.452:0.566,0.416,0.018	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.128:0.877,0.119,0.004	0|0:0:1,0,0	0|0:0.158:0.848,0.146,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.1:0.903,0.095,0.002	0|0:0.153:0.853,0.141,0.006	0|0:0.936:0.286,0.491,0.223	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.247:0.768,0.216,0.015	0|0:0:1,0,0	0|0:0.142:0.864,0.131,0.005	0|0:0:1,0,0	1|1:1.985:0,0.015,0.985	0|0:0.042:0.959,0.039,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.265:0.756,0.223,0.021	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.181:0.83,0.158,0.011	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.1:0.903,0.095,0.002	0|0:0:1,0,0	0|0:0.195:0.813,0.178,0.009	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.94:0,0.06,0.94	1|1:1.991:0,0.009,0.991	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.419:0.119,0.342,0.539	1|1:2:0,0,1	1|1:1.984:0,0.016,0.984	1|1:1.996:0,0.004,0.996	0|0:0.286:0.737,0.24,0.023	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.136:0.868,0.128,0.004	1|1:1.972:0,0.028,0.972	0|0:0:1,0,0	1|0:1.05:0,0.95,0.05	1|1:2:0,0,1	0|0:0.198:0.809,0.183,0.008	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.028:0.006,0.959,0.034	1|1:1.719:0.022,0.237,0.741	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.708:0.018,0.255,0.727	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.151:0.854,0.142,0.005	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.639:0.485,0.391,0.124	0|0:0.576:0.474,0.476,0.05	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.783:0.295,0.627,0.078	0|0:0:1,0,0	0|1:1.198:0.138,0.526,0.336	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.035:0.222,0.521,0.257	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.011,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.101:0.901,0.096,0.003	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	0|1:1.088:0.155,0.602,0.243	0|0:0.092:0.91,0.087,0.002	1|0:1.052:0.144,0.661,0.195	1|1:2:0,0,1	0|0:0.15:0.856,0.139,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.092:0.91,0.087,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.158:0.848,0.146,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.455:0.014,0.518,0.468	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.151:0.855,0.139,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.044:0.956,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.111:0.892,0.105,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.557:0.04,0.363,0.597	1|1:1.938:0,0.062,0.938	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.002:0.292,0.413,0.294	1|1:2:0,0,1
+3	18084790	SNP-3.18083571.	C	A	.	PASS	AR2=0.991;DR2=0.993;AF=0.314	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.837:0.006,0.151,0.843	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.724:0.013,0.251,0.736	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:0.892:0.109,0.889,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.872:0.005,0.117,0.877	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.842:0.007,0.143,0.85	1|1:1.722:0.015,0.247,0.738	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.824:0.008,0.16,0.832	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.836:0.007,0.149,0.844	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.843:0.007,0.143,0.85	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.948:0,0.051,0.948	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.026,0.974	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18085078	SNP-3.18083859.	C	A	.	PASS	AR2=0.995;DR2=0.996;AF=0.323	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.814:0.001,0.185,0.815	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.969:0.001,0.03,0.97	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.081:0.081,0.757,0.162	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.026,0.974	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0.001,0.031,0.968	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.852:0.001,0.147,0.852	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.288:0.713,0.286,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.922:0.002,0.075,0.924	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.919:0.002,0.078,0.92	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.989:0,0.011,0.989	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18086336	SNP-3.18085117.	A	G	.	PASS	AR2=0.993;DR2=0.994;AF=0.34	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.082:0.92,0.078,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.009:0.992,0.008,0	0|1:1:0,1,0	0|0:0.112:0.892,0.104,0.004	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.308:0.71,0.273,0.018	1|0:1.027:0.002,0.969,0.029	0|0:0:1,0,0	0|0:0.081:0.921,0.077,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.131:0.874,0.122,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.087:0.913,0.086,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.276:0.005,0.713,0.282	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.039:0.962,0.037,0.001	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.052:0.949,0.05,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	1|1:2:0,0,1	0|0:0.286:0.721,0.273,0.007	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	18087754	SNP-3.18086535.	C	A	.	PASS	AR2=1;DR2=1;AF=0.43	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0
+3	18088128	SNP-3.18086909.	A	G	.	PASS	AR2=0.969;DR2=0.977;AF=0.242	GT:DS:GP	1|1:1.659:0.03,0.281,0.689	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.625:0.035,0.305,0.66	1|0:1:0,1,0	1|1:1.557:0.05,0.343,0.607	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.55:0.05,0.349,0.601	1|1:1.701:0.023,0.253,0.724	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.62:0.038,0.305,0.658	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.567:0.047,0.338,0.614	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.609:0.037,0.317,0.646	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.665:0.03,0.274,0.695	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.723:0.019,0.238,0.743	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.805:0.014,0.168,0.819	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.681:0.024,0.271,0.705	1|1:1.753:0.016,0.215,0.769	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.843:0.009,0.139,0.852	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0
+3	18091827	SNP-3.18090608.	C	A	.	PASS	AR2=0.995;DR2=0.995;AF=0.333	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0.048:0.953,0.046,0.001	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.855:0,0.145,0.855	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.047:0.953,0.046,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.714:0.098,0.09,0.812	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.249:0.772,0.208,0.02	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18094199	SNP-3.18092980.	C	A	.	PASS	AR2=0.993;DR2=0.994;AF=0.303	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.816:0.009,0.167,0.825	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.818:0.009,0.165,0.826	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.844:0.006,0.145,0.85	1|1:1.805:0.01,0.176,0.814	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.798:0.01,0.181,0.809	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.797:0.01,0.183,0.807	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.89:0.005,0.1,0.895	1|1:1.814:0.009,0.168,0.823	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18095781	SNP-3.18094562.	C	A	.	PASS	AR2=0.97;DR2=0.971;AF=0.482	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1.093:0.207,0.494,0.3	0|0:0:1,0,0	0|1:1.076:0.212,0.5,0.288	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.08:0.212,0.497,0.292	0|1:1:0,1,0	1|0:1.037:0.233,0.497,0.27	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1.093:0.207,0.494,0.3	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.093:0.207,0.494,0.3	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1.093:0.207,0.494,0.3	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.066:0.219,0.497,0.284	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.064:0.22,0.497,0.283	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.093:0.207,0.494,0.3	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.037:0.233,0.497,0.27	1|1:2:0,0,1	1|0:1.037:0.233,0.497,0.27	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18098167	SNP-3.18096948.	C	A	.	PASS	AR2=0.983;DR2=0.985;AF=0.34	GT:DS:GP	0|0:0.062:0.939,0.06,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.074:0.928,0.07,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.103:0.9,0.097,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.112:0.89,0.107,0.003	0|0:0:1,0,0	0|0:0.096:0.907,0.09,0.003	0|0:0.13:0.875,0.121,0.004	0|0:0:1,0,0	0|0:0.205:0.805,0.185,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.93,0.069,0.001	0|0:0.058:0.943,0.056,0.001	0|0:0.091:0.911,0.087,0.002	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.165:0.841,0.152,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.954,0.046,0.001	1|1:2:0,0,1	0|0:0.026:0.974,0.026,0	0|0:0.007:0.993,0.007,0	0|0:0.134:0.871,0.125,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.935,0.065,0	0|0:0.114:0.889,0.108,0.003	0|0:0:1,0,0	0|0:0.149:0.856,0.138,0.006	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.828:0.016,0.141,0.844	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.878:0,0.122,0.878	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.222:0.788,0.202,0.01	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.171:0.837,0.154,0.009	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.874:0,0.126,0.874	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.196:0.813,0.177,0.009	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.046:0.954,0.045,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.949,0.051,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.12:0.884,0.112,0.004	0|0:0:1,0,0	0|0:0.096:0.907,0.09,0.003	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.147:0.859,0.136,0.005	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.115:0.889,0.108,0.004	0|0:0:1,0,0	0|0:0.046:0.954,0.045,0	0|0:0.015:0.985,0.015,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.147:0.86,0.134,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18098474	SNP-3.18097255.	C	A	.	PASS	AR2=0.995;DR2=0.997;AF=0.342	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.533:0.544,0.379,0.077	0|0:0.042:0.959,0.041,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.219:0.797,0.187,0.016	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.99:0,0.009,0.99	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18100013	SNP-3.18098794.	A	G	.	PASS	AR2=0.848;DR2=0.879;AF=0.227	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.808:0.353,0.486,0.161	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.733:0.398,0.471,0.131	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.856:0.326,0.492,0.182	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.81:0.354,0.482,0.164	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.838:0.335,0.492,0.173	1|0:0.816:0.357,0.47,0.173	1|1:2:0,0,1	0|1:0.879:0.314,0.494,0.192	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.415:0.631,0.323,0.046	0|0:0.27:0.751,0.228,0.021	1|1:2:0,0,1	0|0:0.31:0.72,0.25,0.03	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.349:0.686,0.279,0.035	0|0:0.408:0.632,0.328,0.04	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.468:0.553,0.426,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.307:0.72,0.253,0.027	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.653:0.447,0.454,0.1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0.168:0.845,0.141,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.58:0.493,0.434,0.073	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.511:0.541,0.407,0.052	1|0:0.497:0.555,0.393,0.052	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.636:0.453,0.458,0.089	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.156:0.848,0.149,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.327:0.703,0.267,0.03	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.417:0.644,0.296,0.06	0|0:0:1,0,0	0|0:0.302:0.727,0.245,0.028	0|0:0.295:0.729,0.247,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.525:0.519,0.436,0.044	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.191:0.242,0.325,0.433	1|1:2:0,0,1	1|0:0.745:0.407,0.442,0.152	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.454:0.584,0.378,0.038	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.886:0.31,0.494,0.196	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.886:0.31,0.494,0.196	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.886:0.31,0.494,0.196	0|0:0:1,0,0	1|0:0.827:0.342,0.49,0.169	1|1:0.869:0.319,0.492,0.189	0|0:0.267:0.756,0.221,0.023	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.393:0.007,0.593,0.4	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.783:0.365,0.486,0.149	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.609:0.447,0.496,0.056	1|0:1.088:0.086,0.741,0.173	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.954:0.28,0.486,0.234	1|1:2:0,0,1	0|0:0.408:0.633,0.327,0.04	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.366:0.675,0.283,0.041	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:0.888:0.31,0.493,0.197	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.886:0.31,0.495,0.195	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.248:0.198,0.356,0.446	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.817:0.355,0.473,0.172	0|0:0:1,0,0	0|1:0.947:0.317,0.42,0.264	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.891:0.307,0.495,0.198	0|0:0.037:0.964,0.035,0.001	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.029:0.972,0.028,0	0|1:0.836:0.268,0.629,0.103
+3	18101093	SNP-3.18099874.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.317	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.976:0,0.024,0.976	1|1:1.977:0,0.022,0.978	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.979:0,0.02,0.979	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.982:0,0.018,0.982	0|0:0:1,0,0	1|1:1.98:0,0.02,0.98	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18101803	SNP-3.18100584.	A	G	.	PASS	AR2=0.991;DR2=0.992;AF=0.334	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0.064:0.937,0.061,0.001	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0.035:0.965,0.035,0	0|0:0.015:0.986,0.014,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0.077:0.927,0.07,0.003	0|0:0.041:0.96,0.039,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.072:0.932,0.065,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.077:0.927,0.07,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.158:0.848,0.146,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.934,0.063,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.031:0.97,0.03,0	1|1:2:0,0,1	0|0:0.061:0.94,0.059,0.001	0|0:0.019:0.981,0.018,0	0|0:0.027:0.973,0.027,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:1.972:0.001,0.026,0.973	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.077:0.927,0.07,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:1.961:0,0.039,0.961	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.015:0.985,0.014,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.078:0.925,0.071,0.003	0|0:0:1,0,0	0|0:0.041:0.96,0.039,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.076:0.927,0.07,0.003	1|1:1.958:0,0.042,0.958	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.023:0.978,0.022,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.229:0.798,0.175,0.027	0|0:0:1,0,0	0|0:0.03:0.97,0.029,0	0|0:0.061:0.94,0.059,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.03:0.97,0.03,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.076:0.927,0.069,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.97,0.03,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.992:0,0.007,0.992	0|0:0.073:0.93,0.066,0.003	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	18102046	SNP-3.18100827.	A	G	.	PASS	AR2=0.994;DR2=0.994;AF=0.243	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.055:0.946,0.054,0.001	0|0:0.141:0.872,0.116,0.013	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0.003:0.997,0.003,0	0|0:0.056:0.945,0.054,0.001	0|0:0.05:0.951,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.056:0.944,0.055,0.001	0|0:0.056:0.945,0.054,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.051,0.001	0|0:0:1,0,0	0|0:0.056:0.944,0.055,0.001	0|0:0.056:0.944,0.055,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.059:0.942,0.058,0.001	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.034,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.98:0.02,0.98,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0.056:0.944,0.055,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.946,0.053,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.056:0.945,0.055,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.946,0.053,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.944,0.055,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.056:0.944,0.055,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18107278	SNP-3.18106059.	A	G	.	PASS	AR2=0.987;DR2=0.989;AF=0.265	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.97:0,0.029,0.971	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.112:0.89,0.107,0.002	0|0:0:1,0,0	0|0:0.159:0.847,0.146,0.007	0|0:0:1,0,0	0|0:0.057:0.944,0.055,0.001	0|0:0:1,0,0	0|0:0.038:0.963,0.037,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.146:0.859,0.136,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.252:0.772,0.203,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.087:0.914,0.084,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.964,0.036,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.122:0.883,0.113,0.005	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0.279:0.726,0.269,0.005	1|0:1:0,1,0	1|0:0.842:0.175,0.808,0.017	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.893:0.006,0.095,0.899	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.133:0.872,0.123,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.017:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.179:0.851,0.119,0.03	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.953:0.001,0.046,0.954	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.132:0.872,0.125,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.963,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0
+3	18108444	SNP-3.18107225.	C	A	.	PASS	AR2=1;DR2=1;AF=0.335	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18109625	SNP-3.18108406.	C	A	.	PASS	AR2=0.973;DR2=0.979;AF=0.409	GT:DS:GP	0|0:0.233:0.778,0.21,0.012	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.461:0.585,0.369,0.046	0|0:0.448:0.59,0.373,0.037	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.295:0.732,0.241,0.027	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.15:0.858,0.135,0.008	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.23:0.781,0.208,0.011	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.986:0.027,0.959,0.014	0|0:0:1,0,0	0|0:0.115:0.89,0.104,0.005	0|0:0.088:0.914,0.084,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.348:0.684,0.285,0.031	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.196:0.815,0.174,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.186:0.818,0.178,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.455:0.605,0.335,0.06	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1.132:0.054,0.759,0.186	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.218:0.793,0.196,0.011	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.3:0.704,0.291,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.048:0.953,0.047,0.001	0|0:0.008:0.992,0.008,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.318:0.708,0.266,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.302:0.728,0.242,0.03	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.218:0.794,0.195,0.011	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.261:0.759,0.22,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18110366	SNP-3.18109147.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.23	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0.037:0.963,0.037,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.025:0.975,0.024,0	0|0:0.05:0.952,0.046,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.957:0.043,0.957,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18111046	SNP-3.18109827.	A	G	.	PASS	AR2=1;DR2=1;AF=0.317	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	18112999	SNP-3.18111780.	C	A	.	PASS	AR2=0.989;DR2=0.99;AF=0.346	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.057:0.945,0.053,0.002	0|0:0:1,0,0	0|0:0.056:0.945,0.055,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0.255:0.761,0.223,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.077:0.923,0.077,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.093:0.911,0.086,0.003	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.011,0.988	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.887:0.002,0.109,0.889	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.127:0.877,0.118,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.949:0.001,0.05,0.95	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.87:0.005,0.121,0.874	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.02:0.981,0.019,0	0|0:0.049:0.952,0.047,0.001	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.017:0.983,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.008,0	1|1:2:0,0,1	0|0:0.026:0.974,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.937,0.062,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.05:0.951,0.048,0.001	0|0:0.035:0.965,0.035,0	0|0:0.229:0.784,0.204,0.013	1|1:2:0,0,1	0|0:0.115:0.889,0.108,0.003	0|0:0.066:0.935,0.065,0.001	0|0:0:1,0,0	0|0:0.02:0.981,0.019,0	0|0:0.126:0.878,0.118,0.004	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.106:0.897,0.1,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.966,0.033,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.932,0.066,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.129:0.876,0.12,0.004	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18117044	SNP-3.18115825.	C	A	.	PASS	AR2=1;DR2=1;AF=0.327	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18117720	SNP-3.18116501.	A	G	.	PASS	AR2=0.993;DR2=0.996;AF=0.218	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.797:0.01,0.182,0.808	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.447:0.04,0.473,0.487	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.108:0.896,0.1,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.89:0.003,0.104,0.893	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18123585	SNP-3.18122366.	C	A	.	PASS	AR2=1;DR2=1;AF=0.329	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18125023	SNP-3.18123804.	C	A	.	PASS	AR2=0.946;DR2=0.959;AF=0.403	GT:DS:GP	0|0:0.235:0.779,0.207,0.014	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.259:0.759,0.224,0.017	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.606:0.469,0.457,0.075	0|0:0.487:0.57,0.374,0.057	0|0:0.546:0.533,0.387,0.079	0|0:0.228:0.778,0.216,0.006	1|1:2:0,0,1	0|0:0.613:0.455,0.477,0.068	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.234:0.78,0.207,0.014	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.237:0.778,0.208,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.515:0.536,0.414,0.05	0|0:0.228:0.786,0.2,0.014	0|0:0.517:0.566,0.351,0.083	0|0:0:1,0,0	0|0:0.244:0.771,0.213,0.015	1|1:2:0,0,1	0|0:0.092:0.908,0.091,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.098:0.903,0.095,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.242:0.774,0.21,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.143:0.861,0.136,0.004	0|0:0.1:0.9,0.1,0	0|0:0.204:0.807,0.182,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.275:0.744,0.237,0.019	0|0:0:1,0,0	0|0:0.29:0.729,0.252,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.984:0,0.016,0.984	0|1:1.201:0.014,0.771,0.215	1|1:1.968:0,0.031,0.968	0|1:1.237:0.009,0.744,0.247	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.028,0.972	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:1.975:0,0.025,0.975	1|1:2:0,0,1	1|1:1.975:0,0.024,0.975	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.351:0.65,0.348,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.972:0,0.028,0.972	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0,0.031,0.969	1|1:2:0,0,1	1|1:1.936:0,0.063,0.937	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	0|0:0.284:0.736,0.243,0.02	0|0:0:1,0,0	0|0:0.148:0.858,0.137,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.151:0.855,0.139,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.249:0.767,0.217,0.016	0|0:0:1,0,0	0|0:0.312:0.703,0.282,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.259:0.758,0.225,0.017	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.719:0.377,0.527,0.096	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.202:0.807,0.185,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.713:0.431,0.426,0.144	0|0:0.314:0.709,0.268,0.023	0|0:0.202:0.809,0.181,0.01	0|0:0:1,0,0	0|0:0.186:0.819,0.176,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.176:0.832,0.16,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.136:0.868,0.127,0.005	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.932:0.002,0.065,0.934	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.966:0.001,0.033,0.966	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.238:0.777,0.208,0.015	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0,0.032,0.968	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.132:0.878,0.112,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18125204	SNP-3.18123985.	A	G	.	PASS	AR2=0.918;DR2=0.933;AF=0.547	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.551:0.048,0.352,0.6	0|0:0:1,0,0	1|1:1.893:0.003,0.1,0.897	1|1:2:0,0,1	1|1:1.717:0.023,0.236,0.741	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.554:0.048,0.35,0.602	1|1:1.697:0.022,0.259,0.719	1|1:1.696:0.027,0.251,0.723	0|0:0:1,0,0	1|1:1.835:0.002,0.16,0.837	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.919:0.002,0.077,0.921	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.795:0.007,0.19,0.803	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.911:0.002,0.085,0.913	1|1:1.767:0.022,0.189,0.789	1|1:1.917:0.002,0.079,0.919	1|1:2:0,0,1	1|1:1.899:0.003,0.096,0.901	1|1:2:0,0,1	1|1:1.627:0.018,0.337,0.645	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.829:0.006,0.159,0.835	1|0:1:0.255,0.491,0.255	1|1:1.809:0.011,0.169,0.82	1|1:1.996:0,0.004,0.996	0|1:1:0,1,0	1|0:1.113:0.12,0.646,0.234	1|1:1.996:0,0.004,0.996	1|0:1.348:0.022,0.608,0.37	0|1:1.237:0.162,0.438,0.399	1|1:2:0,0,1	1|1:1.668:0.017,0.299,0.685	1|1:1.717:0.025,0.233,0.742	0|0:0:1,0,0	1|1:1.606:0.048,0.299,0.653	1|1:1.684:0.006,0.303,0.691	0|0:0:1,0,0	0|1:1.354:0.079,0.489,0.433	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.171:0.174,0.481,0.345	1|1:1.918:0.002,0.078,0.92	0|0:1.172:0.174,0.481,0.345	1|1:1.956:0.001,0.043,0.956	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.151:0.1,0.649,0.251	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.652:0.02,0.308,0.672	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.932:0.001,0.067,0.932	1|1:1.531:0.051,0.368,0.581	1|1:1.777:0.018,0.186,0.795	1|1:1.853:0.003,0.141,0.856	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.285:0.101,0.513,0.386	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.696:0.368,0.567,0.065	0|0:0:1,0,0	1|1:1.672:0.032,0.263,0.705	0|0:0:1,0,0	1|1:1.976:0,0.023,0.976	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:0.848:0.354,0.444,0.202	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.928:0.001,0.07,0.929	1|1:2:0,0,1	1|1:1.863:0.005,0.127,0.868	1|0:1.427:0.081,0.412,0.507	1|0:1.48:0.035,0.45,0.515	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.909:0.002,0.087,0.911	1|1:1.82:0.013,0.154,0.833	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.897:0.003,0.096,0.9	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.705:0.028,0.24,0.733	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.002:0.251,0.497,0.252	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.882:0.008,0.101,0.89	1|1:2:0,0,1	1|1:1.612:0.036,0.316,0.648	0|1:0.692:0.373,0.562,0.065	1|1:2:0,0,1	1|1:1.923:0.001,0.074,0.925	1|1:1.531:0.062,0.345,0.593	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.969:0.228,0.575,0.197	1|1:1.842:0.007,0.145,0.848	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.961:0,0.038,0.961	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.912:0.002,0.084,0.914	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.596:0.02,0.364,0.616	1|1:2:0,0,1	0|1:1.565:0.033,0.369,0.598	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.109:0.194,0.503,0.303	1|1:1.873:0.004,0.118,0.878	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1
+3	18127525	SNP-3.18126306.	A	G	.	PASS	AR2=0.988;DR2=0.99;AF=0.221	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.974,0.026,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.132:0.868,0.132,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	1|1:1.948:0.003,0.047,0.951	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.879:0.004,0.113,0.883	1|1:1.711:0.019,0.251,0.73	1|1:1.848:0.007,0.139,0.854	1|1:1.89:0,0.109,0.891	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.896:0.002,0.1,0.898	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.824:0.007,0.161,0.831	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.031:0.969,0.031,0	1|1:1.721:0.02,0.239,0.741	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.897:0.004,0.096,0.901	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.828:0.002,0.168,0.83	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.98,0.02,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18129260	SNP-3.18128041.	A	G	.	PASS	AR2=0.998;DR2=0.999;AF=0.233	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.974:0,0.026,0.974	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.628:0.372,0.628,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18130823	SNP-3.18129604.	C	A	.	PASS	AR2=1;DR2=1;AF=0.337	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18130888	SNP-3.18129669.	C	A	.	PASS	AR2=0.999;DR2=1;AF=0.341	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.088:0.914,0.085,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.023:0,0.977,0.023	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18132049	SNP-3.18130830.	A	G	.	PASS	AR2=1;DR2=1;AF=0.321	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	18134289	SNP-3.18133070.	C	A	.	PASS	AR2=1;DR2=1;AF=0.329	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18137206	SNP-3.18135987.	C	A	.	PASS	AR2=0.997;DR2=0.997;AF=0.331	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.774:0.054,0.118,0.828	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.113:0.889,0.109,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.128:0.878,0.116,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.1:0,0.9,0.1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.979:0,0.021,0.979	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18137340	SNP-3.18136121.	C	A	.	PASS	AR2=1;DR2=1;AF=0.331	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18140715	SNP-3.18139496.	A	G	.	PASS	AR2=0.994;DR2=0.996;AF=0.329	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.449:0.615,0.321,0.064	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.079:0.924,0.074,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.535:0.466,0.533,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.212:0.788,0.212,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.036:0.965,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	18141261	SNP-3.18140042.	C	A	.	PASS	AR2=1;DR2=1;AF=0.331	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18141694	SNP-3.18140475.	A	G	.	PASS	AR2=0.992;DR2=0.994;AF=0.396	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.163:0.844,0.15,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.087:0.914,0.085,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.608:0.462,0.469,0.069	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.256:0.756,0.233,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.983:0.019,0.978,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.929,0.071,0	0|0:0:1,0,0	0|0:0.07:0.93,0.07,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.167:0.833,0.167,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.311:0.714,0.261,0.025	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	18143019	SNP-3.18141800.	C	A	.	PASS	AR2=0.983;DR2=0.987;AF=0.374	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.127:0.879,0.115,0.006	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.929,0.07,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.343:0.687,0.283,0.03	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.171:0.83,0.17,0.001	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.165:0.839,0.157,0.004	0|0:0:1,0,0	0|0:0.292:0.731,0.247,0.023	0|0:0.237:0.778,0.208,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.36:0.667,0.306,0.027	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.178:0.829,0.163,0.007	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.306:0.723,0.248,0.029	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.237:0.777,0.208,0.015	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.035:0.966,0.034,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.108:0.894,0.104,0.002	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.356:0.676,0.292,0.032	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.205:0.807,0.182,0.011	0|0:0:1,0,0	0|0:0.095:0.907,0.092,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18145208	SNP-3.18143989.	C	A	.	PASS	AR2=1;DR2=1;AF=0.311	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18147444	SNP-3.18146225.	C	A	.	PASS	AR2=0.992;DR2=0.993;AF=0.358	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.084:0.917,0.081,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0.083:0.918,0.081,0.001	1|0:1:0,1,0	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.151:0.855,0.139,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.298:0.708,0.287,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.944,0.055,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.098:0.904,0.095,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.94,0.06,0.001	0|0:0:1,0,0	0|0:0.053:0.948,0.051,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.015:0.985,0.015,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.057:0.944,0.055,0.001	1|0:0.727:0.399,0.476,0.126	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.042:0.959,0.041,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.06:0.941,0.058,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18148988	SNP-3.18147769.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.341	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.05,0.001	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.193:0.81,0.187,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18149311	SNP-3.18148092.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.329	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.936,0.063,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18149640	SNP-3.18148421.	A	G	.	PASS	AR2=0.983;DR2=0.987;AF=0.247	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.114:0.89,0.106,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.104:0.899,0.097,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.138:0.865,0.131,0.003	0|0:0:1,0,0	0|0:0.082:0.919,0.079,0.001	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0.157:0.849,0.146,0.005	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.955,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.106:0.898,0.098,0.004	0|0:0.048:0.953,0.046,0.001	0|0:0.052:0.948,0.051,0.001	0|1:1:0,1,0	0|0:0.078:0.923,0.076,0.001	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:1.549:0,0.451,0.549	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:1.976:0,0.023,0.976	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.076:0.925,0.073,0.002	0|1:1:0,1,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.035:0.002,0.961,0.037	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.002:0.006,0.986,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.229:0.78,0.21,0.01	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.067:0.934,0.065,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.047:0.954,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.104:0.899,0.098,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.906,0.092,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.117:0.888,0.108,0.005	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.011:0.989,0.01,0	0|0:0.064:0.937,0.062,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.952,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0.062:0.939,0.06,0.001	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0.514:0.5,0.486,0.014	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18151046	SNP-3.18149827.	A	G	.	PASS	AR2=0.994;DR2=0.995;AF=0.29	GT:DS:GP	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.963,0.036,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.879:0.004,0.113,0.883	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.914:0.008,0.07,0.922	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.783:0.013,0.192,0.796	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.97,0.03,0	0|0:0.03:0.97,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.056:0.945,0.055,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.958,0.042,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.926,0.072,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.018:0.982,0.018,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.91:0.001,0.088,0.911	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.942:0,0.058,0.942	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.932,0.066,0.001	1|1:2:0,0,1
+3	18151458	SNP-3.18150239.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.349	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.082:0.92,0.078,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.063:0.938,0.06,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18151506	SNP-3.18150287.	A	G	.	PASS	AR2=0.995;DR2=0.996;AF=0.304	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.941:0,0.058,0.942	1|1:1.991:0,0.009,0.991	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.97:0,0.03,0.97	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.978,0.022,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.482:0.68,0.157,0.162	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.926:0.002,0.07,0.928	1|1:2:0,0,1	1|1:1.96:0.001,0.038,0.961	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.976:0,0.024,0.976	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	18152715	SNP-3.18151496.	C	A	.	PASS	AR2=0.947;DR2=0.964;AF=0.243	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.014:0.986,0.014,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.492:0.073,0.363,0.565	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.078:0.922,0.078,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.344:0.095,0.467,0.438	0|0:0:1,0,0	1|0:1.453:0.036,0.474,0.49	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.83:0.007,0.155,0.838	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1.371:0.098,0.434,0.468	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.515:0.062,0.36,0.578	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.567:0.434,0.565,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.701:0.009,0.282,0.709	1|1:2:0,0,1	1|1:1.362:0.101,0.436,0.463	1|1:1.545:0.082,0.291,0.627	1|1:1.574:0.058,0.31,0.632	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.627:0.032,0.308,0.659	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.268:0.069,0.595,0.336	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.628:0.048,0.276,0.676	1|1:1.654:0.029,0.288,0.683	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.553:0.072,0.303,0.625	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.379:0.103,0.414,0.483	0|0:0:1,0,0
+3	18154695	SNP-3.18153476.	A	G	.	PASS	AR2=0.997;DR2=0.998;AF=0.299	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.414:0.006,0.574,0.42	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.152:0.848,0.152,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18158943	SNP-3.18157724.	C	A	.	PASS	AR2=0.866;DR2=0.886;AF=0.315	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.167:0.843,0.148,0.009	0|1:0.911:0.298,0.494,0.208	0|0:0:1,0,0	0|1:1.027:0.236,0.501,0.263	0|0:0:1,0,0	0|0:0.245:0.772,0.212,0.017	0|1:1.065:0.224,0.487,0.289	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.06:0.227,0.487,0.287	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.911:0.298,0.494,0.209	1|1:2:0,0,1	0|1:1.078:0.201,0.52,0.279	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.135:0.175,0.515,0.31	1|1:2:0,0,1	0|0:0.515:0.539,0.406,0.054	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.087:0.208,0.497,0.295	0|0:0:1,0,0	0|0:0.186:0.825,0.163,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.155:0.851,0.142,0.006	1|1:2:0,0,1	1|0:1.017:0.237,0.509,0.254	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.849:0.344,0.463,0.193	0|0:0.587:0.456,0.502,0.043	0|0:0:1,0,0	1|0:0.964:0.183,0.67,0.147	0|0:0.406:0.627,0.34,0.033	0|1:1.038:0.215,0.532,0.253	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.063:0.217,0.503,0.28	0|0:0:1,0,0	1|0:1.015:0.245,0.495,0.26	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.13:0.875,0.121,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.101:0.901,0.098,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:1.026:0.24,0.495,0.266	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.675:0.451,0.423,0.126	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.943,0.056,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.16:0.844,0.152,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.108:0.896,0.099,0.004	0|0:0.153:0.854,0.14,0.007	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.127:0.88,0.112,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.857:0,0.143,0.857	0|0:0.776:0.374,0.475,0.15	0|0:0.995:0.255,0.495,0.25	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.326:0.684,0.305,0.01	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.317:0.71,0.263,0.027	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.385:0.659,0.296,0.044	0|0:0.189:0.82,0.171,0.009	1|1:2:0,0,1	1|0:0.911:0.297,0.494,0.209	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.072:0.219,0.49,0.291	0|0:0:1,0,0	0|0:0.663:0.457,0.422,0.12	0|1:0.878:0.192,0.738,0.07	0|1:0.662:0.446,0.446,0.108	0|1:0.912:0.297,0.494,0.209	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.965:0.265,0.505,0.23	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.909:0.299,0.494,0.208	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.91:0.298,0.494,0.208	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.967:0.269,0.495,0.236	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.696:0.431,0.442,0.127	0|0:0:1,0,0	0|0:0.446:0.586,0.382,0.032	0|0:0.052:0.95,0.049,0.001	0|0:0:1,0,0	0|0:0.938:0.283,0.497,0.22	1|1:2:0,0,1	0|0:0.671:0.451,0.427,0.122	1|1:1.405:0.118,0.359,0.523	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.938:0.24,0.582,0.178	0|0:0.731:0.36,0.549,0.091	0|0:0:1,0,0	0|0:0.166:0.842,0.15,0.008	0|0:0.13:0.876,0.118,0.006	0|0:0:1,0,0	0|0:0.584:0.503,0.41,0.087	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.197:0.814,0.175,0.011	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.157:0.852,0.139,0.009	1|0:0.909:0.299,0.494,0.208	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.102:0.901,0.096,0.003	0|0:0:1,0,0	0|1:0.517:0.49,0.504,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.138:0.867,0.128,0.005	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.075:0.927,0.071,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.14:0.866,0.128,0.006	0|0:0.062:0.939,0.06,0.001	0|0:0.194:0.819,0.168,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18160285	SNP-3.18159066.	C	A	.	PASS	AR2=0.99;DR2=0.992;AF=0.328	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0.036:0.965,0.034,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.49:0.51,0.49,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	1|1:1.966:0,0.033,0.967	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.122:0.884,0.109,0.006	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.964,0.036,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.961,0.039,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.151:0.856,0.137,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0.104:0.896,0.104,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.02:0.013,0.955,0.032	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.998:0.013,0.975,0.012	1|1:2:0,0,1	0|1:0.988:0.024,0.965,0.012	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.965:0,0.035,0.965	1|1:1.957:0,0.043,0.957	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.98:0.033,0.955,0.013	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.955:0.001,0.044,0.955	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.058:0.943,0.056,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.069:0.933,0.065,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.038:0.963,0.037,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.852:0.151,0.847,0.003	0|0:0.372:0.628,0.372,0	0|0:0.036:0.965,0.034,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.969,0.03,0.001	0|0:0.03:0.97,0.029,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.038:0.963,0.036,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18160356	SNP-3.18159137.	C	A	.	PASS	AR2=1;DR2=1;AF=0.313	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1.006:0.013,0.967,0.019	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.004:0.016,0.964,0.02	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18162961	SNP-3.18161742.	A	G	.	PASS	AR2=1;DR2=1;AF=0.204	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18163077	SNP-3.18161858.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.337	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.056:0.945,0.055,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.966,0.034,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18163718	SNP-3.18162499.	A	G	.	PASS	AR2=0.984;DR2=0.987;AF=0.262	GT:DS:GP	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.268:0.745,0.242,0.013	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.113:0.889,0.109,0.002	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.14:0.863,0.133,0.004	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0.048:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.13:0.873,0.124,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.157:0.851,0.14,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.93,0.07,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.147:0.858,0.136,0.006	0|0:0.179:0.828,0.165,0.007	0|0:0.14:0.865,0.13,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.173:0.834,0.158,0.007	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.013:0.988,0.012,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.117:0.883,0.117,0	0|0:0.231:0.78,0.21,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.202:0.804,0.189,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.232:0.781,0.207,0.013	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.134:0.87,0.125,0.004	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.125:0.878,0.118,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18163964	SNP-3.18162745.	C	A	.	PASS	AR2=0.997;DR2=0.998;AF=0.34	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.044:0.957,0.043,0	1|1:2:0,0,1	0|0:0.072:0.929,0.07,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.041:0.96,0.04,0	0|0:0:1,0,0	0|0:0.046:0.954,0.045,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.055:0,0.945,0.055	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1.166:0,0.833,0.167	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.09:0.912,0.086,0.002	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18164335	SNP-3.18163116.	C	A	.	PASS	AR2=0.995;DR2=0.996;AF=0.335	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.968,0.031,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.023:0.977,0.023,0	0|0:0.048:0.952,0.047,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.759:0,0.241,0.759	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.93:0,0.07,0.93	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.768:0,0.232,0.768	1|1:1.882:0,0.118,0.882	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.83:0.189,0.793,0.019	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.917:0,0.083,0.917	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.015,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18166088	SNP-3.18164869.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.301	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.944:0,0.055,0.944	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.908:0.002,0.087,0.911	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.963:0.001,0.036,0.964	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.984:0,0.016,0.984	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.977:0,0.023,0.977	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.974:0,0.026,0.974	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18166305	SNP-3.18165086.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.329	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.96,0.04,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.672:0.001,0.327,0.672	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.844:0.001,0.155,0.845	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.772:0.001,0.225,0.774	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18169292	SNP-3.18168073.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.338	GT:DS:GP	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	0|0:0.038:0.962,0.037,0.001	1|1:2:0,0,1	0|0:0.028:0.973,0.027,0	0|0:0:1,0,0	0|0:0.034:0.966,0.033,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.053:0.948,0.052,0.001	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.099:0.901,0.099,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0.001:0.999,0.001,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.932,0.068,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.313:0.695,0.297,0.008	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.044:0.956,0.044,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.966,0.034,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18170132	SNP-3.18168913.	A	G	.	PASS	AR2=1;DR2=1;AF=0.216	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18170561	SNP-3.18169342.	C	A	.	PASS	AR2=0.996;DR2=0.996;AF=0.341	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.091:0.911,0.086,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.981:0,0.018,0.981	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.959,0.041,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.978:0,0.021,0.978	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.729:0.004,0.264,0.732	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.901:0.004,0.092,0.904	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.09:0.912,0.086,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.952,0.047,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.97,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.076:0.925,0.075,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.97,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18171460	SNP-3.18170241.	C	A	.	PASS	AR2=0.993;DR2=0.994;AF=0.367	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.063:0.937,0.062,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.05,0.001	0|0:0:1,0,0	0|0:0.056:0.945,0.054,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.939,0.06,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.058:0.942,0.058,0	0|0:0.092:0.91,0.088,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.207:0.8,0.193,0.007	0|0:0.062:0.939,0.061,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.262:0.76,0.217,0.022	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.017:0.983,0.016,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.153:0.855,0.138,0.007	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.95,0.05,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.94,0.058,0.001	0|0:0.19:0.816,0.178,0.006	1|1:2:0,0,1	0|0:0:1,0,0
+3	18171786	SNP-3.18170567.	A	G	.	PASS	AR2=0.998;DR2=0.999;AF=0.258	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:0.583:0.417,0.583,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18175859	SNP-3.18174640.	C	A	.	PASS	AR2=0.92;DR2=0.922;AF=0.409	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.075:0.219,0.487,0.294	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1.061:0.221,0.498,0.282	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.047:0.228,0.498,0.275	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.031:0.235,0.499,0.266	1|0:1.088:0.211,0.489,0.299	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1.046:0.228,0.498,0.274	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1.056:0.223,0.498,0.279	0|0:1.118:0.206,0.471,0.324	1|1:2:0,0,1	1|1:1.059:0.221,0.499,0.28	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.046:0.228,0.498,0.274	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.21:0.051,0.688,0.261	1|1:2:0,0,1	1|1:1.895:0.003,0.099,0.898	0|1:0.808:0.192,0.808,0	1|1:2:0,0,1	0|1:0.966:0.048,0.938,0.014	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.885:0.003,0.109,0.888	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.91:0.002,0.085,0.912	1|1:1.805:0.008,0.178,0.813	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.91:0.002,0.086,0.912	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.037:0.232,0.498,0.269	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1.047:0.227,0.498,0.275	0|1:0.969:0.265,0.501,0.234	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.049:0.227,0.498,0.275	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.153:0.189,0.469,0.342	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1.046:0.228,0.498,0.274	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1.045:0.228,0.498,0.274	0|1:1.034:0.234,0.499,0.267	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1.044:0.23,0.497,0.273	1|0:1.128:0.203,0.467,0.33	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.046:0.228,0.498,0.274	1|1:2:0,0,1	1|0:1.048:0.227,0.498,0.275	1|0:1.046:0.228,0.498,0.274	1|1:1.068:0.217,0.498,0.285	0|0:0:1,0,0	1|0:1.046:0.228,0.498,0.274	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.047:0.228,0.498,0.274	0|1:1.052:0.225,0.498,0.277	1|0:1.046:0.228,0.498,0.274	0|0:1.047:0.227,0.498,0.274	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.064:0.219,0.498,0.283	1|0:1:0,1,0	1|1:1.898:0.002,0.097,0.9	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18176323	SNP-3.18175104.	C	A	.	PASS	AR2=0.994;DR2=0.994;AF=0.351	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.077:0.924,0.075,0.001	1|1:2:0,0,1	0|0:0.055:0.946,0.053,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.085:0.917,0.08,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.111:0.893,0.103,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.027:0.973,0.027,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.046:0.954,0.046,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.115:0.886,0.114,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0.117:0.886,0.111,0.003	0|0:0.087:0.915,0.082,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.103:0.9,0.097,0.003	0|0:0.054:0.947,0.052,0.001	0|0:0:1,0,0	1|1:1.989:0,0.011,0.989	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0.155:0.856,0.133,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.082:0.92,0.079,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.033,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.09:0.912,0.086,0.002	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18176660	SNP-3.18175441.	A	G	.	PASS	AR2=1;DR2=1;AF=0.263	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.983:0,0.017,0.983	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.94,0.06,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18176783	SNP-3.18175564.	C	A	.	PASS	AR2=0.982;DR2=0.985;AF=0.297	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.891:0.004,0.101,0.895	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.685:0.025,0.266,0.709	1|1:1.777:0.013,0.198,0.79	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.995:0,0.005,0.995	1|1:1.788:0.011,0.189,0.799	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.965:0.001,0.034,0.965	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.697:0.022,0.258,0.72	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.769:0.013,0.205,0.782	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.753:0.015,0.216,0.769	1|1:1.793:0.011,0.184,0.805	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.756:0.016,0.212,0.772	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.735:0.016,0.232,0.752	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.826:0.007,0.159,0.833	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.784:0.012,0.193,0.796	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.692:0.024,0.259,0.716	1|1:1.666:0.028,0.277,0.694	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	18178565	SNP-3.18177346.	A	G	.	PASS	AR2=0.906;DR2=0.937;AF=0.296	GT:DS:GP	1|1:1.86:0.004,0.132,0.864	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.363:0.656,0.325,0.019	0|0:0:1,0,0	0|0:0.421:0.626,0.327,0.047	0|0:0.494:0.568,0.37,0.062	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.79:0.012,0.187,0.802	1|1:2:0,0,1	1|1:1.484:0.047,0.422,0.531	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.497:0.566,0.371,0.063	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.939:0.001,0.059,0.94	0|0:0.13:0.877,0.116,0.007	1|1:2:0,0,1	1|1:1.47:0.067,0.396,0.537	1|1:2:0,0,1	1|1:1.932:0.002,0.065,0.934	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.482:0.604,0.309,0.086	1|0:1:0,1,0	1|1:1.951:0.001,0.047,0.952	0|1:1:0,1,0	1|1:1.84:0.009,0.142,0.849	0|0:0:1,0,0	1|1:1.889:0.002,0.108,0.89	0|0:0:1,0,0	0|1:1.409:0.008,0.574,0.418	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.982:0,0.018,0.982	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.384:0.635,0.346,0.019	0|0:0:1,0,0	1|0:1.24:0.093,0.575,0.333	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.804:0.01,0.176,0.814	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.353:0.677,0.293,0.03	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.568:0.498,0.437,0.066	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.633:0.476,0.415,0.109	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.619:0.487,0.407,0.106	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.634:0.008,0.349,0.643	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.555:0.04,0.365,0.595	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.552:0.532,0.385,0.084	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.585:0.507,0.4,0.092	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.263:0.051,0.635,0.314	1|1:2:0,0,1	1|0:0.52:0.555,0.371,0.075	0|0:0:1,0,0	0|1:1.317:0.066,0.552,0.383	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.873:0.001,0.125,0.874	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.6:0.5,0.401,0.099	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.96:0,0.039,0.96	1|1:1.879:0.003,0.115,0.882	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.868:0.005,0.123,0.872	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.924:0.003,0.069,0.928	1|1:2:0,0,1	1|1:1.263:0.185,0.368,0.448	1|1:1.749:0.008,0.236,0.757	1|1:1.65:0,0.35,0.65	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.579:0.513,0.395,0.092	0|0:0.103:0.902,0.094,0.005	1|0:1.493:0.01,0.488,0.503	1|1:2:0,0,1	1|1:1.859:0.003,0.134,0.863	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.893:0.002,0.102,0.895	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.755:0.015,0.214,0.77	1|0:0.808:0.317,0.557,0.125	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18178993	SNP-3.18177774.	C	A	.	PASS	AR2=0.992;DR2=0.993;AF=0.344	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.095:0.907,0.091,0.002	1|1:1.952:0,0.047,0.952	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.078:0.923,0.076,0.001	0|0:0:1,0,0	0|0:0.038:0.963,0.036,0.001	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.211:0.797,0.195,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.301:0.702,0.294,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.927:0.001,0.072,0.927	1|1:1.883:0.003,0.111,0.886	0|0:0.042:0.959,0.04,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.218:0.789,0.205,0.007	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.1:0.903,0.094,0.003	0|0:0:1,0,0	0|0:0.184:0.821,0.174,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.877:0.005,0.113,0.882	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.945,0.054,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.918:0.002,0.077,0.921	0|0:0:1,0,0
+3	18180388	SNP-3.18179169.	C	A	.	PASS	AR2=0.922;DR2=0.945;AF=0.41	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.863:0.327,0.484,0.189	0|0:0:1,0,0	1|0:0.749:0.389,0.473,0.138	0|0:0:1,0,0	0|0:0.48:0.577,0.366,0.057	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.665:0.431,0.474,0.095	0|0:0.032:0.969,0.031,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.316:0.153,0.378,0.469	1|0:0.817:0.323,0.538,0.14	0|0:0.435:0.612,0.34,0.048	0|0:0.413:0.629,0.328,0.043	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.445:0.604,0.347,0.049	0|0:0.626:0.46,0.454,0.086	0|1:0.758:0.374,0.493,0.132	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.97,0.029,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.96,0.038,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.411:0.631,0.326,0.042	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.33:0.675,0.32,0.005	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.124:0.876,0.123,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.881:0.002,0.116,0.882	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.123:0.878,0.121,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0.295:0.705,0.294,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.452:0.599,0.35,0.051	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.67:0.437,0.456,0.107	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.421:0.623,0.333,0.044	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.491:0.575,0.359,0.066	0|1:0.571:0.51,0.408,0.081	0|0:0:1,0,0	0|0:0.411:0.631,0.326,0.042	1|1:2:0,0,1	0|0:0.415:0.628,0.329,0.043	1|0:1:0,1,0	1|1:2:0,0,1	1|0:0.775:0.373,0.478,0.148	1|0:0.605:0.486,0.423,0.091	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.057:0.943,0.056,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.411:0.631,0.326,0.042	1|1:2:0,0,1	0|1:0.451:0.599,0.35,0.05	0|0:0.411:0.631,0.326,0.042	0|0:0.645:0.45,0.455,0.095	0|0:0:1,0,0	0|0:0.411:0.631,0.326,0.042	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.441:0.608,0.343,0.049	0|0:0.411:0.631,0.326,0.042	0|0:0.426:0.619,0.335,0.046	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.478:0.578,0.365,0.057	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0
+3	18180561	SNP-3.18179342.	C	A	.	PASS	AR2=0.947;DR2=0.961;AF=0.444	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.441:0.585,0.389,0.026	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0.166:0.842,0.151,0.007	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.651:0.415,0.518,0.066	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.123:0.882,0.113,0.005	0|0:0:1,0,0	0|0:0.097:0.906,0.092,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.281:0.747,0.226,0.028	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.428:0.625,0.322,0.053	1|0:1:0,1,0	1|0:0.959:0.334,0.373,0.293	0|0:0.566:0.507,0.42,0.073	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.233:0.788,0.19,0.022	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.14:0.074,0.713,0.214	0|0:0:1,0,0	0|0:0.461:0.585,0.369,0.046	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.863:0.013,0.111,0.876	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.54:0.548,0.363,0.089	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.615:0.481,0.424,0.095	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.169:0.836,0.159,0.005	0|0:0.313:0.713,0.261,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.345:0.669,0.318,0.014	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.363:0.691,0.255,0.054	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.29:0.739,0.233,0.029	0|0:0.23:0.777,0.215,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.711:0.419,0.451,0.13	0|0:0.733:0.383,0.501,0.116	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.179:0.827,0.167,0.006	0|0:0.037:0.964,0.036,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.096:0.907,0.09,0.003	0|0:0.129:0.877,0.118,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.565:0.516,0.404,0.081	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.547:0.542,0.369,0.089	0|0:0.153:0.854,0.139,0.007	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18181071	SNP-3.18179852.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.208	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.961:0,0.039,0.961	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.034:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18181591	SNP-3.18180372.	C	A	.	PASS	AR2=0.986;DR2=0.988;AF=0.335	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.079:0.923,0.076,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.88:0.003,0.115,0.883	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.212:0.811,0.167,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.21:0.811,0.168,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.189:0.817,0.177,0.006	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.842:0.002,0.154,0.844	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.941:0.001,0.057,0.942	1|1:1.826:0.007,0.159,0.834	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.833:0.014,0.138,0.847	1|1:1.699:0.026,0.249,0.725	1|1:1.97:0,0.03,0.97	1|1:2:0,0,1	1|1:1.974:0,0.026,0.974	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.904:0.003,0.09,0.907	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.921:0.002,0.075,0.923	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.724:0.01,0.257,0.733	1|1:2:0,0,1	1|1:1.934:0.001,0.064,0.935	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.853:0.003,0.141,0.856	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.13:0.874,0.123,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.792:0.007,0.194,0.799	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	18184907	SNP-3.18183688.	A	G	.	PASS	AR2=0.997;DR2=0.998;AF=0.365	GT:DS:GP	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.304:0.696,0.303,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.951:0.003,0.043,0.954	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.361:0,0.639,0.361	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	18189053	SNP-3.18187834.	A	G	.	PASS	AR2=0.998;DR2=0.999;AF=0.211	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.046:0.955,0.045,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.22:0.782,0.216,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18189077	SNP-3.18187858.	A	G	.	PASS	AR2=0.996;DR2=0.996;AF=0.37	GT:DS:GP	0|0:0.03:0.97,0.03,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.101:0.902,0.095,0.003	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:0.861:0.169,0.801,0.03	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0.102:0.904,0.09,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.951:0.003,0.043,0.954	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.133:0.872,0.122,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.953,0.047,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.935:0.001,0.064,0.935	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.059:0.943,0.055,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	18190742	SNP-3.18189523.	C	A	.	PASS	AR2=0.974;DR2=0.978;AF=0.295	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.871:0.005,0.119,0.876	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.795:0.012,0.182,0.806	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.692:0.027,0.254,0.719	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.965,0.034,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.452:0.548,0.452,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.97:0.001,0.028,0.971	1|1:1.8:0.011,0.177,0.811	1|1:1.971:0.001,0.027,0.972	1|1:2:0,0,1	1|1:1.86:0.005,0.131,0.865	0|0:0:1,0,0	1|1:1.818:0.009,0.165,0.826	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.943:0.001,0.055,0.944	1|1:1.94:0.001,0.058,0.941	1|1:1.953:0.001,0.045,0.954	1|1:1.91:0.001,0.088,0.911	1|1:1.81:0.009,0.172,0.819	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.783:0.01,0.196,0.793	0|0:0.001:0.999,0.001,0	1|1:1.86:0.005,0.13,0.865	1|1:1.781:0.014,0.192,0.795	1|1:1.809:0.01,0.17,0.82	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.672:0.023,0.281,0.695	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.803:0.01,0.176,0.813	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.976:0.001,0.023,0.977	1|1:1.578:0.039,0.344,0.617	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.756:0.013,0.218,0.769	1|1:1.719:0.014,0.252,0.734	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.823:0.007,0.164,0.83	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.854:0.007,0.133,0.86	0|0:0:1,0,0	1|1:1.873:0.005,0.118,0.878	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.94:0.001,0.057,0.941	1|1:2:0,0,1	1|1:1.971:0.001,0.027,0.972	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.769:0.013,0.204,0.783	1|1:1.919:0.004,0.074,0.922	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.992,0.008,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18191154	SNP-3.18189935.	A	G	.	PASS	AR2=0.985;DR2=0.988;AF=0.214	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.896:0.003,0.098,0.899	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.397:0.611,0.382,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.95,0.05,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.058:0.943,0.055,0.001	1|1:2:0,0,1	1|0:1.583:0.039,0.34,0.621	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.884:0.003,0.109,0.887	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.89:0.003,0.104,0.893	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.89:0.003,0.104,0.893	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.076:0.925,0.073,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.086:0.916,0.082,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.867:0.004,0.125,0.871	1|1:2:0,0,1	1|1:1.89:0.003,0.104,0.893	0|0:0:1,0,0	1|1:1.89:0.003,0.104,0.893	0|0:0:1,0,0	0|0:0.084:0.917,0.081,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.951,0.047,0.002	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.131:0.876,0.116,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.955,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	1|0:1:0,1,0
+3	18194227	SNP-3.18193008.	C	A	.	PASS	AR2=0.94;DR2=0.957;AF=0.257	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.272:0.121,0.487,0.393	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.475:0.072,0.38,0.548	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.454:0.074,0.398,0.528	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.04:0.96,0.04,0	1|1:1.824:0.002,0.171,0.827	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.647:0.014,0.326,0.66	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.173:0.114,0.599,0.287	0|0:0.492:0.515,0.477,0.008	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.544:0.047,0.362,0.591	0|0:0:1,0,0	1|1:1.494:0.059,0.388,0.553	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.406:0.092,0.41,0.498	1|0:1.479:0.056,0.409,0.535	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.476:0.091,0.342,0.567	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.916:0.004,0.075,0.921	1|1:2:0,0,1	1|1:1.563:0.046,0.344,0.609	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.687:0.034,0.244,0.721	1|1:1.832:0.01,0.147,0.843	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.62:0.04,0.299,0.66	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.402:0.081,0.436,0.483	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.782:0.013,0.192,0.795	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.902:0.001,0.096,0.903	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.757:0.009,0.224,0.767	1|1:2:0,0,1	1|1:1.559:0.042,0.357,0.601	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.682:0.02,0.278,0.702	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.57:0.032,0.366,0.602	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.887:0,0.113,0.887	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.497:0.066,0.371,0.563	1|0:0.597:0.403,0.597,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18194382	SNP-3.18193163.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.303	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.076:0.926,0.073,0.001	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.932:0.002,0.064,0.934	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.94:0.001,0.058,0.941	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.965:0,0.034,0.966	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.952:0.001,0.047,0.952	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.928:0.002,0.067,0.93	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.978:0,0.022,0.978	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.941:0.001,0.057,0.942	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0,0.025,0.975	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18195767	SNP-3.18194548.	A	G	.	PASS	AR2=0.997;DR2=0.998;AF=0.39	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.032:0.968,0.032,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.04:0.96,0.04,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.103:0.901,0.096,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.028:0.973,0.027,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.085:0.918,0.08,0.002	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.088:0.912,0.088,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.036,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.061:0.005,0.93,0.066	1|1:2:0,0,1	0|0:0.107:0.896,0.101,0.003	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	18195904	SNP-3.18194685.	A	G	.	PASS	AR2=0.983;DR2=0.985;AF=0.317	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.247:0.165,0.422,0.412	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.136:0.866,0.132,0.002	0|0:0:1,0,0	0|1:0.904:0.321,0.454,0.225	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.94,0.059,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.372:0.681,0.265,0.054	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.138:0.866,0.13,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.195:0.816,0.173,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.207:0.807,0.179,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.197:0.806,0.191,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1.108:0.109,0.674,0.217	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.145:0.857,0.142,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1.241:0.037,0.685,0.278	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18197169	SNP-3.18195950.	A	G	.	PASS	AR2=0.969;DR2=0.974;AF=0.237	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.265:0.755,0.226,0.019	1|0:1.169:0.024,0.784,0.193	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.255:0.764,0.217,0.019	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.936,0.063,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.046:0.957,0.04,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.061:0.94,0.059,0.001	0|0:0.2:0.82,0.159,0.02	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.655:0.427,0.491,0.082	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.014:0.005,0.976,0.019	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.793:0.264,0.678,0.058	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.924:0.092,0.892,0.016	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.221:0.789,0.2,0.01	1|1:2:0,0,1	0|0:0.044:0.957,0.043,0.001	1|1:2:0,0,1	0|0:0.185:0.818,0.179,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.765:0.014,0.206,0.779	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.084:0.089,0.738,0.173	0|0:0.127:0.875,0.123,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.106:0.897,0.1,0.003	0|0:0.068:0.933,0.065,0.002	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.06:0.941,0.057,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.444:0.6,0.355,0.044	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.095:0.905,0.094,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.095:0.906,0.094,0.001	0|0:0.32:0.722,0.236,0.042	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.301:0.742,0.215,0.043	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.084:0.918,0.08,0.002	0|0:0:1,0,0	1|0:1.259:0.02,0.701,0.279	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	18197577	SNP-3.18196358.	A	G	.	PASS	AR2=0.964;DR2=0.969;AF=0.335	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.783:0.37,0.476,0.154	1|0:1:0,1,0	0|0:0.69:0.426,0.459,0.116	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.796:0.363,0.478,0.159	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:0.734:0.401,0.464,0.135	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.788:0.368,0.477,0.156	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.883:0,0.116,0.884	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:0.735:0.4,0.465,0.135	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:0.789:0.367,0.477,0.156	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1.027:0.223,0.527,0.25	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:0.788:0.368,0.477,0.156	0|1:0.788:0.368,0.477,0.156	1|1:2:0,0,1	0|0:0.617:0.502,0.379,0.119	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:0.788:0.368,0.477,0.156	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18197640	SNP-3.18196421.	A	G	.	PASS	AR2=0.959;DR2=0.971;AF=0.308	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.378:0.09,0.442,0.468	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.498:0.058,0.385,0.557	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.528:0.072,0.328,0.6	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.749:0.021,0.209,0.77	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.749:0.019,0.213,0.768	1|1:1.665:0.031,0.273,0.696	0|1:1:0,1,0	1|0:1.659:0.03,0.28,0.69	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.512:0.05,0.389,0.561	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.867:0.006,0.121,0.873	1|0:1:0,1,0	1|0:1.315:0.132,0.421,0.447	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.895:0.004,0.097,0.899	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.708:0.024,0.244,0.732	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.691:0.023,0.263,0.714	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.889:0.004,0.103,0.893	0|0:0:1,0,0	1|1:1.684:0.028,0.259,0.713	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.642:0.037,0.283,0.68	1|1:1.467:0.075,0.383,0.542	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.609:0.033,0.325,0.642	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.706:0.023,0.248,0.729	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.87:0.009,0.111,0.879	0|0:0:1,0,0	0|0:0:1,0,0
+3	18197797	SNP-3.18196578.	C	A	.	PASS	AR2=0.975;DR2=0.981;AF=0.404	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.416:0.653,0.278,0.069	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.166:0.844,0.145,0.011	0|1:1:0,1,0	0|0:0.192:0.817,0.174,0.009	0|0:0.156:0.849,0.146,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.069:0.934,0.064,0.002	0|0:0:1,0,0	0|0:0.085:0.918,0.078,0.004	0|0:0:1,0,0	0|0:0.159:0.845,0.15,0.005	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.48:0.572,0.377,0.052	0|0:0:1,0,0	0|0:0.041:0.959,0.041,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.104:0.898,0.099,0.002	0|0:0.151:0.854,0.14,0.005	0|0:0.307:0.721,0.251,0.028	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.952,0.046,0.002	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.523:0.547,0.383,0.07	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.087:0.915,0.083,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.001:0.999,0.001,0	0|0:0.146:0.86,0.135,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.562:0.457,0.524,0.019	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.118:0.886,0.109,0.004	0|0:0.126:0.878,0.118,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.284:0.741,0.234,0.025	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0.322:0.683,0.312,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.992,0.008,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.166:0.84,0.154,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.127:0.876,0.122,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18198206	SNP-3.18196987.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.341	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.095:0.908,0.09,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.998:0.002,0.998,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.962,0.037,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.969,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18201428	SNP-3.18200209.	C	A	.	PASS	AR2=0.922;DR2=0.937;AF=0.282	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.903:0.274,0.548,0.177	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.216:0.801,0.182,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.199:0.818,0.165,0.017	0|0:0.131:0.874,0.122,0.004	0|0:0.123:0.881,0.114,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.116:0.888,0.109,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.133:0.872,0.124,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.246:0.77,0.214,0.016	0|0:0.11:0.894,0.102,0.004	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.828:0.008,0.155,0.837	0|0:0.084:0.918,0.08,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.637:0.032,0.3,0.668	1|1:1.673:0.028,0.27,0.701	0|0:0.089:0.913,0.084,0.002	1|1:1.7:0.026,0.249,0.725	1|1:1.578:0.051,0.32,0.629	0|0:0.055:0.946,0.054,0	0|1:0.961:0.14,0.76,0.1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.536:0.057,0.349,0.593	1|1:1.586:0.043,0.327,0.629	0|0:0:1,0,0	1|1:1.682:0.028,0.263,0.709	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.467:0.091,0.35,0.558	0|0:0:1,0,0	0|0:0.118:0.886,0.11,0.004	1|1:1.582:0.045,0.329,0.626	0|0:0:1,0,0	1|0:1.462:0.071,0.396,0.533	1|1:1.424:0.068,0.44,0.492	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.444:0.065,0.425,0.509	0|0:0:1,0,0	1|1:1.711:0.023,0.242,0.735	1|1:1.619:0.038,0.305,0.657	1|1:1.608:0.039,0.313,0.648	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.713:0.021,0.244,0.735	1|1:2:0,0,1	1|1:1.689:0.026,0.26,0.714	1|1:1.714:0.026,0.234,0.74	1|1:1.743:0.017,0.222,0.761	1|1:1.596:0.042,0.321,0.637	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.635:0.031,0.303,0.666	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.299:0.701,0.299,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.634:0.034,0.299,0.668	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.085:0.917,0.081,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.973,0.026,0.001	1|1:1.671:0.027,0.274,0.699	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.127:0.877,0.118,0.004	1|1:2:0,0,1	0|0:0.127:0.878,0.116,0.005	1|1:1.752:0.016,0.216,0.768	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.104:0.9,0.097,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.614:0.037,0.311,0.652	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.178:0.828,0.166,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.828:0.008,0.155,0.836	1|1:2:0,0,1	1|1:1.714:0.02,0.246,0.734	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.689:0.026,0.259,0.715	1|1:1.718:0.022,0.238,0.74	1|1:2:0,0,1	1|1:1.64:0.032,0.295,0.672	1|1:2:0,0,1	1|1:1.763:0.013,0.212,0.775	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18202173	SNP-3.18200954.	C	A	.	PASS	AR2=0.992;DR2=0.993;AF=0.324	GT:DS:GP	0|0:0:1,0,0	1|1:1.972:0,0.027,0.972	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.977:0,0.023,0.977	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.947,0.049,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.021,0.001	0|0:0:1,0,0	0|1:0.998:0.002,0.998,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.85:0.005,0.14,0.855	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.879:0.003,0.116,0.881	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.776:0.013,0.198,0.789	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:1.983:0,0.017,0.983	1|1:1.831:0.002,0.165,0.833	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.797:0.002,0.199,0.799	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.977:0,0.022,0.978	1|1:1.952:0.001,0.047,0.953	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:1.969:0,0.03,0.97	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.908:0.001,0.089,0.91	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.959:0,0.04,0.96	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.846:0.003,0.148,0.849	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.971:0,0.028,0.972	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.924:0.001,0.075,0.924	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.899:0.101,0.899,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.971:0,0.028,0.971	0|0:0:1,0,0
+3	18204250	SNP-3.18203031.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.249	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.173:0.001,0.825,0.174	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18205698	SNP-3.18204479.	C	A	.	PASS	AR2=0.998;DR2=0.999;AF=0.328	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.667:0.335,0.662,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18206732	SNP-3.18205513.	A	G	.	PASS	AR2=1;DR2=1;AF=0.21	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18206990	SNP-3.18205771.	A	G	.	PASS	AR2=1;DR2=1;AF=0.247	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18207367	SNP-3.18206148.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.352	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.49:0.52,0.469,0.011	1|1:2:0,0,1	0|0:0.025:0.975,0.025,0	0|0:0.016:0.985,0.015,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.93,0.069,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.941,0.057,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.035,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.932:0.002,0.065,0.934	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.036:0.964,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.035,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.036:0.964,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.97:0,0.03,0.97	0|1:1.06:0,0.94,0.06	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.035,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.065:0.936,0.063,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.005,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.939:0.001,0.059,0.94	0|0:0:1,0,0
+3	18210131	SNP-3.18208912.	A	G	.	PASS	AR2=0.982;DR2=0.989;AF=0.235	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.975,0.024,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.347:0.659,0.335,0.006	0|0:0.599:0.49,0.421,0.089	0|0:0.6:0.489,0.421,0.089	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.142:0.858,0.142,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.119:0.884,0.112,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.206:0.803,0.188,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.014:0.986,0.014,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.485:0.572,0.37,0.057	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18212977	SNP-3.18211758.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.249	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.17:0,0.83,0.17	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18217394	SNP-3.18216175.	C	A	.	PASS	AR2=0.94;DR2=0.941;AF=0.468	GT:DS:GP	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:1.045:0.229,0.496,0.274	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.978:0.263,0.496,0.241	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.023:0.239,0.499,0.262	1|0:1:0,1,0	1|0:1.047:0.228,0.496,0.275	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1.06:0.222,0.497,0.282	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:1.023:0.239,0.499,0.262	0|0:0:1,0,0	1|0:1:0,1,0	0|0:1.026:0.238,0.499,0.263	0|0:0:1,0,0	0|1:1.023:0.239,0.499,0.262	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.032:0.235,0.498,0.267	1|0:0.975:0.262,0.501,0.237	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.558:0.46,0.522,0.018	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.174:0.17,0.486,0.344	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.023:0.239,0.499,0.262	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1.023:0.239,0.499,0.262	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.956,0.044,0.001	1|0:1.024:0.239,0.499,0.263	1|0:1.033:0.234,0.498,0.267	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1.032:0.234,0.499,0.267	0|1:1:0,1,0	1|0:1.026:0.237,0.499,0.264	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.026:0.238,0.499,0.264	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1.068:0.216,0.501,0.284	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.023:0.239,0.499,0.262	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.024:0.239,0.499,0.263	0|1:1.022:0.24,0.499,0.262	0|1:1.037:0.232,0.499,0.269	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.037:0.232,0.499,0.269
+3	18218772	SNP-3.18217553.	C	A	.	PASS	AR2=0.98;DR2=0.983;AF=0.287	GT:DS:GP	0|0:0:1,0,0	1|1:1.853:0.006,0.135,0.859	0|0:0:1,0,0	1|1:1.851:0.006,0.137,0.857	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.86:0.006,0.128,0.866	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.856:0.006,0.132,0.862	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1.083:0.096,0.725,0.179	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.858:0.005,0.132,0.863	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.682:0.024,0.27,0.706	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.853:0.006,0.136,0.858	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.863:0.005,0.128,0.867	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.555:0.027,0.392,0.582	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.822:0.008,0.162,0.83	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.802:0.01,0.177,0.813	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.888:0.004,0.104,0.892	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.851:0.006,0.136,0.857	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.784:0.011,0.193,0.795	1|1:1.866:0.005,0.125,0.871	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.576:0.014,0.397,0.59	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.818:0.014,0.155,0.832	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18220398	SNP-3.18219179.	C	A	.	PASS	AR2=0.991;DR2=0.993;AF=0.397	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.069:0.932,0.066,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.082:0.92,0.078,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.084:0.919,0.078,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.31:0.761,0.168,0.071	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.395:0,0.605,0.395	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.759:0.014,0.213,0.773	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.075:0.927,0.071,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.962,0.037,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.078:0.923,0.076,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.287:0.092,0.529,0.379	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.072:0.93,0.068,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18221043	SNP-3.18219824.	A	G	.	PASS	AR2=0.89;DR2=0.914;AF=0.531	GT:DS:GP	1|1:1.673:0.027,0.273,0.7	0|0:0:1,0,0	1|1:1.63:0.035,0.301,0.665	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.518:0.06,0.363,0.578	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.917:0,0.082,0.917	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.622:0.034,0.309,0.657	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.579:0.045,0.332,0.623	1|1:2:0,0,1	1|1:1.587:0.043,0.327,0.63	0|0:0:1,0,0	1|1:1.529:0.053,0.365,0.582	1|1:2:0,0,1	1|1:1.557:0.053,0.338,0.61	1|1:1.57:0.046,0.338,0.616	1|1:1.678:0.033,0.257,0.71	1|1:1.536:0.056,0.353,0.592	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.702:0.023,0.251,0.725	0|1:1.697:0.023,0.256,0.72	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.667:0.028,0.277,0.695	0|1:0.794:0.219,0.769,0.013	1|1:2:0,0,1	1|1:1.691:0.024,0.261,0.715	1|1:1.946:0.002,0.051,0.947	1|1:1.667:0.028,0.277,0.695	0|0:0.047:0.956,0.042,0.003	0|0:0.037:0.964,0.036,0.001	0|0:0:1,0,0	1|1:1.6:0.041,0.319,0.641	0|0:0:1,0,0	1|1:1.715:0.021,0.243,0.736	1|1:2:0,0,1	1|1:1.7:0.023,0.254,0.723	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.703:0.023,0.252,0.726	1|1:2:0,0,1	0|1:1.166:0.14,0.553,0.307	1|1:2:0,0,1	1|1:1.709:0.022,0.248,0.73	1|1:1.705:0.022,0.25,0.727	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.374:0.644,0.337,0.019	0|0:0:1,0,0	1|1:1.705:0.022,0.251,0.727	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.732:0.018,0.232,0.75	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.368:0.061,0.509,0.43	1|1:2:0,0,1	0|0:0.157:0.855,0.134,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.222:0.186,0.406,0.408	0|0:0.415:0.589,0.406,0.005	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.714:0.021,0.245,0.734	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.7:0.023,0.254,0.723	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.571:0.046,0.337,0.617	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.571:0.046,0.337,0.617	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.566:0.047,0.34,0.613	1|1:1.548:0.053,0.346,0.601	1|1:1.713:0.021,0.245,0.734	0|1:0.795:0.218,0.769,0.013	0|0:0:1,0,0	1|1:1.705:0.022,0.25,0.727	1|1:1.664:0.035,0.266,0.699	1|1:2:0,0,1	1|1:1.681:0.032,0.254,0.713	0|0:0:1,0,0	1|1:1.495:0.062,0.38,0.557	1|1:1.535:0.056,0.353,0.591	1|1:2:0,0,1	1|1:1.6:0.041,0.319,0.641	0|0:0:1,0,0	1|1:1.678:0.033,0.256,0.711	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.706:0.022,0.25,0.728	1|1:1.702:0.023,0.252,0.725	1|1:1.71:0.03,0.23,0.74	1|1:2:0,0,1	1|1:1.696:0.023,0.258,0.719	1|1:2:0,0,1	1|1:1.672:0.027,0.274,0.699	1|1:2:0,0,1	1|1:1.541:0.055,0.35,0.595	0|0:0:1,0,0	1|1:1.694:0.024,0.259,0.717	1|1:1.716:0.021,0.243,0.736	1|1:1.72:0.02,0.24,0.74	0|0:0:1,0,0	1|1:1.861:0.003,0.133,0.864	1|1:2:0,0,1	0|1:1.673:0.026,0.276,0.699	1|1:1.698:0.023,0.256,0.721	1|1:1.667:0.028,0.277,0.695	1|1:1.704:0.022,0.251,0.726	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.571:0.046,0.338,0.617	1|1:2:0,0,1	1|1:1.6:0.041,0.319,0.641	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.6:0.041,0.319,0.641	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.595:0.041,0.322,0.637	0|0:0.156:0.854,0.135,0.011	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.813:0.013,0.161,0.826	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.699:0.023,0.254,0.722	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.634:0.038,0.29,0.672	1|1:1.574:0.045,0.336,0.619	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.978:0,0.022,0.978	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.703:0.023,0.252,0.725
+3	18222058	SNP-3.18220839.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.381	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.927:0.003,0.066,0.93	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.979:0.001,0.02,0.98	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.732:0.412,0.445,0.144	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.112:0,0.887,0.113	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.868:0.008,0.116,0.876	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18222085	SNP-3.18220866.	A	G	.	PASS	AR2=0.908;DR2=0.932;AF=0.475	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.557:0.055,0.333,0.612	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.607:0.037,0.32,0.643	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.961:0,0.038,0.962	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.541:0.056,0.347,0.597	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.549:0.053,0.345,0.602	1|1:1.589:0.042,0.327,0.631	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.087:0.241,0.431,0.328	0|1:1.528:0.048,0.377,0.575	1|1:1.649:0.044,0.263,0.693	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.308:0.12,0.453,0.427	0|0:0:1,0,0	1|1:1.524:0.06,0.355,0.585	1|1:1.68:0.026,0.269,0.706	1|1:1.446:0.089,0.376,0.535	1|1:1.808:0.012,0.168,0.82	0|0:0:1,0,0	1|1:1.617:0.037,0.309,0.654	1|1:2:0,0,1	0|0:0.541:0.537,0.384,0.079	1|1:2:0,0,1	0|0:0.535:0.543,0.379,0.078	0|0:0:1,0,0	1|1:1.572:0.046,0.335,0.618	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.5:0.066,0.368,0.566	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.185:0.133,0.548,0.318	0|0:0:1,0,0	1|1:1.705:0.022,0.251,0.727	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.533:0.051,0.366,0.584	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.152:0.863,0.122,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.302:0.728,0.243,0.03	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.532:0.527,0.415,0.059	1|0:1.327:0.099,0.475,0.426	0|0:0.151:0.864,0.121,0.015	1|1:1.687:0.024,0.265,0.711	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.965:0.088,0.859,0.053	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.543:0.054,0.349,0.597	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.702:0.023,0.252,0.725	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.535:0.055,0.356,0.589	1|1:1.752:0.017,0.215,0.768	0|0:0.535:0.543,0.379,0.078	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.31:0.706,0.279,0.015	0|0:0.694:0.429,0.448,0.123	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.625:0.039,0.298,0.664	1|1:1.711:0.032,0.226,0.742	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.641:0.033,0.294,0.674	1|1:2:0,0,1	1|1:1.66:0.03,0.28,0.69	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.531:0.057,0.355,0.588	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.882:0.011,0.096,0.893	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.906:0.004,0.086,0.91	1|1:1.695:0.023,0.259,0.718	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.656:0.031,0.282,0.687	0|0:1.193:0.146,0.514,0.339	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.15:0.865,0.119,0.015	1|1:1.518:0.059,0.364,0.577	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.897:0.345,0.413,0.242	0|0:0.613:0.529,0.328,0.143	1|1:1.846:0.024,0.107,0.869	0|0:0:1,0,0	1|1:1.663:0.029,0.278,0.692
+3	18223715	SNP-3.18222496.	A	G	.	PASS	AR2=0.903;DR2=0.915;AF=0.503	GT:DS:GP	0|0:1.004:0.231,0.534,0.235	0|0:0.128:0.877,0.119,0.005	1|1:2:0,0,1	0|0:0.085:0.918,0.078,0.003	1|1:1.829:0.008,0.155,0.837	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.831:0.008,0.153,0.839	1|1:1.125:0.19,0.495,0.315	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.706:0.023,0.248,0.729	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.806:0.009,0.177,0.814	0|0:0.991:0.242,0.526,0.232	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.726:0.027,0.22,0.753	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.823:0.34,0.497,0.163	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.874:0.302,0.523,0.176	1|1:1.349:0.127,0.398,0.476	0|1:1.02:0.244,0.492,0.264	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.887:0.312,0.489,0.199	0|0:0:1,0,0	0|1:0.834:0.346,0.475,0.179	1|1:2:0,0,1	1|1:1.971:0,0.029,0.971	1|0:0.822:0.352,0.474,0.174	1|1:2:0,0,1	1|1:1.26:0.175,0.391,0.434	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.919:0.334,0.412,0.254	0|0:1.02:0.243,0.494,0.263	0|1:0.977:0.248,0.528,0.224	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.227:0.155,0.463,0.382	1|1:2:0,0,1	0|1:0.96:0.27,0.499,0.231	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.959,0.04,0.001	0|0:0.109:0.895,0.101,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.252:0.766,0.217,0.018	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.218:0.794,0.195,0.012	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.868:0.003,0.126,0.871	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.067:0.935,0.063,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.301:0.728,0.243,0.029	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.451:0.604,0.341,0.055	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.952:0.277,0.493,0.229	1|1:1.997:0,0.003,0.997	0|1:0.996:0.251,0.503,0.246	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.032:0.242,0.484,0.274	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.126:0.881,0.113,0.006	1|1:1.832:0.007,0.153,0.839	0|0:0.864:0.33,0.476,0.194	1|1:2:0,0,1	0|0:0.974:0.265,0.497,0.238	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.815:0.009,0.167,0.824	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.616:0.06,0.264,0.676	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.794:0.01,0.185,0.804	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.888:0.004,0.104,0.892	1|1:1.768:0.015,0.202,0.783	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.862:0.334,0.469,0.196	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.937:0.285,0.494,0.221	0|0:0:1,0,0	1|1:1.75:0.015,0.221,0.765	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.499:0.07,0.361,0.569	1|1:1.86:0.007,0.127,0.866	0|0:0:1,0,0	1|0:1.006:0.251,0.491,0.257	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.951:0,0.048,0.952	1|1:1.315:0.132,0.421,0.447	1|0:1.033:0.235,0.496,0.268	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.068:0.935,0.062,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.987:0.255,0.503,0.242	1|1:2:0,0,1	0|1:1.042:0.237,0.485,0.278	1|1:2:0,0,1	1|1:1.811:0.007,0.175,0.818	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.818:0.351,0.48,0.169	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.959:0,0.041,0.959	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.288:0.736,0.241,0.024	0|1:1.081:0.218,0.482,0.3
+3	18223828	SNP-3.18222609.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.32	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.703:0.003,0.291,0.706	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18224813	SNP-3.18223594.	C	A	.	PASS	AR2=0.981;DR2=0.984;AF=0.343	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.912:0.003,0.083,0.914	0|0:0.069:0.932,0.066,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.27:0.745,0.24,0.015	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.041:0.959,0.04,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.173:0.838,0.15,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.203:0.807,0.182,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.136:0.869,0.126,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.248:0.768,0.215,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.158:0.846,0.149,0.005	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.911:0.003,0.082,0.915	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.911:0.09,0.909,0.001	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:0.969:0.056,0.92,0.024	1|0:1:0,1,0	0|1:0.911:0.103,0.883,0.014	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.874:0.006,0.114,0.88	1|1:1.763:0.02,0.197,0.783	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:0.977:0.074,0.875,0.051	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.163:0.845,0.147,0.008	1|1:1.933:0.002,0.063,0.935	1|1:2:0,0,1	1|1:1.804:0.008,0.181,0.811	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.083:0.919,0.079,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.154:0.851,0.145,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.172:0.837,0.155,0.008	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.19:0.819,0.172,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.287:0.736,0.241,0.023	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.92:0.002,0.076,0.922	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18226980	SNP-3.18225761.	C	A	.	PASS	AR2=1;DR2=1;AF=0.329	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.991:0.01,0.988,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18227370	SNP-3.18226151.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.313	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.91:0.091,0.909,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1.026:0.004,0.967,0.03	1|0:1:0,1,0	0|1:1.006:0.002,0.99,0.008	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.976:0.001,0.022,0.977	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18229318	SNP-3.18228099.	C	A	.	PASS	AR2=1;DR2=1;AF=0.329	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18232933	SNP-3.18231714.	C	A	.	PASS	AR2=0.986;DR2=0.987;AF=0.311	GT:DS:GP	0|0:0:1,0,0	1|1:1.915:0.002,0.08,0.918	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.879:0.005,0.111,0.884	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.957:0.001,0.042,0.957	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.957:0,0.042,0.958	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.882:0.006,0.107,0.887	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.85:0,0.15,0.85	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.785:0.01,0.195,0.795	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.961:0.04,0.959,0.001	1|1:1.967:0,0.033,0.967	1|1:1.893:0.005,0.098,0.897	1|1:1.948:0.001,0.05,0.949	0|0:0:1,0,0	1|1:1.856:0.005,0.133,0.862	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.789:0.008,0.196,0.797	1|1:1.793:0.013,0.182,0.805	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.82:0.007,0.165,0.827	0|0:0:1,0,0	1|1:1.939:0.001,0.058,0.941	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	1|1:1.898:0.003,0.096,0.901	1|1:2:0,0,1	1|1:1.887:0.005,0.103,0.892	1|1:2:0,0,1	1|1:1.869:0.006,0.119,0.875	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.88:0.005,0.11,0.885	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.875:0.004,0.117,0.879	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.962:0.001,0.037,0.963	1|1:1.883:0.004,0.109,0.887	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.949:0.001,0.049,0.95	1|1:1.807:0.009,0.176,0.816	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.89:0.004,0.102,0.894	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.963:0.001,0.036,0.964	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18234891	SNP-3.18233672.	A	G	.	PASS	AR2=0.895;DR2=0.927;AF=0.217	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.482:0.578,0.362,0.06	1|1:2:0,0,1	0|0:0.38:0.654,0.312,0.034	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.478:0.581,0.36,0.059	0|1:0.974:0.143,0.739,0.118	0|0:0.611:0.474,0.44,0.085	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.391:0.648,0.313,0.039	0|1:0.466:0.589,0.356,0.055	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.476:0.584,0.357,0.059	0|0:0.425:0.621,0.334,0.046	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.567:0.589,0.254,0.157	1|1:1.985:0,0.015,0.985	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.193:0.82,0.167,0.013	0|0:0.336:0.689,0.286,0.025	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.106:0.9,0.095,0.006	0|0:0.287:0.737,0.239,0.024	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.564:0.508,0.421,0.072	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.599:0.505,0.39,0.105	0|0:0.441:0.593,0.372,0.035	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.111:0.889,0.111,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.202:0.798,0.202,0	0|0:0:1,0,0	0|0:0.058:0.943,0.055,0.002	0|0:0.048:0.954,0.044,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.079:0.923,0.075,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.93,0.07,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.121:0.884,0.111,0.005	0|0:0.071:0.931,0.068,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0.087:0.915,0.082,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.473:0.586,0.356,0.058	0|0:0.102:0.905,0.089,0.007	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.148:0.859,0.135,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.447:0.604,0.346,0.051	0|0:0:1,0,0	0|0:0.475:0.585,0.356,0.059	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.509:0.558,0.376,0.066	0|0:0.594:0.487,0.433,0.08	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.593:0.495,0.418,0.088	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.655:0.447,0.451,0.102	0|0:0.461:0.593,0.352,0.055	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.103:0.9,0.097,0.003	0|0:0.014:0.986,0.014,0	0|0:0.013:0.987,0.013,0	0|0:0.064:0.937,0.062,0.001	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	1|1:2:0,0,1	0|0:0.067:0.935,0.064,0.001	0|0:0:1,0,0	0|0:0.021:0.979,0.02,0.001	0|0:0:1,0,0	0|0:0.152:0.856,0.136,0.008	1|1:2:0,0,1	0|0:0.365:0.677,0.282,0.042	0|0:0.324:0.717,0.242,0.041	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.528:0.541,0.391,0.068	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.967:0.001,0.03,0.969	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.934,0.064,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.26:0.762,0.216,0.022	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.411:0.633,0.323,0.044	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0
+3	18235515	SNP-3.18234296.	C	A	.	PASS	AR2=1;DR2=1;AF=0.315	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1.006:0.003,0.987,0.009	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.004:0.003,0.989,0.008	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.026:0.974,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18235969	SNP-3.18234750.	A	G	.	PASS	AR2=0.959;DR2=0.969;AF=0.253	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.797:0.01,0.182,0.808	1|1:2:0,0,1	1|1:1.777:0.013,0.198,0.789	0|1:1:0,1,0	1|1:1.772:0.013,0.201,0.785	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.652:0.025,0.297,0.678	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.798:0.011,0.18,0.809	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.777:0.013,0.198,0.789	1|1:1.74:0.015,0.229,0.755	1|1:1.807:0.009,0.175,0.816	1|1:1.777:0.013,0.197,0.79	1|1:1.764:0.014,0.208,0.778	1|1:1.789:0.011,0.188,0.801	0|0:0.025:0.975,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.988:0.365,0.283,0.352	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.252:0.802,0.145,0.054	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.161:0.858,0.124,0.018	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.202:0.112,0.575,0.313	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.777:0.013,0.197,0.79	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.968,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.045:0.955,0.044,0.001	1|1:1.766:0.014,0.206,0.78	1|1:1.833:0.007,0.152,0.841	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.228:0.814,0.144,0.042	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.532:0.101,0.265,0.634	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.74:0.031,0.197,0.771	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.955,0.044,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0
+3	18250460	SNP-3.18249241.	C	A	.	PASS	AR2=0.953;DR2=0.963;AF=0.271	GT:DS:GP	0|0:0:1,0,0	1|1:1.347:0.153,0.347,0.5	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.646:0.039,0.276,0.685	1|1:1.736:0.02,0.224,0.756	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.868:0.007,0.119,0.874	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.857:0.008,0.126,0.866	0|0:0:1,0,0	1|1:1.688:0.045,0.221,0.734	1|1:2:0,0,1	0|1:1.424:0.045,0.486,0.469	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.896:0.104,0.896,0	1|1:1.674:0.032,0.262,0.706	1|1:2:0,0,1	1|1:1.612:0.033,0.322,0.645	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.759:0.027,0.188,0.786	1|1:1.394:0.088,0.431,0.482	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.89:0.003,0.104,0.893	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.636:0.034,0.296,0.67	0|0:0:1,0,0	1|0:0.988:0.239,0.535,0.227	0|0:0:1,0,0	1|0:1.413:0.044,0.498,0.458	1|1:1.668:0.028,0.276,0.696	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.962:0.264,0.51,0.226	1|1:2:0,0,1	1|1:1.816:0.014,0.157,0.829	1|1:1.95:0.002,0.047,0.951	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.8:0.015,0.171,0.815	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.686:0.03,0.255,0.715	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.644:0.033,0.29,0.677	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.718:0.027,0.228,0.745	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.783:0.015,0.186,0.799	0|0:0:1,0,0	1|1:1.944:0.002,0.052,0.946	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.935:0.001,0.063,0.936	1|1:2:0,0,1	1|1:1.794:0.013,0.18,0.807	1|1:1.885:0.007,0.1,0.893	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18251991	SNP-3.18250772.	A	G	.	PASS	AR2=0.98;DR2=0.983;AF=0.284	GT:DS:GP	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.942,0.056,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.135:0.869,0.127,0.004	0|0:0.15:0.856,0.138,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.148:0.857,0.137,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.027:0.973,0.026,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.14:0.863,0.135,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.096:0.908,0.089,0.004	0|0:0.12:0.882,0.116,0.002	0|0:0:1,0,0	1|0:1.267:0.015,0.703,0.282	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.311:0.716,0.256,0.027	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.212:0.001,0.786,0.213	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.102:0.9,0.098,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.048:0.952,0.047,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.933,0.066,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.957,0.042,0.001	0|0:0:1,0,0	0|0:0.046:0.955,0.044,0.001	0|0:0:1,0,0	0|0:0.02:0.981,0.019,0	0|0:0:1,0,0	0|0:0.069:0.932,0.066,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.046:0.954,0.046,0	0|0:0:1,0,0	0|0:0.049:0.951,0.048,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.154:0.852,0.142,0.006	0|0:0.149:0.857,0.138,0.006	0|0:0.111:0.89,0.11,0.001	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.153:0.852,0.142,0.006	0|0:0.075:0.926,0.073,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.112:0.891,0.106,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.554:0.447,0.553,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.079:0.925,0.071,0.004	0|0:0.017:0.983,0.017,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.157:0.849,0.144,0.006	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.951,0.046,0.003	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1
+3	18252450	SNP-3.18251231.	A	G	.	PASS	AR2=0.876;DR2=0.91;AF=0.263	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.492:0.623,0.262,0.115	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.667:0.353,0.626,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.516:0.117,0.25,0.633	0|1:0.718:0.451,0.38,0.169	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.925,0.074,0.001	0|0:0.499:0.567,0.368,0.066	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.318:0.053,0.577,0.37	0|0:0.311:0.701,0.287,0.012	0|0:0.079:0.922,0.078,0	1|1:1.531:0.059,0.351,0.59	0|0:0.407:0.594,0.406,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.909:0.325,0.441,0.234	1|0:1.32:0.116,0.447,0.436	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.362:0.658,0.322,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.603:0.045,0.307,0.648	1|1:1.637:0.051,0.26,0.688	0|0:0:1,0,0	1|1:1.706:0.025,0.243,0.732	0|0:0.563:0.53,0.377,0.093	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.514:0.594,0.298,0.108	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|1:1.153:0.149,0.549,0.302	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.138:0.862,0.138,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.97:0,0.03,0.97	0|0:0:1,0,0	0|0:0.218:0.782,0.218,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|0:0.943:0.179,0.698,0.123	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.137:0.046,0.771,0.183	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.769:0.433,0.366,0.201	1|1:2:0,0,1	0|1:0.95:0.235,0.58,0.185	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.817:0.012,0.159,0.829	1|1:1.999:0,0.001,0.999	1|1:1.739:0.022,0.217,0.761	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.956,0.043,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.462:0.064,0.409,0.526	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.241:0.157,0.446,0.398	0|0:0:1,0,0	0|1:0.864:0.25,0.636,0.114	0|0:0.363:0.771,0.094,0.134	0|0:0:1,0,0	0|0:0.257:0.743,0.257,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.334:0.666,0.334,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.971:0,0.029,0.971	0|0:0.093:0.911,0.085,0.004	0|0:0:1,0,0	0|1:0.895:0.368,0.368,0.264	1|1:1.686:0.036,0.241,0.722	1|1:1.98:0,0.019,0.98	0|0:0:1,0,0	0|0:0.737:0.402,0.46,0.138	0|1:0.609:0.413,0.566,0.022	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.355:0.106,0.433,0.461	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.641:0.035,0.288,0.676	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.129:0.191,0.49,0.32	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.176:0.211,0.402,0.387	1|1:2:0,0,1	1|1:1.78:0.022,0.176,0.802	1|1:2:0,0,1	1|1:1.827:0.018,0.137,0.845	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.242:0.779,0.199,0.021	0|0:0:1,0,0	1|1:1.857:0.017,0.108,0.875	0|0:0.661:0.451,0.437,0.112	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.772:0.015,0.198,0.787	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18255353	SNP-3.18254134.	A	G	.	PASS	AR2=0.962;DR2=0.971;AF=0.211	GT:DS:GP	0|1:1:0,1,0	0|0:0.054:0.947,0.053,0.001	1|1:1.933:0.002,0.064,0.934	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.031:0.97,0.03,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.806:0.007,0.18,0.813	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.703:0.016,0.266,0.719	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.857:0.004,0.135,0.861	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.27:0.752,0.226,0.022	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0.07:0.932,0.066,0.002	0|0:0.117:0.886,0.11,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.963,0.037,0	1|0:1:0,1,0	0|1:1.254:0.065,0.617,0.319	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.959,0.04,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.97,0.03,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.061:0.94,0.06,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.081:0.921,0.077,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.586:0.491,0.432,0.077	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.86:0.005,0.13,0.865	0|0:0:1,0,0	0|0:0.04:0.961,0.039,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.942:0.002,0.055,0.944	0|0:0:1,0,0	1|1:1.941:0.002,0.056,0.943	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:0.922:0.28,0.518,0.202	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1.521:0.058,0.364,0.579	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.457:0.072,0.399,0.529	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.925,0.074,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.058:0.944,0.055,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.386:0.615,0.385,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.108:0.896,0.101,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0.062:0.94,0.058,0.002	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18265320	SNP-3.18264101.	A	G	.	PASS	AR2=0.86;DR2=0.893;AF=0.392	GT:DS:GP	1|0:1.323:0.07,0.538,0.392	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.3:0.002,0.696,0.302	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.782:0.023,0.172,0.805	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1.174:0.109,0.609,0.283	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.778:0.358,0.506,0.136	1|0:0.743:0.386,0.486,0.129	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.603:0.489,0.42,0.091	1|0:0.649:0.456,0.438,0.105	1|0:0.772:0.371,0.486,0.143	0|1:0.96:0.255,0.53,0.215	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.391:0.097,0.416,0.487	1|1:1.587:0.078,0.258,0.664	1|1:1.976:0,0.024,0.976	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.629:0.035,0.302,0.664	0|1:1.074:0.205,0.515,0.28	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.264:0.142,0.452,0.406	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.421:0.088,0.402,0.509	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.708:0.012,0.268,0.72	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.646:0.032,0.291,0.678	0|0:0.829:0.344,0.483,0.173	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.365:0.081,0.472,0.447	0|1:1.072:0.207,0.514,0.279	1|1:1.672:0.027,0.274,0.699	1|1:1.149:0.195,0.461,0.344	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.858:0.375,0.392,0.233	0|0:0:1,0,0	1|0:1.111:0.191,0.508,0.302	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.346:0.669,0.315,0.016	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.653:0.031,0.286,0.683	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1.257:0.14,0.463,0.397	0|0:0.425:0.621,0.333,0.046	0|0:0:1,0,0	1|1:1.612:0.038,0.312,0.65	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.447:0.086,0.382,0.533	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.984:0,0.015,0.984	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.979:0.212,0.598,0.19	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.273:0.136,0.455,0.409	0|0:0:1,0,0	1|0:1.2:0.121,0.557,0.321	0|0:0.628:0.471,0.429,0.1	0|1:1.69:0.025,0.26,0.715	0|0:0.057:0.943,0.057,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.957:0.284,0.475,0.241	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.639:0.033,0.295,0.672	1|1:1.559:0.05,0.34,0.61	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.21:0.79,0.21,0	1|1:1.518:0.153,0.176,0.671	1|1:2:0,0,1	1|1:1.129:0.189,0.493,0.318	1|1:1.634:0.035,0.296,0.669	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.927,0.073,0	0|0:0:1,0,0	0|0:0.552:0.524,0.399,0.076	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.703:0.024,0.248,0.727	0|0:0.447:0.607,0.339,0.054	1|1:1.327:0.114,0.445,0.441	1|1:2:0,0,1	1|1:1.363:0.112,0.413,0.475	0|0:0.575:0.508,0.409,0.083	0|0:0.433:0.617,0.333,0.05	0|0:0.565:0.515,0.405,0.08	1|1:1.544:0.059,0.337,0.604	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.637:0.034,0.295,0.671	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.558:0.52,0.402,0.078	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.279:0.131,0.46,0.409	1|1:1.287:0.132,0.45,0.418	1|1:1.983:0,0.017,0.983	0|0:0:1,0,0	1|1:2:0,0,1
+3	18265555	SNP-3.18264336.	C	A	.	PASS	AR2=0.99;DR2=0.991;AF=0.362	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0.073:0.927,0.073,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.16:0.848,0.144,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.175:0.833,0.16,0.007	0|0:0:1,0,0	0|0:0.186:0.821,0.172,0.007	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.032,0	0|0:0:1,0,0	0|0:0.161:0.847,0.145,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.107:0.001,0.891,0.108	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.063:0,0.937,0.063	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.255:0.769,0.208,0.024	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0.096:0.907,0.091,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.32:0.698,0.285,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.128:0.887,0.098,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.12:0.884,0.112,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.114:0.89,0.107,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.118:0.885,0.111,0.004	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0
+3	18265571	SNP-3.18264352.	A	G	.	PASS	AR2=0.996;DR2=0.996;AF=0.238	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.902:0.002,0.093,0.905	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.875:0.005,0.114,0.881	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.924:0.002,0.072,0.926	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.813:0.018,0.152,0.83	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.957:0.001,0.041,0.958	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.86:0.005,0.13,0.865	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18266303	SNP-3.18265084.	C	A	.	PASS	AR2=0.998;DR2=0.999;AF=0.318	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.995:0.005,0.995,0	1|1:2:0,0,1	1|1:1.906:0.002,0.09,0.908	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.892:0.003,0.101,0.895	1|1:1.916:0.004,0.077,0.919	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0
+3	18268430	SNP-3.18267211.	C	A	.	PASS	AR2=1;DR2=1;AF=0.327	GT:DS:GP	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.999:0.001,0.999,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.002:0,0.998,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18269402	SNP-3.18268183.	C	A	.	PASS	AR2=0.892;DR2=0.921;AF=0.332	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.239:0.775,0.212,0.014	0|0:0.05:0.951,0.048,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.624:0.419,0.537,0.044	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.36:0.677,0.286,0.037	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.585:0.496,0.423,0.081	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.388:0.636,0.34,0.024	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.189:0.819,0.172,0.009	0|0:0.411:0.62,0.348,0.032	0|0:0.22:0.793,0.194,0.013	0|0:0.225:0.788,0.2,0.012	1|0:1:0,1,0	0|1:1:0,1,0	0|1:0.82:0.363,0.453,0.183	0|0:0.258:0.757,0.228,0.015	0|0:0:1,0,0	1|0:0.363:0.669,0.299,0.032	0|0:0:1,0,0	0|0:0.572:0.513,0.402,0.085	0|0:0:1,0,0	0|0:0.566:0.519,0.397,0.084	0|0:0.388:0.66,0.292,0.048	0|0:0.565:0.528,0.38,0.093	1|0:1:0,1,0	0|0:0.04:0.961,0.039,0.001	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.208:0.805,0.182,0.013	0|0:0.373:0.662,0.302,0.036	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.461:0.583,0.372,0.044	0|1:1:0,1,0	0|0:0.23:0.788,0.194,0.018	0|1:1:0,1,0	1|0:1.347:0.118,0.418,0.464	0|0:0:1,0,0	0|0:0.031:0.969,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.351:0.681,0.287,0.032	0|0:0:1,0,0	0|0:0.352:0.684,0.28,0.036	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.221:0.161,0.457,0.382	0|0:0.035:0.965,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.582:0.054,0.31,0.636	1|1:1.366:0.101,0.432,0.467	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.372:0.662,0.305,0.034	0|0:0:1,0,0	0|0:0.414:0.629,0.328,0.043	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.181:0.828,0.164,0.009	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.155:0.851,0.142,0.007	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.22:0.793,0.193,0.014	0|0:0:1,0,0	1|0:1.419:0.094,0.392,0.514	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.527:0.545,0.383,0.072	1|0:0.958:0.278,0.487,0.235	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.278:0.744,0.234,0.022	0|0:0.031:0.97,0.03,0	0|0:0.003:0.997,0.003,0	0|0:0.237:0.782,0.2,0.018	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.6:0.486,0.428,0.086	0|0:0.085:0.917,0.08,0.002	0|0:0.206:0.805,0.184,0.011	0|0:0:1,0,0	0|0:0.065:0.937,0.062,0.001	1|1:2:0,0,1	0|0:0.066:0.939,0.056,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.066:0.934,0.066,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.104:0.902,0.092,0.006	0|0:0.24:0.775,0.21,0.015	0|0:0:1,0,0	1|0:1.143:0.199,0.459,0.342	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.234:0.78,0.206,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.939,0.061,0	0|0:0.011:0.989,0.011,0	0|0:0.039:0.961,0.038,0.001	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.964,0.036,0.001	0|0:0.33:0.69,0.29,0.02	0|1:0.57:0.508,0.413,0.078	0|0:0:1,0,0	0|0:0.275:0.746,0.233,0.021	0|0:0.048:0.954,0.045,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.232:0.787,0.194,0.019	0|0:0.201:0.812,0.175,0.013	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18270795	SNP-3.18269576.	C	A	.	PASS	AR2=0.952;DR2=0.962;AF=0.256	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.101:0.211,0.477,0.312	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.953,0.047,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.96,0.039,0.001	0|0:0:1,0,0	0|0:0.009:0.992,0.008,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|1:0.919:0.258,0.566,0.177	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.428:0.059,0.454,0.487	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.352:0.087,0.474,0.439	0|0:0.696:0.412,0.48,0.108	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.867:0.013,0.107,0.88	1|1:2:0,0,1	1|1:1.525:0.073,0.329,0.598	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.689:0.047,0.217,0.736	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.636:0.041,0.283,0.677	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.386:0.094,0.427,0.48	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.179:0.174,0.473,0.353	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.898:0.013,0.076,0.911	1|1:1.742:0.022,0.213,0.765	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.899:0.009,0.083,0.908	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.481:0.094,0.33,0.575	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.97,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.248:0.102,0.547,0.351	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.944,0.056,0	0|0:0:1,0,0	0|0:0.013:0.987,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.027,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.63:0.041,0.287,0.672	1|1:1.737:0.03,0.204,0.766	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.202:0.1,0.599,0.302	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.573:0.051,0.325,0.624	0|0:0:1,0,0
+3	18274457	SNP-3.18273238.	A	G	.	PASS	AR2=0.948;DR2=0.957;AF=0.277	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.184:0.824,0.167,0.008	0|0:0:1,0,0	0|0:0.162:0.844,0.15,0.006	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.235:0.776,0.213,0.011	1|1:1.861:0.005,0.129,0.866	0|0:0.174:0.833,0.159,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.622:0.024,0.331,0.645	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.297:0.728,0.248,0.024	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0.196:0.814,0.176,0.01	0|0:0.203:0.805,0.186,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.156:0.851,0.142,0.007	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.145:0.86,0.134,0.006	0|0:0.187:0.821,0.17,0.009	0|0:0.189:0.821,0.169,0.01	1|1:1.951:0.001,0.047,0.952	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.272:0.751,0.226,0.023	0|0:0.067:0.935,0.062,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.661:0.016,0.308,0.676	1|1:1.478:0.066,0.389,0.545	1|1:2:0,0,1	1|1:1.658:0.026,0.29,0.684	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.843:0.007,0.144,0.85	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.935:0.001,0.063,0.936	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.146:0.865,0.124,0.011	1|1:2:0,0,1	0|0:0.046:0.955,0.043,0.001	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.337:0.692,0.279,0.029	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.129:0.88,0.111,0.009	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.217:0.786,0.212,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.151:0.851,0.147,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.954,0.045,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.183:0.818,0.181,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.973:0,0.027,0.973	0|0:0.242:0.772,0.215,0.014	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.015:0.985,0.015,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.964:0.001,0.035,0.964	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.098:0.908,0.086,0.006	0|0:0.147:0.859,0.135,0.006	0|0:0.254:0.769,0.208,0.023	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.961:0.001,0.037,0.962	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.3:0.724,0.252,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0.242:0.774,0.21,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.208:0.801,0.19,0.009	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.021:0.98,0.02,0	0|0:0.022:0.979,0.021,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.26:0.757,0.227,0.017	1|1:1.961:0.001,0.038,0.962	0|0:0:1,0,0	1|1:1.743:0.002,0.254,0.745	0|0:0.267:0.752,0.228,0.019	0|0:0.219:0.795,0.191,0.014	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.646:0.026,0.303,0.672	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.089:0.915,0.082,0.003	0|0:0:1,0,0	0|0:0.151:0.855,0.139,0.006	0|0:0:1,0,0	0|0:0.171:0.837,0.155,0.008	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.099:0.905,0.091,0.004	0|0:0:1,0,0	0|0:0.096:0.907,0.089,0.004	0|0:0.06:0.941,0.057,0.001	1|1:2:0,0,1	0|0:0.062:0.939,0.06,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.966,0.032,0.001	0|0:0:1,0,0	0|0:0.018:0.983,0.017,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1
+3	18277824	SNP-3.18276605.	C	A	.	PASS	AR2=0.982;DR2=0.988;AF=0.371	GT:DS:GP	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.95,0.05,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.026,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.159:0.851,0.139,0.01	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.175:0.834,0.157,0.009	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:0.358:0.675,0.291,0.034	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.167:0.842,0.148,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.064:0.001,0.934,0.065	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.115:0.004,0.877,0.119	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.219:0.795,0.19,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.32:0.709,0.262,0.029	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.952,0.047,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.955:0.423,0.199,0.378	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.211:0.801,0.186,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18278591	SNP-3.18277372.	A	G	.	PASS	AR2=0.985;DR2=0.989;AF=0.345	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.617:0.552,0.279,0.169	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.425:0.608,0.358,0.033	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.408:0.623,0.345,0.032	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.192:0.818,0.173,0.009	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0.653:0.434,0.479,0.087	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.954:0.102,0.842,0.056	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.859:0.356,0.428,0.215	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	18278747	SNP-3.18277528.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.249	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.952:0.001,0.047,0.953	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.969:0,0.031,0.969	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.957:0.001,0.041,0.958	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18279472	SNP-3.18278253.	A	G	.	PASS	AR2=0.958;DR2=0.966;AF=0.294	GT:DS:GP	1|1:1.878:0.003,0.116,0.881	0|0:0:1,0,0	0|0:0.229:0.784,0.203,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.059:0.942,0.057,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.245:0.769,0.217,0.014	1|1:2:0,0,1	0|0:0.184:0.826,0.165,0.01	0|0:0.211:0.801,0.187,0.012	0|0:0.232:0.781,0.205,0.013	0|0:0:1,0,0	0|0:0.226:0.788,0.198,0.014	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.857:0.004,0.136,0.861	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.162:0.847,0.144,0.009	0|0:0:1,0,0	0|0:0.084:0.922,0.071,0.006	1|1:1.781:0.012,0.195,0.793	1|1:1.811:0.009,0.171,0.82	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.724:0.019,0.238,0.743	1|1:1.906:0.003,0.088,0.909	1|1:1.762:0.016,0.205,0.779	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.883:0.004,0.109,0.887	0|0:0.157:0.848,0.146,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.8:0.01,0.18,0.81	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.782:0.009,0.201,0.791	0|0:0.293:0.716,0.274,0.009	1|1:2:0,0,1	1|1:1.567:0.035,0.364,0.602	1|1:1.787:0.004,0.206,0.791	1|1:1.833:0.008,0.15,0.842	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.11:0.892,0.107,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0.035:0.965,0.034,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.54:0.039,0.383,0.579	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.183:0.82,0.177,0.003	0|0:0:1,0,0	0|0:0.175:0.827,0.171,0.002	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.074:0.928,0.07,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.957,0.042,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.13:0.875,0.121,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.777:0.013,0.197,0.79	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.263:0.754,0.228,0.017	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.465:0.594,0.347,0.059	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.921:0.003,0.074,0.924	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.784:0.01,0.197,0.794	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.829:0.006,0.159,0.835	1|1:1.775:0.014,0.198,0.788	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.784:0.01,0.196,0.794	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.762:0.006,0.227,0.768	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.09:0.915,0.079,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	18281115	SNP-3.18279896.	C	A	.	PASS	AR2=0.983;DR2=0.986;AF=0.339	GT:DS:GP	0|0:0.111:0.892,0.106,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.259:0.76,0.222,0.018	1|0:1:0,1,0	0|0:0.33:0.697,0.275,0.028	0|0:0:1,0,0	0|0:0.227:0.786,0.201,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0.14:0.865,0.131,0.005	0|0:0:1,0,0	0|0:0.043:0.957,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.109:0.894,0.102,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.076:0.926,0.072,0.002	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	0|1:0.909:0.098,0.895,0.007	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.628:0.021,0.329,0.649	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.862:0.004,0.131,0.866	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:1.67:0.03,0.27,0.7	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.85:0.006,0.137,0.856	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.112:0.892,0.104,0.004	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.122:0.878,0.122,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.137:0.869,0.126,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.943,0.057,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.062:0.939,0.06,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.906,0.091,0.003	0|0:0:1,0,0	0|0:0.244:0.777,0.203,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.016,0.983	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18283201	SNP-3.18281982.	C	A	.	PASS	AR2=0.95;DR2=0.961;AF=0.42	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.235:0.779,0.208,0.014	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0.23:0.784,0.203,0.013	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.255:0.761,0.223,0.016	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.235:0.779,0.207,0.014	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.238:0.777,0.208,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.232:0.781,0.205,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.34:0.688,0.284,0.028	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.324:0.702,0.271,0.026	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.446:0.604,0.346,0.05	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.316:0.709,0.266,0.025	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.221:0.794,0.192,0.014	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.26:0.757,0.225,0.017	1|1:2:0,0,1	0|0:0.349:0.679,0.293,0.028	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.148:0.856,0.141,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.068:0.934,0.064,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.269:0.749,0.233,0.018	0|0:0:1,0,0	0|0:0.068:0.934,0.064,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.363:0.67,0.296,0.034	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.245:0.77,0.215,0.015	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.367:0.666,0.3,0.033	0|0:0:1,0,0	0|0:0.381:0.656,0.308,0.037	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.241:0.773,0.212,0.014	0|0:0.234:0.781,0.204,0.015	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.22:0.793,0.195,0.012	0|0:0.372:0.663,0.302,0.035	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.237:0.778,0.208,0.014	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.37:0.663,0.303,0.034	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.467:0.592,0.349,0.059	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.361:0.672,0.295,0.033	0|0:0.244:0.771,0.214,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.237:0.778,0.207,0.015	0|0:0.256:0.763,0.218,0.019	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.366:0.668,0.298,0.034	0|0:0:1,0,0	0|0:0.361:0.672,0.295,0.033	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.406:0.634,0.325,0.04	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.068:0.934,0.064,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18284753	SNP-3.18283534.	A	G	.	PASS	AR2=0.985;DR2=0.988;AF=0.227	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.805:0.01,0.175,0.815	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.774:0.008,0.21,0.782	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.733:0.02,0.226,0.753	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.758:0.017,0.208,0.775	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.948,0.052,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.147:0.855,0.143,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.934:0.002,0.063,0.935	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.335:0.711,0.244,0.045	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.76:0.017,0.206,0.777	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.944:0.001,0.055,0.945	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.719:0.022,0.238,0.741	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.94:0.001,0.057,0.941	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18286194	SNP-3.18284975.	A	G	.	PASS	AR2=0.996;DR2=0.996;AF=0.335	GT:DS:GP	1|1:1.965:0,0.034,0.966	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.915:0.001,0.082,0.917	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.85:0.003,0.143,0.853	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.924:0.001,0.074,0.925	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.938:0.001,0.06,0.939	1|1:1.976:0,0.023,0.976	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.814:0.011,0.164,0.825	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.926:0.002,0.071,0.927	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.852:0.148,0.852,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	18289270	SNP-3.18288051.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.338	GT:DS:GP	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1	0|0:0.038:0.963,0.037,0.001	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.959,0.041,0.001	0|0:0.012:0.989,0.011,0	0|0:0.049:0.952,0.048,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.086:0.916,0.082,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.961,0.039,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.043:0.957,0.043,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.959,0.04,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.053:0.948,0.052,0.001	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0.044:0.956,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18289941	SNP-3.18288722.	A	G	.	PASS	AR2=0.989;DR2=0.991;AF=0.33	GT:DS:GP	1|1:1.892:0.003,0.102,0.895	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.811:0.011,0.167,0.822	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.774:0.013,0.199,0.787	1|1:1.776:0.013,0.198,0.789	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.718:0.019,0.245,0.736	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.749:0.016,0.219,0.765	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.786:0.011,0.193,0.797	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.786:0.01,0.194,0.796	1|1:2:0,0,1	1|0:0.85:0.152,0.846,0.002	1|1:1.806:0.01,0.174,0.816	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.931:0.091,0.888,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.949:0.003,0.046,0.952	0|0:0:1,0,0	1|1:2:0,0,1
+3	18291412	SNP-3.18290193.	C	A	.	PASS	AR2=0.978;DR2=0.981;AF=0.367	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.12:0.884,0.112,0.004	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.134:0.871,0.124,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.107:0.896,0.102,0.003	0|0:0.152:0.854,0.14,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.091:0.911,0.087,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.109:0.895,0.101,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.127:0.878,0.118,0.005	0|0:0.117:0.886,0.111,0.003	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.182:0.822,0.174,0.004	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.218:0.794,0.194,0.012	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.175:0.833,0.159,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.116:0.886,0.112,0.002	0|0:0:1,0,0	0|0:0.131:0.872,0.126,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.035:0.967,0.032,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0.253:0.764,0.219,0.017	1|1:2:0,0,1	0|1:1.087:0,0.913,0.087	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.155:0.852,0.142,0.007	1|1:2:0,0,1	0|0:0.114:0.888,0.11,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.053:0.948,0.052,0.001	0|0:0:1,0,0	0|0:0.062:0.939,0.06,0.001	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.276:0.744,0.236,0.02	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.931,0.067,0.001	0|0:0.185:0.826,0.162,0.012	0|0:0.129:0.876,0.12,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.153:0.852,0.142,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.276:0.744,0.236,0.02	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.12:0.884,0.112,0.004	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.208:0.803,0.185,0.011	0|0:0:1,0,0	0|0:0.148:0.858,0.136,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.106:0.897,0.1,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.079:0.923,0.075,0.002	0|0:0:1,0,0	0|0:0.187:0.822,0.17,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18292401	SNP-3.18291182.	C	A	.	PASS	AR2=0.896;DR2=0.918;AF=0.254	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.745:0.046,0.162,0.792	0|0:0.227:0.78,0.212,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.774:0.342,0.541,0.116	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.09:0.913,0.084,0.003	0|0:0.259:0.758,0.225,0.017	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.935,0.059,0.006	0|0:0:1,0,0	0|0:0.345:0.684,0.287,0.029	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.251:0.765,0.22,0.016	0|0:0.245:0.77,0.215,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.234:0.779,0.207,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.931,0.067,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.958,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.851:0.009,0.132,0.859	0|0:0.203:0.818,0.162,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.851:0.007,0.135,0.858	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.747:0.023,0.208,0.77	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.968:0.201,0.629,0.17	0|0:0:1,0,0	0|0:0.417:0.632,0.319,0.049	0|0:0:1,0,0	0|1:0.847:0.367,0.418,0.215	1|0:1.069:0.097,0.737,0.166	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.009:0.114,0.763,0.123	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.94:0.265,0.531,0.205	0|0:0:1,0,0	1|1:1.062:0.422,0.093,0.485	0|1:0.906:0.143,0.809,0.049	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.159:0.089,0.664,0.247	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.845:0.271,0.612,0.116	0|0:0:1,0,0	1|0:0.748:0.376,0.501,0.123	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.263:0.064,0.608,0.328	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.207:0.192,0.41,0.399	1|1:2:0,0,1	1|0:1.315:0.095,0.495,0.41	1|1:2:0,0,1	0|0:0.825:0.426,0.322,0.252	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.531:0.059,0.35,0.591	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.521:0.064,0.35,0.586	0|0:0:1,0,0	0|0:0.222:0.791,0.196,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.133:0.87,0.127,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.087:0.915,0.084,0.002	0|0:0.255:0.761,0.222,0.017	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.261:0.113,0.513,0.374	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.255:0.761,0.223,0.016	0|0:0:1,0,0	0|0:0.242:0.773,0.213,0.015	0|0:0:1,0,0	0|0:0.032:0.968,0.032,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|1:1.298:0.105,0.492,0.403	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.929,0.069,0.002	0|0:0:1,0,0	0|0:0.297:0.723,0.257,0.02	1|1:2:0,0,1	0|0:0.056:0.945,0.054,0.001	0|0:0.275:0.757,0.211,0.032	0|0:0:1,0,0	1|0:1.195:0.113,0.58,0.307	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.962,0.037,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.783:0.02,0.177,0.803	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.581:0.064,0.291,0.645	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.096:0.906,0.092,0.002	0|0:0.041:0.96,0.039,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.101:0.901,0.097,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.317:0.011,0.66,0.328	0|0:0.206:0.815,0.165,0.021	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.224:0.789,0.197,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.963,0.036,0.001
+3	18299589	SNP-3.18298370.	C	A	.	PASS	AR2=0.96;DR2=0.974;AF=0.371	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.39:0.649,0.313,0.038	1|1:2:0,0,1	0|0:0.454:0.571,0.404,0.025	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.156:0.851,0.142,0.007	0|0:0.359:0.672,0.296,0.032	1|0:1:0,1,0	0|0:0.012:0.988,0.012,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.01:0.99,0.01,0	1|0:1:0,1,0	0|0:0.434:0.616,0.335,0.05	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.397:0.642,0.32,0.039	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.368:0.668,0.296,0.036	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.235:0.78,0.204,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.467:0.581,0.37,0.049	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.389:0.646,0.318,0.036	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.021:0.979,0.02,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.429:0.615,0.342,0.043	0|1:0.419:0.596,0.389,0.015	1|0:0.479:0.578,0.366,0.056	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.6:0.482,0.435,0.083	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.528:0.539,0.395,0.067	0|0:0:1,0,0	0|0:0.571:0.504,0.421,0.075	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.024:0.977,0.023,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.024:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.579:0.523,0.376,0.102	0|0:0.039:0.961,0.038,0.001	0|0:0.164:0.85,0.136,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18299632	SNP-3.18298413.	A	G	.	PASS	AR2=1;DR2=1;AF=0.202	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.949:0.001,0.049,0.95	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18299669	SNP-3.18298450.	A	G	.	PASS	AR2=0.923;DR2=0.945;AF=0.283	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.965,0.034,0.001	0|0:0.224:0.789,0.198,0.013	0|0:0.298:0.726,0.251,0.023	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.204:0.81,0.177,0.013	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.264:0.752,0.231,0.016	0|0:0:1,0,0	0|0:0.248:0.769,0.215,0.017	0|0:0.123:0.879,0.119,0.002	0|0:0.325:0.701,0.273,0.026	0|0:0.326:0.7,0.274,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	0|1:1.44:0.079,0.402,0.519	0|1:1:0,1,0	1|1:1.62:0.043,0.294,0.663	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.88:0.004,0.111,0.884	1|1:2:0,0,1	0|0:0.398:0.634,0.334,0.032	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.41:0.634,0.323,0.044	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.957,0.043,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.979,0.021,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.302:0.723,0.252,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.972,0.028,0	0|0:0:1,0,0	0|0:0.49:0.573,0.365,0.063	0|0:0.031:0.97,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.376:0.657,0.31,0.033	0|0:0.405:0.634,0.328,0.038	1|1:1.594:0.04,0.326,0.634	0|0:0.49:0.572,0.365,0.063	1|1:2:0,0,1	0|1:0.589:0.466,0.479,0.055	0|0:0.407:0.632,0.33,0.039	1|0:0.505:0.561,0.373,0.066	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.252:0.154,0.441,0.405	0|1:1.01:0,0.99,0.01	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.351:0.681,0.287,0.032	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.458:0.594,0.355,0.052	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0.243:0.773,0.211,0.016	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.343:0.687,0.282,0.031	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.548:0.058,0.336,0.606	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|0:0.487:0.575,0.364,0.062	0|0:0:1,0,0	1|1:1.791:0.003,0.203,0.794	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.348:0.68,0.292,0.028	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.467:0.033,0.467,0.5	1|1:1.94:0.002,0.056,0.942	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.067:0.935,0.063,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.97,0.029,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18300383	SNP-3.18299164.	C	A	.	PASS	AR2=0.963;DR2=0.975;AF=0.283	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.677:0.033,0.257,0.71	1|1:2:0,0,1	1|1:1.299:0.126,0.449,0.425	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.358:0.103,0.437,0.46	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1.372:0.099,0.43,0.471	1|1:1.307:0.123,0.448,0.43	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.489:0.059,0.394,0.548	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.63:0.375,0.62,0.005	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.399:0.095,0.411,0.494	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.279:0.134,0.454,0.412	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.28:0.135,0.45,0.415	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.508:0.058,0.376,0.566	1|1:2:0,0,1	1|1:1.881:0.007,0.106,0.888	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.957:0.001,0.04,0.958	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.948:0.002,0.048,0.95	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	18301062	SNP-3.18299843.	C	A	.	PASS	AR2=0.991;DR2=0.992;AF=0.409	GT:DS:GP	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.368:0.655,0.322,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.101:0.903,0.094,0.004	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.124:0.88,0.115,0.004	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.177:0.167,0.49,0.343	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.923,0.074,0.003	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.26:0.14,0.46,0.4	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.091:0.913,0.084,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.077:0.925,0.073,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18305619	SNP-3.18304400.	A	G	.	PASS	AR2=0.985;DR2=0.99;AF=0.294	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.533:0.516,0.434,0.05	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.545:0.513,0.43,0.057	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.754:0.392,0.463,0.145	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.41:0.001,0.589,0.41	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.762:0.384,0.469,0.147	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18310618	SNP-3.18309399.	C	A	.	PASS	AR2=0.974;DR2=0.98;AF=0.392	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.019:0.078,0.825,0.097	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.398:0.64,0.321,0.039	0|1:1:0,1,0	0|0:0:1,0,0	1|0:0.499:0.556,0.389,0.055	0|1:1:0,1,0	0|0:0.281:0.741,0.237,0.022	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.165:0.839,0.156,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.97:0,0.03,0.97	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1.002:0,0.998,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.044:0.197,0.562,0.241	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.271:0.749,0.231,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1.028:0.153,0.665,0.181	0|0:0:1,0,0	0|1:0.864:0.286,0.563,0.15	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.482:0.581,0.357,0.063	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0.054:0.947,0.052,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.371:0.662,0.306,0.032	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.513:0.556,0.375,0.069	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.96,0.04,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.189:0.817,0.176,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.173:0.837,0.152,0.01	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18310792	SNP-3.18309573.	A	G	.	PASS	AR2=0.959;DR2=0.97;AF=0.472	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.137:0.869,0.125,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.971:0,0.029,0.971	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.063:0.937,0.063,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.306:0.007,0.681,0.313	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.742:0.021,0.215,0.763	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	1|1:1.73:0.022,0.226,0.752	1|1:2:0,0,1	1|1:1.745:0.021,0.212,0.766	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.385:0.086,0.442,0.472	1|1:2:0,0,1	0|0:0.128:0.872,0.128,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.966:0,0.033,0.967	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.026,0.974	1|1:2:0,0,1	1|0:1.125:0.012,0.852,0.136	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.042:0.958,0.042,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.929,0.071,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.534:0.466,0.534,0	0|0:0.009:0.991,0.009,0	0|0:0.638:0.362,0.638,0	1|1:1.649:0.008,0.334,0.657	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.357:0.645,0.353,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.072:0.213,0.503,0.285	0|0:0:1,0,0	1|1:1.961:0,0.039,0.961	0|0:0:1,0,0	1|0:1.309:0.168,0.354,0.478	0|0:0.123:0.877,0.123,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.952:0,0.048,0.952	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.234:0.149,0.468,0.383	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.135:0.044,0.776,0.179	1|1:1.892:0.008,0.092,0.9	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.142:0.864,0.13,0.006	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.174:0.833,0.161,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.22:0.794,0.193,0.013	1|1:2:0,0,1	0|0:0.79:0.329,0.552,0.119	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.789:0.024,0.163,0.813	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.95:0.001,0.048,0.951	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.188:0.252,0.308,0.44	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.956:0.001,0.043,0.956	0|0:0:1,0,0	1|1:1.787:0,0.213,0.787	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.955:0,0.045,0.955	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.936:0.001,0.062,0.937	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.943:0.001,0.055,0.944	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.748:0.021,0.21,0.769	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	18318196	SNP-3.18316977.	C	A	.	PASS	AR2=1;DR2=1;AF=0.331	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18318613	SNP-3.18317394.	A	G	.	PASS	AR2=0.87;DR2=0.898;AF=0.25	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.175:0.854,0.116,0.029	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.9:0.283,0.535,0.183	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.855:0.343,0.46,0.197	1|1:1.323:0.127,0.422,0.45	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.921:0.292,0.495,0.213	0|1:0.684:0.44,0.436,0.124	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.018:0.241,0.5,0.259	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.369:0.107,0.417,0.476	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.172:0.2,0.429,0.372	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.044:0.957,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.908:0.274,0.544,0.182	1|0:0.836:0.326,0.512,0.162	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.017:0.983,0.017,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.053:0.948,0.052,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.063:0.163,0.611,0.226	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.185:0.821,0.172,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.403:0.63,0.338,0.032	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.143:0.862,0.133,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.383:0.621,0.376,0.004	0|0:0:1,0,0	0|0:0.5:0.5,0.5,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.035,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.063:0.938,0.061,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.11:0.891,0.108,0.001	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.959,0.041,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.186:0.822,0.171,0.008	1|1:1.318:0.116,0.45,0.434	1|1:2:0,0,1	0|1:0.914:0.291,0.505,0.204	0|0:0:1,0,0	0|0:0.135:0.87,0.125,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.281:0.139,0.44,0.421	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.088:0.211,0.49,0.299	0|0:0.508:0.599,0.295,0.107	1|1:2:0,0,1	1|0:0.949:0.274,0.502,0.223	0|1:0.603:0.475,0.448,0.078	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.167:0.262,0.309,0.429	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.465:0.568,0.398,0.033	0|0:0.546:0.517,0.421,0.063	0|0:0.766:0.368,0.499,0.133	0|0:0:1,0,0	0|1:0.735:0.374,0.517,0.109	1|1:2:0,0,1	0|1:0.611:0.458,0.473,0.069	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	1|0:0.72:0.425,0.431,0.145	0|0:0.125:0.877,0.12,0.003	0|0:0:1,0,0	0|0:0.47:0.607,0.316,0.077	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.047:0.238,0.477,0.285	0|1:1.011:0.257,0.475,0.268	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.368:0.633,0.366,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.038:0.176,0.61,0.214	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.126:0.885,0.105,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.984:0.262,0.492,0.246	0|0:0:1,0,0	0|0:0.047:0.954,0.046,0.001	1|1:2:0,0,1	0|0:0.035:0.965,0.034,0	0|0:0.119:0.886,0.109,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.338:0.022,0.618,0.36	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.34:0.104,0.451,0.445	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.987:0.261,0.492,0.248	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	18318628	SNP-3.18317409.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.343	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.936,0.063,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.06:0.941,0.057,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.955,0.045,0.001	0|0:0.08:0.922,0.076,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18319097	SNP-3.18317878.	C	A	.	PASS	AR2=1;DR2=1;AF=0.339	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18319439	SNP-3.18318220.	A	G	.	PASS	AR2=0.992;DR2=0.993;AF=0.231	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.807:0.01,0.172,0.818	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.874:0.006,0.114,0.88	1|1:2:0,0,1	1|1:1.878:0.005,0.112,0.883	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.906:0.003,0.089,0.908	1|1:1.768:0.015,0.202,0.783	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.92:0.003,0.074,0.923	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.833:0.008,0.152,0.841	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.848:0.006,0.139,0.854	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.856:0.006,0.132,0.862	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18328011	SNP-3.18326792.	A	G	.	PASS	AR2=0.985;DR2=0.987;AF=0.249	GT:DS:GP	1|1:2:0,0,1	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.848:0.008,0.136,0.856	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.899:0.004,0.094,0.903	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.782:0.014,0.19,0.796	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.799:0.01,0.182,0.809	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|1:1.891:0.002,0.104,0.894	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.024,0	0|0:0:1,0,0	0|1:0.681:0.43,0.459,0.111	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.11:0.893,0.104,0.003	0|0:0.057:0.944,0.056,0.001	0|0:0.277:0.735,0.252,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.13:0.874,0.121,0.005	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.84:0.004,0.151,0.845	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.864:0.008,0.12,0.872	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.763:0.016,0.206,0.779	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.968,0.031,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18333137	SNP-3.18331918.	A	G	.	PASS	AR2=0.999;DR2=1;AF=0.348	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.887:0.003,0.107,0.89	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	18341760	SNP-3.18340541.	A	G	.	PASS	AR2=0.997;DR2=0.998;AF=0.27	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.572:0.042,0.344,0.614	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18347733	SNP-3.18346514.	A	G	.	PASS	AR2=1;DR2=1;AF=0.354	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	18364447	SNP-3.18363228.	A	G	.	PASS	AR2=0.937;DR2=0.953;AF=0.402	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.021:0.979,0.02,0	1|1:1.947:0,0.052,0.948	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.254:0.764,0.217,0.019	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.943:0.001,0.055,0.944	0|0:0:1,0,0	1|1:1.83:0.006,0.157,0.837	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.895:0.004,0.097,0.899	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.935:0,0.064,0.936	1|1:1.917:0.002,0.079,0.919	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.361:0.004,0.631,0.365	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.303:0.724,0.249,0.027	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.313:0.712,0.262,0.026	0|0:0.294:0.728,0.25,0.022	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.276:0.744,0.237,0.019	0|0:0.139:0.866,0.129,0.005	0|0:0:1,0,0	0|0:0.15:0.857,0.136,0.007	0|0:0:1,0,0	0|0:0.117:0.886,0.11,0.004	1|1:2:0,0,1	0|0:0.434:0.597,0.371,0.031	0|0:0:1,0,0	0|1:0.611:0.425,0.54,0.036	0|0:0.267:0.752,0.23,0.018	1|1:1.962:0.001,0.037,0.963	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.235:0.781,0.204,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.31:0.706,0.278,0.016	0|0:0.25:0.767,0.216,0.017	0|0:0.62:0.509,0.363,0.129	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.94,0.059,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.119:0.886,0.11,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.163:0.837,0.163,0	0|0:0.248:0.793,0.165,0.041	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.946,0.051,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.952,0.046,0.002	0|0:0:1,0,0	0|0:0.045:0.956,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.024,0.001	0|0:0.146:0.862,0.13,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.338:0.692,0.279,0.03	0|0:0.076:0.926,0.072,0.002	0|0:0.275:0.742,0.242,0.016	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.901:0.004,0.092,0.904	0|0:0:1,0,0	0|0:0.697:0.446,0.412,0.142	1|1:2:0,0,1	0|0:0.303:0.72,0.257,0.023	1|1:2:0,0,1	0|0:0.287:0.728,0.258,0.015	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.663:0.034,0.27,0.697	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.913:0.003,0.08,0.917	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.926:0.002,0.071,0.928	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.396:0.653,0.298,0.049	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.444:0.048,0.46,0.492	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.914:0.002,0.083,0.915	1|1:2:0,0,1	0|0:0.279:0.74,0.241,0.019	0|0:0.574:0.484,0.459,0.058	0|0:0:1,0,0	1|1:1.929:0,0.071,0.929	1|1:2:0,0,1	0|1:0.535:0.543,0.379,0.078	0|0:0.324:0.701,0.273,0.025	0|0:0:1,0,0	0|0:0.461:0.588,0.362,0.049	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.962:0.001,0.037,0.962	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.252:0.766,0.217,0.017	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.177:0.833,0.157,0.01	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.352:0.677,0.295,0.029	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.963:0.002,0.033,0.965	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.112:0.898,0.093,0.01	0|0:0:1,0,0	0|0:0.15:0.853,0.143,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.072:0.931,0.065,0.003	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.077:0.926,0.071,0.003
+3	18372495	SNP-3.18371276.	C	A	.	PASS	AR2=1;DR2=1;AF=0.344	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18372682	SNP-3.18371463.	A	G	.	PASS	AR2=1;DR2=1;AF=0.249	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18373365	SNP-3.18372146.	C	A	.	PASS	AR2=0.979;DR2=0.982;AF=0.443	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0.123:0.882,0.113,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.1:0.902,0.097,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.158:0.848,0.146,0.006	0|0:0:1,0,0	0|0:0.171:0.836,0.156,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.165:0.842,0.151,0.007	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1.069:0.001,0.93,0.069	0|0:0:1,0,0	0|0:0.109:0.895,0.1,0.005	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.027:0.973,0.027,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.116:0.888,0.107,0.005	1|1:2:0,0,1	0|1:1.109:0,0.891,0.109	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.144:0.862,0.133,0.005	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.026:0.975,0.025,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.159:0.848,0.145,0.007	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.167:0.84,0.152,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.165:0.842,0.15,0.007	0|0:0.073:0.929,0.069,0.002	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.126:0.879,0.116,0.005	0|0:0.163:0.853,0.131,0.016	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.663:0.025,0.287,0.688	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.14:0.865,0.13,0.005	0|0:0.121:0.883,0.113,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.156:0.851,0.143,0.006	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.153:0.853,0.142,0.006	0|0:0.023:0.977,0.023,0	0|0:0.057:0.944,0.056,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.112:0.89,0.108,0.002	0|0:0.156:0.851,0.143,0.006	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0.072:0.93,0.069,0.001	0|1:1:0,1,0	0|0:0.133:0.87,0.127,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.084:0.917,0.081,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.104:0.898,0.099,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.946,0.054,0.001	0|0:0:1,0,0	0|0:0.14:0.865,0.13,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.96,0.04,0	0|0:0:1,0,0	0|0:0.029:0.971,0.028,0.001	0|0:0:1,0,0	0|0:0.138:0.87,0.122,0.008	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.164:0.853,0.131,0.017	0|0:0.131:0.874,0.121,0.005	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.051:0.95,0.049,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18390010	SNP-3.18388791.	A	G	.	PASS	AR2=0.97;DR2=0.979;AF=0.25	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.874:0,0.125,0.875	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.613:0.035,0.318,0.648	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.467:0.076,0.381,0.543	1|1:1.571:0.043,0.342,0.614	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1.552:0.05,0.348,0.602	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.498:0.073,0.356,0.571	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.945,0.05,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.075:0.929,0.067,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.043:0.959,0.038,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.52:0.057,0.365,0.577	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.15:0.861,0.129,0.011	0|0:0.059:0.945,0.051,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0.038:0.962,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.935:0.002,0.062,0.937	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.9:0.004,0.092,0.904	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:1.316:0.25,0.183,0.566	0|0:0:1,0,0	0|0:0:1,0,0
+3	18407077	SNP-3.18405858.	C	A	.	PASS	AR2=0.982;DR2=0.987;AF=0.326	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.505:0.555,0.385,0.06	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.936:0.228,0.608,0.164	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.735:0.011,0.244,0.745	1|1:2:0,0,1	1|0:1.479:0.061,0.398,0.54	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.7:0.001,0.299,0.7	1|1:1.985:0,0.015,0.985	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.956:0.002,0.041,0.958	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	1|1:1.744:0,0.255,0.744	1|1:2:0,0,1	1|1:1.828:0.006,0.159,0.834	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.585:0.495,0.425,0.08	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.967:0,0.033,0.967	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.929:0.006,0.059,0.935	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.225:0.066,0.642,0.292	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.982:0,0.017,0.983	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18407351	SNP-3.18406132.	C	A	.	PASS	AR2=0.967;DR2=0.973;AF=0.408	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.132:0.874,0.12,0.006	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.268:0.757,0.218,0.025	0|0:0:1,0,0	0|0:0.15:0.856,0.138,0.006	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.392:0.649,0.311,0.041	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.045:0.955,0.045,0	0|0:0.116:0.885,0.113,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.196:0.814,0.176,0.01	0|0:0:1,0,0	0|0:0.21:0.8,0.19,0.01	0|0:0.175:0.833,0.16,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.215:0.796,0.192,0.011	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.116:0.886,0.113,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.323:0.705,0.267,0.028	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0.414:0.622,0.341,0.036	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.172:0.833,0.163,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.95,0.05,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.26:0.757,0.227,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.301:0.723,0.252,0.024	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.296:0.726,0.251,0.023	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.229:0.785,0.201,0.014	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.074:0.926,0.073,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.2:0.812,0.175,0.013	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.228:0.786,0.2,0.014	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.173:0.835,0.157,0.008	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.299:0.72,0.261,0.019	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.202:0.809,0.18,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.163:0.846,0.146,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.218:0.796,0.19,0.014	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.002:0.998,0.002,0	0|0:0.189:0.82,0.172,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.145:0.86,0.136,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.067:0.935,0.064,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0.26:0.756,0.227,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.156:0.86,0.124,0.016	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.143:0.864,0.129,0.007	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18408572	SNP-3.18407353.	C	A	.	PASS	AR2=0.987;DR2=0.989;AF=0.404	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.123:0.881,0.116,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.089:0.914,0.084,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.144:0.861,0.134,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.167:0.84,0.153,0.007	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.191:0.818,0.173,0.009	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.18:0.828,0.163,0.009	0|0:0.235:0.779,0.207,0.014	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.132:0.871,0.126,0.003	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.967,0.033,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.516:0.559,0.366,0.075	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.181:0.835,0.149,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.205:0.805,0.185,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.034:0.967,0.033,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.2:0.809,0.183,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.18:0.828,0.163,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18408752	SNP-3.18407533.	C	A	.	PASS	AR2=0.974;DR2=0.98;AF=0.403	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.038:0.963,0.036,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.12:0.886,0.108,0.006	0|0:0.071:0.93,0.069,0.001	0|0:0.083:0.918,0.081,0.001	1|1:2:0,0,1	0|0:0.106:0.897,0.1,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.343:0.68,0.296,0.023	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:0.528:0.529,0.414,0.057	0|0:0:1,0,0	0|0:0.116:0.887,0.11,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.084:0.919,0.079,0.003	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.327:0.701,0.271,0.028	0|0:0.45:0.574,0.401,0.025	1|0:1:0,1,0	0|0:0.083:0.918,0.081,0.001	0|0:0.136:0.87,0.124,0.006	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0.063:0.939,0.059,0.002	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.364:0.681,0.274,0.045	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.31:0.716,0.257,0.027	0|0:0:1,0,0	0|0:0.343:0.688,0.281,0.031	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.15:0.856,0.139,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.096:0.907,0.091,0.002	0|0:0.082:0.918,0.081,0.001	0|0:0.105:0.898,0.099,0.003	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.07:0.931,0.069,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.34:0.69,0.281,0.029	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.014:0.986,0.014,0	1|1:2:0,0,1	0|0:0.096:0.906,0.093,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.298:0.728,0.246,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.959,0.04,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.128:0.876,0.12,0.004	0|1:1:0,1,0	0|0:0.082:0.92,0.078,0.002	0|0:0:1,0,0	0|0:0.045:0.958,0.04,0.003	0|0:0:1,0,0	0|0:0.098:0.904,0.095,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.094:0.91,0.085,0.004	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18409058	SNP-3.18407839.	C	A	.	PASS	AR2=0.981;DR2=0.984;AF=0.404	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.292:0.734,0.239,0.026	0|0:0.17:0.839,0.151,0.01	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.071:0.929,0.071,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.778:0.254,0.714,0.032	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.946,0.053,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.943,0.055,0.001	0|0:0:1,0,0	0|1:0.87:0.327,0.476,0.197	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.317:0.7,0.282,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.131:0.871,0.126,0.003	0|0:0.154:0.852,0.141,0.006	0|1:1:0,1,0	0|0:0.076:0.926,0.073,0.001	0|0:0:1,0,0	0|0:0.094:0.909,0.089,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.083:0.919,0.079,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.055:0.945,0.054,0.001	0|0:0.144:0.862,0.131,0.006	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.356:0.709,0.227,0.064	0|0:0.072:0.929,0.069,0.001	0|0:0.37:0.668,0.294,0.038	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.239:0.775,0.212,0.013	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.035:0.965,0.034,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.294:0.721,0.264,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.062:0.939,0.059,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18409330	SNP-3.18408111.	A	G	.	PASS	AR2=0.878;DR2=0.902;AF=0.308	GT:DS:GP	0|0:0.318:0.704,0.274,0.022	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.951:0.176,0.698,0.126	0|1:0.851:0.312,0.524,0.164	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.195:0.167,0.47,0.363	0|0:0:1,0,0	0|0:0.69:0.494,0.321,0.184	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.324:0.103,0.47,0.427	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.797:0.355,0.492,0.153	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.445:0.084,0.387,0.529	1|1:2:0,0,1	0|0:0.372:0.668,0.292,0.04	0|1:1.092:0.2,0.507,0.292	1|1:2:0,0,1	0|0:0.546:0.555,0.344,0.101	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.346:0.685,0.284,0.031	1|1:2:0,0,1	0|0:0.879:0.323,0.476,0.201	1|1:2:0,0,1	0|1:0.999:0.242,0.517,0.241	0|0:0:1,0,0	0|0:0.164:0.844,0.149,0.008	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.3:0.724,0.252,0.024	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.157:0.181,0.481,0.338	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.067:0.22,0.493,0.287	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.761:0.38,0.478,0.142	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.585:0.46,0.495,0.045	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.83:0.347,0.475,0.178	0|0:0:1,0,0	0|1:1.086:0.237,0.441,0.323	0|0:0:1,0,0	0|0:0.899:0.313,0.475,0.212	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.484:0.571,0.375,0.055	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.79:0.36,0.491,0.15	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.225:0.795,0.185,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.828:0.348,0.476,0.176	0|0:0:1,0,0	1|0:1.021:0.185,0.609,0.206	0|0:0:1,0,0	0|0:0.82:0.33,0.52,0.15	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.071:0.93,0.069,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.127:0.169,0.535,0.296	0|0:0:1,0,0	0|0:0.375:0.65,0.326,0.024	1|1:2:0,0,1	1|1:1.584:0.031,0.353,0.615	0|0:0:1,0,0	0|0:0.571:0.519,0.39,0.091	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.237:0.777,0.21,0.013	0|0:0.093:0.91,0.087,0.003	0|0:0:1,0,0	1|1:1.39:0.095,0.421,0.485	0|1:0.88:0.311,0.499,0.191	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.923:0.002,0.073,0.925	1|1:2:0,0,1	0|0:0.553:0.508,0.431,0.061	0|0:0.532:0.578,0.312,0.11	0|1:1.114:0.116,0.655,0.23	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.458:0.039,0.463,0.497	0|0:0.697:0.378,0.548,0.075	1|0:0.819:0.325,0.532,0.143	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.388:0.096,0.42,0.484	0|0:0:1,0,0	0|0:0.056:0.945,0.054,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.181:0.833,0.152,0.014	0|0:0.045:0.956,0.043,0.001	0|0:0.362:0.692,0.254,0.054	0|0:0.029:0.971,0.029,0	0|0:0.888:0.319,0.475,0.206	0|0:0.052:0.95,0.048,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.254:0.759,0.229,0.013	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.784:0.261,0.694,0.045	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.946,0.053,0.002
+3	18409331	SNP-3.18408112.	A	G	.	PASS	AR2=0.994;DR2=0.995;AF=0.229	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.174:0.836,0.154,0.01	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.25:0.765,0.219,0.016	0|0:0.061:0.94,0.059,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.197:0.812,0.179,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.956,0.044,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.103:0.899,0.099,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18409522	SNP-3.18408303.	C	A	.	PASS	AR2=0.974;DR2=0.979;AF=0.379	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.061:0.94,0.06,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.129:0.876,0.12,0.004	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.107:0.896,0.101,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.137:0.867,0.13,0.003	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0.125:0.879,0.117,0.004	0|0:0.151:0.852,0.145,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.086:0.916,0.081,0.002	0|0:0.101:0.902,0.096,0.003	0|0:0.088:0.914,0.085,0.002	0|0:0:1,0,0	0|0:0.197:0.815,0.173,0.012	0|0:0.193:0.818,0.17,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.907,0.089,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.139:0.865,0.131,0.004	0|0:0:1,0,0	0|0:0.101:0.903,0.093,0.004	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.859:0.007,0.127,0.866	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.639:0.425,0.511,0.064	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.096:0.908,0.088,0.004	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.093:0.909,0.088,0.003	0|0:0.187:0.822,0.169,0.009	0|0:0.462:0.557,0.424,0.019	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.219:0.795,0.191,0.014	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.185:0.825,0.165,0.01	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.018,0	1|1:2:0,0,1	0|0:0.103:0.9,0.097,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0.115:0.889,0.108,0.004	0|0:0.109:0.895,0.102,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.116:0.888,0.108,0.004	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.122:0.882,0.114,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.085:0.917,0.081,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.085:0.917,0.081,0.002	0|0:0.019:0.981,0.019,0	0|0:0.047:0.954,0.045,0.001	0|0:0.036:0.965,0.034,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.085:0.917,0.081,0.002	0|0:0.011:0.989,0.011,0	0|0:0.034:0.967,0.033,0.001	0|0:0.012:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.216:0.798,0.188,0.014	0|0:0.011:0.989,0.011,0	0|0:0.217:0.789,0.205,0.006	0|0:0.034:0.967,0.032,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.613:0.394,0.598,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.087:0.915,0.083,0.002
+3	18410408	SNP-3.18409189.	C	A	.	PASS	AR2=0.96;DR2=0.965;AF=0.284	GT:DS:GP	0|0:0:1,0,0	1|0:1.594:0.017,0.373,0.611	0|0:0.001:0.999,0.001,0	1|1:1.929:0.002,0.067,0.931	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.914:0.005,0.077,0.918	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.889:0.003,0.105,0.892	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.829:0.009,0.152,0.839	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.6:0.03,0.339,0.63	0|0:0:1,0,0	1|1:1.722:0.018,0.243,0.739	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.253:0.767,0.214,0.019	1|0:0.962:0.255,0.529,0.216	1|0:0.846:0.319,0.517,0.165	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.859:0,0.14,0.86	0|0:0:1,0,0	0|1:0.916:0.232,0.621,0.147	1|1:1.276:0.1,0.523,0.376	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.184:0.043,0.729,0.228	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.27:0.134,0.462,0.404	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.155:0.855,0.134,0.01	1|1:1.879:0.011,0.1,0.89	0|0:0:1,0,0	1|1:1.73:0.014,0.242,0.744	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.757:0.014,0.216,0.771	1|1:2:0,0,1	1|1:1.909:0.005,0.082,0.913	1|1:1.956:0.001,0.041,0.958	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.902:0.005,0.088,0.907	1|1:2:0,0,1	1|1:1.928:0.002,0.068,0.93	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.624:0.028,0.321,0.652	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.957,0.043,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.803:0.009,0.179,0.812	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.135:0.079,0.707,0.214	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.941:0.003,0.052,0.945	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.157:0.104,0.636,0.26	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.955,0.044,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.905:0.001,0.093,0.906	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.034,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.894:0.003,0.099,0.898	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.887:0.005,0.103,0.892	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.966:0,0.033,0.966	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.97:0.001,0.029,0.971	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.252:0.77,0.208,0.022	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18435790	SNP-3.18434571.	C	A	.	PASS	AR2=1;DR2=1;AF=0.354	GT:DS:GP	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:1.971:0,0.028,0.972	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18438070	SNP-3.18436851.	C	A	.	PASS	AR2=0.998;DR2=0.999;AF=0.357	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.962,0.037,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.97,0.03,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.403:0.609,0.378,0.012	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18438144	SNP-3.18436925.	A	G	.	PASS	AR2=1;DR2=1;AF=0.253	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18439247	SNP-3.18438028.	A	G	.	PASS	AR2=0.994;DR2=0.995;AF=0.214	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	0|0:0.047:0.954,0.046,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.324:0.686,0.304,0.01	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.016,0	0|0:0:1,0,0	0|0:0.035:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.181:0.823,0.174,0.004	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.33:0.679,0.313,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18442144	SNP-3.18440925.	C	A	.	PASS	AR2=0.973;DR2=0.984;AF=0.305	GT:DS:GP	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.969,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.945:0.001,0.053,0.946	0|0:0.544:0.525,0.405,0.07	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.637:0.463,0.438,0.099	0|1:1.145:0.085,0.685,0.23	1|0:1:0,1,0	0|0:0.664:0.447,0.442,0.111	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.718:0.036,0.21,0.754	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.454:0.014,0.519,0.467	1|1:1.376:0.13,0.363,0.507	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.416:0.147,0.29,0.563	0|0:0:1,0,0
+3	18442726	SNP-3.18441507.	A	G	.	PASS	AR2=0.994;DR2=0.994;AF=0.323	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.152:0.853,0.142,0.005	0|0:0:1,0,0	0|0:0.166:0.841,0.151,0.008	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.128:0.876,0.121,0.003	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.044:0.957,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.261:0.759,0.221,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.944,0.054,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.95,0.05,0.001	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.931,0.069,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.139:0.864,0.133,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.161:0.845,0.148,0.007	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0
+3	18443068	SNP-3.18441849.	A	G	.	PASS	AR2=0.963;DR2=0.97;AF=0.237	GT:DS:GP	1|1:1.744:0.008,0.239,0.752	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.837:0.005,0.153,0.842	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.489:0.546,0.42,0.034	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0.174:0.838,0.149,0.012	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.151:0.104,0.642,0.255	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.926:0.002,0.069,0.928	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.783:0.014,0.188,0.797	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.558:0.025,0.392,0.583	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.614:0.043,0.3,0.657	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.787:0.014,0.185,0.801	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.952:0.119,0.81,0.071	1|1:1.658:0.022,0.299,0.679	1|1:2:0,0,1	0|1:1.233:0.143,0.482,0.375	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.276:0.725,0.275,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.955:0.12,0.804,0.076	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.101:0.901,0.097,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.067:0.933,0.067,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.281:0.734,0.251,0.015	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.874:0.005,0.117,0.879	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.952,0.048,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.965,0.035,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.977:0,0.023,0.977	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.98:0.268,0.485,0.247	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	1|1:2:0,0,1	1|1:1.966:0,0.034,0.966	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.973:0,0.027,0.973	1|1:1.749:0.013,0.226,0.761	1|1:1.667:0.006,0.32,0.674	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998
+3	18443765	SNP-3.18442546.	A	G	.	PASS	AR2=0.994;DR2=0.996;AF=0.293	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.415:0.097,0.392,0.511	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.127:0.874,0.126,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.029:0.971,0.029,0	1|1:1.887:0.003,0.107,0.89	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.002:0.998,0.002,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.884:0.003,0.111,0.887	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	18444167	SNP-3.18442948.	C	A	.	PASS	AR2=0.998;DR2=0.999;AF=0.335	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.343:0.657,0.343,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18444805	SNP-3.18443586.	C	A	.	PASS	AR2=0.987;DR2=0.99;AF=0.382	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.032:0.969,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:0.537:0.48,0.502,0.017	0|0:0:1,0,0	0|0:0.055:0.945,0.055,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0.167:0.842,0.15,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.949,0.048,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.931,0.067,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.178:0.828,0.166,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.093:0.913,0.082,0.005	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.171:0.841,0.147,0.012	1|1:2:0,0,1	0|0:0.025:0.975,0.024,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.164:0.842,0.153,0.005	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:0.519:0.559,0.364,0.077	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.265:0.758,0.219,0.023	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.799:0.282,0.638,0.081	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.945,0.055,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.962,0.037,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18458739	SNP-3.18457520.	C	A	.	PASS	AR2=0.991;DR2=0.995;AF=0.392	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.085:0.284,0.346,0.37	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.441:0.098,0.363,0.539	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18462480	SNP-3.18461261.	C	A	.	PASS	AR2=1;DR2=1;AF=0.34	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.979:0,0.021,0.979	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.991:0,0.009,0.991	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18463409	SNP-3.18462190.	A	G	.	PASS	AR2=0.99;DR2=0.992;AF=0.394	GT:DS:GP	0|0:0.031:0.969,0.031,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.908:0.001,0.09,0.909	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.504:0.073,0.349,0.577	1|1:1.862:0.006,0.126,0.868	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.985:0.222,0.571,0.207	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.963:0,0.037,0.963	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.041:0.96,0.039,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.672:0.344,0.64,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.921:0.003,0.074,0.923	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.387:0.668,0.277,0.055	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.021:0.979,0.021,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.037:0.964,0.036,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	18463744	SNP-3.18462525.	A	G	.	PASS	AR2=0.987;DR2=0.989;AF=0.272	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.072:0.931,0.065,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0.016:0.984,0.015,0	0|0:0.035:0.966,0.034,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.283:0.015,0.687,0.298	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1.036:0.238,0.488,0.274	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.684:0.399,0.518,0.083	0|0:0:1,0,0	0|0:0.237:0.803,0.157,0.04	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.06:0.941,0.058,0.001	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.045:0.955,0.044,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	1|1:2:0,0,1	0|0:0.343:0.657,0.343,0	0|1:1.16:0.024,0.792,0.184	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18467139	SNP-3.18465920.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.388	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.855:0.007,0.13,0.863	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.993:0,0.006,0.993	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.971:0,0.029,0.971	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.904:0.002,0.092,0.906	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.956:0,0.044,0.956	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.955:0,0.045,0.955	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	18467606	SNP-3.18466387.	C	A	.	PASS	AR2=1;DR2=1;AF=0.339	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18475869	SNP-3.18474650.	A	G	.	PASS	AR2=0.998;DR2=0.999;AF=0.253	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.26:0.751,0.239,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18480186	SNP-3.18478967.	C	A	.	PASS	AR2=0.982;DR2=0.985;AF=0.377	GT:DS:GP	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.252:0.749,0.25,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.18:0.839,0.142,0.019	0|0:0:1,0,0	0|0:0.187:0.823,0.167,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.174:0.838,0.149,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.239:0.776,0.209,0.015	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.09:0.92,0.07,0.01	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.113:0.891,0.105,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.063:0.939,0.059,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.202:0.811,0.177,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.18:0.828,0.163,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.472:0.598,0.332,0.07	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.975:0,0.025,0.975	0|1:1:0,1,0	0|0:0.063:0.94,0.058,0.002	1|1:2:0,0,1	0|0:0.079:0.923,0.074,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.126:0.882,0.109,0.008	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.025:0.975,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.08:0.922,0.076,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.957:0,0.043,0.957	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.207:0.801,0.191,0.008	1|0:1:0,1,0	0|0:0.079:0.924,0.074,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.065:0.937,0.061,0.002	0|0:0:1,0,0	0|0:0.072:0.931,0.067,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.09:0.92,0.071,0.01	0|0:0.301:0.727,0.245,0.028	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.155:0.849,0.147,0.004	0|0:0.076:0.924,0.076,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18481758	SNP-3.18480539.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.348	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0.033:0.967,0.032,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.973:0,0.027,0.973	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18483130	SNP-3.18481911.	A	G	.	PASS	AR2=0.972;DR2=0.979;AF=0.346	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.221:0.791,0.196,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.206:0.806,0.183,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.196:0.813,0.177,0.01	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.962,0.038,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.419:0.627,0.327,0.046	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.423:0.622,0.333,0.045	0|0:0.524:0.533,0.41,0.057	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.383:0.62,0.376,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.96,0.04,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.208:0.8,0.192,0.008	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.02:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.417:0.628,0.326,0.045	1|0:0.625:0.446,0.483,0.071	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.294:0.722,0.262,0.016	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.688:0.415,0.482,0.103	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.232:0.782,0.204,0.014	1|1:2:0,0,1	0|0:0.12:0.882,0.115,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.188:0.821,0.17,0.009	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.951:0.001,0.048,0.951	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.227:0.786,0.2,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.978:0,0.022,0.978	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.856:0.002,0.14,0.858	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0,0.025,0.975	1|1:1.96:0,0.039,0.961	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.949,0.049,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.333:0.695,0.277,0.028	0|0:0.018:0.982,0.018,0	1|1:2:0,0,1	1|1:2:0,0,1
+3	18484788	SNP-3.18483569.	A	G	.	PASS	AR2=0.971;DR2=0.979;AF=0.378	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.36:0.673,0.294,0.033	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.057:0.945,0.053,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.087:0.915,0.084,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.599:0.459,0.483,0.058	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:0.667:0.443,0.448,0.11	0|0:0:1,0,0	0|1:0.601:0.482,0.436,0.083	1|0:0.659:0.438,0.466,0.097	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.243:0.779,0.2,0.022	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.134:0.869,0.128,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.35:0.669,0.311,0.019	0|0:0.335:0.692,0.282,0.027	0|0:0.392:0.647,0.315,0.039	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.036:0.965,0.034,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.04:0.962,0.036,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0.178:0.837,0.147,0.015	0|0:0.157:0.845,0.153,0.002	0|0:0.385:0.652,0.311,0.037	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.077:0.926,0.071,0.003	0|0:0.058:0.943,0.056,0.001	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.988,0.012,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.313:0.745,0.197,0.058	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.37:0.674,0.281,0.045	1|1:2:0,0,1
+3	18490760	SNP-3.18489541.	C	A	.	PASS	AR2=0.992;DR2=0.994;AF=0.206	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.361:0.079,0.481,0.44	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1.274:0.131,0.464,0.405	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.965,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.969,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.052:0.949,0.05,0.001	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18493244	SNP-3.18492025.	C	A	.	PASS	AR2=0.962;DR2=0.973;AF=0.385	GT:DS:GP	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.957,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.916:0.005,0.074,0.921	1|1:2:0,0,1	0|0:0.012:0.988,0.012,0	0|1:0.671:0.329,0.671,0	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	0|0:0.073:0.929,0.07,0.001	0|0:0.016:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.956,0.043,0.001	0|0:0:1,0,0	0|0:0.021:0.98,0.02,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.313:0.701,0.284,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.224:0.781,0.214,0.005	0|0:0.169:0.839,0.154,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.05,0.001	0|0:0.051:0.95,0.05,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.05:0.95,0.049,0.001	0|0:0.165:0.835,0.165,0	0|0:0.163:0.838,0.161,0.001	0|0:0:1,0,0	0|0:0.066:0.937,0.06,0.003	0|0:0.037:0.963,0.036,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.599:0.492,0.416,0.092	1|1:2:0,0,1	0|0:0.143:0.857,0.143,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.155:0.85,0.145,0.005	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0.53:0.521,0.429,0.051	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.207:0.806,0.181,0.013	0|0:0.202:0.801,0.196,0.003	0|0:0:1,0,0	1|0:0.596:0.495,0.415,0.091	0|0:0.151:0.85,0.148,0.002	0|1:1:0,1,0	0|0:0.128:0.879,0.114,0.007	0|0:0.49:0.567,0.375,0.057	0|0:0.089:0.917,0.076,0.006	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.997:0,0.003,0.997	0|0:0.016:0.984,0.015,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.183:0.825,0.167,0.008	1|1:2:0,0,1	0|0:0.068:0.932,0.068,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.425:0.617,0.341,0.042	0|0:0.035:0.965,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.339:0.703,0.254,0.043	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.127:0.875,0.123,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.451:0.621,0.306,0.073	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0.138:0.869,0.123,0.007	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.947,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.599:0.492,0.416,0.092	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18494873	SNP-3.18493654.	A	G	.	PASS	AR2=1;DR2=1;AF=0.253	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18495638	SNP-3.18494419.	C	A	.	PASS	AR2=0.987;DR2=0.989;AF=0.373	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.222:0.789,0.2,0.011	0|0:0.193:0.817,0.173,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.119:0.888,0.105,0.007	0|0:0.277:0.741,0.24,0.019	0|0:0.217:0.795,0.193,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.132:0.871,0.125,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.327:0.704,0.265,0.031	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.99:0,0.009,0.991	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.326:0.701,0.272,0.027	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.07:0.932,0.067,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.289:0.73,0.251,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.022:0.979,0.021,0.001	0|0:0.272:0.746,0.237,0.017	0|0:0:1,0,0	0|0:0.24:0.775,0.21,0.015	0|0:0.051:0.949,0.05,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.943,0.056,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18496206	SNP-3.18494987.	A	G	.	PASS	AR2=0.903;DR2=0.929;AF=0.352	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.546:0.533,0.388,0.079	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.024:0.208,0.561,0.232	0|0:0.546:0.533,0.388,0.079	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.085:0.153,0.61,0.238	1|0:0.623:0.437,0.502,0.06	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.228:0.018,0.737,0.245	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.002:0.039,0.92,0.041	1|1:1.703:0.018,0.261,0.721	0|0:0.596:0.518,0.368,0.114	0|0:0:1,0,0	0|0:0.736:0.368,0.528,0.104	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.483:0.568,0.38,0.052	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.456:0.075,0.393,0.532	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.609:0.042,0.308,0.65	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.577:0.053,0.317,0.63	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.752:0.011,0.227,0.762	1|1:2:0,0,1	1|1:1.6:0.049,0.302,0.649	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.906:0.003,0.089,0.908	0|1:0.81:0.326,0.538,0.136	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.941:0.002,0.055,0.943	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.394:0.101,0.405,0.494	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.455:0.076,0.393,0.531	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.497:0.533,0.437,0.03	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.339:0.698,0.265,0.037	1|1:1.647:0.033,0.287,0.68	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.469:0.591,0.349,0.06	0|0:0.378:0.664,0.294,0.042	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.924:0.315,0.447,0.239	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.643:0.026,0.304,0.669	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.926:0.266,0.543,0.192	0|0:0:1,0,0	1|1:1.932:0.002,0.065,0.934	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.069:0.091,0.749,0.16	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.852:0.003,0.142,0.855	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.987:0.146,0.722,0.132	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.415:0.629,0.326,0.045	0|0:0:1,0,0	0|0:0.478:0.582,0.358,0.06	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.302:0.127,0.443,0.43	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.563:0.044,0.348,0.608	1|1:1.702:0.014,0.269,0.717	1|1:1.772:0.014,0.2,0.786	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.061:0.331,0.277,0.392	1|1:2:0,0,1	1|1:1.768:0.021,0.191,0.788	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.84:0.008,0.144,0.848	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.315:0.126,0.433,0.441	1|1:2:0,0,1	1|1:1.587:0.052,0.31,0.639	1|1:2:0,0,1	1|1:1.637:0.038,0.288,0.675	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.707:0.023,0.246,0.731	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.179:0.202,0.417,0.381	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18496335	SNP-3.18495116.	C	A	.	PASS	AR2=1;DR2=1;AF=0.453	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.966:0.001,0.032,0.967	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.966:0.001,0.033,0.967	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18501666	SNP-3.18500447.	A	G	.	PASS	AR2=0.996;DR2=0.997;AF=0.443	GT:DS:GP	1|1:1.984:0,0.016,0.984	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.92:0.002,0.076,0.922	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.948:0.001,0.051,0.948	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.851:0.014,0.121,0.865	1|1:1.971:0,0.029,0.971	0|0:0:1,0,0	1|1:1.959:0,0.041,0.959	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.981:0,0.018,0.981	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.938:0.003,0.056,0.941	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.211:0.795,0.2,0.005	1|1:1.926:0.001,0.072,0.927	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.876:0.004,0.115,0.881	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.958:0,0.041,0.958	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	18501950	SNP-3.18500731.	C	A	.	PASS	AR2=0.988;DR2=0.99;AF=0.459	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.728:0.034,0.203,0.763	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.962:0,0.038,0.962	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.102:0.899,0.099,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	0|0:0.074:0.928,0.071,0.001	1|1:1.982:0,0.018,0.982	1|1:1.976:0,0.023,0.977	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.027:0.973,0.026,0	1|1:1.593:0.011,0.385,0.604	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.03:0.97,0.029,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.216:0.795,0.194,0.011	1|1:2:0,0,1	0|0:0.115:0.889,0.106,0.004	0|0:0.011:0.989,0.011,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:1.966:0.001,0.033,0.967	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.199:0.811,0.18,0.009	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0.144:0.86,0.135,0.005	0|0:0:1,0,0	0|0:0.05:0.95,0.049,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:1.971:0,0.029,0.971	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.17:0.843,0.143,0.014	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.172:0.839,0.15,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.671:0.099,0.131,0.77	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.976:0,0.024,0.976	0|0:0:1,0,0
+3	18503660	SNP-3.18502441.	C	A	.	PASS	AR2=0.996;DR2=0.996;AF=0.35	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	0|0:0.061:0.941,0.057,0.002	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.131:0.874,0.121,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.974:0,0.026,0.974	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.971:0,0.029,0.971	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.94:0.002,0.056,0.942	1|1:2:0,0,1	1|1:1.934:0,0.066,0.934	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.08:0.922,0.075,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.948:0.001,0.051,0.949	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.824:0.001,0.173,0.825	0|0:0.023:0.977,0.023,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.039:0.961,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18503942	SNP-3.18502723.	C	A	.	PASS	AR2=0.998;DR2=0.999;AF=0.454	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.607:0.012,0.368,0.619	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18513093	SNP-3.18511874.	C	A	.	PASS	AR2=0.989;DR2=0.992;AF=0.34	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.212:0.788,0.211,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.117:0.883,0.117,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.823:0.006,0.166,0.828	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.984:0,0.015,0.984	1|1:2:0,0,1	1|1:1.96:0,0.039,0.96	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.23:0.77,0.23,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.42:0.076,0.428,0.496	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.979:0,0.021,0.979	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.115:0.886,0.114,0	1|0:1.231:0.021,0.728,0.251	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.013:0.987,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.852:0.004,0.14,0.856	0|0:0:1,0,0	0|0:0.024:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.948,0.051,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.829:0.006,0.159,0.835	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18521763	SNP-3.18520544.	C	A	.	PASS	AR2=0.962;DR2=0.971;AF=0.346	GT:DS:GP	0|0:0:1,0,0	1|1:1.623:0.035,0.307,0.658	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.807:0.014,0.166,0.821	1|0:1.452:0.086,0.377,0.538	0|0:0.85:0.434,0.283,0.284	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.585:0.027,0.361,0.612	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.084:0.916,0.083,0.001	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.325:0.679,0.317,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.959,0.041,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.969:0,0.031,0.969	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.008:0.993,0.007,0	1|1:2:0,0,1	1|1:1.935:0.001,0.062,0.936	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.088:0.254,0.403,0.343	1|1:2:0,0,1	1|1:1.896:0.008,0.088,0.904	1|1:2:0,0,1	0|1:1.131:0.105,0.66,0.235	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.851:0.344,0.462,0.195	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.327:0.064,0.545,0.391	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.942:0,0.058,0.942	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.972:0,0.028,0.972	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0.02:0.98,0.02,0	0|1:1.228:0.001,0.771,0.228	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.848:0.009,0.135,0.856	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.497:0.064,0.376,0.56	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.949:0.262,0.526,0.211	0|0:0.05:0.95,0.05,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:1.834:0.022,0.121,0.857	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.997,0.003,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.81:0.013,0.164,0.823	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.142:0.876,0.107,0.018	0|0:0:1,0,0	1|0:0.649:0.447,0.457,0.096	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18524055	SNP-3.18522836.	C	A	.	PASS	AR2=0.913;DR2=0.937;AF=0.416	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.156:0.845,0.154,0.001	0|0:0.149:0.853,0.145,0.002	0|0:0.431:0.62,0.328,0.051	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.82:0.259,0.662,0.079	0|0:0.01:0.99,0.01,0	0|0:0.301:0.7,0.299,0.001	0|0:0.116:0.889,0.107,0.005	1|1:2:0,0,1	0|0:0.217:0.784,0.216,0.001	0|0:0.04:0.961,0.037,0.002	1|1:1.915:0.005,0.076,0.92	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.922,0.077,0.001	0|0:0.958:0.343,0.356,0.301	1|0:0.591:0.483,0.443,0.074	0|0:0:1,0,0	0|0:0.051:0.95,0.05,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.406:0.635,0.324,0.041	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.947,0.052,0.001	0|0:0:1,0,0	0|0:0.149:0.864,0.123,0.013	0|0:0:1,0,0	0|0:0.326:0.71,0.253,0.036	0|0:0.291:0.754,0.201,0.045	0|0:0.067:0.934,0.065,0.001	0|0:0:1,0,0	0|0:0.03:0.97,0.03,0	0|0:0.002:0.998,0.002,0	0|0:0.007:0.993,0.007,0	0|0:0.063:0.938,0.06,0.001	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.769:0.392,0.447,0.161	0|0:0:1,0,0	0|0:0.224:0.794,0.187,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0.02:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0.029:0.971,0.029,0	0|0:0.142:0.865,0.127,0.008	0|0:0.036:0.965,0.034,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.92:0.001,0.079,0.92	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:1.491:0.083,0.343,0.574	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.427:0.109,0.355,0.536	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.455:0.633,0.279,0.088	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.855:0.01,0.125,0.865	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.608:0.504,0.384,0.112	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.24:0.76,0.24,0	0|0:0:1,0,0	1|1:1.376:0.1,0.424,0.476	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.969,0.03,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.062:0.939,0.06,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.281:0.74,0.239,0.021	0|0:0.248:0.77,0.212,0.018	0|0:0:1,0,0	0|0:0.278:0.741,0.24,0.019	0|0:0:1,0,0	0|0:0.223:0.78,0.216,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.392:0.636,0.335,0.029	1|1:1.399:0.093,0.415,0.492	1|1:2:0,0,1	0|0:0.391:0.641,0.326,0.032	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.387:0.651,0.312,0.038	0|0:0.507:0.547,0.399,0.054	0|0:0.321:0.684,0.31,0.006	0|1:0.659:0.41,0.521,0.069	0|0:0.512:0.549,0.39,0.061	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.238:0.773,0.216,0.011	0|0:0.518:0.562,0.359,0.08	0|1:1.229:0.101,0.568,0.331	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.686:0.046,0.222,0.732	1|1:2:0,0,1	1|1:1.45:0.083,0.384,0.533	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.194:0.815,0.175,0.009	0|0:0:1,0,0	0|0:0.089:0.913,0.085,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.221:0.798,0.184,0.019	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.129:0.271,0.329,0.4	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.284:0.734,0.248,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.015:0.985,0.015,0	1|1:1.15:0.19,0.469,0.34	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0
+3	18529021	SNP-3.18527802.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.462	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.9:0.006,0.089,0.905	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.967:0,0.033,0.967	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.432:0.568,0.432,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.949:0.001,0.049,0.95	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.918:0.005,0.071,0.923	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.986:0.015,0.984,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.132:0.873,0.121,0.006	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.005:0.996,0.004,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.083:0.917,0.083,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.956,0.044,0	0|0:0:1,0,0	0|0:0.085:0.917,0.081,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:1.971:0.001,0.027,0.972	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.128:0.882,0.108,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.071:0.929,0.071,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.887:0.006,0.102,0.892	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18530324	SNP-3.18529105.	A	G	.	PASS	AR2=1;DR2=1;AF=0.249	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.98:0,0.019,0.98	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18530788	SNP-3.18529569.	C	A	.	PASS	AR2=0.992;DR2=0.994;AF=0.336	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.696:0.028,0.249,0.724	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.943,0.056,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.037:0.963,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.082:0.92,0.078,0.002	0|0:0.028:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.06:0.94,0.059,0.001	0|0:0:1,0,0	0|0:0.091:0.911,0.086,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.049:0.951,0.049,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.28:0.768,0.185,0.048	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.357:0.025,0.592,0.382	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.938,0.061,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.983:0,0.017,0.983	0|0:0:1,0,0
+3	18531959	SNP-3.18530740.	A	G	.	PASS	AR2=0.999;DR2=1;AF=0.449	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.868:0,0.131,0.869	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18533769	SNP-3.18532550.	A	G	.	PASS	AR2=1;DR2=1;AF=0.251	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18535113	SNP-3.18533894.	C	A	.	PASS	AR2=0.965;DR2=0.976;AF=0.416	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.893:0.004,0.098,0.897	1|1:1.605:0.019,0.357,0.624	1|1:1.692:0.045,0.218,0.737	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.98:0,0.02,0.98	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.413:0.086,0.415,0.499	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.49:0.07,0.371,0.559	0|1:1.496:0.069,0.366,0.565	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.947:0.001,0.052,0.947	1|1:1.847:0.001,0.151,0.848	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.86:0.003,0.134,0.863	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.963:0,0.036,0.964	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.815:0.01,0.166,0.824	0|0:0:1,0,0	1|1:1.867:0.004,0.125,0.871	1|1:1.44:0.105,0.351,0.544	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.676:0.013,0.297,0.689	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.945:0.001,0.053,0.946	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.476:0.073,0.379,0.548	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.838:0.004,0.154,0.842	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.801:0.003,0.192,0.804	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.948:0.001,0.051,0.949	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.938:0.001,0.06,0.939	0|0:0:1,0,0	1|0:1.371:0.093,0.442,0.465	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.961:0,0.038,0.962	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.974:0,0.025,0.975	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.458:0.076,0.391,0.534	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.957:0.001,0.041,0.958	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.957:0,0.042,0.957	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.025:0.976,0.023,0.001	0|0:0:1,0,0	0|1:1.483:0.068,0.38,0.552	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.839:0.006,0.148,0.845	0|0:0:1,0,0
+3	18535365	SNP-3.18534146.	C	A	.	PASS	AR2=1;DR2=1;AF=0.344	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18542604	SNP-3.18541385.	C	A	.	PASS	AR2=0.974;DR2=0.982;AF=0.305	GT:DS:GP	0|0:0.001:0.999,0.001,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.608:0.043,0.307,0.65	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.604:0.058,0.279,0.662	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.438:0.042,0.478,0.48	1|0:1:0,1,0	1|0:0.937:0.131,0.801,0.068	0|1:1.59:0.017,0.376,0.607	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.923:0.002,0.073,0.925	0|0:0:1,0,0	1|1:1.632:0.035,0.298,0.667	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.86:0.008,0.123,0.868	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.579:0.042,0.337,0.621	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.258:0.176,0.39,0.434	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.656:0.03,0.285,0.685	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.903:0.004,0.09,0.907	1|1:2:0,0,1	1|1:1.822:0.009,0.16,0.831	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.851:0.009,0.13,0.86	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18543348	SNP-3.18542129.	C	A	.	PASS	AR2=0.993;DR2=0.995;AF=0.332	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.548:0.035,0.382,0.583	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1.5:0.075,0.35,0.575	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.158:0.843,0.157,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.903:0.001,0.096,0.904	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.908:0.004,0.085,0.912	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.955:0.001,0.044,0.955	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.923:0.003,0.07,0.927	0|0:0:1,0,0
+3	18544639	SNP-3.18543420.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.371	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.186:0.829,0.156,0.015	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.171:0.836,0.157,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.439:0.561,0.439,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.962,0.038,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18545523	SNP-3.18544304.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.362	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.06:0.94,0.059,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.953,0.047,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18548077	SNP-3.18546858.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.356	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.101:0.902,0.095,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.087:0.914,0.084,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.981,0.019,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18548882	SNP-3.18547663.	C	A	.	PASS	AR2=0.969;DR2=0.976;AF=0.41	GT:DS:GP	0|0:0.096:0.906,0.092,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.307:0.694,0.305,0.001	0|0:0.101:0.904,0.091,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.216:0.784,0.215,0	0|0:0.51:0.535,0.421,0.044	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.213:0.797,0.193,0.01	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.034:0.966,0.034,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.019,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.925,0.074,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.398:0.621,0.36,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.11:0.893,0.104,0.003	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:0.474:0.529,0.468,0.003	0|0:0:1,0,0	0|0:0.176:0.831,0.163,0.006	0|0:0.14:0.866,0.129,0.006	0|0:0.327:0.69,0.293,0.017	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.229:0.787,0.196,0.017	1|1:2:0,0,1	0|0:0.152:0.858,0.132,0.01	1|1:2:0,0,1	0|0:0.289:0.732,0.247,0.021	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.155:0.848,0.149,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.308:0.742,0.207,0.051	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.23:0.783,0.205,0.012	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.063:0.938,0.061,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.295:0.727,0.251,0.022	0|1:1:0,1,0	0|0:0.896:0.317,0.471,0.212	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.299:0.723,0.254,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.188:0.821,0.17,0.009	0|0:0:1,0,0	0|0:0.09:0.912,0.085,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.267:0.751,0.231,0.018	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18549767	SNP-3.18548548.	C	A	.	PASS	AR2=0.953;DR2=0.966;AF=0.446	GT:DS:GP	0|0:0.323:0.703,0.271,0.026	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.093:0.908,0.091,0.001	0|0:0:1,0,0	0|0:0.535:0.513,0.44,0.047	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.193:0.815,0.176,0.009	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.265:0.736,0.264,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.359:0.673,0.295,0.032	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.238:0.782,0.197,0.02	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.362:0.675,0.288,0.037	0|1:0.424:0.609,0.358,0.033	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.98:0.022,0.977,0.001	0|0:0:1,0,0	0|0:0.329:0.693,0.285,0.022	0|0:0.312:0.718,0.253,0.03	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.549:0.531,0.39,0.08	0|0:0.355:0.677,0.29,0.032	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.449:0.602,0.346,0.052	0|1:0.564:0.498,0.44,0.062	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.97:0.001,0.029,0.97	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.983:0,0.017,0.983	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.661:0.445,0.449,0.106	0|0:0.345:0.687,0.282,0.031	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.417:0.628,0.327,0.045	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.016,0.983	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.44:0.61,0.341,0.05	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.424:0.622,0.332,0.046	0|0:0.434:0.616,0.334,0.05	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.059:0.941,0.058,0.001	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.993:0,0.006,0.993	0|0:0.451:0.599,0.351,0.05	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.28:0.741,0.238,0.021	0|0:0:1,0,0	0|0:0.038:0.962,0.038,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.34:0.688,0.284,0.028	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.952,0.047,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.239:0.781,0.198,0.021	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18550008	SNP-3.18548789.	A	G	.	PASS	AR2=0.955;DR2=0.967;AF=0.463	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.083:0.92,0.077,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.681:0.026,0.267,0.707	1|0:1:0,1,0	1|1:1.824:0.009,0.158,0.833	0|0:0.01:0.99,0.01,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.215:0.119,0.548,0.334	0|1:0.988:0.014,0.984,0.002	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.14:0.866,0.129,0.005	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.371:0.633,0.364,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.93:0.003,0.064,0.933	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.601:0.035,0.328,0.637	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.116:0.161,0.563,0.277	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.545:0.055,0.345,0.6	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.054:0.947,0.053,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0.039:0.962,0.037,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.655:0.027,0.292,0.682	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.045:0.313,0.33,0.357	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0.217:0.827,0.129,0.044	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.671:0.028,0.273,0.699	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.034:0.968,0.031,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.776:0.02,0.185,0.795	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.509:0.053,0.385,0.562	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.58:0.039,0.343,0.618	0|0:0.214:0.786,0.213,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.592:0.04,0.328,0.632	1|1:1.719:0.02,0.242,0.739	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.122:0.882,0.114,0.004	0|0:0:1,0,0	1|1:1.688:0.025,0.262,0.713	1|1:2:0,0,1	1|1:1.958:0,0.042,0.958	0|0:0.086:0.916,0.081,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.697:0.02,0.263,0.717	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.729:0.019,0.233,0.748	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	1|1:1.922:0.004,0.07,0.926	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.888:0.005,0.102,0.893	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.934:0.003,0.061,0.936	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.677:0.027,0.27,0.703	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.974:0,0.026,0.974	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.937:0,0.062,0.938	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.937:0.005,0.053,0.942	0|0:0:1,0,0	1|1:1.925:0.003,0.069,0.928
+3	18550225	SNP-3.18549006.	C	A	.	PASS	AR2=0.978;DR2=0.983;AF=0.303	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.556:0.066,0.311,0.622	0|0:0:1,0,0	0|0:0.277:0.749,0.225,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.968:0.038,0.955,0.006	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.59:0.026,0.359,0.615	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.952:0.111,0.826,0.063	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.623:0.053,0.271,0.676	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.831:0.004,0.16,0.835	1|0:0.83:0.321,0.529,0.15	1|1:1.936:0.001,0.061,0.937	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.943:0.001,0.055,0.944	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.57:0.017,0.395,0.587	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.827:0.011,0.15,0.839	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.775:0.005,0.214,0.78	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.932:0.001,0.066,0.933	1|1:1.97:0,0.03,0.97	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.918:0.004,0.075,0.922	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.914:0.001,0.084,0.915	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.436:0.082,0.401,0.517	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0,0.024,0.976	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18552549	SNP-3.18551330.	C	A	.	PASS	AR2=0.944;DR2=0.956;AF=0.318	GT:DS:GP	0|0:0:1,0,0	1|0:0.724:0.349,0.578,0.073	0|0:0.059:0.942,0.056,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.607:0.038,0.317,0.645	0|1:0.627:0.429,0.515,0.056	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.948,0.052,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.057:0.944,0.054,0.001	1|1:1.637:0.036,0.291,0.673	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.026,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.225:0.793,0.189,0.018	0|0:0.06:0.941,0.058,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.064:0.938,0.061,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.084:0.918,0.08,0.002	0|0:0.332:0.682,0.304,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.181:0.825,0.169,0.006	1|1:1.843:0.01,0.137,0.853	1|1:2:0,0,1	1|1:1.814:0.016,0.153,0.83	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.494:0.089,0.329,0.583	1|1:1.502:0.062,0.374,0.564	1|0:1.482:0.045,0.429,0.527	1|1:1.622:0.03,0.319,0.651	1|1:1.361:0.105,0.429,0.466	1|1:1.697:0.018,0.267,0.715	1|1:1.595:0.038,0.328,0.634	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.833:0,0.167,0.833	1|1:1.611:0.042,0.304,0.654	0|0:0:1,0,0	1|1:1.662:0.028,0.283,0.689	0|0:0:1,0,0	1|1:1.817:0.008,0.167,0.825	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.156:0.852,0.14,0.008	0|0:0:1,0,0	1|1:1.079:0.206,0.508,0.286	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.699:0.027,0.247,0.726	1|1:1.748:0.018,0.217,0.765	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.889:0.001,0.109,0.89	0|1:1.265:0.08,0.575,0.345	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.885:0.002,0.112,0.886	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.805:0.014,0.167,0.819	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.759:0.016,0.209,0.775	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.272:0.146,0.437,0.418	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.97,0.029,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.984:0,0.015,0.984	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0.079:0.923,0.076,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.804:0.014,0.169,0.818	0|0:0:1,0,0	1|1:1.858:0.005,0.131,0.863	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.94,0.059,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.821:0.011,0.157,0.832	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0.001,0.029,0.969	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	18555016	SNP-3.18553797.	C	A	.	PASS	AR2=0.99;DR2=0.991;AF=0.325	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.913:0.003,0.081,0.916	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.023:0.002,0.973,0.025	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.911:0.003,0.082,0.914	1|1:1.776:0.016,0.192,0.792	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.852:0.006,0.137,0.857	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.935:0.003,0.06,0.937	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.867:0.005,0.124,0.871	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.847:0.006,0.141,0.853	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.62:0.024,0.332,0.644	1|1:2:0,0,1	1|1:1.978:0.001,0.021,0.978	1|1:1.851:0.006,0.137,0.857	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.981:0,0.018,0.981	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.917:0.001,0.082,0.917	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.904:0.003,0.09,0.907	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:1.934:0.003,0.061,0.936	1|1:1.904:0.003,0.09,0.907	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.854:0.006,0.135,0.86	0|0:0:1,0,0
+3	18555796	SNP-3.18554577.	C	A	.	PASS	AR2=0.992;DR2=0.994;AF=0.332	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.971:0,0.028,0.972	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.89:0.001,0.108,0.891	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.874:0.003,0.119,0.878	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.945:0.001,0.054,0.945	0|0:0:1,0,0	1|1:1.957:0.001,0.041,0.958	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.726:0.018,0.238,0.744	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.961:0,0.038,0.961	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.919:0.001,0.079,0.92	1|1:2:0,0,1	1|1:1.983:0,0.016,0.983	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.962:0,0.037,0.962	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.989:0,0.011,0.989	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.952:0.001,0.046,0.953	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.338:0.118,0.426,0.456	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18556230	SNP-3.18555011.	C	A	.	PASS	AR2=0.99;DR2=0.992;AF=0.348	GT:DS:GP	0|0:0:1,0,0	1|1:1.968:0,0.031,0.969	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.961:0.001,0.038,0.961	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.964,0.035,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.714:0.029,0.228,0.743	0|0:0:1,0,0	1|1:1.9:0.005,0.089,0.906	0|1:1.297:0.114,0.474,0.411	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.952:0.001,0.045,0.954	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:1.965:0.001,0.034,0.965	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.644:0.051,0.255,0.694	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.684:0.356,0.605,0.039	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.086:0.916,0.083,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:1.98:0,0.02,0.98	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.004,0.995	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:1.964:0.001,0.035,0.964	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.951:0.001,0.047,0.952	0|0:0:1,0,0
+3	18558573	SNP-3.18557354.	C	A	.	PASS	AR2=0.997;DR2=0.998;AF=0.468	GT:DS:GP	0|0:0.01:0.99,0.009,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	1|1:1.948:0,0.052,0.948	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.304:0.723,0.249,0.028	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.021:0.028,0.924,0.049	0|0:0.034:0.966,0.034,0	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.902:0.001,0.095,0.904	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18558627	SNP-3.18557408.	A	G	.	PASS	AR2=0.984;DR2=0.987;AF=0.213	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.281:0.754,0.211,0.035	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.935,0.062,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.137:0.868,0.127,0.005	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.517:0.071,0.341,0.588	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.121:0.883,0.113,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.107:0.896,0.1,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.205:0.809,0.178,0.014	0|0:0.121:0.883,0.113,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.151:0.854,0.14,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.827:0.013,0.147,0.84	1|1:2:0,0,1	1|1:1.917:0.002,0.079,0.919	0|0:0:1,0,0	1|1:1.948:0.002,0.048,0.95	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.095:0.913,0.078,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18559120	SNP-3.18557901.	C	A	.	PASS	AR2=0.99;DR2=0.992;AF=0.327	GT:DS:GP	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.77:0.01,0.21,0.78	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.735:0.007,0.252,0.742	1|1:1.761:0.003,0.232,0.764	1|1:2:0,0,1	1|1:1.677:0.008,0.308,0.685	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.716:0.005,0.275,0.721	1|1:2:0,0,1	1|1:1.903:0.002,0.092,0.906	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.889:0.014,0.083,0.903	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.895:0.014,0.078,0.909	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.83:0.012,0.146,0.842	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.937:0,0.062,0.937	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.858:0.001,0.14,0.859	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	18559268	SNP-3.18558049.	C	A	.	PASS	AR2=0.922;DR2=0.948;AF=0.237	GT:DS:GP	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.047:0.954,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.961,0.039,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.466:0.072,0.391,0.537	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1.348:0.106,0.439,0.454	0|0:0:1,0,0	1|1:1.462:0.073,0.392,0.535	0|0:0:1,0,0	1|0:1.368:0.1,0.432,0.468	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.35:0.106,0.438,0.456	0|1:1.351:0.106,0.438,0.456	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.503:0.067,0.363,0.57	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:1.011:0.195,0.599,0.206	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.477:0.069,0.385,0.546	1|0:1.447:0.077,0.399,0.524	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.595:0.053,0.299,0.648	1|1:2:0,0,1	1|0:1.367:0.1,0.433,0.467	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.071:0.213,0.503,0.284	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.957,0.042,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.421:0.086,0.408,0.507	1|1:2:0,0,1	1|1:1.515:0.063,0.359,0.578	1|0:1:0,1,0	1|1:1.485:0.066,0.382,0.552	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.371:0.099,0.431,0.47	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	18561310	SNP-3.18560091.	C	A	.	PASS	AR2=0.997;DR2=0.997;AF=0.363	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.111:0.892,0.104,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.096:0.906,0.091,0.002	0|0:0.096:0.906,0.092,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.054:0.947,0.053,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.077:0.925,0.073,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.084:0.917,0.082,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.939,0.06,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18561974	SNP-3.18560755.	C	A	.	PASS	AR2=0.984;DR2=0.986;AF=0.367	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.17:0.837,0.156,0.007	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.146:0.859,0.135,0.005	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.138:0.867,0.129,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.027:0.973,0.027,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.174:0.834,0.159,0.008	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.158:0.848,0.146,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.074:0.927,0.071,0.001	0|0:0:1,0,0	0|0:0.076:0.926,0.072,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.095:0.907,0.09,0.002	0|0:0.108:0.895,0.102,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.959,0.04,0.001	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.174:0.834,0.159,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.922,0.076,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.067:0.934,0.065,0.001	0|0:0.066:0.935,0.064,0.001	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.039:0.961,0.039,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.912:0,0.088,0.912	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.765:0,0.234,0.765	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.752:0,0.248,0.752	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.095:0.908,0.09,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.101:0.901,0.097,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.608:0.035,0.322,0.643	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.083:0.919,0.078,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.174:0.834,0.159,0.008	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.158:0.848,0.145,0.006	0|0:0:1,0,0	0|0:0.08:0.922,0.076,0.002	0|0:0.091:0.911,0.087,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0.092:0.91,0.087,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18564453	SNP-3.18563234.	C	A	.	PASS	AR2=0.969;DR2=0.973;AF=0.398	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.217:0.794,0.194,0.012	1|1:2:0,0,1	0|0:0.208:0.802,0.187,0.011	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.246:0.769,0.216,0.015	0|0:0.211:0.8,0.189,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.209:0.802,0.187,0.011	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.209:0.802,0.187,0.011	0|0:0.256:0.763,0.218,0.019	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.08:0.922,0.076,0.002	0|0:0.065:0.937,0.062,0.002	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.084:0.918,0.08,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.209:0.803,0.185,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.948,0.051,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.159:0.846,0.149,0.005	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.196:0.813,0.178,0.009	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.22:0.793,0.193,0.013	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.075:0.926,0.072,0.002	0|0:0:1,0,0	0|0:0.263:0.755,0.228,0.017	0|0:0.103:0.899,0.098,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.229:0.784,0.203,0.013	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.094:0.908,0.09,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.207:0.804,0.185,0.011	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.229:0.784,0.203,0.013	0|0:0.14:0.862,0.136,0.002	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.038:0.963,0.037,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.209:0.802,0.187,0.011	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.224:0.788,0.199,0.013	0|0:0.209:0.802,0.187,0.011	0|0:0.206:0.805,0.184,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.216:0.796,0.192,0.012	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.21:0.801,0.188,0.011	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.212:0.799,0.189,0.011	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.065:0.936,0.064,0.001	0|0:0.067:0.934,0.065,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.209:0.802,0.187,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.209:0.802,0.187,0.011	0|0:0.198:0.812,0.177,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.114:0.891,0.104,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.242:0.773,0.212,0.015	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18564499	SNP-3.18563280.	C	A	.	PASS	AR2=0.99;DR2=0.992;AF=0.323	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.826:0.007,0.16,0.833	0|1:1:0,1,0	1|1:1.718:0.018,0.247,0.735	0|1:1:0,1,0	1|1:1.657:0.029,0.286,0.685	1|1:1.764:0.015,0.206,0.779	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.759:0.014,0.214,0.772	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.76:0.015,0.209,0.776	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.758:0.013,0.215,0.772	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.855:0.008,0.13,0.862	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18568709	SNP-3.18567490.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.346	GT:DS:GP	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.935:0.001,0.063,0.936	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.017:0.983,0.017,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.99:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.89:0.003,0.104,0.893	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.97,0.03,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.967:0,0.032,0.967	0|0:0.002:0.998,0.002,0	0|0:0.054:0.946,0.054,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.938:0.001,0.06,0.939	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.039:0.962,0.036,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18574317	SNP-3.18573098.	C	A	.	PASS	AR2=1;DR2=1;AF=0.366	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.961,0.038,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18574632	SNP-3.18573413.	C	A	.	PASS	AR2=0.976;DR2=0.984;AF=0.306	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.829:0.009,0.152,0.838	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.382:0.102,0.414,0.484	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.723:0.017,0.243,0.74	1|1:2:0,0,1	1|1:1.738:0.014,0.235,0.752	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1.393:0.065,0.476,0.458	1|1:1.659:0.031,0.278,0.69	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.691:0.021,0.267,0.712	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.691:0.019,0.271,0.71	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.365:0.705,0.225,0.07	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.933:0.003,0.061,0.936	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.737:0.022,0.218,0.759	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.373:0.125,0.377,0.498	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18574749	SNP-3.18573530.	A	G	.	PASS	AR2=0.903;DR2=0.911;AF=0.421	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.034:0.234,0.498,0.268	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.741:0.001,0.258,0.741	0|1:0.953:0.273,0.502,0.226	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.028:0.234,0.503,0.263	0|1:1.002:0.251,0.495,0.254	1|1:1.813:0.009,0.168,0.822	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.935:0.282,0.502,0.217	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.934:0.285,0.497,0.218	0|0:0:1,0,0	0|0:0.984:0.258,0.5,0.242	1|0:1.006:0.249,0.495,0.256	1|1:2:0,0,1	1|1:1.031:0.236,0.498,0.266	0|1:1.031:0.236,0.498,0.266	0|0:0:1,0,0	1|0:1.05:0.226,0.498,0.276	0|0:0:1,0,0	0|0:1.007:0.249,0.495,0.256	0|0:0:1,0,0	1|1:1.052:0.225,0.498,0.277	0|0:0:1,0,0	1|1:1.868:0.005,0.122,0.873	1|1:1.606:0.065,0.264,0.671	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.637:0.03,0.302,0.668	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.794:0.008,0.19,0.802	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.85:0.006,0.138,0.856	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.915:0.294,0.496,0.21	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.837:0.004,0.155,0.841	1|1:1.805:0.013,0.169,0.818	0|0:0.434:0.617,0.333,0.051	0|0:0:1,0,0	1|0:0.971:0.106,0.816,0.078	1|1:1.814:0.009,0.167,0.823	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0.047:0.954,0.045,0.001	0|0:0:1,0,0	0|0:0.093:0.911,0.086,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.169:0.831,0.169,0	0|0:0:1,0,0	0|0:0.04:0.961,0.039,0.001	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.039:0.962,0.038,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0.065:0.937,0.062,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.973:0.265,0.497,0.238	0|0:0:1,0,0	1|1:1.684:0.025,0.267,0.708	0|0:0:1,0,0	1|1:1.887:0.003,0.106,0.891	1|1:2:0,0,1	0|1:0.973:0.265,0.497,0.238	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|1:1.085:0.175,0.564,0.261	1|1:1.79:0.008,0.194,0.798	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.909:0.29,0.511,0.199	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.973:0.265,0.497,0.238	0|1:1.272:0.061,0.605,0.333	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.109:0.891,0.109,0	0|0:0:1,0,0	1|0:1.028:0.236,0.499,0.264	0|0:0:1,0,0	1|1:1.052:0.225,0.498,0.277	1|0:1.028:0.236,0.499,0.264	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.982:0.261,0.496,0.243	1|0:1.028:0.237,0.499,0.264	1|1:2:0,0,1	0|1:1.052:0.225,0.498,0.277	1|1:2:0,0,1	0|0:0.014:0.986,0.014,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.731:0.016,0.238,0.746	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.032:0.234,0.499,0.267	0|0:0:1,0,0	0|1:0.926:0.307,0.461,0.233	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.013:0.987,0.013,0	1|0:0.857:0.329,0.486,0.186	0|0:0.786:0.461,0.292,0.247	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.963,0.036,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.03:0.236,0.498,0.266	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:1.751:0.05,0.15,0.8	1|1:2:0,0,1	1|1:1.981:0,0.018,0.981	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.758:0.049,0.145,0.807	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:1.052:0.225,0.498,0.277	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18575195	SNP-3.18573976.	A	G	.	PASS	AR2=0.996;DR2=0.996;AF=0.235	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.893:0.107,0.893,0	1|0:1.056:0.1,0.745,0.156	1|1:2:0,0,1	1|1:1.852:0.005,0.138,0.857	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.94:0.002,0.057,0.942	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.895:0.004,0.098,0.899	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18578550	SNP-3.18577331.	A	G	.	PASS	AR2=0.928;DR2=0.942;AF=0.392	GT:DS:GP	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.519:0.058,0.364,0.578	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.313:0.123,0.441,0.436	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1.206:0.158,0.478,0.364	1|1:1.17:0.172,0.485,0.343	1|0:1.17:0.172,0.485,0.343	0|1:1.148:0.183,0.486,0.331	1|0:1.264:0.142,0.453,0.406	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.944:0.002,0.052,0.946	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1.437:0.075,0.413,0.512	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.56:0.046,0.347,0.606	0|1:1.571:0.049,0.331,0.62	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.58:0.048,0.325,0.627	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.392:0.118,0.372,0.51	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.199:0.16,0.48,0.36	0|0:0:1,0,0	1|1:1.934:0.002,0.062,0.936	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.582:0.019,0.38,0.601	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|1:0.968:0.285,0.462,0.253	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.46:0.542,0.456,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.456:0.075,0.394,0.531	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1.196:0.162,0.481,0.357	0|0:0:1,0,0	0|1:1.148:0.183,0.486,0.331	1|0:1.126:0.19,0.494,0.316	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1.168:0.175,0.483,0.343	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.492:0.065,0.377,0.558	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.148:0.183,0.486,0.331	0|1:1.172:0.172,0.485,0.344	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.196:0.162,0.481,0.358	1|0:1.148:0.183,0.486,0.331	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.615:0.037,0.311,0.652	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	18578564	SNP-3.18577345.	A	G	.	PASS	AR2=0.847;DR2=0.878;AF=0.242	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.527:0.547,0.379,0.074	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.733:0.402,0.464,0.134	1|1:2:0,0,1	0|1:0.902:0.305,0.487,0.208	0|0:0:1,0,0	1|0:1.043:0.229,0.498,0.272	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.424:0.625,0.327,0.048	1|1:2:0,0,1	1|0:0.963:0.265,0.506,0.228	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.046:0.228,0.498,0.274	1|0:1.023:0.239,0.5,0.262	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:1.052:0.225,0.498,0.277	0|1:0.855:0.326,0.492,0.182	1|1:2:0,0,1	0|0:0.694:0.422,0.462,0.116	1|0:0.434:0.619,0.327,0.053	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.71:0.416,0.458,0.126	0|0:0:1,0,0	0|1:0.721:0.409,0.461,0.13	1|1:2:0,0,1	1|0:0.76:0.385,0.47,0.145	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.76:0.385,0.47,0.145	1|1:2:0,0,1	0|0:0.596:0.501,0.402,0.097	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.247:0.754,0.245,0.001	0|0:0:1,0,0	0|0:0.637:0.475,0.414,0.111	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.798:0.363,0.476,0.161	0|0:0.37:0.659,0.312,0.029	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.291:0.728,0.253,0.019	0|0:0:1,0,0	0|0:0.493:0.55,0.408,0.043	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.15:0.858,0.134,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.647:0.452,0.449,0.099	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.781:0.372,0.474,0.153	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.779:0.346,0.529,0.125	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.202:0.806,0.186,0.008	0|0:0.063:0.937,0.062,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.763:0.383,0.471,0.146	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.961,0.039,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.762:0.384,0.471,0.146	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.633:0.466,0.435,0.099	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.05:0.226,0.498,0.276	0|0:0.328:0.686,0.3,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.214:0.798,0.19,0.012	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.384:0.636,0.343,0.02	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.725:0.407,0.461,0.132	0|0:0.296:0.717,0.271,0.013	0|0:0.478:0.581,0.36,0.059	0|0:0.116:0.887,0.11,0.003	1|1:0.718:0.411,0.46,0.129	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.693:0.426,0.456,0.119	0|0:0:1,0,0	0|0:0.173:0.837,0.154,0.01	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.699:0.423,0.454,0.122	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.937,0.061,0.001	0|0:0:1,0,0	0|0:0.093:0.909,0.088,0.003	1|1:1.05:0.226,0.498,0.276	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.635:0.471,0.423,0.106	0|0:0:1,0,0	0|1:0.76:0.385,0.47,0.145	0|0:0.182:0.834,0.149,0.017	1|0:1.05:0.226,0.498,0.276	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.527:0.548,0.376,0.075	0|0:0.492:0.572,0.364,0.064	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.172:0.836,0.155,0.008	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.291:0.741,0.227,0.032	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.164:0.848,0.139,0.013
+3	18578743	SNP-3.18577524.	A	G	.	PASS	AR2=0.993;DR2=0.994;AF=0.511	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.954:0.001,0.045,0.954	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.966:0.001,0.033,0.966	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.802:0.006,0.187,0.808	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.959:0.001,0.039,0.96	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.946:0.001,0.052,0.947	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.962:0.001,0.037,0.962	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.958,0.042,0.001	0|0:0:1,0,0	0|0:0.046:0.955,0.044,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.802:0.01,0.178,0.812	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.745:0.02,0.215,0.765	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.842:0.006,0.147,0.847	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.842:0.007,0.144,0.849	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.841:0.006,0.146,0.848	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.972:0.001,0.026,0.973	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	18580725	SNP-3.18579506.	C	A	.	PASS	AR2=0.988;DR2=0.991;AF=0.404	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.958,0.042,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:0.497:0.533,0.436,0.03	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.136:0.871,0.122,0.007	0|0:0:1,0,0	0|0:0.349:0.68,0.29,0.029	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.066:0.935,0.064,0.001	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.134:0.871,0.123,0.006	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.078:0.924,0.073,0.002	0|0:0.16:0.847,0.147,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.083:0.918,0.081,0.001	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.181:0.828,0.162,0.009	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.123:0.883,0.111,0.006	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.09:0.913,0.084,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.222:0.79,0.197,0.013	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.034:0.966,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.938,0.061,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.139:0.867,0.126,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18615582	SNP-3.18614363.	A	G	.	PASS	AR2=0.985;DR2=0.987;AF=0.24	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0.043:0.958,0.042,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.079:0.076,0.77,0.155	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.194:0.806,0.194,0	1|1:2:0,0,1	1|1:1.856:0.006,0.133,0.862	1|1:1.876:0.004,0.117,0.879	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.833:0.009,0.15,0.841	1|1:1.96:0,0.039,0.96	1|1:1.652:0.015,0.319,0.666	0|0:0:1,0,0	1|1:1.916:0.002,0.08,0.918	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.067:0.934,0.065,0.001	1|1:2:0,0,1	0|0:0.064:0.937,0.062,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.893:0.003,0.101,0.896	0|0:0.097:0.905,0.092,0.002	0|0:0:1,0,0	1|1:1.898:0.002,0.098,0.9	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.964:0.001,0.035,0.965	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.062:0.112,0.714,0.174	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.809:0.01,0.171,0.819	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.886:0.003,0.108,0.889	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.055:0.946,0.053,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.973:0.001,0.026,0.974	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18617626	SNP-3.18616407.	C	A	.	PASS	AR2=0.959;DR2=0.968;AF=0.393	GT:DS:GP	0|0:0.122:0.882,0.114,0.004	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.062:0.94,0.059,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.069:0.932,0.066,0.002	0|0:0:1,0,0	1|1:1.875:0.004,0.117,0.879	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.083:0.919,0.079,0.002	0|0:0:1,0,0	0|0:0.065:0.937,0.062,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.294:0.717,0.272,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.151:0.853,0.143,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.254:0.777,0.192,0.031	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.265:0.741,0.252,0.007	0|0:0.465:0.563,0.409,0.028	0|0:0.321:0.69,0.299,0.011	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.488:0.555,0.403,0.042	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.086:0.916,0.081,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.431:0.6,0.369,0.031	0|0:0.015:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.43:0.57,0.43,0	0|0:0.546:0.532,0.391,0.078	0|0:0.388:0.619,0.374,0.007	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.956:0.001,0.041,0.958	1|1:2:0,0,1	1|1:1.825:0.006,0.163,0.831	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.953:0.001,0.046,0.954	1|1:2:0,0,1	1|1:1.922:0.002,0.074,0.924	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.957:0.001,0.041,0.958	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.772:0.006,0.217,0.778	1|1:2:0,0,1	1|1:1.879:0.003,0.116,0.881	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.115:0.888,0.108,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.298:0.727,0.247,0.026	1|1:1.93:0.002,0.067,0.931	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.922:0.001,0.075,0.924	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.922:0.001,0.076,0.923	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.963:0.001,0.036,0.963	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.915:0.002,0.08,0.918	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	0|0:0.136:0.868,0.128,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.326:0.688,0.298,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.098:0.904,0.094,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.977:0,0.023,0.977	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.938,0.06,0.001	0|0:0.44:0.575,0.41,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.094:0.909,0.089,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.932,0.067,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.928:0.004,0.064,0.932	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.199:0.809,0.184,0.008	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.971:0,0.028,0.971	0|0:0:1,0,0	1|1:1.981:0,0.018,0.981	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.144:0.88,0.096,0.024	1|1:2:0,0,1	0|0:0.394:0.606,0.393,0.001	0|0:0.232:0.787,0.193,0.02	0|0:0:1,0,0	0|0:0.176:0.843,0.138,0.019	0|0:0.185:0.826,0.162,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.777:0.002,0.218,0.779	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.963:0,0.036,0.963	0|0:0:1,0,0
+3	18617856	SNP-3.18616637.	C	A	.	PASS	AR2=0.972;DR2=0.977;AF=0.327	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.747:0.016,0.221,0.763	0|0:0:1,0,0	0|0:0.042:0.958,0.041,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.066:0.936,0.063,0.001	0|0:0:1,0,0	1|1:1.709:0.021,0.249,0.73	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.905,0.093,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.97,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.087:0.914,0.085,0.001	0|0:0.091:0.91,0.09,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.95:0.001,0.048,0.951	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.896:0.004,0.096,0.9	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.558:0.011,0.42,0.569	1|1:1.683:0.024,0.269,0.707	1|1:2:0,0,1	1|1:1.731:0.019,0.232,0.749	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.771:0.014,0.202,0.784	1|1:1.774:0.013,0.2,0.787	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.758:0.014,0.214,0.772	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.721:0.02,0.24,0.74	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.727:0.018,0.237,0.745	1|1:1.96:0.001,0.039,0.96	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.893:0.006,0.095,0.899	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.072:0.929,0.069,0.001	0|0:0:1,0,0	0|0:0.089:0.913,0.085,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.744:0.016,0.223,0.761	0|0:0.071:0.93,0.068,0.002	0|0:0:1,0,0	1|1:1.814:0.013,0.16,0.827	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.081:0.921,0.077,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.777:0.017,0.189,0.794	1|1:2:0,0,1	1|1:1.771:0.015,0.198,0.787	1|1:1.779:0.015,0.19,0.794	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.943:0.001,0.055,0.944	1|1:1.953:0.001,0.045,0.954	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.645:0.065,0.225,0.71	1|1:1.949:0.001,0.049,0.95	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.847:0.013,0.127,0.86	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18618966	SNP-3.18617747.	C	A	.	PASS	AR2=0.975;DR2=0.982;AF=0.305	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.535:0.055,0.355,0.59	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.706:0.027,0.241,0.733	0|0:0:1,0,0	1|1:1.757:0.013,0.218,0.77	1|1:1.587:0.043,0.326,0.63	1|1:2:0,0,1	0|1:1.501:0.039,0.42,0.541	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.449:0.042,0.468,0.49	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.951:0,0.049,0.951	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.703:0.027,0.243,0.73	1|1:1.842:0.01,0.138,0.852	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.602:0.038,0.322,0.64	1|1:1.945:0.002,0.052,0.946	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.796:0.012,0.181,0.807	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.936:0,0.064,0.936	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.679:0.058,0.206,0.736	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.682:0.048,0.222,0.73	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18618983	SNP-3.18617764.	A	G	.	PASS	AR2=0.989;DR2=0.991;AF=0.206	GT:DS:GP	1|1:1.747:0.017,0.219,0.764	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.023,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.864:0.005,0.126,0.869	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.854:0.007,0.133,0.861	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.04:0.96,0.039,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:0.687:0.423,0.466,0.11	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.85:0.163,0.825,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.016,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.809:0.011,0.169,0.82	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18620936	SNP-3.18619717.	A	G	.	PASS	AR2=0.927;DR2=0.946;AF=0.221	GT:DS:GP	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	1|1:1.448:0.044,0.465,0.492	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.775:0.013,0.199,0.788	0|0:0.431:0.621,0.328,0.052	0|0:0:1,0,0	0|0:0.149:0.857,0.138,0.006	1|1:1.202:0.172,0.454,0.374	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.767:0.014,0.205,0.781	0|0:0.052:0.949,0.051,0	0|0:0.178:0.829,0.165,0.007	0|1:1.296:0.065,0.575,0.36	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.638:0.479,0.405,0.116	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.48:0.048,0.425,0.527	1|1:2:0,0,1	0|1:1.521:0.043,0.393,0.564	1|1:1.673:0.026,0.276,0.699	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.954,0.045,0	0|0:0.144:0.857,0.143,0	0|0:0:1,0,0	0|0:0.044:0.956,0.043,0	0|0:0.259:0.751,0.24,0.009	0|0:0.07:0.931,0.069,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.982,0.018,0	0|0:0:1,0,0	0|0:0.135:0.87,0.125,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.333:0.705,0.258,0.037	0|0:0:1,0,0	1|0:0.508:0.499,0.495,0.006	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.67:0.036,0.259,0.706	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.358:0.674,0.294,0.032	0|0:0:1,0,0	0|0:0.159:0.848,0.145,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.144:0.858,0.139,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.448:0.607,0.339,0.054	0|0:0:1,0,0	0|0:0.315:0.706,0.272,0.022	0|0:0:1,0,0	0|1:0.513:0.512,0.464,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.962,0.037,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.741:0.017,0.225,0.758	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.947,0.053,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.026:0.974,0.026,0	1|1:1.766:0.014,0.206,0.78	1|1:2:0,0,1	0|0:0.048:0.953,0.046,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.765:0.014,0.207,0.779	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.088:0.913,0.085,0.001	0|0:0:1,0,0	0|0:0.087:0.915,0.083,0.002	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.098:0.903,0.096,0.001	1|1:1.655:0.029,0.288,0.683	1|1:2:0,0,1	1|1:1.768:0.014,0.204,0.782	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0.14:0.87,0.121,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.763:0.014,0.209,0.777	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.767:0.014,0.205,0.781	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.768:0.016,0.201,0.783	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0
+3	18621127	SNP-3.18619908.	A	G	.	PASS	AR2=0.93;DR2=0.946;AF=0.222	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.407:0.642,0.309,0.049	0|0:0.011:0.989,0.011,0	0|0:0.126:0.878,0.118,0.004	0|1:0.701:0.398,0.504,0.098	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.167:0.839,0.155,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.272:0.747,0.234,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.253:0.763,0.221,0.016	0|0:0.249:0.765,0.22,0.015	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.432:0.593,0.382,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.126:0.879,0.117,0.005	0|0:0.016:0.984,0.016,0	0|0:0.367:0.65,0.332,0.018	1|1:2:0,0,1	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.114:0.212,0.462,0.326	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.068:0.933,0.065,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.494:0.571,0.364,0.065	0|0:0:1,0,0	0|0:0.052:0.948,0.052,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.334:0.695,0.276,0.029	0|0:0:1,0,0	0|0:0.134:0.871,0.125,0.005	0|0:0.027:0.973,0.027,0	0|0:0.007:0.993,0.007,0	1|1:1.564:0.056,0.324,0.62	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.614:0.035,0.316,0.649	0|0:0.014:0.986,0.014,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.176:0.832,0.16,0.008	0|0:0.009:0.991,0.009,0	0|0:0.447:0.612,0.33,0.059	0|0:0.022:0.978,0.022,0	0|0:0.294:0.725,0.256,0.019	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0.004:0.996,0.004,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.918:0,0.081,0.918	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.266:0.752,0.231,0.018	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.02:0.98,0.02,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.1:0.9,0.1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.316:0.708,0.269,0.024	0|0:0:1,0,0	0|0:0.566:0.509,0.417,0.075	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.254:0.764,0.219,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.692:0.425,0.457,0.117	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.232:0.771,0.226,0.003	0|0:0.112:0.892,0.104,0.004	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0.008:0.992,0.008,0	0|0:0.049:0.952,0.047,0.001	0|0:0.01:0.99,0.01,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.217:0.795,0.193,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.047:0.953,0.047,0	0|0:0.786:0.381,0.452,0.167	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.808:0.368,0.457,0.175	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.213:0.799,0.189,0.012	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.843:0.008,0.142,0.85	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	18622401	SNP-3.18621182.	C	A	.	PASS	AR2=0.988;DR2=0.99;AF=0.38	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.891:0.004,0.101,0.895	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.104:0.898,0.1,0.002	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.135:0.868,0.129,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.189:0.819,0.172,0.009	0|0:0.046:0.955,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.905,0.093,0.002	0|0:0:1,0,0	0|0:0.373:0.659,0.31,0.032	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.874:0.008,0.111,0.881	1|1:2:0,0,1	1|1:1.654:0.035,0.276,0.689	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.972:0,0.028,0.972	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.087:0.916,0.082,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.835:0.004,0.157,0.839	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.942,0.058,0	0|0:0.319:0.694,0.293,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.909:0.001,0.09,0.909	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.963:0,0.037,0.963	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.035,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.977:0,0.023,0.977	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.046:0.955,0.045,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18623735	SNP-3.18622516.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.534	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.422:0,0.578,0.422	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.057:0.944,0.055,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.082:0,0.918,0.082	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	18625404	SNP-3.18624185.	A	G	.	PASS	AR2=0.981;DR2=0.987;AF=0.217	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.74:0.017,0.227,0.756	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.15:0.253,0.345,0.402	1|1:2:0,0,1	1|1:1.795:0.01,0.184,0.806	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.715:0.017,0.252,0.732	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.693:0.033,0.241,0.726	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.612:0.038,0.312,0.65	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.78:0.012,0.196,0.792	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18625780	SNP-3.18624561.	A	G	.	PASS	AR2=0.982;DR2=0.985;AF=0.475	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.759:0.014,0.212,0.774	0|0:0:1,0,0	1|1:1.776:0.014,0.195,0.79	1|1:1.825:0.01,0.155,0.835	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.041:0.959,0.04,0.001	1|1:1.856:0.005,0.134,0.861	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.825:0.008,0.159,0.833	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.793:0.011,0.185,0.804	0|1:1:0,1,0	1|1:1.783:0.012,0.193,0.795	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.857:0.006,0.132,0.863	1|1:1.789:0.011,0.188,0.801	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.771:0.012,0.205,0.783	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.841:0.159,0.841,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.788:0.007,0.197,0.795	1|1:1.789:0.01,0.192,0.799	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.739:0.018,0.225,0.757	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.841:0.008,0.144,0.849	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.779:0.012,0.196,0.791	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.822:0.009,0.16,0.831	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.796:0.011,0.183,0.806	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.848:0.011,0.129,0.86	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	18625896	SNP-3.18624677.	C	A	.	PASS	AR2=1;DR2=1;AF=0.364	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:1.997:0,0.003,0.997	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18626554	SNP-3.18625335.	C	A	.	PASS	AR2=0.995;DR2=0.996;AF=0.467	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.017:0.983,0.017,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0.069:0.932,0.066,0.002	0|0:0.001:0.999,0.001,0	1|0:0.591:0.41,0.589,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	0|0:0.015:0.985,0.015,0	1|0:1:0,1,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:1.91:0.004,0.081,0.915	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.96,0.039,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.019:0.981,0.019,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0.049:0.952,0.047,0.001	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.983:0,0.017,0.983	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.219:0,0.781,0.219	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.095:0.914,0.076,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.93:0.075,0.919,0.005	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.02:0.98,0.02,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18627874	SNP-3.18626655.	C	A	.	PASS	AR2=0.993;DR2=0.995;AF=0.357	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	0|0:0.001:0.999,0.001,0	0|0:0.426:0.581,0.413,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.279:0.724,0.272,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0.006:0.994,0.006,0	0|0:0.085:0.918,0.078,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.074:0.933,0.06,0.007	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.566:0.434,0.566,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.044:0.956,0.044,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18628603	SNP-3.18627384.	C	A	.	PASS	AR2=0.986;DR2=0.989;AF=0.46	GT:DS:GP	0|0:0:1,0,0	1|1:1.926:0.001,0.073,0.926	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1.465:0.1,0.335,0.565	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.062:0.938,0.062,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.739:0.018,0.225,0.757	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.908:0.002,0.088,0.91	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.721:0.02,0.239,0.741	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.855:0.006,0.134,0.86	0|0:0:1,0,0	1|1:1.882:0.002,0.114,0.884	1|1:1.771:0.014,0.201,0.785	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.069:0.932,0.067,0.001	1|0:1:0,1,0	1|1:1.649:0.025,0.301,0.674	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.024:0.977,0.023,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.325:0.684,0.306,0.009	0|0:0.055:0.945,0.054,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.101:0.9,0.099,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18629060	SNP-3.18627841.	C	A	.	PASS	AR2=0.976;DR2=0.983;AF=0.33	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.842:0.007,0.144,0.849	1|1:1.851:0.006,0.138,0.856	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.857:0.004,0.134,0.862	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.843:0.011,0.135,0.854	1|1:2:0,0,1	1|0:1.487:0.077,0.36,0.563	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.434:0.064,0.439,0.497	1|1:1.953:0.001,0.046,0.954	1|1:1.895:0.003,0.099,0.898	1|1:1.689:0.017,0.277,0.706	1|1:2:0,0,1	1|0:1.455:0.079,0.387,0.534	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.478:0.008,0.506,0.486	1|1:2:0,0,1	1|1:1.818:0.007,0.168,0.825	0|0:0:1,0,0	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0	1|1:1.981:0,0.018,0.982	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.954:0,0.046,0.954	0|0:0:1,0,0	1|1:1.899:0.001,0.099,0.9	1|1:2:0,0,1	1|1:1.928:0.001,0.07,0.929	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.983:0,0.016,0.983	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.916:0,0.083,0.917	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.984:0,0.015,0.985	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0,0.032,0.968	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.5:0.053,0.394,0.553	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.283:0.74,0.236,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.98:0,0.019,0.98	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.946:0,0.054,0.946	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.957:0.001,0.042,0.958	0|0:0:1,0,0
+3	18632563	SNP-3.18631344.	C	A	.	PASS	AR2=0.987;DR2=0.99;AF=0.341	GT:DS:GP	0|0:0.01:0.99,0.01,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.453:0.105,0.338,0.557	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.246:0.762,0.23,0.008	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.952:0,0.047,0.952	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0.016:0.984,0.015,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.562:0.048,0.342,0.61	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.961:0,0.039,0.961	1|1:1.837:0.007,0.149,0.844	1|1:1.741:0.008,0.242,0.749	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.936:0,0.063,0.937	1|1:2:0,0,1	1|1:1.959:0,0.04,0.959	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.974:0,0.026,0.974	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.647:0.377,0.6,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.733:0.012,0.243,0.745	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18634358	SNP-3.18633139.	A	G	.	PASS	AR2=0.975;DR2=0.979;AF=0.237	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.065:0.936,0.063,0.001	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0.06:0.941,0.058,0.001	0|0:0:1,0,0	0|0:0.079:0.923,0.076,0.002	0|0:0:1,0,0	0|1:1.063:0.001,0.936,0.064	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0.041:0.959,0.041,0	1|1:2:0,0,1	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.037:0.964,0.035,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|1:1.446:0,0.554,0.446	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0.09:0.911,0.089,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.944,0.055,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|1:0.934:0.114,0.839,0.048	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.018:0.073,0.835,0.092	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.246:0.77,0.214,0.016	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.991:0.069,0.872,0.06	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.089:0.913,0.085,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.074:0.927,0.071,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.937,0.062,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.955,0.044,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.955,0.044,0.001	0|0:0:1,0,0	1|0:1.074:0.068,0.79,0.142	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.244:0.772,0.212,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.958,0.042,0	0|0:0:1,0,0	1|0:0.912:0.157,0.774,0.069	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.435:0.004,0.557,0.439	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.224:0.777,0.222,0.001	0|0:0.254:0.747,0.252,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.964:0.185,0.666,0.149	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.078:0.922,0.078,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.086:0.919,0.076,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.095:0.908,0.09,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18640611	SNP-3.18639392.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.473	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.02:0.98,0.02,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.978,0.022,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.982:0,0.018,0.982	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.109:0.892,0.107,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18645295	SNP-3.18644076.	A	G	.	PASS	AR2=0.982;DR2=0.987;AF=0.21	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.932,0.065,0.002	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.661:0.038,0.262,0.699	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.161:0.847,0.146,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.293:0.736,0.234,0.029	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.929,0.07,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.159:0.848,0.145,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	0|0:0.027:0.973,0.027,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.433:0.098,0.371,0.531	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.707:0.006,0.282,0.712	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.195:0.806,0.193,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.049:0.953,0.046,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18648463	SNP-3.18647244.	A	G	.	PASS	AR2=0.943;DR2=0.958;AF=0.562	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.966:0,0.033,0.967	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.8:0.007,0.187,0.806	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.825:0.003,0.17,0.827	0|0:0:1,0,0	1|1:1.979:0,0.02,0.98	1|1:1.821:0.008,0.163,0.829	0|0:0:1,0,0	1|1:1.54:0.041,0.377,0.581	1|1:2:0,0,1	1|1:1.527:0.038,0.397,0.565	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.62:0.011,0.359,0.63	1|1:2:0,0,1	1|1:1.747:0.013,0.227,0.76	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.798:0.008,0.187,0.805	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.664:0.028,0.281,0.691	1|1:1.745:0.006,0.243,0.751	0|0:0:1,0,0	1|1:1.636:0.001,0.363,0.636	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.703:0.024,0.249,0.727	0|0:0:1,0,0	1|1:1.848:0.004,0.145,0.851	1|1:1.724:0.009,0.258,0.733	1|1:2:0,0,1	1|1:1.654:0.033,0.279,0.688	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.941:0.001,0.058,0.941	1|1:1.389:0.104,0.403,0.493	1|1:1.739:0.019,0.223,0.758	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.927:0,0.072,0.928	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.925:0.001,0.073,0.926	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.979:0,0.02,0.979	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.248:0.16,0.431,0.409	1|1:1.87:0.002,0.126,0.872	1|1:1.722:0.005,0.267,0.728	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.961:0,0.039,0.961	0|0:0:1,0,0	1|1:1.552:0.046,0.357,0.597	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.638:0.037,0.288,0.675	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.763:0.017,0.203,0.78	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.478:0.032,0.459,0.51	1|1:1.687:0.023,0.267,0.71	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.389:0.093,0.426,0.482	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.851:0.009,0.13,0.861	1|1:1.967:0,0.032,0.968	1|1:1.616:0.042,0.3,0.658	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.728:0.029,0.215,0.757	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.934:0.001,0.064,0.935	0|1:1.219:0.12,0.541,0.339	1|1:1.827:0.008,0.157,0.835	1|1:2:0,0,1	0|1:1.539:0.056,0.348,0.595	1|1:1.847:0.006,0.14,0.853	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.735:0.02,0.225,0.755	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.511:0.045,0.4,0.555	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.937:0.001,0.06,0.938	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.348:0.126,0.4,0.474	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	18649030	SNP-3.18647811.	C	A	.	PASS	AR2=0.997;DR2=0.997;AF=0.454	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:1.971:0,0.029,0.971	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.828:0.009,0.154,0.837	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.901:0.007,0.085,0.908	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.966:0,0.034,0.966	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.956:0.001,0.043,0.957	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.975:0,0.025,0.975	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.915:0.003,0.079,0.918	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.856:0.004,0.136,0.86	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18655483	SNP-3.18654264.	C	A	.	PASS	AR2=0.938;DR2=0.955;AF=0.439	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.998:0.256,0.489,0.254	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.265:0.753,0.229,0.018	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.969:0.266,0.5,0.234	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:1.937:0.001,0.061,0.938	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.794:0.347,0.512,0.141	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.532:0.539,0.389,0.071	1|1:2:0,0,1	0|0:0.951:0.28,0.489,0.231	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.462:0.061,0.416,0.523	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.483:0.126,0.265,0.609	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.509:0.552,0.387,0.061	1|1:1.91:0.002,0.086,0.912	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.01:0.99,0.01,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.491:0.59,0.329,0.081	1|1:2:0,0,1	0|0:0.015:0.985,0.015,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.957:0.001,0.042,0.958	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.832:0.005,0.158,0.837	1|1:2:0,0,1	0|0:0.515:0.544,0.396,0.059	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.553:0.502,0.443,0.055	0|0:0.378:0.669,0.283,0.048	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.481:0.578,0.364,0.059	0|0:0.603:0.488,0.42,0.092	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1.001:0.255,0.49,0.255	0|0:0:1,0,0	0|0:0.265:0.759,0.217,0.024	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.915:0,0.085,0.915	1|1:2:0,0,1	0|0:0.468:0.589,0.355,0.056	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.264:0.754,0.229,0.018	0|0:0.754:0.358,0.53,0.112	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.514:0.545,0.396,0.059	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.911:0.302,0.485,0.213	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.173:0.837,0.153,0.01	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.375:0.661,0.303,0.036	0|0:0:1,0,0	0|0:0.53:0.541,0.388,0.071	0|0:0.588:0.49,0.432,0.078	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.966:0.001,0.032,0.967	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.309:0.716,0.26,0.024	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18655739	SNP-3.18654520.	A	G	.	PASS	AR2=0.864;DR2=0.892;AF=0.308	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.822:0.347,0.484,0.169	1|1:1.765:0.004,0.226,0.77	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.365:0.677,0.282,0.042	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.349:0.116,0.419,0.465	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.541:0.53,0.4,0.07	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.78:0.373,0.475,0.152	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.422:0.614,0.35,0.036	0|1:0.939:0.279,0.502,0.218	0|1:0.749:0.396,0.458,0.145	0|1:1.423:0.018,0.54,0.441	0|0:0:1,0,0	0|1:1.102:0.065,0.768,0.167	0|0:0:1,0,0	1|0:0.814:0.344,0.499,0.158	0|1:1.267:0.113,0.508,0.38	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.092:0.193,0.521,0.286	0|0:0.574:0.526,0.374,0.1	1|1:1.64:0.043,0.274,0.683	1|1:0.878:0.316,0.49,0.194	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.774:0.015,0.195,0.789	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.364:0.061,0.513,0.426	0|0:0:1,0,0	1|1:1.967:0.001,0.031,0.968	1|1:1.742:0.003,0.253,0.745	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.157:0.174,0.495,0.331	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.91:0.002,0.086,0.912	1|1:1.657:0.056,0.231,0.713	1|1:2:0,0,1	0|0:0.761:0.398,0.444,0.158	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.282:0.116,0.485,0.398	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.477:0.03,0.462,0.507	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.062:0.191,0.555,0.254	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.08:0.21,0.499,0.291	0|0:0:1,0,0	1|1:1.577:0.04,0.343,0.617	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.525:0.532,0.41,0.058	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.124:0.137,0.601,0.261	0|0:0.526:0.546,0.382,0.072	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:1.39:0.078,0.455,0.467	0|0:0:1,0,0	1|1:1.91:0.005,0.079,0.915	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.059:0.221,0.498,0.281	0|0:0.725:0.407,0.46,0.132	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.945:0.247,0.56,0.192	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.723:0.411,0.455,0.134	1|1:2:0,0,1	0|1:1.321:0.125,0.428,0.447	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.467:0.597,0.339,0.064	0|0:0.805:0.356,0.484,0.161	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.117:0.18,0.523,0.297	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.163:0.178,0.481,0.341	1|1:1.41:0.072,0.447,0.482	0|1:0.75:0.402,0.447,0.152	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.428:0.616,0.34,0.044	0|0:0.588:0.499,0.414,0.087	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.994:0.254,0.499,0.247	1|1:2:0,0,1	0|0:0.782:0.371,0.476,0.153	0|0:0.737:0.4,0.464,0.136	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.915:0.005,0.076,0.919	1|1:2:0,0,1	1|1:1.573:0.088,0.251,0.661	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.038:0.227,0.508,0.265	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.128:0.168,0.535,0.297	0|0:0:1,0,0	1|1:1.953:0.001,0.044,0.955
+3	18658396	SNP-3.18657177.	A	G	.	PASS	AR2=0.924;DR2=0.941;AF=0.456	GT:DS:GP	1|1:1.872:0.006,0.116,0.878	0|0:0:1,0,0	0|1:0.926:0.3,0.473,0.226	0|0:0:1,0,0	1|1:1.735:0.018,0.229,0.753	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.76:0.018,0.204,0.778	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.597:0.023,0.356,0.62	0|0:0:1,0,0	1|1:1.964:0,0.035,0.965	1|1:1.845:0.006,0.143,0.851	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.685:0.02,0.275,0.705	1|1:1.147:0.163,0.527,0.31	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1.247:0.138,0.477,0.385	1|1:2:0,0,1	1|1:1.642:0.033,0.292,0.675	1|0:1.513:0.065,0.357,0.578	1|0:1.002:0.256,0.486,0.258	1|1:1.527:0.056,0.361,0.583	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.618:0.033,0.316,0.651	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.404:0.091,0.415,0.495	1|1:1.806:0.01,0.175,0.815	0|0:0:1,0,0	1|1:1.554:0.051,0.345,0.604	1|1:1.848:0.004,0.145,0.851	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.505:0.064,0.367,0.569	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.964:0,0.035,0.964	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.893:0.287,0.533,0.18	1|1:1.424:0.089,0.398,0.513	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.934:0,0.066,0.934	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.372:0.099,0.43,0.471	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.743:0.02,0.217,0.763	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.633:0.038,0.292,0.67	0|0:0:1,0,0	1|1:1.809:0.006,0.18,0.814	1|1:1.273:0.125,0.477,0.398	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.88:0.002,0.116,0.882	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.753:0.016,0.216,0.768	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.75:0.016,0.218,0.766	0|1:1.579:0.026,0.369,0.605	1|1:2:0,0,1	0|1:1:0,1,0	0|1:0.937:0.302,0.458,0.24	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.588:0.011,0.391,0.599	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.651:0.031,0.286,0.683	1|1:2:0,0,1	1|1:1.572:0.046,0.336,0.618	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.226:0.151,0.473,0.376	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.592:0.044,0.321,0.636	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.592:0.044,0.321,0.636	1|1:1.649:0.032,0.287,0.681	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.972:0,0.028,0.972	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.433:0.087,0.393,0.52	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.718:0.021,0.24,0.739	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.896:0.013,0.077,0.91	1|1:1.421:0.089,0.401,0.51	0|0:0:1,0,0	1|1:2:0,0,1
+3	18659416	SNP-3.18658197.	A	G	.	PASS	AR2=0.993;DR2=0.994;AF=0.202	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.95,0.049,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.144:0.864,0.129,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.175:0.838,0.148,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0.045:0.956,0.044,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.031:0.97,0.029,0.001	0|0:0.358:0.654,0.335,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.177:0.827,0.17,0.004	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.962,0.037,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18662162	SNP-3.18660943.	C	A	.	PASS	AR2=0.995;DR2=0.996;AF=0.373	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.182:0.826,0.165,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.211:0.8,0.189,0.011	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.206:0.808,0.178,0.014	0|0:0.157:0.849,0.145,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.166:0.841,0.152,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18662402	SNP-3.18661183.	A	G	.	PASS	AR2=0.996;DR2=0.996;AF=0.523	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.953:0,0.047,0.953	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.947:0,0.052,0.947	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.972:0,0.027,0.972	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.942:0.001,0.056,0.943	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.956:0,0.043,0.956	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.898:0.005,0.092,0.903	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.949:0.001,0.049,0.95	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.864:0.003,0.129,0.868	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.949:0.001,0.05,0.95	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.934:0.001,0.063,0.936	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.942:0.002,0.055,0.944	1|1:1.995:0,0.005,0.995	1|1:1.996:0,0.004,0.996	1|1:1.985:0,0.014,0.985	0|0:0:1,0,0	1|1:1.878:0.003,0.116,0.881	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	1|1:1.951:0.001,0.047,0.952	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.919:0.002,0.076,0.922	0|0:0:1,0,0	1|1:1.955:0.001,0.044,0.956
+3	18664428	SNP-3.18663209.	A	G	.	PASS	AR2=0.938;DR2=0.952;AF=0.464	GT:DS:GP	1|1:1.799:0.014,0.174,0.813	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.121:0.194,0.49,0.315	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.261:0.058,0.622,0.319	1|1:1.634:0.033,0.3,0.667	1|1:1.607:0.042,0.309,0.649	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.401:0.062,0.475,0.463	1|1:1.826:0.007,0.16,0.833	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.84:0.007,0.146,0.847	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.881:0.005,0.108,0.887	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.565:0.046,0.343,0.611	1|1:1.321:0.12,0.439,0.441	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.391:0.013,0.582,0.404	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.705:0.016,0.263,0.721	1|1:1.899:0.001,0.1,0.899	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.603:0.029,0.34,0.632	1|1:2:0,0,1	1|1:1.849:0.006,0.139,0.855	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.846:0.006,0.142,0.852	1|1:1.882:0.004,0.11,0.886	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.915:0.001,0.083,0.916	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.656:0.039,0.266,0.695	1|1:1.923:0.001,0.074,0.924	1|1:1.914:0.001,0.083,0.916	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.214:0.795,0.196,0.009	0|0:0:1,0,0	1|1:1.878:0.002,0.117,0.881	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.528:0.5,0.473,0.028	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.105:0.897,0.1,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.092:0.91,0.089,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.565:0.046,0.343,0.611	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.264:0.745,0.247,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.851:0.007,0.135,0.858	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.856:0.004,0.135,0.86	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.766:0.011,0.212,0.777	0|0:0:1,0,0	1|1:1.897:0.004,0.096,0.901	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.825:0.01,0.156,0.835	1|1:2:0,0,1	1|1:1.34:0.1,0.46,0.44	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.122:0.194,0.49,0.316	0|0:0:1,0,0	1|1:1.798:0.012,0.179,0.81	1|1:1.934:0.001,0.064,0.935	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.888:0.001,0.11,0.889	1|1:2:0,0,1	0|0:0.066:0.935,0.065,0.001	1|1:1.825:0.009,0.157,0.834	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.423:0.08,0.417,0.503	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.492:0.041,0.425,0.533	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.104:0.897,0.103,0	1|1:2:0,0,1	1|1:1.571:0.039,0.35,0.611	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.85:0.007,0.136,0.857	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.835:0.013,0.139,0.848	1|1:2:0,0,1	1|0:1.491:0.066,0.377,0.557	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.916:0.008,0.068,0.924	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0.001,0.031,0.969	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.909:0,0.09,0.91	0|1:1.109:0.198,0.495,0.307	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.224:0.152,0.472,0.376	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.961:0.001,0.038,0.962
+3	18667112	SNP-3.18665893.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.462	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.954:0,0.045,0.954	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.746:0,0.254,0.746	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.901:0.002,0.095,0.903	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.827:0.013,0.146,0.841	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18667892	SNP-3.18666673.	A	G	.	PASS	AR2=1;DR2=1;AF=0.245	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18668534	SNP-3.18667315.	C	A	.	PASS	AR2=0.998;DR2=0.999;AF=0.358	GT:DS:GP	0|0:0.045:0.956,0.044,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.909:0,0.09,0.91	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.931,0.068,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.062:0.939,0.06,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.036:0.965,0.035,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18672293	SNP-3.18671074.	C	A	.	PASS	AR2=0.992;DR2=0.993;AF=0.389	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.084:0.919,0.079,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.952,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.132:0.868,0.132,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.154:0.852,0.142,0.006	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.143:0.864,0.129,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.028:0.972,0.028,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.032:0.969,0.031,0	0|0:0.154:0.857,0.133,0.01	0|0:0.094:0.909,0.088,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.217:0.794,0.195,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.05:0.951,0.048,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.938,0.061,0.001	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.04:0.96,0.039,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.145:0.859,0.136,0.005	0|0:0.047:0.953,0.046,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.118:0.886,0.11,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.11:0.893,0.103,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.1:0.902,0.096,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0
+3	18672970	SNP-3.18671751.	C	A	.	PASS	AR2=1;DR2=1;AF=0.36	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18673545	SNP-3.18672326.	A	G	.	PASS	AR2=0.992;DR2=0.993;AF=0.213	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.92:0.002,0.077,0.921	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.962,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.923:0.001,0.074,0.925	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.156:0.851,0.143,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.92:0.002,0.077,0.921	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.129:0.875,0.12,0.005	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.945:0.001,0.053,0.946	1|1:2:0,0,1	0|0:0.17:0.839,0.153,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.293:0.727,0.254,0.019	0|0:0.022:0.979,0.021,0.001	0|0:0:1,0,0	0|0:0.035:0.966,0.033,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18675080	SNP-3.18673861.	C	A	.	PASS	AR2=0.993;DR2=0.993;AF=0.338	GT:DS:GP	0|0:0:1,0,0	1|1:1.954:0.001,0.045,0.954	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.921:0.001,0.076,0.923	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.902:0.002,0.094,0.904	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:1.946:0,0.054,0.946	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.972:0,0.027,0.973	1|1:1.913:0.001,0.085,0.914	1|1:1.957:0.001,0.042,0.957	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.927:0.002,0.07,0.928	1|1:1.98:0,0.019,0.98	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.975:0,0.024,0.976	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.974:0,0.026,0.974	1|1:1.931:0.001,0.067,0.932	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.919:0.001,0.079,0.92	1|1:1.964:0,0.035,0.965	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:1.984:0,0.015,0.985	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.941:0.001,0.057,0.942	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.799:0.317,0.568,0.115	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.905:0.002,0.091,0.907	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.98:0,0.019,0.98	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.976:0,0.024,0.976	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.896:0.003,0.099,0.898	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.955:0,0.045,0.955	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18675738	SNP-3.18674519.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.364	GT:DS:GP	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.067:0.934,0.066,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.049:0.952,0.047,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.933,0.066,0.001	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.991:0,0.009,0.991	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18681590	SNP-3.18680349.	A	G	.	PASS	AR2=0.993;DR2=0.994;AF=0.222	GT:DS:GP	0|0:0.032:0.968,0.031,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.054:0.947,0.052,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.057:0.943,0.057,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.946,0.053,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.081:0.92,0.079,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.059:0.941,0.059,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.142:0.868,0.121,0.011	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.957,0.042,0.001	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.932,0.068,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.081:0.921,0.077,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.947,0.052,0.001	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.054:0.947,0.051,0.001	0|0:0:1,0,0	0|0:0.26:0.762,0.216,0.022	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	18683390	SNP-3.18682149.	C	A	.	PASS	AR2=0.988;DR2=0.99;AF=0.421	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.186:0.823,0.168,0.009	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.186:0.823,0.168,0.009	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0.224:0.789,0.199,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.121:0.004,0.871,0.125	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.21:0.802,0.187,0.011	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.306:0.725,0.244,0.031	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.186:0.823,0.168,0.009	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.187:0.822,0.169,0.009	0|0:0.186:0.823,0.169,0.009	1|0:1:0,1,0	0|0:0.186:0.823,0.168,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.323:0.705,0.268,0.027	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0.058:0.944,0.054,0.002	1|1:2:0,0,1	0|0:0:1,0,0
+3	18683411	SNP-3.18682170.	C	A	.	PASS	AR2=1;DR2=1;AF=0.352	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18687173	SNP-3.18685932.	C	A	.	PASS	AR2=0.994;DR2=0.994;AF=0.346	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.882:0.002,0.114,0.884	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.882:0.005,0.108,0.887	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.9:0.122,0.855,0.022	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.941,0.058,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.925:0.102,0.871,0.027	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.688:0.006,0.3,0.694	1|1:2:0,0,1	1|1:1.945:0.001,0.054,0.946	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.887:0.003,0.106,0.891	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.94:0.001,0.059,0.94	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.892:0.002,0.105,0.894	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.832:0.007,0.154,0.839	0|0:0:1,0,0
+3	18687536	SNP-3.18686295.	A	G	.	PASS	AR2=0.984;DR2=0.988;AF=0.303	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.165:0.842,0.152,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.167:0.84,0.153,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.405:0.601,0.394,0.005	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.254:0.765,0.217,0.018	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.171:0.838,0.154,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.576:0.493,0.438,0.069	0|0:0.377:0.644,0.335,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.203:0.809,0.18,0.012	0|0:0.169:0.838,0.155,0.007	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.349:0.684,0.282,0.033	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1
+3	18688918	SNP-3.18687677.	C	A	.	PASS	AR2=0.971;DR2=0.976;AF=0.374	GT:DS:GP	0|0:0.293:0.729,0.25,0.022	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.301:0.719,0.261,0.02	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.931,0.068,0.001	0|0:0:1,0,0	0|0:0.082:0.919,0.08,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.929,0.07,0.002	0|0:0.093:0.91,0.087,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.449:0.604,0.344,0.052	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.163:0.841,0.156,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.148:0.105,0.642,0.253	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.388:0.662,0.287,0.05	1|1:2:0,0,1	1|1:1.771:0.014,0.201,0.785	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.663:0.415,0.507,0.078	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.046:0.957,0.041,0.002	1|1:1.737:0.006,0.251,0.743	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.728:0.003,0.266,0.731	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.081:0.922,0.076,0.002	1|0:1.094:0.039,0.828,0.133	1|1:2:0,0,1	0|0:0.024:0.976,0.024,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.045:0.956,0.044,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.074:0.928,0.071,0.002	0|0:0:1,0,0	1|1:1.791:0.007,0.194,0.798	0|0:0:1,0,0	0|0:0.059:0.942,0.056,0.001	0|0:0.107:0.897,0.1,0.003	0|0:0:1,0,0	0|0:0.111:0.894,0.1,0.006	0|0:0.091:0.911,0.086,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.237:0.778,0.206,0.016	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.781:0.246,0.727,0.027	0|0:0.075:0.927,0.071,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.168:0.84,0.152,0.008	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.088:0.914,0.084,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.143:0.861,0.135,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.931,0.067,0.002	0|0:0:1,0,0	0|0:0.071:0.93,0.068,0.002	0|0:0:1,0,0	0|0:0.044:0.959,0.039,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.375:0.663,0.3,0.038	0|0:0.034:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.755:0.003,0.24,0.757	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18691370	SNP-3.18690129.	C	A	.	PASS	AR2=0.945;DR2=0.95;AF=0.451	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.882:0.313,0.491,0.195	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:0.861:0.325,0.49,0.186	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.636:0.455,0.453,0.091	1|0:1:0,1,0	0|0:0:1,0,0	0|1:0.863:0.324,0.49,0.186	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.861:0.325,0.49,0.186	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:0.862:0.307,0.524,0.169	1|0:0.861:0.325,0.49,0.186	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.988:0.022,0.968,0.01	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:1.082:0.263,0.391,0.345	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.292:0.191,0.325,0.484	0|1:1:0,1,0	1|1:2:0,0,1	1|0:0.863:0.324,0.49,0.186	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.04:0.96,0.039,0	0|0:0:1,0,0	0|0:0.878:0.315,0.492,0.193	0|1:1.078:0.265,0.391,0.344	1|0:0.861:0.324,0.49,0.186	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.861:0.325,0.49,0.186	1|1:2:0,0,1	0|0:0.862:0.324,0.49,0.186	0|0:0.861:0.325,0.49,0.186	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.861:0.325,0.49,0.186	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.868:0.321,0.491,0.188	1|0:0.861:0.325,0.49,0.186	0|1:0.868:0.321,0.491,0.188	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.861:0.325,0.49,0.186	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18691782	SNP-3.18690541.	A	G	.	PASS	AR2=1;DR2=1;AF=0.247	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18691986	SNP-3.18690745.	C	A	.	PASS	AR2=0.995;DR2=0.996;AF=0.488	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.11:0.892,0.105,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.118:0.885,0.111,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.238:0.794,0.174,0.032	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.184:0.827,0.163,0.011	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.87:0.008,0.114,0.878	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.006:0.043,0.907,0.05	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.086:0.916,0.082,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.982:0,0.018,0.982	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.079:0.923,0.074,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18692796	SNP-3.18691555.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.477	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.107:0.893,0.107,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.035:0.965,0.035,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18693936	SNP-3.18692695.	C	A	.	PASS	AR2=0.969;DR2=0.976;AF=0.402	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.611:0.461,0.468,0.072	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.262:0.757,0.224,0.019	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.037:0.963,0.036,0.001	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.085:0.915,0.085,0	0|0:0.045:0.956,0.044,0	0|0:0.1:0.902,0.096,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.624:0.445,0.486,0.069	0|0:0.298:0.722,0.257,0.02	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.094:0.906,0.094,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.947,0.052,0.001	0|0:0.31:0.714,0.262,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.04:0.961,0.037,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.324:0.701,0.275,0.024	0|0:0.287:0.734,0.246,0.02	0|0:0.425:0.616,0.343,0.041	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.033:0.141,0.685,0.174	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	0|0:0.047:0.954,0.045,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.974:0,0.025,0.974	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.04:0.961,0.039,0	0|0:0.033:0.967,0.033,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.134:0.871,0.124,0.005	0|0:0.098:0.905,0.092,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.597:0.475,0.453,0.072	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.959,0.04,0.002	0|0:0:1,0,0	1|0:0.733:0.394,0.478,0.127	1|1:2:0,0,1	0|0:0.042:0.958,0.041,0.001	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.299:0.724,0.252,0.023	0|0:0.167:0.838,0.157,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.634:0.439,0.488,0.073	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.186:0.826,0.162,0.012	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:1.978:0,0.021,0.979	0|0:0:1,0,0	0|0:0.03:0.971,0.029,0	0|0:0.046:0.954,0.046,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18694773	SNP-3.18693532.	C	A	.	PASS	AR2=0.975;DR2=0.98;AF=0.336	GT:DS:GP	0|0:0.16:0.846,0.147,0.007	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.46:0.115,0.311,0.575	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.25:0.179,0.393,0.429	0|0:0.017:0.983,0.016,0	0|0:0.058:0.942,0.058,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.919:0.002,0.077,0.921	0|0:0:1,0,0	0|0:0.095:0.909,0.087,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0.04:0.96,0.04,0	0|1:1:0,1,0	0|0:0.086:0.917,0.08,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.074:0.927,0.072,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.967:0,0.033,0.967	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.88:0.006,0.108,0.886	1|0:1:0,1,0	1|1:1.928:0.001,0.07,0.929	1|1:1.912:0.004,0.08,0.916	1|1:2:0,0,1	1|1:1.887:0.004,0.106,0.891	1|1:1.952:0.001,0.046,0.953	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.782:0.006,0.206,0.788	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.779:0.006,0.209,0.785	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|1:0.875:0.344,0.438,0.218	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.944:0.001,0.054,0.945	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.683:0.031,0.256,0.713	0|0:0.063:0.937,0.063,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.936,0.063,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.858:0.008,0.126,0.866	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.039:0.962,0.037,0.001	0|0:0.068:0.934,0.064,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.064:0.223,0.49,0.287	0|0:0:1,0,0
+3	18695016	SNP-3.18693775.	A	G	.	PASS	AR2=0.995;DR2=0.996;AF=0.206	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.158:0.85,0.141,0.008	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.942,0.057,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.943,0.057,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.976,0.024,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.441:0.604,0.351,0.045	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18697802	SNP-3.18696561.	A	G	.	PASS	AR2=0.986;DR2=0.988;AF=0.225	GT:DS:GP	1|0:1.341:0.101,0.457,0.442	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.163:0.837,0.163,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.913:0.002,0.082,0.916	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.674:0.049,0.228,0.723	1|0:1:0,1,0	1|1:1.787:0.014,0.185,0.801	0|0:0:1,0,0	1|1:1.778:0.009,0.203,0.788	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.032:0.968,0.032,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.066:0.103,0.728,0.169	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.789:0.014,0.183,0.803	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.969:0.001,0.03,0.969	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1
+3	18697909	SNP-3.18696668.	C	A	.	PASS	AR2=0.919;DR2=0.935;AF=0.339	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.349:0.676,0.299,0.025	1|1:2:0,0,1	0|0:0.245:0.77,0.216,0.014	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.636:0.038,0.289,0.673	1|1:1.66:0.027,0.287,0.687	1|1:2:0,0,1	0|1:0.878:0.241,0.64,0.119	0|0:0.062:0.938,0.061,0	0|0:0:1,0,0	0|0:0.097:0.906,0.091,0.003	0|0:0:1,0,0	1|1:1.837:0.009,0.145,0.846	0|0:0:1,0,0	0|0:0.032:0.968,0.032,0	0|0:0:1,0,0	1|0:0.802:0.372,0.453,0.175	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.075:0.927,0.071,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.96,0.04,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.946,0.053,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.964,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.092:0.909,0.091,0.001	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.84:0.004,0.152,0.844	1|1:2:0,0,1	1|1:1.49:0.101,0.308,0.591	1|1:2:0,0,1	1|1:1.308:0.117,0.458,0.425	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.246:0.146,0.462,0.392	1|1:1.814:0.006,0.174,0.82	1|1:1.459:0.076,0.388,0.535	1|0:1.22:0.159,0.463,0.378	1|1:1.525:0.065,0.346,0.59	0|0:0:1,0,0	1|1:1.438:0.082,0.398,0.52	1|1:1.718:0.002,0.279,0.719	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.715:0.02,0.244,0.735	0|0:0:1,0,0	0|1:1.422:0.087,0.405,0.508	0|0:0:1,0,0	1|1:1.77:0.011,0.208,0.781	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.026:0.975,0.025,0	1|1:2:0,0,1	1|0:1.214:0.162,0.463,0.375	1|1:1.678:0.028,0.266,0.706	1|1:1.654:0.032,0.282,0.686	1|1:1.674:0.027,0.272,0.701	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.884:0.002,0.112,0.886	1|1:1.767:0.014,0.206,0.78	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.689:0.024,0.263,0.713	1|1:2:0,0,1	1|1:1.833:0.009,0.149,0.842	1|1:1.98:0,0.019,0.98	1|1:1.943:0.002,0.054,0.944	1|1:1.592:0.027,0.355,0.618	1|1:1.81:0.002,0.185,0.813	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.428:0.105,0.363,0.533	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.673:0.029,0.269,0.702	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.605:0.056,0.283,0.661	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.105:0.898,0.099,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.267:0.745,0.242,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.649:0.036,0.279,0.685	0|0:0.089:0.913,0.085,0.002	0|0:0.094:0.909,0.088,0.003	0|0:0:1,0,0	0|0:0.214:0.79,0.207,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0.041:0.96,0.04,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.773:0.012,0.203,0.785	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.96,0.039,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.145:0.861,0.132,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.064:0.938,0.061,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.118:0.887,0.108,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.845:0.009,0.138,0.854	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:1.872:0.006,0.116,0.878	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.66:0.018,0.304,0.678	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.661:0.035,0.27,0.695	1|1:2:0,0,1	0|0:0.315:0.708,0.27,0.023	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0.26:0.748,0.244,0.008	1|1:1.804:0.009,0.177,0.814	0|0:0:1,0,0
+3	18707780	SNP-3.18706539.	C	A	.	PASS	AR2=0.976;DR2=0.979;AF=0.367	GT:DS:GP	0|0:0.077:0.924,0.075,0.001	1|1:2:0,0,1	0|0:0.093:0.909,0.09,0.001	1|1:1.893:0.002,0.103,0.895	0|0:0.148:0.858,0.136,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.052:0.948,0.052,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.807:0.015,0.163,0.822	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.153:0.848,0.15,0.002	0|0:0.109:0.894,0.104,0.002	0|0:0:1,0,0	0|0:0.113:0.89,0.107,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.078:0.923,0.076,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.905,0.093,0.002	0|0:0:1,0,0	0|0:0.083:0.919,0.079,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.946:0.001,0.051,0.948	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.887:0.005,0.103,0.892	1|1:2:0,0,1	1|1:1.902:0.004,0.089,0.906	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.851:0.005,0.14,0.855	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.959:0,0.04,0.959	0|0:0:1,0,0	1|1:1.811:0.015,0.159,0.826	1|1:1.842:0.003,0.153,0.845	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.985:0,0.015,0.985	0|1:1:0,1,0	1|1:1.765:0.013,0.209,0.778	1|1:1.744:0.013,0.231,0.757	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.894:0.005,0.096,0.899	0|1:1:0,1,0	1|1:1.99:0,0.009,0.991	1|1:2:0,0,1	1|1:1.914:0.001,0.083,0.916	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.347:0.684,0.284,0.032	0|0:0.198:0.803,0.196,0.001	0|0:0.057:0.944,0.055,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.157:0.849,0.145,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.034:0.966,0.033,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.106:0.896,0.101,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.055:0.946,0.053,0.001	1|0:0.829:0.332,0.507,0.161	0|0:0.055:0.946,0.053,0.001	0|0:0.111:0.892,0.106,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.763:0.017,0.203,0.78	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.962,0.037,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.941:0.001,0.057,0.942	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.715:0.021,0.242,0.736	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.956:0,0.043,0.957	0|0:0:1,0,0
+3	18710665	SNP-3.18709424.	C	A	.	PASS	AR2=0.973;DR2=0.978;AF=0.39	GT:DS:GP	0|0:0.283:0.737,0.243,0.02	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.936,0.063,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.242:0.774,0.209,0.017	1|1:2:0,0,1	0|0:0.021:0.979,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.936,0.063,0.001	0|0:0:1,0,0	0|0:0.066:0.935,0.064,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.924,0.075,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.039:0.961,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.188:0.818,0.175,0.006	0|0:0:1,0,0	0|0:0.298:0.725,0.252,0.023	1|0:1:0,1,0	0|0:0.28:0.74,0.24,0.02	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.427:0.67,0.232,0.097	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0.369:0.664,0.302,0.033	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.167:0.836,0.161,0.003	1|0:1:0,1,0	0|0:0.058:0.942,0.057,0.001	0|1:0.435:0.612,0.341,0.047	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.089:0.916,0.079,0.005	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.272:0.745,0.238,0.017	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.038:0.962,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.277:0.743,0.236,0.02	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.07:0.931,0.068,0.001	1|0:1:0,1,0	0|0:0.062:0.939,0.06,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.958,0.042,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.218:0.793,0.197,0.01	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.297:0.726,0.252,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.288:0.714,0.283,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.09:0.913,0.084,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.075:0.926,0.072,0.001	0|0:0.072:0.929,0.07,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.148:0.855,0.142,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.242:0.774,0.21,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.016:0.984,0.016,0
+3	18712119	SNP-3.18710878.	C	A	.	PASS	AR2=0.994;DR2=0.996;AF=0.338	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.504:0.087,0.321,0.592	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.725:0.276,0.723,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.989:0,0.011,0.989	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.656:0.021,0.301,0.677	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18714288	SNP-3.18713047.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.376	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.888:0.004,0.105,0.892	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.104:0.9,0.097,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.945,0.055,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.964,0.036,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.071:0.931,0.068,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.916:0.002,0.08,0.918	1|1:1.85:0.003,0.143,0.854	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.932:0,0.067,0.933	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.952:0.001,0.045,0.953	0|0:0.105:0.898,0.1,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.095:0.908,0.088,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.19:0.819,0.172,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.912:0.002,0.085,0.913	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.969:0,0.03,0.969	0|0:0:1,0,0
+3	18716479	SNP-3.18715238.	C	A	.	PASS	AR2=1;DR2=1;AF=0.358	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18718548	SNP-3.18717307.	A	G	.	PASS	AR2=0.984;DR2=0.986;AF=0.304	GT:DS:GP	1|1:1.898:0,0.102,0.898	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.179:0.829,0.162,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.142:0.864,0.13,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.064:0.937,0.062,0.001	0|0:0.085:0.917,0.081,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.165:0.837,0.161,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.962,0.038,0.001	0|0:0:1,0,0	0|0:0.058:0.943,0.056,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.961,0.039,0.001	0|0:0.043:0.958,0.042,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.054:0.946,0.053,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.955,0.045,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.036:0.964,0.035,0	0|0:0:1,0,0	0|0:0.271:0.741,0.247,0.012	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.106:0.897,0.101,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.133:0.875,0.118,0.008	0|0:0:1,0,0	1|1:1.819:0,0.181,0.819	0|0:0:1,0,0	0|0:0.031:0.97,0.03,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.961:0.153,0.733,0.114	0|0:0.024:0.976,0.023,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.953,0.046,0.001	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.961,0.039,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.944,0.055,0.001	0|0:0.123:0.879,0.118,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.099:0.903,0.094,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.082:0.92,0.077,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.362:0.664,0.309,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.234:0.768,0.229,0.003	0|0:0.067:0.934,0.066,0.001	0|0:0.043:0.958,0.041,0.001	1|1:2:0,0,1
+3	18721636	SNP-3.18720395.	A	G	.	PASS	AR2=1;DR2=1;AF=0.241	GT:DS:GP	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18722594	SNP-3.18721353.	A	G	.	PASS	AR2=0.987;DR2=0.99;AF=0.253	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.591:0.04,0.329,0.631	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.99:0.062,0.885,0.052	0|0:0:1,0,0	1|1:1.884:0.004,0.109,0.887	1|1:1.721:0.014,0.25,0.736	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.721:0.015,0.248,0.737	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.892:0.003,0.102,0.895	1|0:1:0,1,0	1|1:1.896:0.003,0.099,0.899	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.758:0.009,0.223,0.767	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.543:0.048,0.36,0.591	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	18728215	SNP-3.18726974.	C	A	.	PASS	AR2=1;DR2=1;AF=0.37	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.956,0.043,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18729426	SNP-3.18728185.	A	G	.	PASS	AR2=0.864;DR2=0.909;AF=0.448	GT:DS:GP	1|0:0.779:0.355,0.511,0.134	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.903:0.004,0.089,0.907	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.871:0.003,0.122,0.875	1|0:0.666:0.436,0.461,0.103	1|1:1.835:0.007,0.15,0.842	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.652:0.455,0.438,0.107	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.786:0.014,0.187,0.8	1|1:1.838:0.007,0.147,0.846	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.85:0.006,0.139,0.855	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.633:0.466,0.436,0.098	1|1:1.971:0,0.029,0.971	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.954:0.002,0.043,0.955	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.692:0.427,0.453,0.119	0|0:0.646:0.437,0.479,0.084	1|0:0.76:0.397,0.446,0.157	0|0:0.648:0.458,0.437,0.106	0|0:0.665:0.445,0.445,0.11	1|0:0.678:0.434,0.454,0.112	1|1:2:0,0,1	1|1:0.642:0.462,0.434,0.104	0|0:0.566:0.515,0.404,0.081	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.56:0.516,0.407,0.077	1|1:2:0,0,1	0|0:0.568:0.513,0.406,0.081	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.644:0.46,0.435,0.105	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.58:0.505,0.41,0.085	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.57:0.512,0.407,0.082	0|0:0.663:0.445,0.446,0.109	0|0:0.624:0.473,0.43,0.097	1|1:1.808:0.008,0.175,0.816	1|1:1.062:0.179,0.58,0.241	1|1:2:0,0,1	0|0:0.644:0.459,0.437,0.104	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.943:0.002,0.054,0.945	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.683:0.434,0.45,0.116	1|1:2:0,0,1	1|1:1.922:0.001,0.076,0.923	0|0:0.684:0.432,0.452,0.116	1|1:2:0,0,1	0|1:0.598:0.492,0.417,0.09	1|1:2:0,0,1	1|1:1.92:0.002,0.075,0.923	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.815:0.01,0.165,0.825	0|0:0.63:0.465,0.44,0.095	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.829:0.008,0.156,0.836	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.726:0.018,0.239,0.743	0|0:0.612:0.48,0.428,0.092	1|1:1.912:0.002,0.083,0.915	1|1:2:0,0,1	0|0:0.716:0.408,0.468,0.124	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.89:0.003,0.104,0.893	1|1:2:0,0,1	1|1:1.869:0.004,0.122,0.874	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.588:0.499,0.413,0.087	1|1:1.914:0.003,0.08,0.917	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.645:0.464,0.427,0.109	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.706:0.418,0.459,0.123	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.588:0.499,0.413,0.087	0|0:0.606:0.485,0.424,0.091	0|1:0.724:0.405,0.465,0.13	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.531:0.538,0.392,0.07	0|0:0.609:0.483,0.425,0.092	0|0:0.572:0.508,0.412,0.08	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.568:0.513,0.406,0.081	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.64:0.462,0.437,0.102	1|1:1.847:0.006,0.14,0.854	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.455:0.61,0.325,0.065	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.587:0.5,0.413,0.087	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.587:0.5,0.413,0.087	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.515:0.554,0.376,0.069	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.516:0.068,0.349,0.584	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.586:0.5,0.413,0.087
+3	18730511	SNP-3.18729270.	A	G	.	PASS	AR2=0.945;DR2=0.956;AF=0.458	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.673:0.027,0.273,0.7	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.695:0.023,0.26,0.718	1|1:2:0,0,1	1|1:1.673:0.027,0.272,0.7	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.496:0.058,0.388,0.554	1|1:1.572:0.04,0.349,0.612	1|1:2:0,0,1	1|1:1.755:0.018,0.21,0.772	0|0:0:1,0,0	1|1:1.723:0.021,0.236,0.744	0|1:1:0,1,0	1|1:1.662:0.031,0.276,0.693	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.719:0.02,0.24,0.739	1|1:1.531:0.058,0.354,0.589	1|1:1.674:0.035,0.257,0.708	0|1:1:0,1,0	1|1:1.661:0.028,0.284,0.688	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.271:0.041,0.647,0.312	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.874:0.007,0.112,0.881	0|0:0:1,0,0	1|1:1.68:0.029,0.263,0.708	1|1:1.714:0.019,0.249,0.732	1|1:1.719:0.018,0.245,0.737	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.763:0.01,0.217,0.773	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.791:0.01,0.189,0.801	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.789:0.007,0.198,0.796	1|1:1.832:0.006,0.155,0.839	1|1:1.644:0.032,0.291,0.676	0|0:0:1,0,0	1|1:1.674:0.027,0.273,0.7	1|1:2:0,0,1	1|1:1.645:0.033,0.288,0.678	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.767:0.01,0.212,0.777	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.167:0.833,0.167,0	1|1:1.673:0.027,0.273,0.7	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.561:0.048,0.344,0.609	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.697:0.023,0.257,0.72	1|1:1.684:0.025,0.265,0.709	1|1:2:0,0,1	1|1:1.869:0.005,0.121,0.874	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.812:0.008,0.172,0.82	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.716:0.02,0.245,0.736	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.731:0.018,0.234,0.748	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.557:0.055,0.332,0.612	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.82:0.005,0.169,0.826	1|1:1.705:0.022,0.251,0.727	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.612:0.04,0.308,0.652	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.962:0.001,0.036,0.963	1|1:1.722:0.043,0.192,0.765	1|1:1.899:0.003,0.095,0.902	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.962:0.001,0.037,0.963	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.727:0.02,0.233,0.747	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.77:0.015,0.2,0.785	0|0:0:1,0,0	1|1:2:0,0,1
+3	18732079	SNP-3.18730838.	C	A	.	PASS	AR2=0.972;DR2=0.982;AF=0.336	GT:DS:GP	0|0:0:1,0,0	1|1:1.97:0.001,0.028,0.971	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.961:0,0.038,0.961	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.932:0.367,0.334,0.299	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.545:0.539,0.378,0.083	1|1:1.927:0,0.073,0.927	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.509:0.57,0.351,0.079	0|1:0.828:0.33,0.512,0.158	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.915:0.002,0.081,0.917	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.273:0.73,0.267,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0,0.024,0.976	0|0:0:1,0,0	1|1:1.981:0,0.019,0.981	0|0:0:1,0,0	1|1:1.975:0,0.025,0.975	0|0:0:1,0,0	1|1:1.956:0,0.044,0.956	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.33:0.262,0.145,0.593	0|0:0:1,0,0	1|0:1.302:0.056,0.586,0.358	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:1.952:0,0.047,0.952	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.957,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.976:0,0.023,0.977	0|0:0:1,0,0	1|1:1.968:0,0.032,0.968	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.048:0.953,0.047,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:1.974:0,0.026,0.974	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.866:0.007,0.12,0.873	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.958:0,0.042,0.958	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.776:0.007,0.209,0.784	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18733051	SNP-3.18731810.	C	A	.	PASS	AR2=0.995;DR2=0.996;AF=0.35	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.935:0.002,0.061,0.937	1|1:2:0,0,1	1|1:1.979:0,0.021,0.979	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.988,0.012,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.938:0.002,0.058,0.94	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.939:0.001,0.06,0.939	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.357:0.645,0.353,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.957:0.001,0.041,0.958	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.977:0,0.023,0.977	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:1.847:0.004,0.145,0.851	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.95:0.002,0.047,0.952	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.009,0	1|1:1.963:0.001,0.034,0.965	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	0|0:0.019:0.981,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.911:0.001,0.086,0.912	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.948:0,0.051,0.949	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0
+3	18733512	SNP-3.18732271.	C	A	.	PASS	AR2=0.945;DR2=0.955;AF=0.402	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.174:0.827,0.173,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.898:0.002,0.098,0.9	1|1:1.829:0.009,0.153,0.838	1|1:2:0,0,1	0|0:0.286:0.733,0.247,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.251:0.766,0.217,0.017	0|0:0.142:0.864,0.13,0.006	1|1:1.767:0.015,0.203,0.782	0|0:0:1,0,0	0|0:0.31:0.716,0.259,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.282:0.739,0.24,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.789:0.33,0.552,0.119	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.309:0.717,0.256,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.136:0.871,0.123,0.007	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.255:0.764,0.217,0.019	0|0:0.238:0.773,0.216,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.203:0.805,0.187,0.008	0|0:0.24:0.773,0.215,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.237:0.778,0.207,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.156:0.852,0.14,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.223:0.792,0.194,0.015	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.112:0.89,0.107,0.002	0|0:0:1,0,0	0|0:0.157:0.847,0.15,0.004	0|0:0.112:0.89,0.107,0.003	0|0:0.378:0.659,0.305,0.037	0|0:0.168:0.834,0.165,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.317:0.711,0.262,0.027	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.903:0.001,0.095,0.904	1|1:2:0,0,1	1|1:1.769:0.015,0.201,0.784	1|1:2:0,0,1	1|1:1.674:0.027,0.271,0.701	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.873:0.004,0.119,0.877	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:1.913:0.001,0.085,0.914	0|0:0.191:0.815,0.179,0.006	1|1:2:0,0,1	1|1:1.685:0.026,0.263,0.711	1|1:2:0,0,1	1|1:1.786:0.013,0.188,0.799	1|1:2:0,0,1	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.229:0.781,0.21,0.009	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0.291:0.731,0.248,0.022	0|0:0:1,0,0	0|0:0.11:0.896,0.098,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.807:0.009,0.175,0.816	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.123:0.88,0.117,0.003	0|0:0.008:0.992,0.008,0	0|0:0.058:0.944,0.054,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.235:0.78,0.204,0.016	1|1:1.55:0.052,0.346,0.602	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.088:0.914,0.084,0.002	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.388:0.657,0.297,0.045	0|0:0.012:0.988,0.012,0	0|0:0.261:0.753,0.233,0.014	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.231:0.781,0.206,0.012	1|1:1.932:0.001,0.066,0.933	0|0:0.084:0.921,0.074,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.167:0.839,0.154,0.006	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.976:0,0.023,0.976	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.233:0.782,0.204,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.275:0.746,0.234,0.02	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.213:0.798,0.191,0.011	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.304:0.714,0.268,0.018	0|0:0.216:0.799,0.187,0.015	1|1:2:0,0,1	0|0:0:1,0,0
+3	18734715	SNP-3.18733474.	A	G	.	PASS	AR2=0.891;DR2=0.914;AF=0.218	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.981,0.019,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.008:0.249,0.493,0.257	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.106:0.899,0.097,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.462:0.578,0.383,0.039	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.957:0.277,0.489,0.234	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.866:0.336,0.461,0.202	1|0:0.872:0.322,0.484,0.194	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.882:0.316,0.487,0.198	0|0:0:1,0,0	1|0:0.76:0.248,0.745,0.008	0|0:0:1,0,0	0|0:0.429:0.577,0.416,0.006	0|0:0.588:0.511,0.389,0.1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.337:0.674,0.314,0.011	0|0:0.253:0.769,0.209,0.022	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.629:0.046,0.279,0.675	0|0:0:1,0,0	0|0:0.346:0.66,0.334,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.153:0.848,0.15,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.491:0.568,0.374,0.059	0|1:0.647:0.437,0.478,0.085	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.093:0.91,0.086,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.896:0,0.104,0.896	0|0:0:1,0,0	0|0:0.495:0.566,0.373,0.061	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.711:0.482,0.325,0.193	0|0:0:1,0,0	0|0:0.288:0.721,0.269,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.091:0.911,0.086,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.06:0.94,0.059,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.22:0.163,0.455,0.382	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.968,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.096:0.906,0.092,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.223:0.192,0.394,0.415	0|0:0:1,0,0	0|0:0.043:0.958,0.041,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.52:0.547,0.385,0.068	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.115:0.219,0.446,0.334	1|1:2:0,0,1	0|0:0.429:0.62,0.331,0.049	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.205:0.8,0.194,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.012:0.252,0.485,0.264	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.276:0.731,0.262,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.12:0.885,0.111,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.954:0.279,0.488,0.233	1|1:2:0,0,1	1|1:2:0,0,1	1|1:0.994:0.264,0.478,0.258	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.218:0.796,0.189,0.015	0|0:0.192:0.816,0.177,0.008	0|1:0.944:0.28,0.496,0.224	0|1:0.892:0.323,0.463,0.215	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.866:0.338,0.459,0.203	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18739438	SNP-3.18738197.	A	G	.	PASS	AR2=0.844;DR2=0.89;AF=0.255	GT:DS:GP	0|0:0.305:0.728,0.239,0.033	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.568:0.522,0.387,0.09	0|0:0:1,0,0	0|0:0.291:0.736,0.237,0.027	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.195:0.208,0.389,0.403	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.334:0.701,0.263,0.036	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.226:0.787,0.2,0.013	0|0:0.521:0.545,0.389,0.066	0|0:0:1,0,0	0|0:0.379:0.657,0.307,0.036	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.449:0.603,0.346,0.051	0|0:0.935:0.318,0.43,0.252	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.885:0.269,0.576,0.154	1|1:2:0,0,1	0|0:0.112:0.9,0.088,0.012	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.353:0.691,0.265,0.044	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.293:0.731,0.244,0.025	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.356:0.688,0.268,0.044	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.261:0.139,0.462,0.399	0|0:0.524:0.551,0.373,0.076	1|1:2:0,0,1	1|0:0.384:0.657,0.302,0.041	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.556:0.527,0.39,0.083	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.962,0.038,0	1|1:1.815:0.011,0.164,0.825	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.316:0.705,0.274,0.021	0|1:0.699:0.36,0.581,0.059	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.2:0.802,0.197,0.001	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0.085:0.915,0.085,0	0|0:0:1,0,0	0|0:0.459:0.606,0.329,0.065	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.958:0.124,0.795,0.081	0|0:0:1,0,0	0|0:0.339:0.706,0.249,0.045	1|0:1.467:0.049,0.434,0.517	0|1:0.862:0.312,0.515,0.174	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.139:0.862,0.137,0.001	0|1:1.076:0.202,0.52,0.278	0|0:0.588:0.501,0.411,0.089	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0.148:0.852,0.147,0.001	0|0:0.577:0.508,0.406,0.086	0|0:0.555:0.509,0.426,0.064	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.367:0.678,0.277,0.045	1|1:2:0,0,1	0|1:1.183:0.114,0.589,0.297	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.253:0.766,0.216,0.018	0|0:0:1,0,0	0|0:0.247:0.773,0.207,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.273:0.746,0.234,0.019	0|0:0:1,0,0	0|0:0.607:0.487,0.42,0.093	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.438:0.608,0.345,0.046	0|0:0.399:0.637,0.327,0.036	0|0:0.527:0.519,0.434,0.046	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.579:0.519,0.383,0.098	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.174:0.095,0.636,0.269	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.87:0.385,0.359,0.256	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.089:0.913,0.085,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.237:0.782,0.199,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.281:0.747,0.225,0.028	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.507:0.561,0.371,0.068	0|0:0.624:0.478,0.419,0.102	0|0:0.513:0.577,0.333,0.09	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.511:0.096,0.298,0.607	0|0:0.314:0.715,0.257,0.029	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.308:0.722,0.247,0.031	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.171:0.839,0.151,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.721:0.437,0.405,0.158	1|1:2:0,0,1	0|0:0.377:0.66,0.304,0.037	1|1:2:0,0,1	1|1:2:0,0,1
+3	18745988	SNP-3.18744747.	C	A	.	PASS	AR2=0.981;DR2=0.985;AF=0.406	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.228:0.785,0.202,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.223:0.79,0.197,0.013	0|0:0:1,0,0	0|0:0.051:0.949,0.051,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0.051:0.952,0.045,0.003	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.107:0.894,0.106,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.183:0.825,0.166,0.008	0|0:0.185:0.822,0.17,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.156:0.852,0.141,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.311:0.71,0.269,0.021	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:0.547:0.505,0.442,0.052	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.134:0.87,0.126,0.004	0|0:0:1,0,0	0|0:0.288:0.73,0.253,0.017	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.226:0.787,0.2,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.229:0.784,0.202,0.013	0|0:0:1,0,0	0|0:0.219:0.793,0.194,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.21:0.801,0.187,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.22:0.793,0.195,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.993,0.007,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.204:0.807,0.182,0.011	0|0:0.134:0.872,0.123,0.005	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18747914	SNP-3.18746673.	C	A	.	PASS	AR2=0.979;DR2=0.984;AF=0.396	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.476:0.583,0.359,0.059	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.213:0.787,0.213,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.511:0.555,0.379,0.066	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.077:0.925,0.074,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.295:0.713,0.279,0.008	0|0:0.239:0.765,0.231,0.004	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.07:0.931,0.068,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.128:0.878,0.115,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.907,0.088,0.004	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.712:0.375,0.537,0.087	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.115:0.889,0.107,0.004	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.162:0.844,0.149,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.338:0.691,0.28,0.029	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.183:0.825,0.167,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.143:0.867,0.123,0.01	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.511:0.555,0.379,0.066	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.121:0.885,0.108,0.006	0|0:0:1,0,0	0|0:0.127:0.877,0.118,0.004	1|1:2:0,0,1	0|0:0:1,0,0
+3	18749265	SNP-3.18748024.	A	G	.	PASS	AR2=0.952;DR2=0.962;AF=0.451	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	1|1:1.885:0.005,0.105,0.89	1|1:1.533:0.008,0.452,0.54	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.976:0.001,0.023,0.976	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.633:0.02,0.327,0.653	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.631:0.033,0.303,0.664	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.839:0.007,0.147,0.846	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.731:0.019,0.23,0.75	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.908:0.003,0.086,0.911	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.94:0.002,0.056,0.942	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.753:0.013,0.222,0.765	1|1:1.867:0.006,0.122,0.873	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.939:0.001,0.058,0.94	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.994:0,0.006,0.994	1|0:1:0,1,0	0|1:0.943:0.104,0.848,0.048	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.296:0.715,0.274,0.011	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.049:0.951,0.048,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.145:0.867,0.122,0.011	0|0:0.04:0.96,0.04,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.916:0.287,0.51,0.203	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.043:0.958,0.041,0.001	0|0:0.358:0.647,0.348,0.005	1|1:1.502:0.059,0.38,0.561	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.669:0.028,0.275,0.697	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.804:0.358,0.479,0.163	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.01:0.25,0.489,0.261	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.873:0.004,0.119,0.877	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.628:0.035,0.301,0.664	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.046:0.955,0.043,0.001	1|0:0.919:0.294,0.493,0.213	1|1:2:0,0,1	1|1:1.801:0.01,0.179,0.811	0|1:1.081:0.146,0.626,0.227	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.059:0.942,0.058,0	1|0:1:0,1,0	0|0:0.047:0.954,0.045,0.001	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.397:0.091,0.42,0.489	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	0|0:0.021:0.979,0.021,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.695:0.022,0.262,0.716	1|1:1.972:0.001,0.027,0.972	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.702:0.022,0.253,0.724	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.534:0.495,0.477,0.029	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.948:0.002,0.047,0.95	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.485:0.102,0.311,0.587	0|0:0:1,0,0	1|1:2:0,0,1
+3	18749284	SNP-3.18748043.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.331	GT:DS:GP	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.057:0.945,0.053,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.941:0,0.059,0.941	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.626:0.038,0.299,0.664	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.846:0.007,0.14,0.853	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.967:0,0.032,0.967	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.843:0.008,0.141,0.851	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.838:0.007,0.147,0.845	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.96,0.039,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.866:0.007,0.119,0.874	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18749395	SNP-3.18748154.	A	G	.	PASS	AR2=0.93;DR2=0.947;AF=0.514	GT:DS:GP	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.852:0.334,0.48,0.186	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.216:0.098,0.589,0.313	0|1:1.024:0.097,0.783,0.12	1|1:2:0,0,1	1|1:1.715:0.02,0.244,0.735	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.287:0.735,0.242,0.023	1|1:1.983:0,0.017,0.983	0|0:0:1,0,0	1|0:1.264:0.105,0.527,0.368	1|1:1.736:0.034,0.196,0.77	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.612:0.036,0.315,0.649	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.703:0.022,0.253,0.725	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.474:0.005,0.517,0.479	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.89:0.004,0.102,0.894	1|0:1:0,1,0	1|0:1.385:0.021,0.573,0.406	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.63:0.057,0.255,0.687	1|1:1.913:0.002,0.083,0.915	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.583:0.001,0.415,0.584	1|1:2:0,0,1	0|1:1.133:0.179,0.51,0.311	1|1:2:0,0,1	0|0:0.769:0.398,0.434,0.167	1|1:1.896:0.002,0.101,0.897	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.985:0,0.015,0.985	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.671:0.001,0.328,0.672	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.966:0,0.033,0.967	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.968:0,0.031,0.969	1|0:1.141:0.071,0.717,0.212	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.841:0.003,0.153,0.844	1|1:1.976:0,0.024,0.976	1|0:1.332:0.008,0.653,0.34	1|1:1.525:0.057,0.36,0.583	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.973:0,0.026,0.974	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.314:0.717,0.251,0.031	1|1:1.977:0,0.023,0.977	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.627:0.035,0.303,0.662	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.21:0.084,0.622,0.294	1|1:2:0,0,1	0|1:1.258:0.122,0.497,0.381	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.376:0.027,0.57,0.403	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.747:0.34,0.573,0.087	1|1:1.96:0,0.039,0.96	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1.042:0.167,0.624,0.209	1|0:1.402:0.086,0.426,0.488	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.8:0.005,0.189,0.805	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.929:0.002,0.066,0.931	0|1:1.261:0.028,0.682,0.289	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.908:0.3,0.492,0.208	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:1.909:0.003,0.086,0.912	1|1:2:0,0,1	1|1:1.696:0.023,0.257,0.719	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.395:0.117,0.37,0.512	1|1:2:0,0,1	1|0:1.497:0.039,0.424,0.537	1|1:1.385:0.16,0.295,0.545	0|0:0:1,0,0	1|1:2:0,0,1
+3	18749735	SNP-3.18748494.	C	A	.	PASS	AR2=0.976;DR2=0.982;AF=0.377	GT:DS:GP	0|0:0:1,0,0	1|1:1.821:0.027,0.126,0.848	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.319:0.698,0.285,0.017	0|0:0.325:0.689,0.298,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.958,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0.021:0.98,0.02,0	0|0:0:1,0,0	0|0:0.078:0.923,0.076,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.939,0.061,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.967:0,0.033,0.967	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.82:0.007,0.167,0.826	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.074:0.01,0.907,0.084	1|1:2:0,0,1	1|1:1.606:0.008,0.377,0.615	1|0:1:0,1,0	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.979:0,0.021,0.979	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.245:0.005,0.746,0.25	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.123:0.882,0.114,0.004	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.592:0.497,0.415,0.088	0|0:0.287:0.726,0.26,0.014	0|0:0.11:0.894,0.103,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0.203:0.797,0.203,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.275:0.744,0.238,0.018	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.019:0.981,0.019,0	0|0:0.011:0.989,0.011,0	1|1:2:0,0,1	0|0:0.166:0.836,0.162,0.002	0|0:0:1,0,0	0|0:0.151:0.853,0.143,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.102:0.9,0.097,0.003	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.945,0.055,0	1|1:2:0,0,1	0|0:0.013:0.987,0.012,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.17:0.834,0.162,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.482:0.579,0.36,0.061	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.81:0,0.189,0.811	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18750724	SNP-3.18749483.	C	A	.	PASS	AR2=0.94;DR2=0.95;AF=0.381	GT:DS:GP	0|0:0.052:0.949,0.05,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.759:0.413,0.414,0.172	1|1:1.825:0.013,0.149,0.838	0|1:1.236:0.054,0.655,0.29	0|0:0.146:0.86,0.135,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.274:0.745,0.236,0.019	0|0:0:1,0,0	0|0:0.166:0.841,0.151,0.007	0|0:0.074:0.928,0.07,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.289:0.73,0.252,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.226:0.786,0.201,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.127:0.875,0.123,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.942,0.057,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.229:0.773,0.225,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.531:0.108,0.252,0.639	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.072:0.93,0.068,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.087:0.914,0.084,0.002	0|0:0:1,0,0	0|0:0.131:0.871,0.128,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.589:0.021,0.369,0.61	1|1:2:0,0,1	0|1:1.366:0.084,0.465,0.451	1|1:2:0,0,1	0|0:0.225:0.791,0.193,0.016	1|1:2:0,0,1	1|1:1.974:0,0.025,0.974	0|0:0:1,0,0	1|1:1.893:0.003,0.1,0.897	0|1:1.315:0.106,0.474,0.42	1|0:0.925:0.285,0.504,0.21	1|1:1.918:0.002,0.077,0.92	0|1:1.065:0.225,0.485,0.29	1|0:1.421:0.032,0.515,0.453	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.549:0.064,0.322,0.613	1|1:1.316:0.005,0.674,0.321	1|1:1.963:0,0.036,0.964	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.142:0.124,0.611,0.266	1|1:1.732:0.025,0.219,0.756	1|1:1.299:0.072,0.556,0.372	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.865:0.199,0.737,0.064	0|1:1.21:0.122,0.545,0.333	1|1:1.976:0,0.024,0.976	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.835:0.014,0.138,0.848	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.967:0.259,0.515,0.226	1|1:2:0,0,1	1|1:1.817:0.007,0.168,0.825	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.885:0.003,0.109,0.888	1|1:2:0,0,1	0|0:0.223:0.789,0.199,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.025,0.001	0|0:0:1,0,0	0|0:0.198:0.812,0.178,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.179:0.83,0.162,0.008	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.636:0,0.364,0.636	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0.076:0.925,0.074,0.001	0|0:0:1,0,0	0|0:0.104:0.899,0.098,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.212:0.799,0.19,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.8:0.01,0.181,0.81	0|0:0:1,0,0	0|0:0.258:0.755,0.231,0.013	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:1.96:0.001,0.038,0.961	1|1:2:0,0,1	0|0:0.215:0.798,0.188,0.014	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.094:0.907,0.092,0.001	0|0:0:1,0,0	0|0:0.146:0.858,0.137,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.243:0.776,0.206,0.018
+3	18751362	SNP-3.18750121.	C	A	.	PASS	AR2=0.997;DR2=0.998;AF=0.349	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.945:0,0.055,0.945	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.964:0,0.036,0.964	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.568:0.013,0.407,0.58	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.956,0.044,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18751506	SNP-3.18750265.	C	A	.	PASS	AR2=0.98;DR2=0.985;AF=0.396	GT:DS:GP	0|0:0.084:0.919,0.078,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.1:0.903,0.094,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.082:0.919,0.079,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.165:0.841,0.153,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.11:0.89,0.109,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.463:0.592,0.354,0.055	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.547:0.524,0.404,0.072	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.183:0.83,0.158,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.136:0.869,0.125,0.006	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.923:0,0.077,0.923	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.206:0.795,0.204,0.001	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.384:0.622,0.372,0.006	0|0:0.464:0.593,0.351,0.056	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.148:0.858,0.137,0.005	0|1:1:0,1,0	0|0:0.077:0.924,0.074,0.001	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.088:0.913,0.086,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.027,0.973	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.128:0.876,0.119,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.499:0.57,0.361,0.069	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18753459	SNP-3.18752218.	C	A	.	PASS	AR2=0.993;DR2=0.994;AF=0.331	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.88:0.004,0.112,0.884	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.925:0,0.074,0.926	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.694:0.021,0.264,0.715	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.556:0.028,0.387,0.584	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.89:0.003,0.104,0.893	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.207:0.042,0.709,0.249	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.91:0.003,0.083,0.913	0|0:0:1,0,0
+3	18753953	SNP-3.18752712.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.471	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.175:0.828,0.169,0.003	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.04:0.96,0.04,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18754343	SNP-3.18753102.	C	A	.	PASS	AR2=0.973;DR2=0.979;AF=0.315	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	1|1:2:0,0,1	0|0:0.208:0.792,0.207,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.096:0.905,0.094,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.574:0.002,0.423,0.575	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.804:0.014,0.167,0.819	1|1:1.971:0,0.029,0.971	0|0:0:1,0,0	1|1:1.914:0.002,0.081,0.916	1|1:1.931:0.002,0.066,0.933	1|1:2:0,0,1	1|1:1.859:0.003,0.134,0.863	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.746:0.015,0.224,0.761	1|1:1.841:0.006,0.146,0.847	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.549:0.067,0.317,0.616	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.356:0.122,0.399,0.479	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.684:0.03,0.256,0.714	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.839:0.004,0.153,0.843	1|1:2:0,0,1	1|1:1.961:0.001,0.037,0.962	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.952:0.001,0.046,0.953	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.827:0.009,0.155,0.836	1|1:2:0,0,1	1|1:1.837:0.006,0.152,0.842	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.909:0.004,0.084,0.913	0|0:0.167:0.834,0.165,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.016:0.984,0.016,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.43:0.163,0.245,0.593	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.944:0.001,0.053,0.945	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.91:0.002,0.086,0.912	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.854:0.008,0.13,0.862	1|1:1.956:0,0.044,0.956	1|1:2:0,0,1	1|1:1.872:0.007,0.114,0.879	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.937:0,0.062,0.938	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.893:0.001,0.105,0.894	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18755603	SNP-3.18754362.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.382	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.059:0.942,0.058,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.962,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18758727	SNP-3.18757486.	C	A	.	PASS	AR2=0.983;DR2=0.986;AF=0.343	GT:DS:GP	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.661:0.035,0.27,0.695	1|1:1.896:0.001,0.103,0.897	1|1:1.747:0.018,0.217,0.765	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.65:0.035,0.28,0.685	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.952,0.047,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0.059:0.941,0.059,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.954,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.837:0.006,0.151,0.843	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.938:0.001,0.061,0.939	1|1:1.815:0.008,0.169,0.823	1|1:1.72:0.022,0.236,0.742	1|1:2:0,0,1	1|1:1.788:0.011,0.189,0.8	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.944:0.001,0.054,0.945	0|0:0:1,0,0	1|1:1.98:0,0.02,0.98	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.902:0.001,0.097,0.902	0|0:0:1,0,0	1|1:1.769:0.018,0.195,0.787	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.952:0.001,0.046,0.953	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.843:0.006,0.145,0.849	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.932:0.001,0.066,0.933	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:1.944:0.001,0.054,0.945	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.942,0.057,0.001	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.643:0.037,0.283,0.68	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.968,0.032,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.959,0.04,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.963,0.037,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.937,0.062,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18759891	SNP-3.18758650.	C	A	.	PASS	AR2=0.974;DR2=0.98;AF=0.415	GT:DS:GP	0|0:0.044:0.957,0.043,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.045:0.956,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.23:0.78,0.209,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.237:0.777,0.209,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.247:0.764,0.224,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.957,0.043,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.026:0.974,0.025,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.117:0.885,0.114,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.083:0.92,0.077,0.003	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.374:0.668,0.29,0.042	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0	0|0:0.322:0.72,0.238,0.042	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0.23:0.781,0.208,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.036,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.657:0.391,0.562,0.047	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.425:0.632,0.312,0.057	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.181:0.827,0.165,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.176:0.831,0.162,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.513:0.561,0.364,0.075	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.079:0.923,0.075,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.516:0.504,0.475,0.02	0|0:0.237:0.771,0.221,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.945,0.055,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.991:0.172,0.666,0.163	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.245:0.775,0.205,0.02	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.163:0.844,0.149,0.007	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0.054:0.947,0.052,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0
+3	18761242	SNP-3.18760001.	C	A	.	PASS	AR2=0.993;DR2=0.993;AF=0.36	GT:DS:GP	0|0:0.016:0.984,0.016,0	1|1:1.88:0.006,0.107,0.886	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.938:0.001,0.06,0.939	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.034,0	0|0:0:1,0,0	0|0:0.03:0.97,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.027,0.973	1|1:1.862:0.004,0.13,0.866	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:1.934:0.001,0.065,0.934	1|1:2:0,0,1	1|1:1.883:0.003,0.111,0.886	1|1:1.96:0.001,0.039,0.961	1|1:1.964:0.001,0.034,0.965	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.067:0.933,0.067,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.964:0,0.035,0.964	1|1:2:0,0,1	1|1:1.84:0.002,0.155,0.842	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.128:0.873,0.125,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.303:0.762,0.173,0.065	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.971:0,0.029,0.971	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18761440	SNP-3.18760199.	A	G	.	PASS	AR2=0.978;DR2=0.982;AF=0.493	GT:DS:GP	1|1:1.917:0.003,0.077,0.92	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.787:0.009,0.194,0.797	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.773:0.011,0.204,0.785	1|1:1.931:0.001,0.066,0.933	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.926:0.002,0.069,0.929	1|1:1.764:0.016,0.204,0.78	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.788:0.009,0.194,0.797	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.812:0.009,0.17,0.821	1|1:1.843:0.006,0.145,0.849	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.969:0,0.03,0.97	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.922:0.002,0.074,0.924	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.836:0.002,0.16,0.838	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.97:0,0.03,0.97	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.857:0.143,0.857,0	1|1:1.672:0.029,0.27,0.701	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.716:0.008,0.267,0.724	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.876:0.005,0.114,0.881	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.864:0.006,0.124,0.87	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.824:0.004,0.168,0.828	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.79:0.009,0.192,0.799	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.913:0.002,0.082,0.916	1|1:1.807:0.006,0.18,0.813	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.844:0.006,0.144,0.85	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.971:0,0.029,0.971	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.9:0.013,0.075,0.912	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:1.967:0.001,0.032,0.968	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0.001,0.02,0.979	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:1.787:0.011,0.191,0.798	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.886:0.004,0.105,0.891	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.381:0.147,0.326,0.527	0|0:0:1,0,0	1|1:2:0,0,1
+3	18767602	SNP-3.18766361.	C	A	.	PASS	AR2=1;DR2=1;AF=0.354	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18767876	SNP-3.18766635.	C	A	.	PASS	AR2=1;DR2=1;AF=0.455	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.919:0.002,0.078,0.921	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18770394	SNP-3.18769153.	A	G	.	PASS	AR2=0.939;DR2=0.956;AF=0.451	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.395:0.084,0.437,0.479	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.297:0.13,0.442,0.428	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.745:0.021,0.213,0.766	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.525:0.052,0.372,0.577	1|1:1.717:0.02,0.244,0.736	1|1:1.504:0.056,0.385,0.56	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.657:0.03,0.283,0.687	1|1:1.686:0.022,0.271,0.708	0|1:1:0,1,0	1|1:1.315:0.103,0.48,0.418	1|1:1.952:0,0.047,0.953	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.408:0.077,0.439,0.485	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.63:0.032,0.306,0.662	1|1:2:0,0,1	1|1:1.6:0.016,0.367,0.616	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.969:0,0.03,0.97	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.638:0.009,0.343,0.647	1|1:1.857:0.001,0.14,0.858	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.62:0.011,0.358,0.631	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.827:0.009,0.154,0.837	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.247:0.753,0.247,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.605:0.01,0.374,0.615	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.312:0.128,0.432,0.44	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.806:0.01,0.173,0.816	1|1:1.617:0.037,0.31,0.654	1|0:1:0,1,0	0|1:1.503:0.057,0.382,0.561	1|0:1:0,1,0	1|1:1.953:0.001,0.046,0.954	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.757:0.014,0.214,0.772	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.559:0.055,0.331,0.614	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1.652:0.03,0.289,0.682	1|1:1.742:0.017,0.224,0.759	1|1:1.665:0.03,0.275,0.695	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.878:0.003,0.116,0.881	1|1:2:0,0,1	1|1:1.823:0.006,0.166,0.829	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.585:0.046,0.323,0.631	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.614:0.038,0.311,0.651	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.769:0.01,0.211,0.779	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.444:0.119,0.318,0.563	0|0:0:1,0,0	1|1:2:0,0,1
+3	18770657	SNP-3.18769416.	C	A	.	PASS	AR2=1;DR2=1;AF=0.356	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18770748	SNP-3.18769507.	C	A	.	PASS	AR2=1;DR2=1;AF=0.366	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.977,0.023,0	0|0:0:1,0,0	0|0:0.074:0.928,0.07,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18771856	SNP-3.18770615.	C	A	.	PASS	AR2=0.995;DR2=0.995;AF=0.475	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.036,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.105:0.898,0.1,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.103:0.899,0.098,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.185:0.831,0.154,0.016	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.815:0,0.184,0.816	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.123:0.88,0.116,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.897:0.003,0.098,0.899	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:1.854:0.018,0.11,0.872	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.923:0,0.077,0.923	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.09:0.911,0.089,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18772680	SNP-3.18771439.	A	G	.	PASS	AR2=0.912;DR2=0.925;AF=0.241	GT:DS:GP	0|0:0:1,0,0	0|0:0.246:0.778,0.198,0.024	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.794:0.419,0.368,0.213	1|1:2:0,0,1	0|1:1.274:0.129,0.468,0.403	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.221:0.794,0.191,0.015	0|1:1.037:0.231,0.502,0.268	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.098:0.217,0.468,0.315	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.061:0.214,0.511,0.275	1|1:1.565:0.023,0.389,0.588	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.922:0.289,0.499,0.212	1|1:2:0,0,1	0|1:1.16:0.164,0.511,0.324	1|1:2:0,0,1	0|1:1.031:0.214,0.541,0.245	1|1:1.196:0.166,0.472,0.362	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.107:0.897,0.099,0.004	0|0:0.015:0.985,0.015,0	1|1:2:0,0,1	0|0:0.072:0.929,0.07,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.132:0.874,0.119,0.006	0|0:0:1,0,0	0|0:0.243:0.769,0.218,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.941,0.059,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.11:0.894,0.103,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.958,0.041,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.035:0.965,0.035,0	0|0:0.007:0.993,0.006,0	0|0:0.759:0.393,0.455,0.152	1|0:1.291:0.124,0.462,0.415	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.243:0.14,0.477,0.383	1|1:2:0,0,1	0|1:1.047:0.236,0.481,0.283	1|0:0.759:0.388,0.465,0.147	1|1:2:0,0,1	1|0:1.276:0.119,0.485,0.395	1|0:1.115:0.179,0.526,0.294	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.572:0.06,0.308,0.632	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.093:0.908,0.09,0.001	1|1:2:0,0,1	1|0:1.148:0.176,0.499,0.324	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.038:0.962,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.761:0.386,0.467,0.147	0|0:0.331:0.706,0.257,0.037	0|1:1.308:0.13,0.433,0.438	1|0:0.707:0.417,0.46,0.124	0|0:0.89:0.335,0.44,0.225	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.954:0.253,0.54,0.207	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.052:0.949,0.049,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.064:0.938,0.06,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	18773308	SNP-3.18772067.	A	G	.	PASS	AR2=1;DR2=1;AF=0.251	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18774925	SNP-3.18773684.	C	A	.	PASS	AR2=0.982;DR2=0.986;AF=0.436	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.103:0.898,0.1,0.001	0|0:0.115:0.902,0.082,0.016	0|0:0.057:0.944,0.056,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.686:0.028,0.257,0.715	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.24:0.173,0.414,0.413	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.152:0.18,0.487,0.333	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.921:0.002,0.075,0.923	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.748:0,0.251,0.749	1|1:1.966:0,0.034,0.966	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.84:0.007,0.145,0.848	0|1:1.415:0.032,0.521,0.447	1|1:1.519:0.063,0.354,0.583	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.781:0.014,0.191,0.795	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:1.877:0.008,0.107,0.885	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.893:0.005,0.096,0.899	1|1:1.91:0.003,0.084,0.913	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.991:0,0.009,0.991	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.732:0.009,0.25,0.741	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.04:0.961,0.038,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18775732	SNP-3.18774491.	C	A	.	PASS	AR2=0.944;DR2=0.954;AF=0.418	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.097:0.905,0.092,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.113:0.887,0.113,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.087:0.915,0.083,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.09:0.911,0.087,0.002	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.294:0.723,0.259,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.921,0.077,0.002	0|0:0:1,0,0	0|0:0.065:0.936,0.063,0.001	0|0:0:1,0,0	0|0:0.072:0.929,0.069,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.922,0.075,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.944,0.056,0	0|0:0.058:0.943,0.055,0.002	0|0:0.204:0.797,0.202,0.001	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0.225:0.787,0.202,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.188:0.826,0.161,0.014	0|0:0.138:0.866,0.13,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.043:0.957,0.043,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.133:0.875,0.118,0.007	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.103:0.897,0.103,0	0|0:0:1,0,0	0|1:0.512:0.555,0.377,0.068	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.969,0.03,0.001	0|0:0.185:0.822,0.172,0.006	0|0:0.277:0.744,0.235,0.021	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.018:0.982,0.018,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.242:0.768,0.221,0.011	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.799:0.361,0.48,0.159	0|1:0.762:0.384,0.47,0.146	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.743:0.388,0.48,0.132	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.145:0.858,0.139,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.828:0.346,0.48,0.174	0|0:0.282:0.731,0.256,0.013	1|0:0.706:0.414,0.466,0.12	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.088:0.915,0.083,0.003	0|0:0.337:0.713,0.237,0.05	1|1:2:0,0,1	0|0:0.019:0.982,0.018,0	0|0:0:1,0,0	0|0:0.091:0.911,0.087,0.002	0|0:0.097:0.906,0.091,0.003	1|1:2:0,0,1	0|0:0.077:0.924,0.075,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.313:0.705,0.278,0.017	0|0:0.827:0.346,0.48,0.174	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.239:0.764,0.234,0.003	0|0:0.091:0.911,0.087,0.002	0|0:0:1,0,0	0|0:0.092:0.91,0.087,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.827:0.347,0.48,0.173	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.331:0.688,0.293,0.019	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.161:0.846,0.146,0.008	0|0:0.299:0.716,0.269,0.015	0|0:0:1,0,0	0|0:0.089:0.913,0.085,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.208:0.802,0.189,0.009	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.107:0.895,0.104,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.827:0.346,0.48,0.174	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.067:0.934,0.065,0.001	0|0:0:1,0,0	0|0:0.017:0.984,0.016,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.105:0.898,0.099,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.247:0.766,0.22,0.014	0|0:0:1,0,0	0|0:0.448:0.596,0.359,0.045	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.96,0.039,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.146:0.86,0.133,0.006	0|0:0:1,0,0	0|0:0.762:0.458,0.322,0.22	1|1:2:0,0,1	0|0:0:1,0,0
+3	18775875	SNP-3.18774634.	C	A	.	PASS	AR2=0.973;DR2=0.98;AF=0.31	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.032:0.969,0.03,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.711:0.024,0.241,0.735	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.965:0.001,0.034,0.966	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.665:0.027,0.281,0.692	1|1:1.562:0.051,0.336,0.613	1|1:2:0,0,1	1|1:1.656:0.034,0.276,0.69	1|1:1.625:0.042,0.292,0.666	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.697:0.025,0.253,0.722	1|1:2:0,0,1	1|1:1.776:0.014,0.195,0.791	0|0:0:1,0,0	1|1:1.863:0.004,0.129,0.867	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.944:0.001,0.054,0.945	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.854:0.006,0.135,0.859	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.648:0.036,0.279,0.684	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.914:0.001,0.084,0.915	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.982:0,0.018,0.982	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.766:0.013,0.208,0.779	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.881:0.009,0.102,0.889	1|1:1.665:0.017,0.3,0.682	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.853:0.005,0.137,0.858	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.21:0.227,0.336,0.437	0|0:0:1,0,0
+3	18776754	SNP-3.18775513.	A	G	.	PASS	AR2=0.948;DR2=0.962;AF=0.493	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.772:0.376,0.475,0.148	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.677:0.452,0.418,0.129	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:0.984:0.245,0.527,0.229	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.853:0.329,0.488,0.182	0|1:0.629:0.473,0.426,0.102	1|1:2:0,0,1	0|0:0.714:0.414,0.457,0.128	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.909:0.002,0.086,0.911	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.844:0.006,0.143,0.851	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.859:0.005,0.13,0.864	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.985:0,0.015,0.985	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.877:0.004,0.116,0.881	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.941:0.001,0.056,0.943	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.592:0.504,0.399,0.097	1|0:1:0,1,0	0|1:0.752:0.391,0.467,0.142	0|0:0.75:0.404,0.442,0.154	1|0:0.673:0.429,0.469,0.102	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.697:0.428,0.446,0.125	0|0:0.565:0.52,0.395,0.085	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.746:0.014,0.226,0.76	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.565:0.52,0.396,0.084	0|0:0:1,0,0	1|0:0.76:0.386,0.469,0.146	0|0:0:1,0,0	0|1:0.657:0.452,0.44,0.108	1|1:2:0,0,1	0|0:0.523:0.562,0.354,0.084	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.448:0.617,0.318,0.065	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.979:0,0.02,0.979	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.852:0.006,0.137,0.858	1|1:2:0,0,1	1|1:1.815:0.006,0.172,0.822	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	18779415	SNP-3.18778174.	C	A	.	PASS	AR2=0.964;DR2=0.972;AF=0.312	GT:DS:GP	0|0:0.034:0.967,0.033,0	1|1:1.761:0.016,0.208,0.776	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.744:0.016,0.225,0.759	1|1:1.569:0.062,0.306,0.632	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.052:0.949,0.051,0.001	0|0:0:1,0,0	0|0:0.066:0.935,0.064,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.02,0.001	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.817:0.009,0.165,0.826	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.71:0.022,0.245,0.733	1|1:1.539:0.06,0.34,0.599	1|1:1.76:0.015,0.209,0.776	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.813:0.01,0.168,0.822	1|1:1.728:0.019,0.234,0.747	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1.449:0.077,0.397,0.526	1|1:1.521:0.061,0.356,0.583	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.598:0.041,0.319,0.639	1|1:1.834:0.006,0.153,0.84	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.895:0.259,0.586,0.154	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.655:0.039,0.268,0.694	1|1:1.756:0.016,0.211,0.772	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.766:0.015,0.203,0.781	0|0:0:1,0,0	1|1:1.637:0.036,0.292,0.673	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.047:0.954,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.74:0.018,0.224,0.758	1|1:2:0,0,1	1|1:1.942:0.004,0.05,0.946	1|1:1.845:0.007,0.141,0.852	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18779525	SNP-3.18778284.	A	G	.	PASS	AR2=0.952;DR2=0.961;AF=0.323	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.7:0.31,0.68,0.01	1|1:1.719:0.016,0.25,0.734	0|0:0.021:0.979,0.021,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.61:0.055,0.279,0.666	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	1|1:1.735:0.023,0.219,0.758	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.966,0.033,0.001	0|0:0:1,0,0	1|1:1.646:0.049,0.256,0.695	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0.001:0.999,0.001,0	1|0:0.925:0.305,0.466,0.23	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.862:0.007,0.125,0.869	0|1:0.887:0.319,0.474,0.206	1|1:1.889:0.004,0.104,0.892	1|1:1.843:0.005,0.146,0.848	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.963:0,0.037,0.963	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.034:0.966,0.033,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.52:0.051,0.377,0.572	1|1:2:0,0,1	1|1:1.971:0.001,0.027,0.972	1|1:1.876:0.002,0.12,0.878	1|1:2:0,0,1	0|0:0.222:0.778,0.222,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.993:0.249,0.509,0.242	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.981:0,0.019,0.981	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|1:1.571:0.046,0.337,0.617	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.823:0.011,0.155,0.834	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.6:0.041,0.317,0.642	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.816:0.005,0.174,0.821	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:1.478:0.068,0.386,0.546	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.748:0.016,0.219,0.765	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0.03:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.95:0,0.049,0.951	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	1|1:1.882:0.002,0.113,0.885	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.029:0.971,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.321:0.106,0.466,0.427	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.043:0.957,0.042,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.967:0,0.033,0.967	1|1:1.774:0.009,0.207,0.784	0|0:0:1,0,0	1|0:1.588:0.04,0.332,0.628	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.593:0.044,0.319,0.637	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.935:0,0.065,0.935	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.961:0.001,0.037,0.962	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.965:0.001,0.033,0.966	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.035:0.268,0.428,0.303	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.577:0.045,0.333,0.622	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18779961	SNP-3.18778720.	A	G	.	PASS	AR2=0.936;DR2=0.95;AF=0.433	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.228:0.785,0.202,0.013	0|0:0.184:0.821,0.174,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.143:0.866,0.125,0.009	0|0:0.228:0.785,0.202,0.013	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.268:0.749,0.234,0.017	0|0:0.279:0.739,0.243,0.018	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.121:0.883,0.113,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.229:0.785,0.202,0.013	0|0:0.229:0.784,0.202,0.013	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.101:0.902,0.095,0.003	0|0:0.366:0.667,0.301,0.033	0|0:0.25:0.766,0.218,0.016	1|1:2:0,0,1	0|0:0.012:0.988,0.012,0	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.144:0.858,0.14,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.008:0.992,0.008,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:0.772:0.379,0.47,0.151	0|0:0.016:0.984,0.015,0	0|1:0.74:0.398,0.465,0.138	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.506:0.573,0.349,0.078	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.822:0.353,0.473,0.175	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.764:0.384,0.468,0.148	0|1:1:0,1,0	0|0:0.121:0.882,0.114,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.15:0.857,0.135,0.007	0|0:0:1,0,0	0|0:0.289:0.759,0.192,0.048	0|0:0:1,0,0	0|0:0.156:0.849,0.145,0.005	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.373:0.663,0.302,0.036	1|1:2:0,0,1	0|0:0.553:0.543,0.36,0.097	1|1:2:0,0,1	0|0:0.245:0.77,0.215,0.015	0|0:0.267:0.75,0.233,0.017	0|0:0:1,0,0	0|0:0.265:0.753,0.229,0.018	0|0:0.251:0.765,0.219,0.016	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.217:0.795,0.193,0.012	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.299:0.724,0.253,0.023	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.859:0.473,0.195,0.332	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.269:0.748,0.235,0.017	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.228:0.785,0.202,0.013	0|0:0:1,0,0	0|0:0.662:0.454,0.43,0.116	1|1:2:0,0,1	1|1:1.963:0,0.037,0.963	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.082:0.92,0.078,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.261:0.756,0.227,0.017	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.226:0.789,0.195,0.015	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.268:0.751,0.23,0.019	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.351:0.681,0.286,0.032	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.291:0.731,0.246,0.023	1|1:2:0,0,1	0|0:0.299:0.725,0.252,0.024	0|0:0.291:0.731,0.247,0.022	0|0:0:1,0,0	1|1:2:0,0,1
+3	18784095	SNP-3.18782854.	A	G	.	PASS	AR2=0.992;DR2=0.993;AF=0.286	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.988:0,0.011,0.988	1|0:1.247:0.005,0.743,0.252	0|0:0:1,0,0	1|1:1.985:0,0.014,0.985	1|1:1.987:0,0.012,0.987	0|0:0:1,0,0	1|1:1.988:0,0.011,0.988	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	1|1:1.988:0,0.012,0.988	1|1:1.988:0,0.011,0.988	1|1:1.987:0,0.012,0.988	1|1:1.987:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:1.988:0,0.011,0.988	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.653:0,0.347,0.653	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.36:0.674,0.292,0.034	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.249:0.762,0.227,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.988:0,0.011,0.988	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.011,0.988	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.829:0,0.171,0.829	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.988:0,0.011,0.988	1|1:1.987:0,0.012,0.988	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0
+3	18785749	SNP-3.18784508.	A	G	.	PASS	AR2=0.914;DR2=0.948;AF=0.313	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.56:0.519,0.402,0.079	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.56:0.519,0.402,0.079	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|1:0.575:0.508,0.409,0.083	0|0:0:1,0,0	0|0:0.514:0.558,0.37,0.072	0|0:0.56:0.519,0.402,0.079	0|0:0:1,0,0	0|0:0.56:0.519,0.402,0.079	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0.572:0.51,0.407,0.083	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.204:0.823,0.151,0.026	0|0:0.055:0.945,0.054,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.174:0.826,0.174,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.01:0.99,0.01,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.957,0.042,0.001	0|0:0:1,0,0	0|0:0.055:0.945,0.054,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.956:0,0.044,0.956	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.942,0.057,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.991,0.009,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.689:0.462,0.386,0.151	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.575:0.508,0.409,0.083	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.589:0.493,0.424,0.082	0|1:0.57:0.511,0.407,0.082	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.611:0.482,0.425,0.093	0|0:0:1,0,0	0|0:0.565:0.515,0.404,0.08	0|0:0.584:0.502,0.413,0.085	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.569:0.513,0.405,0.082	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.587:0.499,0.414,0.086	0|0:0:1,0,0	0|1:0.58:0.505,0.411,0.085	0|0:0.56:0.519,0.402,0.079	1|0:0.57:0.511,0.407,0.082	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.595:0.493,0.419,0.088	1|0:0.56:0.519,0.402,0.079	0|0:0.56:0.519,0.402,0.079	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.579:0.505,0.41,0.085	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.956,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18786421	SNP-3.18785180.	A	G	.	PASS	AR2=0.954;DR2=0.965;AF=0.337	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.335:0.005,0.655,0.34	1|1:1.593:0.054,0.3,0.647	1|1:1.882:0.008,0.103,0.889	1|1:2:0,0,1	1|1:1.839:0.002,0.156,0.842	0|0:0.011:0.989,0.011,0	1|1:2:0,0,1	1|1:1.905:0.005,0.086,0.91	0|1:1.149:0.17,0.511,0.319	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.552:0.047,0.355,0.599	1|1:1.723:0.072,0.133,0.795	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.941:0.001,0.058,0.942	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.946,0.053,0.001	0|0:0:1,0,0	0|1:0.978:0.293,0.436,0.271	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.891:0.005,0.098,0.897	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.946,0.053,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.091:0.911,0.086,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.509:0.506,0.479,0.015	1|1:2:0,0,1	0|0:0.1:0.902,0.097,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.918:0.001,0.08,0.919	1|1:1.994:0,0.006,0.994	1|1:1.864:0.001,0.135,0.864	1|1:1.605:0.027,0.341,0.632	0|0:0:1,0,0	0|0:0.502:0.546,0.406,0.048	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.046:0.222,0.51,0.268	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.427:0.077,0.419,0.504	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.466:0.075,0.383,0.542	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.282:0.098,0.522,0.38	1|1:1.562:0.044,0.35,0.606	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.801:0.019,0.161,0.82	0|0:0:1,0,0	1|0:1.238:0.155,0.452,0.393	1|1:1.578:0.054,0.315,0.632	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.982:0,0.017,0.983	1|1:2:0,0,1	1|1:1.976:0,0.023,0.976	1|1:2:0,0,1	1|1:1.979:0,0.02,0.979	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.757:0.001,0.242,0.757	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.884:0.009,0.098,0.893	1|1:1.995:0,0.005,0.995	1|1:1.944:0,0.056,0.944	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.98:0,0.02,0.98
+3	18787780	SNP-3.18786539.	A	G	.	PASS	AR2=0.899;DR2=0.925;AF=0.292	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.225:0.791,0.193,0.016	0|0:0:1,0,0	1|1:1.43:0.081,0.407,0.512	1|0:1.201:0.12,0.56,0.321	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.469:0.071,0.389,0.54	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.409:0.636,0.32,0.044	0|1:0.685:0.384,0.548,0.069	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.456:0.075,0.395,0.53	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.637:0.482,0.399,0.119	0|0:0:1,0,0	1|1:1.408:0.091,0.409,0.5	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.236:0.132,0.501,0.367	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.855:0.348,0.449,0.203	0|1:1.034:0.201,0.565,0.234	0|1:1.004:0.222,0.553,0.225	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.886:0.003,0.108,0.889	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.831:0.269,0.63,0.101	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.2:0.161,0.479,0.36	0|0:0.72:0.43,0.42,0.15	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.297:0.719,0.264,0.016	0|0:0:1,0,0	0|0:0.172:0.847,0.133,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.285:0.149,0.416,0.434	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.97,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.355:0.1,0.445,0.455	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.044:0.209,0.538,0.253	0|1:1.479:0.018,0.485,0.497	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.416:0.663,0.259,0.079	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.972:0.197,0.633,0.17	0|0:0.614:0.446,0.495,0.059	1|1:1.615:0.031,0.322,0.646	1|1:1.783:0.012,0.193,0.795	0|0:0:1,0,0	1|0:1.434:0.095,0.376,0.529	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.458:0.598,0.345,0.057	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.796:0.371,0.461,0.168	0|0:0:1,0,0	0|0:0.783:0.384,0.449,0.167	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.245:0.783,0.189,0.028	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.923:0.293,0.491,0.216	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.48:0.068,0.384,0.548	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.676:0.045,0.235,0.721	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.559:0.087,0.268,0.646	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.215:0.802,0.182,0.017	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.564:0.086,0.264,0.65	0|0:0.006:0.994,0.005,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	18788889	SNP-3.18787648.	A	G	.	PASS	AR2=0.987;DR2=0.989;AF=0.242	GT:DS:GP	1|1:1.924:0.003,0.07,0.927	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.846:0.006,0.141,0.853	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.934:0.001,0.063,0.936	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.164:0.836,0.164,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.277:0.731,0.261,0.008	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.276:0.732,0.26,0.008	0|0:0.034:0.966,0.034,0	0|0:0.019:0.981,0.019,0	0|0:0.163:0.844,0.15,0.007	0|0:0.002:0.998,0.002,0	0|0:0.252:0.762,0.223,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.863:0.005,0.126,0.868	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.074:0.927,0.072,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.946:0.001,0.051,0.948	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.91:0.002,0.086,0.912	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.887:0.005,0.104,0.892	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.849:0.007,0.138,0.856	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.848:0.004,0.144,0.852	1|1:2:0,0,1	1|1:1.878:0.005,0.112,0.883	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18789275	SNP-3.18788034.	C	A	.	PASS	AR2=0.995;DR2=0.996;AF=0.211	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.976:0,0.024,0.976	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.75:0.008,0.234,0.758	1|1:2:0,0,1	1|0:0.74:0.387,0.485,0.128	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18791188	SNP-3.18789947.	A	G	.	PASS	AR2=0.977;DR2=0.979;AF=0.234	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.931:0.001,0.066,0.933	0|0:0.035:0.965,0.035,0	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.947,0.052,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.143:0.863,0.132,0.005	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.117:0.888,0.107,0.005	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.822:0.007,0.164,0.829	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.877:0.003,0.117,0.88	1|1:2:0,0,1	0|0:0.08:0.925,0.071,0.004	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0.106:0.902,0.091,0.008	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.154:0.853,0.14,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.213:0.795,0.197,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.151:0.849,0.151,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.155:0.851,0.142,0.006	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.163:0.843,0.15,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0.073:0.928,0.07,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.954,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.905:0.01,0.075,0.915	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	0|0:0.157:0.853,0.137,0.01	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.028,0.972	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.972:0,0.027,0.972	1|1:1.885:0.002,0.111,0.887	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.933:0.287,0.494,0.22	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.974:0,0.025,0.974	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.298:0.724,0.253,0.022	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.188:0.821,0.17,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.968,0.032,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.222:0.797,0.183,0.02	0|0:0:1,0,0	1|1:1.782:0.013,0.193,0.795	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.984:0,0.015,0.984	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18791989	SNP-3.18790748.	C	A	.	PASS	AR2=0.95;DR2=0.962;AF=0.488	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.107:0.895,0.103,0.002	0|0:0:1,0,0	1|1:1.991:0,0.009,0.991	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.464:0.59,0.356,0.054	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.208:0.803,0.186,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.458:0.592,0.358,0.05	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.336:0.123,0.418,0.459	0|0:0.315:0.712,0.262,0.027	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.985:0,0.015,0.985	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.3:0.722,0.256,0.022	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.141:0.205,0.449,0.346	0|0:0:1,0,0	0|0:0.286:0.735,0.244,0.021	0|0:0:1,0,0	0|0:0.225:0.788,0.199,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.146:0.862,0.13,0.008	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.252:0.765,0.219,0.016	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.995:0.307,0.391,0.302	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.915:0.002,0.081,0.917	0|0:0.076:0.93,0.064,0.006	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	0|1:1.324:0.065,0.545,0.39	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.128:0.142,0.588,0.27	1|1:1.922:0.002,0.074,0.924	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.564:0.454,0.529,0.018	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.026,0.974	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.217:0.793,0.197,0.01	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.399:0.647,0.307,0.046	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.98:0,0.02,0.98	0|0:0:1,0,0	0|0:0.296:0.723,0.257,0.019	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.106:0.897,0.1,0.003	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.206:0.805,0.184,0.011	0|0:0:1,0,0	0|0:0.158:0.848,0.146,0.006	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.262:0.756,0.226,0.018	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.931:0.002,0.066,0.933	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.095:0.909,0.087,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.213:0.799,0.19,0.011	0|0:0.57:0.506,0.419,0.076	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.752:0.462,0.323,0.214	1|1:2:0,0,1	0|0:0.244:0.768,0.221,0.012	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.937:0.002,0.06,0.938	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.329:0.703,0.266,0.031	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.659:0,0.341,0.659	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.204:0.807,0.181,0.011	0|0:0:1,0,0	0|0:0.191:0.83,0.149,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.126:0.882,0.11,0.008	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18792338	SNP-3.18791097.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.362	GT:DS:GP	0|0:0.01:0.99,0.01,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.954,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.94:0.004,0.051,0.945	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18792424	SNP-3.18791183.	C	A	.	PASS	AR2=0.974;DR2=0.981;AF=0.505	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.87:0.003,0.124,0.873	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	1|1:1.817:0.015,0.153,0.832	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.569:0.053,0.326,0.622	1|1:2:0,0,1	0|0:0.147:0.866,0.122,0.013	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.69:0.458,0.394,0.148	1|1:2:0,0,1	0|1:1.201:0.007,0.785,0.208	0|1:0.698:0.452,0.397,0.15	1|1:1.943:0.003,0.051,0.946	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.98:0,0.019,0.981	0|0:0:1,0,0	1|1:1.944:0,0.056,0.944	0|0:0.021:0.979,0.021,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	1|1:1.931:0.001,0.067,0.932	0|1:0.696:0.454,0.396,0.15	1|0:0.987:0.199,0.615,0.186	1|1:1.891:0.003,0.103,0.894	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.078:0.006,0.909,0.085	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0,0.032,0.968	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.916:0.003,0.078,0.919	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.332:0.698,0.273,0.029	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.854:0.004,0.137,0.858	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.019,0.981	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.956:0.001,0.041,0.958	1|1:2:0,0,1	1|1:1.926:0.001,0.071,0.928	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	1|1:1.909:0.003,0.084,0.913	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.821:0,0.179,0.821	0|0:0:1,0,0	1|1:1.915:0.003,0.079,0.918	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.835:0.008,0.15,0.843	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.836:0.001,0.163,0.837	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.962:0.001,0.036,0.963	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18792649	SNP-3.18791408.	C	A	.	PASS	AR2=0.979;DR2=0.982;AF=0.485	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.886:0.003,0.108,0.889	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.198:0.806,0.19,0.004	0|0:0:1,0,0	0|0:0.418:0.625,0.331,0.043	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.31:0.71,0.269,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.092:0.912,0.083,0.004	0|0:0:1,0,0	1|1:1.855:0.009,0.127,0.864	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.861:0.009,0.121,0.87	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.897:0.003,0.096,0.9	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.891:0.002,0.105,0.893	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.886:0.001,0.111,0.887	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.928:0.001,0.069,0.929	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.817:0.011,0.16,0.829	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.901:0.003,0.094,0.903	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.782:0.013,0.193,0.794	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.881:0.001,0.117,0.882	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.903:0.003,0.092,0.906	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.945:0.001,0.053,0.946	1|1:2:0,0,1	1|1:1.928:0.002,0.069,0.929	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.122:0.884,0.111,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.129:0.877,0.117,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.148:0.854,0.144,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.872:0.004,0.119,0.876	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.815:0.014,0.156,0.829	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0.018:0.982,0.017,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.878:0.004,0.114,0.882	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.234:0.779,0.208,0.013	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.11:0.893,0.105,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.908:0.002,0.088,0.91	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.061:0.94,0.058,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.852:0.01,0.128,0.862	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.099:0.904,0.093,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.719:0.02,0.242,0.738	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.956:0.001,0.042,0.957	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18792735	SNP-3.18791494.	A	G	.	PASS	AR2=0.989;DR2=0.993;AF=0.259	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.023:0.977,0.023,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.04:0.96,0.039,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.563:0.514,0.41,0.076	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.589:0.498,0.414,0.088	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.696:0.426,0.452,0.122	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18792809	SNP-3.18791568.	C	A	.	PASS	AR2=0.986;DR2=0.989;AF=0.426	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0.025:0.975,0.025,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.172:0.842,0.143,0.014	0|0:0.053:0.948,0.05,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.932,0.067,0.001	0|0:0:1,0,0	0|0:0.292:0.743,0.222,0.035	0|0:0.25:0.766,0.218,0.016	0|0:0:1,0,0	0|0:0.105:0.897,0.102,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.966,0.033,0.002	0|0:0.13:0.886,0.098,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.467:0.586,0.36,0.053	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.043:0.958,0.042,0.001	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.04:0.961,0.039,0.001	0|0:0:1,0,0	0|0:0.032:0.969,0.03,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.05:0.951,0.048,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.028:0.973,0.027,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.194:0.82,0.167,0.013	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.147:0.86,0.134,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.054:0.947,0.051,0.001	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.032:0.968,0.031,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.97:0.001,0.028,0.971	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.03:0.971,0.029,0	0|0:0.103:0.901,0.095,0.004	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.046:0.955,0.044,0.001	0|0:0.024:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.973,0.027,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.244:0.756,0.244,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.058:0.943,0.056,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.092:0.912,0.083,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18793195	SNP-3.18791954.	C	A	.	PASS	AR2=0.976;DR2=0.986;AF=0.381	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.354:0.675,0.296,0.029	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.841:0.008,0.143,0.849	1|1:1.995:0,0.005,0.995	0|0:0.571:0.514,0.402,0.084	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.595:0.497,0.411,0.092	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.611:0.477,0.436,0.087	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.596:0.496,0.411,0.093	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.138:0.866,0.129,0.004	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.606:0.48,0.434,0.086	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.079:0.923,0.075,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.631:0.47,0.429,0.101	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18793546	SNP-3.18792305.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.346	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.957:0,0.043,0.957	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.028,0.972	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.017:0.983,0.017,0	1|1:2:0,0,1	1|1:1.971:0,0.028,0.971	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.94:0.001,0.058,0.941	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.96:0.001,0.038,0.961	1|1:2:0,0,1	1|1:1.973:0,0.026,0.973	1|1:1.969:0.001,0.03,0.969	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.949:0.001,0.049,0.95	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18798137	SNP-3.18796896.	C	A	.	PASS	AR2=0.972;DR2=0.981;AF=0.317	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.831:0.008,0.153,0.839	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.924:0,0.076,0.924	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.404:0.105,0.386,0.509	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1.394:0.107,0.391,0.502	1|1:2:0,0,1	0|0:0.217:0.803,0.177,0.02	0|0:0:1,0,0	1|1:1.973:0,0.027,0.973	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.679:0.009,0.302,0.689	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.782:0.011,0.196,0.793	1|0:1.396:0.107,0.39,0.503	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.887:0.003,0.106,0.89	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.504:0.068,0.359,0.573	1|1:2:0,0,1	1|1:1.823:0.011,0.155,0.834	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.007,0.993	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.046:0.955,0.044,0.001	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:1.831:0.009,0.152,0.84	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.201:0.222,0.356,0.423	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.929:0.004,0.062,0.933	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18798764	SNP-3.18797523.	C	A	.	PASS	AR2=0.977;DR2=0.982;AF=0.444	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0.016:0.985,0.015,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.991:0,0.009,0.991	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.234:0.78,0.205,0.015	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	1|1:1.929:0.003,0.065,0.932	1|1:2:0,0,1	1|1:1.97:0,0.03,0.97	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.746:0.395,0.464,0.141	1|1:2:0,0,1	0|0:0.395:0.66,0.286,0.054	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.434:0.625,0.315,0.059	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.091:0.911,0.087,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.104:0.899,0.098,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.242:0.791,0.176,0.033	0|0:0.157:0.844,0.154,0.002	0|0:0.239:0.787,0.187,0.026	0|0:0.105:0.898,0.099,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.23:0.783,0.203,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.97,0.03,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.929:0.001,0.07,0.93	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.019,0.981	0|0:0.164:0.838,0.159,0.003	0|0:0.044:0.957,0.041,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.078:0.924,0.074,0.002	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.973,0.027,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.211:0.802,0.186,0.013	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0.368:0.678,0.275,0.047	0|0:0.068:0.933,0.065,0.001	0|0:0.263:0.761,0.215,0.024	0|0:0.086:0.916,0.082,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.072:0.93,0.069,0.001	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.945,0.054,0.001	0|0:0:1,0,0	0|0:0.076:0.926,0.072,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.608:0.408,0.576,0.016	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18802486	SNP-3.18801245.	A	G	.	PASS	AR2=0.951;DR2=0.962;AF=0.282	GT:DS:GP	0|0:0.025:0.976,0.024,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.019:0.981,0.018,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.857:0.006,0.131,0.863	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.866:0.005,0.123,0.872	0|0:0:1,0,0	0|0:0.225:0.788,0.198,0.014	1|1:1.875:0.005,0.116,0.88	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.19:0.83,0.15,0.02	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.846:0.002,0.15,0.848	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.82:0.365,0.45,0.185	0|0:0.271:0.749,0.232,0.019	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.232:0.783,0.203,0.014	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.718:0.422,0.437,0.141	0|0:0.169:0.837,0.157,0.006	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	1|1:2:0,0,1	0|0:0.106:0.899,0.096,0.005	0|0:0.056:0.945,0.054,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.175:0.831,0.163,0.006	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.7:0.02,0.26,0.72	1|1:2:0,0,1	0|0:0.028:0.972,0.027,0.001	1|1:2:0,0,1	1|1:1.943:0.003,0.052,0.946	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.037:0.964,0.035,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.074:0.928,0.07,0.002	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	1|1:1.882:0.007,0.103,0.89	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.639:0.428,0.506,0.067	0|0:0.11:0.894,0.102,0.004	1|1:2:0,0,1	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.231:0.783,0.203,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.926,0.072,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.734:0.304,0.658,0.038	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.907:0.004,0.086,0.911	1|1:1.857:0.005,0.132,0.862	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.23:0.784,0.202,0.014	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.226:0.788,0.199,0.014	0|0:0.23:0.784,0.201,0.015	1|1:1.821:0.005,0.168,0.826	1|1:2:0,0,1	0|0:0.018:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.051:0.95,0.049,0.001	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	1|1:1.886:0.003,0.107,0.89	1|1:1.502:0.066,0.367,0.567	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.952,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:1.026:0.403,0.169,0.428	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.93:0.004,0.063,0.934	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.856:0.005,0.134,0.861	1|1:1.925:0.003,0.069,0.928	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.251:0.764,0.221,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.925,0.074,0.001	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0
+3	18805281	SNP-3.18804040.	A	G	.	PASS	AR2=0.969;DR2=0.978;AF=0.503	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.969:0,0.031,0.969	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.366:0.127,0.38,0.493	0|0:0:1,0,0	1|1:1.953:0.003,0.042,0.955	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.882:0.001,0.117,0.882	1|1:1.952:0.001,0.046,0.953	0|0:0:1,0,0	0|0:0.106:0.901,0.092,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.205:0.808,0.18,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.828:0.006,0.16,0.834	1|1:1.955:0.001,0.044,0.955	1|1:1.988:0,0.012,0.988	1|1:1.97:0,0.03,0.97	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.944:0.001,0.055,0.945	1|1:1.937:0.001,0.06,0.939	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0,0.025,0.975	0|0:0:1,0,0	1|1:1.94:0.001,0.058,0.941	1|1:2:0,0,1	1|1:1.885:0,0.115,0.885	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:1.965:0,0.034,0.966	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	1|1:1.936:0.002,0.059,0.939	0|0:0:1,0,0	1|1:1.965:0.001,0.034,0.965	1|1:1.955:0.001,0.044,0.955	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.734:0.016,0.233,0.751	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.515:0.183,0.119,0.698	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.931:0,0.069,0.931	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	1|1:1.989:0,0.01,0.99	1|1:2:0,0,1	0|0:0.393:0.632,0.343,0.025	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.764:0.014,0.207,0.778	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.35:0.158,0.334,0.508	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.973:0,0.026,0.974	1|1:1.617:0.036,0.311,0.653	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.114:0.892,0.102,0.006	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.211:0.807,0.175,0.018	1|1:2:0,0,1	0|0:0.556:0.567,0.31,0.123	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.116:0.891,0.103,0.006	1|1:2:0,0,1	0|0:0.4:0.659,0.282,0.059	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.275:0.748,0.229,0.023	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18805487	SNP-3.18804246.	A	G	.	PASS	AR2=0.971;DR2=0.977;AF=0.544	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.927:0.002,0.069,0.929	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.882:0.004,0.111,0.886	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.841:0.007,0.145,0.848	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.224:0.792,0.192,0.016	0|0:0.292:0.734,0.24,0.026	0|0:0.245:0.773,0.21,0.017	1|1:1.911:0.002,0.084,0.914	1|1:1.945:0.002,0.051,0.947	0|0:0:1,0,0	1|1:1.881:0.004,0.111,0.885	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.966:0.001,0.032,0.967	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.949:0,0.051,0.949	0|0:0:1,0,0	1|1:1.834:0.008,0.15,0.842	1|1:1.876:0.007,0.111,0.882	1|1:1.85:0.004,0.143,0.854	1|1:1.684:0.032,0.253,0.715	1|1:2:0,0,1	1|1:1.773:0.01,0.207,0.783	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.908:0.002,0.087,0.911	1|1:2:0,0,1	1|1:1.928:0.002,0.069,0.93	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.876:0.005,0.113,0.882	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.15:0.86,0.131,0.01	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.706:0.04,0.213,0.746	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.533:0.06,0.346,0.594	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.965:0,0.035,0.965	0|0:0.021:0.979,0.02,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.896:0.003,0.098,0.899	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.979:0,0.021,0.979	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.72:0.025,0.23,0.745	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.487:0.06,0.394,0.546	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.659:0.034,0.273,0.693	1|1:2:0,0,1	1|0:1.256:0.12,0.503,0.376	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.911:0.002,0.084,0.914	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.508:0.104,0.284,0.612	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.899:0.002,0.098,0.9	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.263:0.759,0.219,0.022	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	18807288	SNP-3.18806047.	C	A	.	PASS	AR2=0.97;DR2=0.978;AF=0.455	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.961,0.038,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.388:0.634,0.344,0.022	1|1:1.804:0.01,0.175,0.814	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.284:0.743,0.23,0.027	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.176:0.843,0.137,0.019	1|0:0.583:0.503,0.412,0.086	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.077:0.924,0.075,0.001	0|0:0:1,0,0	0|0:0.52:0.565,0.351,0.084	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.972,0.028,0	0|0:0.017:0.983,0.017,0	0|0:0.034:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.184:0.822,0.173,0.005	0|0:0.057:0.944,0.055,0.001	0|0:0:1,0,0	0|0:0.239:0.761,0.239,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.964,0.035,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.067:0.935,0.064,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.224:0.787,0.202,0.011	1|1:2:0,0,1	0|0:0.39:0.642,0.327,0.032	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.513:0.578,0.331,0.091	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.286:0.732,0.249,0.019	0|0:0.219:0.797,0.188,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.03:0.97,0.029,0	0|0:0.251:0.764,0.221,0.015	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.01:0.99,0.009,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.269:0.755,0.221,0.024	0|0:0.017:0.983,0.016,0	0|0:0:1,0,0	0|0:0.175:0.834,0.157,0.009	0|0:0.492:0.578,0.352,0.07	1|1:1.947:0,0.053,0.947	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.391:0.65,0.31,0.04	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.908,0.088,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.072:0.93,0.069,0.001	1|1:2:0,0,1	0|0:0.03:0.97,0.03,0
+3	18808258	SNP-3.18807017.	C	A	.	PASS	AR2=0.99;DR2=0.993;AF=0.367	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.358:0.679,0.283,0.037	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:0.859:0.335,0.472,0.193	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.965:0,0.034,0.965	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.98:0,0.019,0.981	0|0:0:1,0,0	1|1:1.976:0,0.024,0.976	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.984:0,0.015,0.984	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.964:0,0.036,0.964	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.597:0.525,0.352,0.123	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.219:0.801,0.179,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18808464	SNP-3.18807223.	C	A	.	PASS	AR2=0.978;DR2=0.979;AF=0.353	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.018:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.885:0.002,0.112,0.886	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.99,0.01,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1.006:0.257,0.48,0.263	0|0:0.888:0.311,0.489,0.199	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.847:0.337,0.478,0.184	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1.239:0.146,0.468,0.385	1|1:1.95:0.001,0.047,0.951	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.062:0.94,0.058,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.239:0.146,0.468,0.386	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:0.859:0.327,0.487,0.186	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.917:0.295,0.494,0.211	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.875:0.318,0.489,0.193	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.858:0.013,0.116,0.871	0|0:0:1,0,0
+3	18808696	SNP-3.18807455.	A	G	.	PASS	AR2=0.973;DR2=0.979;AF=0.316	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.783:0.013,0.192,0.795	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.372:0.131,0.366,0.503	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.67:0.029,0.272,0.699	0|0:0.055:0.945,0.055,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.752:0.016,0.216,0.768	1|1:2:0,0,1	0|0:0.136:0.866,0.132,0.002	1|1:1.705:0.021,0.254,0.726	1|1:2:0,0,1	0|0:0.385:0.67,0.274,0.056	0|0:0:1,0,0	1|1:1.971:0,0.029,0.971	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.924:0.002,0.072,0.926	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.302:0.129,0.441,0.43	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.244:0.777,0.202,0.021	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.673:0.029,0.269,0.702	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.716:0.023,0.237,0.74	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.972:0,0.028,0.972	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.063:0.937,0.062,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.06:0.942,0.055,0.003	0|0:0.053:0.947,0.053,0	1|1:1.681:0.028,0.264,0.708	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.728:0.022,0.228,0.75	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.68:0.028,0.264,0.708	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.722:0.021,0.237,0.743	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0:1,0,0
+3	18809082	SNP-3.18807841.	A	G	.	PASS	AR2=0.993;DR2=0.995;AF=0.245	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.97,0.029,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.492:0.561,0.385,0.053	1|1:1.699:0.011,0.279,0.71	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.09:0.913,0.084,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.847:0.006,0.14,0.854	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.929:0.004,0.062,0.934	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18812689	SNP-3.18811448.	C	A	.	PASS	AR2=0.977;DR2=0.984;AF=0.327	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.971:0,0.029,0.971	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	1|1:1.941:0,0.058,0.941	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.182:0.847,0.124,0.029	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.966,0.034,0.001	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.965,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.871:0.003,0.124,0.874	1|1:2:0,0,1	0|0:0.332:0.701,0.266,0.033	1|1:2:0,0,1	0|0:0.714:0.42,0.447,0.134	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0.021:0.979,0.021,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.93:0,0.069,0.931	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.941:0,0.058,0.942	0|0:0.02:0.981,0.019,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.899:0.004,0.093,0.903	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.894:0.005,0.095,0.9	1|1:2:0,0,1	0|0:0.969:0.409,0.214,0.378	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.859:0.002,0.137,0.861	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.624:0.564,0.248,0.188	1|1:2:0,0,1	0|0:0.067:0.934,0.065,0.001	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0.015:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.942:0.001,0.055,0.944	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.915:0.004,0.077,0.919	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.934:0,0.065,0.935	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18813873	SNP-3.18812632.	A	G	.	PASS	AR2=0.969;DR2=0.976;AF=0.547	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.962:0.001,0.037,0.962	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.804:0.009,0.177,0.814	1|1:2:0,0,1	1|1:1.964:0,0.035,0.965	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.749:0.022,0.207,0.771	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.809:0.009,0.172,0.818	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.815:0.009,0.167,0.824	1|1:2:0,0,1	1|1:1.798:0.011,0.181,0.809	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.769:0.014,0.204,0.782	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.629:0.027,0.317,0.656	0|1:1.459:0.042,0.458,0.501	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.774:0.013,0.2,0.787	1|1:2:0,0,1	1|1:1.754:0.015,0.217,0.768	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.533:0.093,0.281,0.626	1|1:1.819:0.01,0.162,0.829	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.655:0.033,0.279,0.688	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.71:0.021,0.247,0.732	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.797:0.01,0.183,0.807	1|1:1.581:0.085,0.249,0.666	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.962:0,0.037,0.962	1|1:1.917:0.002,0.079,0.919	1|1:1.977:0,0.023,0.977	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.863:0.006,0.126,0.869	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.84:0.007,0.147,0.847	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.6:0.04,0.321,0.64	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.168:0.862,0.109,0.03	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.808:0.009,0.173,0.818	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.977:0,0.022,0.978	1|1:1.967:0,0.032,0.968	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.967:0,0.033,0.967	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.766:0.014,0.206,0.78	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.796:0.011,0.183,0.807	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.953:0.001,0.044,0.955	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	18815144	SNP-3.18813903.	A	G	.	PASS	AR2=0.904;DR2=0.927;AF=0.281	GT:DS:GP	1|1:1.88:0.001,0.118,0.881	0|0:0:1,0,0	0|0:0.283:0.742,0.233,0.025	0|0:0:1,0,0	0|0:0.208:0.806,0.18,0.014	1|1:2:0,0,1	0|0:0.326:0.709,0.255,0.035	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.168:0.84,0.151,0.008	1|1:1.917:0.002,0.079,0.919	0|0:0:1,0,0	0|0:0.974:0.324,0.379,0.298	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.283:0.129,0.459,0.412	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.701:0.388,0.523,0.089	1|1:2:0,0,1	0|0:0.255:0.767,0.212,0.021	1|1:1.07:0.335,0.26,0.405	0|0:0.45:0.627,0.296,0.077	0|0:0:1,0,0	0|0:0.197:0.816,0.172,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.648:0.423,0.505,0.072	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.943:0.261,0.536,0.204	1|0:0.888:0.289,0.534,0.177	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.228:0.185,0.401,0.414	1|1:1.235:0.123,0.519,0.358	0|1:1.323:0.124,0.428,0.447	1|1:2:0,0,1	1|1:1.771:0.008,0.212,0.779	1|1:1.542:0.008,0.442,0.55	1|1:2:0,0,1	1|1:1.859:0.005,0.13,0.864	1|1:1.973:0,0.026,0.974	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.845:0.006,0.143,0.851	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.954:0.001,0.045,0.955	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.902:0.004,0.09,0.906	1|1:2:0,0,1	0|0:0.192:0.823,0.163,0.014	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.782:0.02,0.178,0.802	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.885:0.003,0.109,0.888	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.908:0.002,0.088,0.91	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.063:0.244,0.448,0.308	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.537:0.101,0.262,0.638	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.374:0.659,0.308,0.033	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.162:0.844,0.149,0.007	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.108:0.895,0.101,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.208:0.806,0.18,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.416:0.619,0.346,0.035	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.042:0.252,0.454,0.294	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.331:0.704,0.261,0.035	0|1:1.095:0.226,0.453,0.321	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.502:0.074,0.35,0.576	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.934:0.001,0.064,0.935	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.11:0.894,0.102,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.195:0.816,0.173,0.011	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.147:0.861,0.131,0.008	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.509:0.566,0.358,0.075	1|1:1.442:0.133,0.292,0.575	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.59:0.104,0.203,0.693	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.146:0.862,0.129,0.008	1|1:1.914:0.002,0.082,0.916	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	18817425	SNP-3.18816184.	A	G	.	PASS	AR2=0.936;DR2=0.953;AF=0.325	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.109:0.895,0.1,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.899:0.393,0.315,0.292	1|0:1.503:0.063,0.37,0.566	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.601:0.466,0.467,0.067	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.096:0.907,0.09,0.003	0|0:0:1,0,0	0|0:0.451:0.604,0.341,0.055	0|0:0.51:0.524,0.442,0.034	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.077:0.145,0.633,0.222	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.499:0.072,0.358,0.571	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.964:0.001,0.035,0.965	1|1:2:0,0,1	1|1:1.827:0.01,0.154,0.836	1|1:1.779:0.012,0.197,0.791	1|1:1.837:0.009,0.145,0.846	1|1:2:0,0,1	1|1:1.801:0.01,0.179,0.811	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.786:0.014,0.186,0.8	1|1:2:0,0,1	1|1:1.702:0,0.298,0.702	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.772:0.013,0.203,0.785	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.77:0.016,0.198,0.786	0|0:0:1,0,0	0|0:0.083:0.919,0.079,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.732:0.018,0.232,0.75	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.729:0.019,0.233,0.748	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.654:0.052,0.243,0.705	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.912:0.003,0.082,0.915	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.234:0.78,0.207,0.014	0|0:0:1,0,0	0|0:0.065:0.937,0.061,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.775:0.013,0.2,0.787	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.089:0.914,0.084,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.019,0.001	1|1:1.8:0.013,0.174,0.813	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.921:0.001,0.077,0.922	0|0:0:1,0,0	0|1:0.566:0.499,0.437,0.064	0|0:0:1,0,0	1|1:1.575:0.036,0.352,0.611	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.021:0.979,0.021,0	1|0:0.665:0.461,0.413,0.126	0|0:0.896:0.3,0.504,0.196	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.838:0.321,0.52,0.159	1|1:2:0,0,1	1|1:1.11:0.185,0.52,0.295	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.836:0.009,0.147,0.844	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.398:0.114,0.374,0.512	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.236:0.765,0.235,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0.043:0.957,0.043,0	0|0:0:1,0,0	1|1:1.79:0.011,0.188,0.801
+3	18826402	SNP-3.18825161.	A	G	.	PASS	AR2=0.885;DR2=0.922;AF=0.235	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.672:0.443,0.442,0.115	0|0:0:1,0,0	1|0:0.569:0.514,0.404,0.082	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.489:0.589,0.333,0.078	0|0:0.467:0.588,0.357,0.055	1|1:1.457:0.075,0.393,0.532	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.352:0.682,0.284,0.034	1|0:0.679:0.437,0.447,0.116	0|0:0.195:0.833,0.138,0.028	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.839:0.382,0.397,0.221	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.474:0.583,0.361,0.056	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.62:0.472,0.435,0.093	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.81:0.389,0.412,0.199	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.486:0.581,0.351,0.067	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.439:0.078,0.405,0.517	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.195:0.825,0.156,0.019	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.294:0.128,0.451,0.421	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.45:0.073,0.403,0.523	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.183:0.845,0.127,0.028	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.327:0.138,0.398,0.464	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.83:0.348,0.475,0.177	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.413:0.107,0.372,0.521	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.077:0.925,0.072,0.003	0|0:0.479:0.578,0.364,0.058	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.425:0.089,0.397,0.514	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.122:0.882,0.114,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.066:0.936,0.063,0.002	0|0:0:1,0,0	1|1:1.909:0.005,0.081,0.914	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.906:0.001,0.092,0.907	0|0:0:1,0,0	0|0:0.609:0.477,0.438,0.086	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.133:0.872,0.124,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.363:0.087,0.463,0.45	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.084:0.918,0.079,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.268:0.167,0.398,0.435	0|0:0:1,0,0	0|0:0.125:0.88,0.115,0.005	0|0:0.506:0.559,0.377,0.064	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.406:0.652,0.291,0.057	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.363:0.105,0.427,0.468	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|1:1.458:0.093,0.355,0.552	0|0:0:1,0,0	1|1:1.128:0.215,0.442,0.343
+3	18828845	SNP-3.18827604.	C	A	.	PASS	AR2=0.939;DR2=0.954;AF=0.388	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.423:0.622,0.333,0.045	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.193:0.807,0.193,0	1|0:0.579:0.503,0.414,0.083	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.162:0.846,0.146,0.008	0|0:0.303:0.72,0.257,0.023	0|0:0:1,0,0	0|0:0.564:0.572,0.291,0.137	0|0:0.146:0.859,0.136,0.005	1|1:2:0,0,1	0|0:0.378:0.662,0.298,0.04	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.264:0.75,0.236,0.014	0|0:0:1,0,0	0|0:0.248:0.769,0.214,0.017	0|0:0.408:0.634,0.324,0.042	0|0:0:1,0,0	0|0:0.521:0.544,0.39,0.066	0|1:1:0,1,0	0|0:0.292:0.734,0.239,0.027	0|0:0.376:0.66,0.304,0.036	0|0:0:1,0,0	0|0:0.091:0.911,0.087,0.002	0|0:0:1,0,0	0|0:0.123:0.882,0.112,0.005	0|0:0.244:0.77,0.217,0.014	0|0:0.134:0.869,0.128,0.003	0|0:0:1,0,0	0|0:0.181:0.822,0.176,0.002	0|0:0:1,0,0	0|0:0.062:0.939,0.059,0.002	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0.062:0.939,0.06,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.969,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.932,0.066,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.639:0.033,0.296,0.672	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.569:0.047,0.336,0.617	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.065:0.936,0.063,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.251:0.76,0.229,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.161:0.848,0.143,0.009	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0.195:0.816,0.173,0.011	0|0:0.111:0.892,0.104,0.003	0|0:0.268:0.75,0.232,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.818:0.316,0.549,0.135	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.063:0.938,0.061,0.001	1|1:2:0,0,1	0|0:0.603:0.488,0.421,0.091	0|0:0.387:0.651,0.311,0.038	1|1:2:0,0,1	0|1:0.375:0.661,0.304,0.035	0|0:0.089:0.914,0.084,0.003	0|0:0.422:0.623,0.332,0.045	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.108:0.895,0.101,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.57:0.508,0.414,0.078	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.157:0.85,0.144,0.006	0|0:0:1,0,0	0|0:0.038:0.963,0.037,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.427:0.621,0.331,0.048	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.697:0.43,0.442,0.128	1|1:2:0,0,1	0|0:0.311:0.713,0.262,0.024	0|0:0.154:0.855,0.137,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.97,0.03,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.085:0.915,0.085,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.039:0.962,0.037,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18829038	SNP-3.18827797.	C	A	.	PASS	AR2=0.906;DR2=0.928;AF=0.212	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.235:0.779,0.207,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.648:0.46,0.433,0.107	0|0:0.166:0.843,0.149,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.351:0.687,0.275,0.038	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.361:0.679,0.281,0.04	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.362:0.659,0.32,0.021	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.327:0.703,0.266,0.031	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.214:0.802,0.182,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.166:0.201,0.432,0.367	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.638:0.467,0.428,0.105	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.297:0.046,0.612,0.343	0|0:0:1,0,0	0|0:0.564:0.497,0.441,0.062	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.304:0.725,0.245,0.03	0|0:0:1,0,0	0|0:0.339:0.693,0.274,0.032	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.174:0.838,0.15,0.012	1|1:2:0,0,1	0|0:0.357:0.674,0.295,0.031	0|0:0.171:0.832,0.165,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.617:0.476,0.43,0.094	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.062:0.939,0.061,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.344:0.689,0.277,0.033	0|0:0:1,0,0	0|0:0.298:0.726,0.251,0.023	0|0:0.279:0.74,0.24,0.02	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.122:0.194,0.49,0.316	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.294:0.727,0.252,0.021	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0.17:0.841,0.147,0.011	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.86:0.321,0.497,0.182	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.964,0.036,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.951,0.048,0.001	0|0:0.457:0.599,0.345,0.056	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.064:0.937,0.063,0.001	0|0:0.148:0.859,0.135,0.006	0|0:0:1,0,0	1|0:0.895:0.267,0.571,0.162	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.069:0.931,0.068,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.707:0.422,0.449,0.129	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.726:0.398,0.478,0.124	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.296:0.727,0.25,0.023	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.163:0.846,0.146,0.009	0|0:0.224:0.792,0.192,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.361:0.679,0.281,0.04	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.146:0.861,0.132,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.939,0.059,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.296:0.727,0.25,0.023	1|1:2:0,0,1	0|0:0.03:0.97,0.029,0	0|0:0.046:0.955,0.043,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.384:0.659,0.297,0.044
+3	18834871	SNP-3.18833630.	C	A	.	PASS	AR2=0.993;DR2=0.994;AF=0.323	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.33:0.702,0.265,0.033	1|1:2:0,0,1	0|0:0.724:0.412,0.451,0.137	0|0:0:1,0,0	1|1:1.989:0,0.011,0.989	0|0:0.008:0.992,0.008,0	0|0:0.022:0.978,0.021,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.972:0,0.028,0.972	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.978:0,0.021,0.978	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.808:0.381,0.43,0.189	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18834928	SNP-3.18833687.	A	G	.	PASS	AR2=0.947;DR2=0.959;AF=0.278	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.686:0.432,0.45,0.118	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.543:0.531,0.395,0.074	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.547:0.537,0.379,0.084	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.215:0.792,0.2,0.007	0|0:0.405:0.642,0.311,0.047	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.75:0.393,0.464,0.143	0|1:0.876:0.314,0.496,0.19	0|0:0.125:0.879,0.117,0.004	0|0:0.064:0.938,0.061,0.001	0|0:0.155:0.854,0.137,0.009	0|0:0.406:0.627,0.341,0.032	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.334:0.035,0.596,0.369	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.429:0.001,0.57,0.43	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:1.69:0.014,0.283,0.703	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.943,0.056,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.952,0.046,0.002	0|0:0.074:0.928,0.07,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.932,0.066,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.038:0.963,0.036,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.306:0.737,0.22,0.043	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.29:0.744,0.223,0.033	0|0:0:1,0,0	0|0:0.466:0.588,0.358,0.054	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.763:0.383,0.47,0.146	0|0:0.026:0.974,0.026,0	0|0:0.744:0.396,0.463,0.141	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.946,0.053,0.001	0|0:0.089:0.915,0.081,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.064:0.937,0.062,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.963,0.036,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.796:0.369,0.466,0.165	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.599:0.491,0.419,0.09	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.963,0.036,0.001	1|0:0.911:0.301,0.487,0.212	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18835579	SNP-3.18834338.	A	G	.	PASS	AR2=0.868;DR2=0.883;AF=0.448	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.939:0.278,0.506,0.216	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.013:0.987,0.013,0	0|1:0.901:0.301,0.497,0.202	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:0.962:0.264,0.509,0.227	0|0:0:1,0,0	1|0:0.872:0.319,0.489,0.191	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.012:0.247,0.493,0.259	1|1:2:0,0,1	0|0:0.914:0.297,0.493,0.21	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:0.86:0.326,0.488,0.186	0|0:0.701:0.442,0.416,0.143	0|0:0.861:0.326,0.488,0.187	0|1:0.885:0.312,0.492,0.196	1|0:1:0,1,0	0|0:0.699:0.455,0.392,0.153	0|0:0.963:0.274,0.488,0.237	1|0:0.945:0.278,0.5,0.222	1|0:1.114:0.186,0.514,0.3	0|1:1.154:0.182,0.482,0.336	0|1:1.535:0.009,0.446,0.544	0|0:0.1:0.9,0.099,0	0|0:0.488:0.529,0.454,0.017	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0.445:0.563,0.429,0.008	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.895:0.003,0.099,0.898	1|1:2:0,0,1	1|1:1.915:0.002,0.08,0.918	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.026:0.974,0.026,0	1|1:2:0,0,1	1|1:1.813:0.005,0.178,0.818	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.859:0.327,0.488,0.185	1|1:1.857:0.003,0.136,0.86	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.336:0.1,0.465,0.436	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.769:0.018,0.195,0.787	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.915:0.002,0.08,0.918	0|1:1.191:0.151,0.507,0.342	1|1:2:0,0,1	1|0:1.273:0.137,0.453,0.41	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.991:0.25,0.508,0.242	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.875:0.318,0.49,0.193	0|0:0.874:0.319,0.489,0.193	1|0:0.84:0.338,0.484,0.178	0|1:0.86:0.326,0.488,0.186	0|1:1.115:0.19,0.505,0.305	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.862:0.325,0.488,0.187	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.864:0.324,0.488,0.188	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.636:0.49,0.385,0.125	0|1:1:0,1,0	0|0:0.863:0.325,0.488,0.187	1|0:0.863:0.325,0.488,0.187	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.95:0.001,0.047,0.952	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.27:0.138,0.454,0.408	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.915:0.002,0.08,0.918	1|1:2:0,0,1	1|0:0.915:0.292,0.5,0.208	1|0:1.013:0.252,0.484,0.265	0|0:0.995:0.26,0.485,0.255	1|0:1.293:0.131,0.445,0.424	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.773:0.018,0.191,0.791	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.863:0.325,0.488,0.187	0|0:0:1,0,0	1|0:0.86:0.326,0.488,0.186	0|1:0.738:0.412,0.438,0.15	0|0:0.863:0.324,0.488,0.187	1|1:2:0,0,1	1|0:0.858:0.327,0.488,0.185	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.859:0.327,0.488,0.186	0|0:0.863:0.324,0.488,0.187	0|1:0.855:0.329,0.487,0.184	1|0:0.864:0.324,0.488,0.188	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.013:0.987,0.013,0	0|0:0.013:0.988,0.012,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.143:0.875,0.106,0.018	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.012:0.988,0.012,0	1|1:2:0,0,1	0|0:0.261:0.743,0.254,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.859:0.327,0.488,0.185	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.192:0.841,0.126,0.033	1|1:1.915:0.002,0.081,0.917	0|0:0.006:0.994,0.006,0	0|0:0.046:0.955,0.045,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18852669	SNP-3.18851428.	A	G	.	PASS	AR2=0.899;DR2=0.915;AF=0.317	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:1.052:0.224,0.499,0.276	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.26:0.157,0.426,0.417	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.044:0.23,0.497,0.274	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.347:0.682,0.289,0.029	1|0:1.064:0.244,0.447,0.309	0|1:0.957:0.285,0.472,0.242	0|0:0.197:0.821,0.16,0.019	1|1:2:0,0,1	0|1:1.07:0.217,0.496,0.287	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.958:0.293,0.457,0.251	1|0:1.019:0.233,0.515,0.252	1|1:2:0,0,1	0|1:0.697:0.368,0.568,0.064	0|0:0:1,0,0	0|1:1.011:0.225,0.538,0.236	0|0:0.034:0.966,0.034,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.051:0.951,0.048,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.482:0.084,0.35,0.566	1|0:1.157:0.175,0.493,0.332	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.396:0.096,0.412,0.492	1|1:2:0,0,1	0|0:0.073:0.93,0.068,0.003	1|1:2:0,0,1	0|0:0.05:0.951,0.047,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.082:0.922,0.075,0.003	1|1:2:0,0,1	1|1:1.89:0.003,0.105,0.893	1|1:2:0,0,1	1|1:1.458:0.063,0.416,0.521	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.13:0.872,0.126,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.839:0.015,0.13,0.854	1|1:1.537:0.034,0.396,0.571	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.536:0.056,0.352,0.592	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.67:0.032,0.265,0.703	0|0:0:1,0,0	0|1:1.268:0.14,0.453,0.407	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.436:0.092,0.381,0.528	1|1:2:0,0,1	0|0:0.05:0.951,0.047,0.002	0|0:0.569:0.502,0.428,0.07	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|1:1.171:0.191,0.446,0.362	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.969:0.275,0.48,0.245	0|0:1.018:0.241,0.499,0.259	0|0:1.06:0.222,0.497,0.282	1|1:2:0,0,1	1|0:0.701:0.436,0.427,0.137	0|0:0.05:0.951,0.047,0.002	0|0:0.035:0.965,0.035,0	1|1:1.863:0.007,0.123,0.87	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.092:0.207,0.494,0.299	0|0:0.006:0.994,0.006,0	1|0:1.052:0.226,0.497,0.278	0|0:0:1,0,0	1|0:0.682:0.319,0.681,0.001	1|0:1.079:0.213,0.496,0.291	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.19:0.81,0.19,0	0|0:0.074:0.927,0.073,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.05:0.951,0.047,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.214:0.159,0.469,0.373	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.053:0.225,0.496,0.278	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.051:0.226,0.496,0.277	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.959:0.285,0.472,0.243	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0.004:0.996,0.004,0	0|0:0.016:0.985,0.015,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.089:0.911,0.089,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.051:0.226,0.496,0.277	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18855626	SNP-3.18854385.	C	A	.	PASS	AR2=1;DR2=1;AF=0.352	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:1.999:0,0.001,0.999	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.998:0.002,0.998,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18863952	SNP-3.18862711.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.202	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.818:0.01,0.162,0.828	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18865056	SNP-3.18863815.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.362	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.94,0.059,0.001	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.962,0.038,0	0|0:0:1,0,0	0|0:0.073:0.928,0.07,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.024:0.976,0.023,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.953,0.046,0.001	0|0:0:1,0,0	1|0:0.95:0.066,0.917,0.017	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.954,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18865076	SNP-3.18863835.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.23	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.982:0.041,0.935,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.179:0.821,0.178,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.029:0.971,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18865095	SNP-3.18863854.	A	G	.	PASS	AR2=0.98;DR2=0.984;AF=0.443	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.672:0.027,0.273,0.699	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.317:0.083,0.517,0.4	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.773:0.014,0.199,0.787	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.872:0.009,0.109,0.881	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.743:0.016,0.224,0.759	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.354:0.647,0.353,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.705:0.022,0.252,0.726	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.648:0.032,0.289,0.679	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1.688:0.025,0.263,0.712	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.99:0.13,0.75,0.12	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.771:0.011,0.206,0.783	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.69:0.024,0.261,0.714	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.756:0.019,0.207,0.774	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.697:0.023,0.257,0.72	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	18865748	SNP-3.18864507.	C	A	.	PASS	AR2=0.988;DR2=0.991;AF=0.307	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.964:0.001,0.035,0.965	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.285:0.741,0.233,0.026	1|1:1.983:0,0.017,0.983	0|0:0.669:0.452,0.426,0.122	0|0:0:1,0,0	1|1:1.867:0,0.133,0.867	0|0:0.007:0.993,0.007,0	0|0:0.02:0.98,0.02,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:1.993:0,0.007,0.993	1|1:1.867:0.009,0.115,0.876	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.942:0.002,0.054,0.944	0|0:0:1,0,0	1|1:1.957:0,0.043,0.957	0|0:0.004:0.996,0.004,0	1|1:1.614:0.032,0.323,0.646	1|1:1.983:0,0.017,0.983	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.85:0.001,0.148,0.851	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.982:0,0.017,0.982	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:1.935:0.002,0.061,0.937	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.841:0.005,0.149,0.846	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.97:0.001,0.029,0.97	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.973:0,0.026,0.974	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.027,0.973	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18866029	SNP-3.18864788.	C	A	.	PASS	AR2=0.997;DR2=0.997;AF=0.352	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.976:0,0.023,0.977	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.288:0.712,0.288,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.018,0.982	1|1:2:0,0,1	1|1:1.971:0,0.028,0.971	1|1:1.982:0,0.017,0.982	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:1.963:0,0.036,0.963	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:1.946:0.001,0.053,0.947	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.977:0,0.023,0.977	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.117:0.887,0.108,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.965:0.001,0.034,0.965	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18866047	SNP-3.18864806.	C	A	.	PASS	AR2=0.968;DR2=0.972;AF=0.434	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.908:0.109,0.875,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:1.373:0.096,0.435,0.469	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.268:0.134,0.463,0.402	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.179:0.154,0.513,0.333	0|1:0.653:0.35,0.648,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.176:0.174,0.475,0.35	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1.179:0.173,0.474,0.352	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.179:0.173,0.474,0.352	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:0.963:0.059,0.919,0.022	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.176:0.174,0.475,0.35	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.176:0.174,0.475,0.35	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.179:0.173,0.474,0.352	1|0:1.214:0.181,0.424,0.395	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.964:0.057,0.921,0.022	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.982:0.056,0.905,0.038	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.298:0.124,0.454,0.422	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.176:0.174,0.475,0.35	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18866067	SNP-3.18864826.	C	A	.	PASS	AR2=0.995;DR2=0.996;AF=0.383	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0.054,0.891,0.054	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0.031:0.969,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.765:0.241,0.753,0.006	0|0:0:1,0,0	0|0:0.269:0.734,0.262,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.053:0.947,0.052,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.607:0.393,0.607,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.017,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.023,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18866089	SNP-3.18864848.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.392	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.955:0,0.045,0.955	1|1:1.994:0,0.006,0.994	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.028,0.972	1|1:1.952:0.001,0.047,0.952	1|1:1.968:0,0.031,0.969	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.953:0.001,0.046,0.954	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.957:0.001,0.041,0.958	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.95:0.001,0.049,0.951	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.922:0.002,0.074,0.924	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18866323	SNP-3.18865082.	C	A	.	PASS	AR2=0.992;DR2=0.994;AF=0.4	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.444:0.566,0.424,0.01	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.96,0.039,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.142:0.859,0.14,0.001	0|0:0:1,0,0	0|0:0.224:0.778,0.22,0.002	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.965,0.034,0	0|0:0:1,0,0	0|0:0.13:0.882,0.107,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.035:0.965,0.035,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.059:0.942,0.058,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.194:0.81,0.187,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.089:0.913,0.084,0.002	1|1:2:0,0,1	0|0:0.042:0.959,0.04,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.195:0.807,0.191,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.957,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18868242	SNP-3.18867001.	C	A	.	PASS	AR2=0.988;DR2=0.992;AF=0.341	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.441:0.08,0.4,0.521	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.426:0.084,0.405,0.511	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.685:0.037,0.241,0.722	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.717:0.019,0.245,0.736	1|1:1.862:0.004,0.13,0.866	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.785:0.009,0.196,0.795	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.152:0.848,0.152,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	18868282	SNP-3.18867041.	A	G	.	PASS	AR2=1;DR2=1;AF=0.241	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1.076:0.001,0.923,0.077	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18868406	SNP-3.18867165.	C	A	.	PASS	AR2=0.978;DR2=0.981;AF=0.362	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.914:0.004,0.078,0.918	1|1:1.849:0.007,0.136,0.856	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.166:0.839,0.156,0.005	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.962,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.074:0.928,0.071,0.001	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.951,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.93,0.069,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.278:0.742,0.238,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.05:0.951,0.048,0.001	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0.033:0.967,0.032,0	0|0:0.076:0.925,0.075,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.842:0.002,0.154,0.844	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.926:0.003,0.068,0.929	1|1:1.995:0,0.005,0.995	1|1:1.891:0.001,0.107,0.892	1|1:1.972:0,0.028,0.972	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.93:0.003,0.064,0.933	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.062:0.939,0.06,0.001	1|1:1.913:0.004,0.08,0.916	1|1:1.807:0.013,0.168,0.819	1|1:1.985:0,0.015,0.985	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.932:0.001,0.066,0.933	1|1:1.822:0.009,0.161,0.831	1|1:1.919:0.001,0.078,0.921	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.911:0.004,0.08,0.915	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.927:0.003,0.066,0.93	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.951:0.001,0.046,0.953	1|1:1.878:0.005,0.113,0.882	1|1:1.95:0.002,0.046,0.952	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.728:0.032,0.207,0.761	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.278:0.742,0.238,0.02	0|0:0.224:0.776,0.223,0.001	0|0:0:1,0,0	0|0:0.172:0.834,0.159,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.051:0.95,0.049,0.001	1|1:2:0,0,1	0|0:0.076:0.925,0.073,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.975,0.025,0	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.906:0.003,0.087,0.909	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.015,0	0|0:0.064:0.938,0.059,0.002	0|0:0.074:0.927,0.071,0.002	0|0:0.076:0.925,0.074,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.844:0.001,0.155,0.845	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	1|1:1.934:0.003,0.06,0.937	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.028,0.972	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.984:0,0.016,0.984	1|1:1.936:0.003,0.058,0.939	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.279:0.741,0.239,0.02	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18869491	SNP-3.18868250.	C	A	.	PASS	AR2=0.953;DR2=0.964;AF=0.404	GT:DS:GP	0|0:0.163:0.844,0.148,0.008	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.884:0.003,0.109,0.887	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0.146:0.856,0.141,0.003	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.041:0.96,0.039,0.001	0|1:0.977:0.059,0.905,0.036	0|0:0.451:0.567,0.415,0.018	0|0:0.173:0.835,0.158,0.008	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.967,0.032,0.001	0|0:0.341:0.73,0.199,0.071	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.44:0.61,0.34,0.05	1|1:2:0,0,1	1|0:0.706:0.426,0.442,0.132	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.173:0.835,0.158,0.008	0|0:0:1,0,0	0|0:0.173:0.834,0.158,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.187:0.823,0.168,0.009	0|0:0:1,0,0	0|0:0.179:0.831,0.159,0.01	0|0:0:1,0,0	0|0:0.255:0.746,0.254,0.001	0|0:0.176:0.833,0.159,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.665:0.022,0.29,0.687	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.451:0.048,0.452,0.499	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.788:0.012,0.187,0.8	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.911:0.002,0.086,0.913	1|1:1.598:0.049,0.304,0.647	1|1:2:0,0,1	1|1:1.854:0.005,0.136,0.859	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.793:0.012,0.184,0.804	1|1:2:0,0,1	0|0:0.47:0.591,0.349,0.06	1|1:2:0,0,1	1|1:1.944:0.001,0.054,0.945	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.183:0.825,0.166,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.177:0.831,0.161,0.008	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.951:0.001,0.047,0.952	1|0:0.991:0.049,0.911,0.04	0|0:0:1,0,0	0|0:0.143:0.863,0.131,0.006	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.147:0.86,0.133,0.007	0|1:1:0,1,0	0|0:0.066:0.935,0.063,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.974:0,0.026,0.974	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.13:0.876,0.118,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.177:0.831,0.161,0.008	1|1:2:0,0,1	1|1:1.962:0,0.037,0.963	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.493:0.529,0.449,0.022	1|1:1.912:0.002,0.084,0.914	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.168:0.84,0.153,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.611:0.491,0.407,0.102	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.173:0.835,0.158,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.127:0.875,0.124,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.136:0.87,0.125,0.006
+3	18869854	SNP-3.18868613.	C	A	.	PASS	AR2=0.925;DR2=0.95;AF=0.415	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.152:0.853,0.143,0.005	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.02:0.05,0.879,0.071	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.127:0.875,0.124,0.002	0|0:0:1,0,0	0|0:0.548:0.458,0.536,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.923:0.084,0.909,0.007	0|1:0.515:0.55,0.385,0.065	0|0:0.29:0.726,0.259,0.015	1|1:2:0,0,1	0|0:0.075:0.926,0.074,0.001	0|0:0.498:0.562,0.378,0.06	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.176:0.824,0.176,0	0|0:0.361:0.64,0.359,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.705:0.404,0.487,0.109	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.202:0.798,0.202,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.158:0.855,0.133,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.757:0.008,0.227,0.765	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.516:0.021,0.442,0.537	1|1:2:0,0,1	1|1:1.983:0,0.016,0.983	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.692:0,0.308,0.692	1|0:1.171:0.162,0.506,0.332	1|1:1.911:0.003,0.083,0.914	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.805:0.317,0.56,0.122	1|1:2:0,0,1	0|0:0.086:0.917,0.081,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.681:0.03,0.258,0.711	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.905:0.003,0.09,0.908	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.168:0.246,0.34,0.414	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.301:0.709,0.281,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.943:0.057,0.943,0	0|0:0.042:0.96,0.039,0.001	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1.093:0.02,0.867,0.113	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.548:0.106,0.24,0.654	0|0:0:1,0,0	1|0:1.099:0.002,0.897,0.101	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.002:0.048,0.902,0.05	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.524:0.519,0.438,0.043	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.691:0.309,0.691,0	0|1:1:0,1,0	1|0:0.632:0.368,0.632,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.96,0.039,0.001	0|0:0:1,0,0	1|0:0.504:0.56,0.375,0.065	1|0:0.584:0.507,0.401,0.092	0|0:0.588:0.505,0.402,0.093	0|0:0:1,0,0	1|0:0.56:0.522,0.396,0.082	0|0:0:1,0,0	1|0:0.586:0.506,0.402,0.092	0|1:0.587:0.506,0.402,0.092	0|0:0.485:0.581,0.352,0.067	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.585:0.507,0.401,0.092	0|0:0:1,0,0	0|0:0.588:0.49,0.432,0.078	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18869855	SNP-3.18868614.	C	A	.	PASS	AR2=0.98;DR2=0.985;AF=0.456	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.486:0.521,0.472,0.007	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.067:0.031,0.871,0.098	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.172:0.837,0.154,0.009	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0.369:0.646,0.339,0.015	1|0:1:0,1,0	0|0:0.43:0.651,0.267,0.081	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.055:0.946,0.053,0.001	0|0:0.188:0.822,0.169,0.009	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.231:0.774,0.22,0.006	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:0.711:0.416,0.457,0.127	0|0:0.715:0.413,0.459,0.128	0|0:0:1,0,0	0|0:0.711:0.416,0.458,0.127	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.17:0.843,0.144,0.013	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18870770	SNP-3.18869529.	C	A	.	PASS	AR2=0.997;DR2=0.997;AF=0.351	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.855:0,0.144,0.855	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.873:0.005,0.118,0.877	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.84:0.007,0.147,0.846	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.913:0.002,0.082,0.916	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.839:0.008,0.145,0.847	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18870916	SNP-3.18869675.	C	A	.	PASS	AR2=0.992;DR2=0.994;AF=0.339	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.821:0.002,0.176,0.823	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.731:0.019,0.231,0.75	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.635:0.038,0.29,0.672	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.368:0.632,0.368,0	1|1:2:0,0,1	1|1:1.977:0,0.022,0.977	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.795:0.011,0.182,0.807	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.79:0.013,0.183,0.804	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18870952	SNP-3.18869711.	C	A	.	PASS	AR2=0.97;DR2=0.977;AF=0.404	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.391:0.617,0.375,0.008	1|0:1.46:0.022,0.497,0.482	0|0:0:1,0,0	0|0:0.625:0.421,0.533,0.046	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.109:0.894,0.103,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.298:0.725,0.252,0.023	0|0:0:1,0,0	0|0:0.479:0.579,0.362,0.059	0|0:0.112:0.888,0.111,0	0|0:0.039:0.962,0.037,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.401:0.608,0.384,0.009	0|0:0.1:0.906,0.088,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.951,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.937,0.062,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.138:0.867,0.127,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.196:0.812,0.18,0.008	0|0:0:1,0,0	0|0:0.139:0.864,0.132,0.004	0|0:0.128:0.878,0.117,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.24:0.771,0.217,0.011	0|0:0.277:0.753,0.218,0.03	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.072:0.93,0.068,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.632:0.038,0.292,0.67	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.911:0.002,0.084,0.914	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.081:0.921,0.077,0.002	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.128:0.878,0.117,0.005	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.95,0.049,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|1:0.707:0.393,0.506,0.101	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.906,0.09,0.004	0|0:0.065:0.935,0.065,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.098:0.905,0.092,0.003	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.933,0.065,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.404:0.637,0.321,0.042	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.001:0.999,0.001,0	0|0:0.001:0.999,0.001,0	0|0:0.096:0.907,0.091,0.003	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.933,0.067,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.035:0.966,0.033,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.067:0.935,0.063,0.002
+3	18871142	SNP-3.18869901.	C	A	.	PASS	AR2=0.997;DR2=0.998;AF=0.358	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.053:0.947,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.982,0.018,0	0|0:0:1,0,0	0|0:0.041:0.959,0.04,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.066:0.935,0.063,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.728:0,0.272,0.728	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.033:0.968,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.104:0.898,0.1,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18872231	SNP-3.18870990at.	A	G	.	PASS	AR2=0.992;DR2=0.992;AF=0.519	GT:DS:GP	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.893:0.003,0.102,0.896	1|1:1.957:0,0.042,0.958	1|1:1.896:0.004,0.097,0.899	1|1:2:0,0,1	1|1:1.933:0.001,0.064,0.935	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.899:0.003,0.096,0.901	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.938:0.001,0.06,0.939	1|1:1.813:0.003,0.18,0.817	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.124:0.876,0.124,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.142:0.859,0.139,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.13:0.87,0.129,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.933:0.002,0.063,0.935	1|1:1.927:0.003,0.067,0.93	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.934:0.002,0.063,0.936	1|1:1.952:0.001,0.047,0.952	1|1:2:0,0,1	1|1:1.933:0.001,0.065,0.934	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.886:0.005,0.105,0.89	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.904:0.002,0.092,0.906	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.914:0.002,0.082,0.916	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.909:0.002,0.087,0.911	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.96:0.001,0.038,0.961	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.918:0.002,0.078,0.92	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	18872231	SNP-3.18870990ac.	C	A	.	PASS	AR2=0.998;DR2=0.999;AF=0.464	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.425:0.576,0.423,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18875926	SNP-3.18874685.	C	A	.	PASS	AR2=0.992;DR2=0.994;AF=0.309	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.572:0.048,0.332,0.62	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.963,0.037,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:0.943:0.155,0.747,0.098	1|1:1.899:0.001,0.099,0.9	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.545:0.064,0.328,0.609	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.957:0.001,0.042,0.957	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.972:0,0.027,0.973	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18875999	SNP-3.18874758.	A	G	.	PASS	AR2=1;DR2=1;AF=0.243	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18880737	SNP-3.18879496.	A	G	.	PASS	AR2=1;DR2=1;AF=0.249	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.969,0.031,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18882188	SNP-3.18880947.	C	A	.	PASS	AR2=0.928;DR2=0.947;AF=0.376	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.291:0.736,0.237,0.027	1|1:2:0,0,1	0|0:0.23:0.776,0.218,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.77:0.013,0.203,0.783	1|1:1.949:0.001,0.049,0.95	1|1:1.611:0.038,0.313,0.649	0|0:0.318:0.709,0.264,0.027	0|0:0.23:0.785,0.2,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.323:0.699,0.278,0.023	1|1:2:0,0,1	0|0:0.383:0.658,0.301,0.041	0|0:0.047:0.954,0.046,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.412:0.635,0.319,0.046	1|1:2:0,0,1	0|0:0.16:0.847,0.145,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.339:0.693,0.274,0.032	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.141:0.86,0.139,0.001	0|0:0.332:0.696,0.275,0.029	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.422:0.629,0.319,0.052	0|0:0.215:0.789,0.206,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.078:0.925,0.072,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.078:0.923,0.075,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.906:0.002,0.09,0.908	1|1:2:0,0,1	1|1:1.521:0.06,0.359,0.581	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.526:0.057,0.36,0.583	1|1:2:0,0,1	1|1:1.619:0.033,0.315,0.652	1|0:1.546:0.051,0.353,0.596	1|1:2:0,0,1	1|1:1.58:0.042,0.336,0.622	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.979:0,0.021,0.979	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.97:0.001,0.029,0.97	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.78:0.012,0.196,0.792	0|0:0:1,0,0	1|1:1.911:0.002,0.086,0.913	1|1:1.609:0.035,0.321,0.644	1|1:1.637:0.03,0.304,0.667	1|1:2:0,0,1	1|1:1.895:0.002,0.1,0.897	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.979:0.001,0.02,0.979	1|1:1.603:0.042,0.314,0.645	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.338:0.687,0.288,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.921,0.079,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.383:0.653,0.311,0.036	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.944:0.001,0.053,0.945	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.414:0.632,0.323,0.046	0|0:0.446:0.614,0.327,0.059	1|1:1.5:0.067,0.366,0.567	0|0:0.342:0.688,0.283,0.029	0|0:0.227:0.773,0.227,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.289:0.731,0.249,0.02	0|0:0:1,0,0	0|0:0.346:0.692,0.271,0.038	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.36:0.664,0.312,0.024	1|1:2:0,0,1	0|0:0.384:0.656,0.304,0.04	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.383:0.657,0.304,0.04	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.298:0.731,0.24,0.029	1|1:2:0,0,1	0|0:0.336:0.693,0.278,0.029	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.399:0.643,0.314,0.042	1|1:1.522:0.062,0.353,0.584	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18883386	SNP-3.18882145.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.357	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.015,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.301:0.704,0.29,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.894:0.003,0.101,0.896	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:1.925:0.001,0.072,0.927	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.39:0.61,0.39,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.954:0,0.046,0.954	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.942:0.001,0.056,0.943	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18884077	SNP-3.18882836.	C	A	.	PASS	AR2=0.995;DR2=0.997;AF=0.445	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.944:0.002,0.052,0.946	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.358:0.035,0.572,0.393	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.635:0.013,0.34,0.647	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.952:0,0.047,0.952	1|1:2:0,0,1	1|1:1.846:0.013,0.128,0.859	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18884772	SNP-3.18883531.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.375	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.139:0.867,0.127,0.006	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.937,0.062,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.425:0.586,0.404,0.011	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.93,0.069,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.933,0.066,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.947,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18887307	SNP-3.18886066.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.244	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:1.974:0,0.026,0.974	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.731:0.001,0.267,0.732	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.018,0.982	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.98:0,0.02,0.98	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|1:1.013:0.005,0.976,0.019	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.981:0,0.019,0.981	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18889381	SNP-3.18888140.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.332	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:0.897:0.173,0.758,0.069	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18891889	SNP-3.18890648.	C	A	.	PASS	AR2=0.992;DR2=0.993;AF=0.427	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.846:0.006,0.142,0.852	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.906:0.101,0.892,0.007	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.823:0.007,0.162,0.831	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.904:0.103,0.89,0.007	1|1:1.664:0.044,0.247,0.709	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.897:0.004,0.096,0.9	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.821:0.011,0.156,0.832	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.798:0.01,0.181,0.808	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.863:0.004,0.13,0.866	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.746:0.017,0.22,0.763	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18893246	SNP-3.18892005.	C	A	.	PASS	AR2=1;DR2=1;AF=0.344	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18901067	SNP-3.18899826.	C	A	.	PASS	AR2=0.998;DR2=0.999;AF=0.355	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.41:0.591,0.408,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18901541	SNP-3.18900300.	C	A	.	PASS	AR2=0.969;DR2=0.978;AF=0.293	GT:DS:GP	0|0:0.033:0.967,0.032,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.88:0.204,0.713,0.084	1|1:1.936:0.001,0.062,0.937	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.926,0.072,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:1.716:0.016,0.252,0.732	1|1:1.927:0.001,0.07,0.929	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.038:0.962,0.037,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.207:0.803,0.188,0.01	0|0:0:1,0,0	0|1:0.506:0.534,0.427,0.04	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.971:0,0.029,0.971	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	0|0:0:1,0,0	1|0:0.53:0.491,0.487,0.021	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	0|0:0.069:0.931,0.069,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.079:0.002,0.917,0.081	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.061:0.939,0.06,0.001	1|1:1.932:0.001,0.067,0.932	0|0:0.151:0.856,0.137,0.007	0|0:0.259:0.752,0.237,0.011	0|1:0.762:0.32,0.598,0.082	1|1:1.92:0.001,0.077,0.921	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.248:0.762,0.229,0.009	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.97:0,0.029,0.971	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.936:0,0.064,0.936	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0.001,0.03,0.969	0|0:0:1,0,0	1|1:1.984:0,0.016,0.984	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.168:0.246,0.34,0.414	0|0:0.043:0.959,0.04,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.213:0.797,0.192,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.245:0.769,0.217,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.843:0.242,0.674,0.085	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.95:0.003,0.044,0.953	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.956,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.967:0.001,0.03,0.969	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18901857	SNP-3.18900616.	C	A	.	PASS	AR2=0.966;DR2=0.97;AF=0.308	GT:DS:GP	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.963:0.001,0.036,0.964	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.073:0.215,0.496,0.289	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.928:0.001,0.07,0.929	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1.106:0.201,0.492,0.307	1|0:1.08:0.213,0.495,0.293	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1.068:0.218,0.496,0.286	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.247:0.133,0.486,0.381	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.217:0.783,0.217,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1.096:0.205,0.494,0.301	0|1:1.323:0.099,0.48,0.422	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0.001,0.03,0.969	1|0:1.119:0.192,0.496,0.311	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|0:1.388:0.023,0.565,0.411	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.395:0.069,0.467,0.464	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0.001,0.03,0.969	0|0:0.289:0.775,0.161,0.064	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.099:0.204,0.493,0.303	1|1:1.192:0.181,0.445,0.374	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18902596	SNP-3.18901355.	A	G	.	PASS	AR2=0.899;DR2=0.926;AF=0.257	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.443:0.078,0.401,0.521	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.614:0.477,0.432,0.091	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.678:0.342,0.637,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.856:0.253,0.638,0.109	1|1:2:0,0,1	1|0:1.606:0.019,0.355,0.626	0|1:1.42:0.085,0.411,0.504	1|0:1.364:0.023,0.591,0.387	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.325:0.115,0.444,0.44	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.668:0.368,0.596,0.036	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.538:0.498,0.465,0.036	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.581:0.486,0.448,0.067	0|0:0:1,0,0	0|0:0.026:0.975,0.024,0.001	1|0:0.877:0.235,0.653,0.112	0|0:0.019:0.981,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.709:0.42,0.451,0.129	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.514:0.006,0.473,0.521	0|0:0:1,0,0	0|0:0.452:0.625,0.299,0.076	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.346:0.696,0.261,0.042	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:1.492:0.096,0.317,0.588	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.17:0.836,0.158,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.096:0.904,0.096,0	0|0:0.185:0.823,0.168,0.009	0|0:0.24:0.771,0.218,0.011	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.46:0.579,0.381,0.039	0|0:0:1,0,0	0|0:0.157:0.849,0.144,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.151:0.855,0.139,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.019:0.981,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.894:0.299,0.509,0.193	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.275:0.729,0.266,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.771:0.01,0.209,0.781	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.712:0.403,0.481,0.115	1|0:1.093:0.196,0.516,0.289	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.139:0.867,0.127,0.006	1|1:1.302:0.119,0.46,0.421	1|0:0.819:0.248,0.685,0.067	1|1:1.139:0.19,0.481,0.329	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.143:0.867,0.123,0.01	0|0:0:1,0,0	0|0:0.395:0.605,0.395,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.355:0.108,0.43,0.463	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.962:0.266,0.505,0.228	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.88:0.338,0.443,0.219	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.432:0.084,0.401,0.515	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.6:0.501,0.398,0.101	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.13:0.88,0.11,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	18919878	SNP-3.18918637.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.352	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	1|1:1.944:0.001,0.055,0.944	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.841:0.007,0.146,0.848	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.959,0.04,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.967:0,0.033,0.967	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18921244	SNP-3.18920003.	C	A	.	PASS	AR2=0.966;DR2=0.972;AF=0.291	GT:DS:GP	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.841:0.007,0.146,0.848	0|0:0.868:0.322,0.489,0.189	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.803:0.362,0.473,0.165	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.949:0,0.051,0.949	1|1:2:0,0,1	1|1:1.749:0.015,0.22,0.764	1|1:2:0,0,1	0|0:0.971:0.267,0.495,0.238	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.892:0.003,0.102,0.895	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:0.969:0.27,0.49,0.239	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:1.139:0.177,0.507,0.316	0|0:0:1,0,0	1|1:1.868:0.004,0.123,0.873	0|0:0.134:0.866,0.134,0	1|1:2:0,0,1	1|1:1.739:0.02,0.222,0.758	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.999:0.253,0.495,0.252	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.947:0.273,0.508,0.22	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.865:0.005,0.126,0.87	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.888:0.003,0.105,0.891	1|1:2:0,0,1	1|1:1.961:0.002,0.035,0.963	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:1.034:0.349,0.267,0.383	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18922800	SNP-3.18921559.	C	A	.	PASS	AR2=0.986;DR2=0.988;AF=0.383	GT:DS:GP	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.116:0.889,0.105,0.005	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.121:0.882,0.115,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.931:0.003,0.063,0.934	1|1:2:0,0,1	1|1:1.912:0.004,0.081,0.916	1|1:1.92:0.004,0.073,0.923	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.902:0.004,0.091,0.906	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.871:0.004,0.12,0.875	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.94:0.001,0.057,0.942	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	1|1:2:0,0,1	0|0:0.146:0.856,0.143,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.17:0.842,0.146,0.012	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.699:0.317,0.667,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.146:0.861,0.132,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.297:0.726,0.252,0.022	0|0:0:1,0,0	0|0:0.266:0.744,0.246,0.01	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.121:0.885,0.109,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.148:0.859,0.133,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.958,0.042,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.021:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.01,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.297:0.726,0.252,0.022	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.881:0.005,0.109,0.886	0|0:0:1,0,0
+3	18923292	SNP-3.18922051.	C	A	.	PASS	AR2=0.995;DR2=0.995;AF=0.333	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.23:0.101,0.569,0.33	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1.167:0.168,0.498,0.335	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.881:0.007,0.105,0.888	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18923377	SNP-3.18922136.	A	G	.	PASS	AR2=0.992;DR2=0.994;AF=0.299	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.129:0.877,0.117,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.965:0,0.034,0.965	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.179:0.83,0.16,0.01	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.678:0.417,0.488,0.095	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.38:0.642,0.335,0.022	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.092:0.908,0.092,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.986:0,0.013,0.987	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.22:0.797,0.187,0.016	1|1:2:0,0,1
+3	18923502	SNP-3.18922261.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.362	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.086:0.916,0.082,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.98,0.02,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.076:0.926,0.073,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18924201	SNP-3.18922960.	C	A	.	PASS	AR2=0.996;DR2=0.996;AF=0.344	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.963,0.036,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.033:0.968,0.032,0	0|0:0:1,0,0	0|0:0.026:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.937:0.001,0.061,0.938	1|1:1.919:0.002,0.076,0.922	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.064:0.936,0.064,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.907:0.001,0.09,0.909	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	1|1:1.941:0.001,0.057,0.942	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.945:0.001,0.053,0.946	1|1:1.979:0,0.021,0.979	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.035,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.985:0,0.015,0.985	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.852:0.017,0.115,0.868	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18925620	SNP-3.18924379.	A	G	.	PASS	AR2=0.926;DR2=0.943;AF=0.426	GT:DS:GP	1|0:1.341:0.096,0.467,0.437	0|0:0:1,0,0	1|1:1.982:0,0.018,0.982	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.422:0.09,0.398,0.512	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.061:0.244,0.45,0.305	0|0:0.544:0.527,0.402,0.071	1|0:0.837:0.338,0.487,0.175	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.933:0.262,0.544,0.195	0|0:0:1,0,0	1|1:1.774:0,0.226,0.774	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.976:0,0.024,0.976	0|0:0.697:0.428,0.446,0.126	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.622:0.439,0.501,0.06	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.888:0.328,0.457,0.216	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.19:0.158,0.494,0.348	1|1:1.661:0.058,0.223,0.719	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.062:0.196,0.547,0.258	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.619:0.018,0.344,0.638	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.296:0.121,0.462,0.417	1|1:1.983:0,0.017,0.983	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.263:0.739,0.259,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.476:0.599,0.325,0.075	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.611:0.481,0.428,0.091	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.857:0.328,0.487,0.185	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.17:0,0.83,0.17	0|0:0:1,0,0	0|1:1.315:0.112,0.461,0.427	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.933:0.001,0.064,0.935	0|0:0.534:0.525,0.415,0.06	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.463:0.596,0.345,0.059	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.288:0.148,0.417,0.435	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.315:0.123,0.44,0.438	1|1:2:0,0,1	1|0:1.146:0.154,0.545,0.3	0|1:1.143:0.031,0.794,0.175	1|1:1.824:0,0.176,0.824	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.62:0.029,0.323,0.649	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.307:0.102,0.488,0.409	0|1:1.448:0.076,0.4,0.524	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.825:0.361,0.453,0.186	0|0:0:1,0,0	1|1:1.982:0,0.017,0.982	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.042:0.239,0.48,0.281	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:1.475:0.071,0.384,0.546	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	18926620	SNP-3.18925379.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.344	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.972:0,0.028,0.972	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.893:0.002,0.104,0.895	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.842:0.007,0.145,0.848	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.826:0.008,0.158,0.834	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.846:0.006,0.142,0.852	1|1:1.97:0,0.03,0.97	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.83:0.008,0.154,0.838	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.904:0.001,0.093,0.906	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.912:0.005,0.078,0.917	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.863:0.011,0.116,0.873	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18929154	SNP-3.18927913.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.245	GT:DS:GP	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.046:0.954,0.045,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.736:0.001,0.262,0.737	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.965:0,0.034,0.965	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.967:0,0.032,0.967	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18929968	SNP-3.18928727.	C	A	.	PASS	AR2=0.963;DR2=0.972;AF=0.454	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.004:0.246,0.503,0.25	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.495:0.045,0.415,0.54	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.486:0.574,0.366,0.06	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1.047:0.227,0.5,0.274	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.372:0.095,0.438,0.467	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.919:0,0.08,0.919	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.78:0.012,0.196,0.792	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.941:0.002,0.055,0.943	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.375:0.704,0.217,0.079	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.198:0.173,0.456,0.371	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.764:0.383,0.47,0.147	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0.57:0.512,0.406,0.082	1|0:0.95:0.277,0.497,0.227	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:0.951:0.276,0.497,0.227	0|0:0.568:0.514,0.405,0.082	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.813:0.009,0.17,0.821	0|0:0:1,0,0
+3	18930411	SNP-3.18929170.	C	A	.	PASS	AR2=1;DR2=1;AF=0.471	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.016,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18930486	SNP-3.18929245.	C	A	.	PASS	AR2=0.968;DR2=0.977;AF=0.48	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.97,0.03,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.069:0.932,0.067,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.397:0.668,0.266,0.065	0|0:0.195:0.82,0.165,0.015	0|0:0.334:0.7,0.266,0.034	1|1:2:0,0,1	0|0:0.35:0.691,0.267,0.042	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.394:0.65,0.305,0.044	0|0:0:1,0,0	1|1:1.934:0,0.066,0.934	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.036:0.964,0.036,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.969,0.031,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.39:0.655,0.3,0.045	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.431:0.623,0.324,0.054	0|0:0.433:0.621,0.325,0.054	0|0:0.41:0.642,0.307,0.051	0|0:0:1,0,0	0|0:0.433:0.621,0.325,0.054	0|0:0:1,0,0	0|0:0.369:0.673,0.286,0.041	0|0:0.433:0.621,0.325,0.054	0|0:0.317:0.718,0.246,0.035	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.433:0.621,0.325,0.054	0|0:0:1,0,0	0|0:0.426:0.626,0.321,0.052	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.433:0.621,0.325,0.054	1|1:2:0,0,1	0|0:0.402:0.65,0.299,0.051	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18930903	SNP-3.18929662.	A	G	.	PASS	AR2=0.996;DR2=0.997;AF=0.27	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.017:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.142:0.862,0.135,0.003	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0.786:0.362,0.489,0.149	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18932532	SNP-3.18931291.	A	G	.	PASS	AR2=0.996;DR2=0.996;AF=0.229	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.957,0.043,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.916:0.004,0.077,0.919	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.744:0.015,0.226,0.759	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.961:0,0.039,0.961	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.951:0.001,0.047,0.952	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.914:0.003,0.081,0.917	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.927:0.003,0.067,0.93	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18934236	SNP-3.18932995.	C	A	.	PASS	AR2=1;DR2=1;AF=0.354	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18937085	SNP-3.18935844.	A	G	.	PASS	AR2=0.921;DR2=0.936;AF=0.219	GT:DS:GP	0|0:0.055:0.945,0.054,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.159:0.176,0.488,0.336	0|0:0:1,0,0	1|1:1.278:0.116,0.491,0.394	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	1|1:1.993:0,0.006,0.994	1|1:1.729:0.024,0.223,0.753	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.573:0.041,0.344,0.614	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.162:0.841,0.157,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.997:0.236,0.53,0.233	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.711:0.01,0.269,0.721	0|1:1.16:0.177,0.487,0.336	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:1.027:0.229,0.514,0.256	1|1:1.456:0.068,0.409,0.523	0|0:0:1,0,0	1|0:0.426:0.636,0.302,0.062	0|0:0.53:0.563,0.344,0.093	0|0:0.137:0.885,0.094,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.132:0.872,0.124,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.096:0.905,0.094,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.374:0.673,0.28,0.047	1|1:2:0,0,1	0|0:0.036:0.964,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.061:0.939,0.061,0	0|0:0:1,0,0	0|0:0.033:0.968,0.032,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.368:0.661,0.31,0.029	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.02,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.256:0.747,0.25,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.493:0.015,0.476,0.509	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.072:0.929,0.07,0.001	0|0:0:1,0,0	1|1:1.939:0.001,0.059,0.94	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.414:0.634,0.317,0.049	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.153:0.853,0.141,0.006	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.321:0.039,0.601,0.36	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.02:0.201,0.578,0.221	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	0|0:0.153:0.853,0.141,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.921:0.284,0.51,0.205	0|0:0.864:0.344,0.447,0.209	0|0:0:1,0,0	0|1:0.964:0.248,0.539,0.213	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.932,0.068,0	0|0:0.414:0.635,0.317,0.048	0|0:0.04:0.96,0.039,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.1:0.902,0.097,0.001	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.075:0.926,0.072,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.357:0.029,0.585,0.386	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.27:0.765,0.2,0.035	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.145:0.862,0.131,0.007
+3	18937985	SNP-3.18936744.	A	G	.	PASS	AR2=0.958;DR2=0.968;AF=0.253	GT:DS:GP	0|0:0.039:0.961,0.039,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.124:0.877,0.122,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.953:0.001,0.046,0.953	0|0:0:1,0,0	1|0:0.97:0.314,0.402,0.284	1|1:1.91:0.005,0.081,0.915	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.946,0.053,0.001	0|0:0.027:0.973,0.027,0	0|0:0.036:0.964,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.033,0.001	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.38:0.659,0.301,0.039	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.053:0.948,0.051,0.001	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	0|0:0.058:0.942,0.057,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.467:0.078,0.377,0.545	0|0:0.125:0.876,0.122,0.001	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.469:0.073,0.385,0.542	0|1:1.425:0.086,0.404,0.51	1|1:1.472:0.076,0.376,0.548	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.019,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.162:0.839,0.16,0.001	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.459:0.08,0.381,0.539	1|1:1.323:0.093,0.491,0.416	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.276:0.139,0.447,0.414	0|0:0.098:0.902,0.098,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.078:0.922,0.077,0	0|0:0.078:0.922,0.078,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.942:0,0.057,0.942	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.975:0.283,0.458,0.259	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.9:0.006,0.088,0.906	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0.051:0.95,0.049,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.184:0.824,0.168,0.008	0|0:0:1,0,0
+3	18939087	SNP-3.18937846.	C	A	.	PASS	AR2=0.951;DR2=0.964;AF=0.295	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.776:0.013,0.199,0.788	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.579:0.025,0.371,0.604	1|1:1.836:0.009,0.147,0.844	1|1:1.963:0.001,0.036,0.964	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.813:0.009,0.17,0.821	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.685:0.023,0.268,0.709	0|0:0.281:0.744,0.231,0.025	1|1:1.738:0.011,0.241,0.748	1|0:0.626:0.452,0.471,0.077	0|0:0.249:0.772,0.207,0.021	0|0:0.595:0.485,0.435,0.08	0|0:0.313:0.715,0.257,0.028	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.814:0.01,0.166,0.824	1|1:1.613:0.016,0.355,0.629	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.998,0.002,0	1|1:2:0,0,1	1|1:1.711:0.014,0.261,0.725	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.789:0.011,0.189,0.8	0|0:0.257:0.765,0.214,0.021	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.494:0.572,0.362,0.066	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.634:0.031,0.305,0.665	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.683:0.025,0.267,0.708	1|1:1.62:0.037,0.306,0.657	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.91:0.003,0.083,0.913	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.782:0.012,0.193,0.794	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.68:0.457,0.405,0.138	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.724:0.008,0.261,0.731	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.897:0.002,0.098,0.9	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.78:0.012,0.195,0.792	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.775:0.013,0.199,0.788	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.654:0.036,0.275,0.69	1|1:1.973:0,0.026,0.973	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.622:0.048,0.282,0.67	0|0:0:1,0,0
+3	18939114	SNP-3.18937873.	C	A	.	PASS	AR2=0.973;DR2=0.978;AF=0.277	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.457:0.12,0.303,0.577	1|1:2:0,0,1	1|1:1.118:0.19,0.503,0.308	1|1:2:0,0,1	0|1:1.394:0.057,0.492,0.451	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.853:0.006,0.135,0.859	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.608:0.013,0.365,0.621	0|0:0.266:0.738,0.258,0.004	0|0:0:1,0,0	0|0:0.19:0.814,0.182,0.004	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:0.791:0.272,0.665,0.063	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.687:0.348,0.617,0.035	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.952:0.001,0.046,0.953	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.779:0.022,0.178,0.801	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.822:0.007,0.165,0.829	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.917:0.006,0.072,0.922	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.108:0.219,0.455,0.327	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.556:0.066,0.313,0.621	0|0:0:1,0,0
+3	18948677	SNP-3.18947436.	C	A	.	PASS	AR2=0.987;DR2=0.989;AF=0.371	GT:DS:GP	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.03:0.97,0.029,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.948,0.051,0.001	0|0:0:1,0,0	0|0:0.123:0.879,0.118,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0.066:0.935,0.064,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.082:0.92,0.078,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.937:0.001,0.061,0.938	1|1:2:0,0,1	1|1:1.962:0.001,0.037,0.963	1|1:2:0,0,1	1|1:1.924:0.001,0.074,0.925	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.944:0.001,0.054,0.945	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.941:0.001,0.057,0.942	0|0:0.333:0.677,0.313,0.01	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.195:0.811,0.184,0.006	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.162:0.845,0.148,0.007	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.954:0.001,0.045,0.954	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.951,0.048,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.965:0.001,0.034,0.965	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.929,0.068,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.96:0.001,0.039,0.96	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.035:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.182:0.827,0.164,0.009	0|0:0.144:0.86,0.136,0.004	1|1:1.941:0.001,0.058,0.942	0|0:0.138:0.865,0.132,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.207:0.801,0.191,0.008	1|1:1.945:0.001,0.054,0.946	0|0:0.161:0.845,0.148,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.961:0.001,0.038,0.961	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.886:0.004,0.106,0.89	0|0:0:1,0,0
+3	18948838	SNP-3.18947597.	C	A	.	PASS	AR2=0.922;DR2=0.945;AF=0.499	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.374:0.652,0.321,0.026	1|1:2:0,0,1	0|1:0.575:0.506,0.413,0.081	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.23:0.782,0.207,0.011	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.446:0.594,0.366,0.04	0|0:0:1,0,0	0|1:0.635:0.448,0.469,0.083	0|0:0.031:0.969,0.03,0.001	0|0:0:1,0,0	0|0:0.618:0.478,0.426,0.096	0|0:0.087:0.913,0.086,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.194:0.25,0.306,0.444	0|0:0.434:0.636,0.293,0.071	0|0:0.328:0.707,0.258,0.035	0|0:0:1,0,0	0|0:0.293:0.728,0.252,0.02	0|0:0.328:0.701,0.27,0.029	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.391:0.649,0.312,0.04	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.205:0.135,0.524,0.341	0|0:0:1,0,0	0|0:0.357:0.655,0.333,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.98:0,0.019,0.98	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.331:0.697,0.275,0.028	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|1:0.694:0.394,0.517,0.089	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.405:0.635,0.325,0.04	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.193:0.82,0.167,0.013	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.236:0.782,0.201,0.018	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:1.998:0,0.002,0.998	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.979:0,0.02,0.979	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.36:0.672,0.296,0.032	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.186:0.82,0.174,0.006	0|0:0.568:0.51,0.411,0.078	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.257:0.763,0.218,0.019	1|1:2:0,0,1	0|0:0.309:0.713,0.265,0.022	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.123:0.877,0.122,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.719:0.5,0.28,0.22	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.239:0.779,0.203,0.018	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.34:0.687,0.287,0.027	0|0:0.313:0.712,0.262,0.025	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.612:0.464,0.461,0.075	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.221:0.792,0.195,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.426:0.099,0.375,0.526	1|1:2:0,0,1	0|1:0.677:0.418,0.487,0.095	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.415:0.633,0.32,0.047	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.354:0.106,0.434,0.46	1|1:1.264:0.141,0.454,0.405	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:1.491:0.11,0.289,0.601	0|0:0:1,0,0	1|1:1.612:0.068,0.252,0.68	0|0:0.734:0.406,0.454,0.14	1|1:2:0,0,1	0|0:0:1,0,0
+3	18950066	SNP-3.18948825.	C	A	.	PASS	AR2=0.971;DR2=0.975;AF=0.494	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.142:0.864,0.131,0.005	0|0:0.174:0.834,0.159,0.008	1|1:2:0,0,1	0|0:0.243:0.768,0.221,0.011	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.141:0.864,0.13,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.218:0.79,0.202,0.008	0|0:0:1,0,0	0|0:0.334:0.692,0.283,0.026	0|0:0.2:0.81,0.18,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.128:0.873,0.125,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1.03:0.234,0.502,0.264	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0.001,0.031,0.969	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.297:0.125,0.453,0.422	1|0:1.255:0.141,0.464,0.396	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.245:0.143,0.469,0.388	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:1.242:0.147,0.465,0.388	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.191:0.816,0.177,0.007	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.084:0.918,0.079,0.002	0|0:0.529:0.548,0.374,0.078	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.082:0.921,0.076,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.255:0.141,0.464,0.396	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.192:0.813,0.182,0.005	0|0:0:1,0,0	1|0:1.248:0.142,0.468,0.39	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.735:0.018,0.229,0.753	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.916:0,0.084,0.916	0|0:0:1,0,0
+3	18950548	SNP-3.18949307.	A	G	.	PASS	AR2=0.95;DR2=0.959;AF=0.515	GT:DS:GP	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.811:0.008,0.172,0.82	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.844:0.009,0.138,0.853	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.805:0.01,0.175,0.815	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.701:0.022,0.255,0.723	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.804:0.009,0.178,0.813	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.339:0.11,0.441,0.449	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.996:0.262,0.479,0.259	1|1:1.902:0.002,0.095,0.903	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.908:0.002,0.089,0.91	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.974:0.276,0.474,0.25	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.09:0.21,0.489,0.3	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.637:0.014,0.335,0.651	0|0:0:1,0,0	1|1:1.548:0.038,0.377,0.585	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.09:0.21,0.489,0.3	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.578:0.042,0.338,0.62	0|0:0:1,0,0	1|1:1.903:0.004,0.09,0.907	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.923:0.284,0.508,0.208	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.735:0.018,0.229,0.753	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.947:0.002,0.048,0.95	0|0:0.595:0.495,0.415,0.09	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.923:0.002,0.073,0.925	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.791:0.017,0.174,0.808	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.091:0.21,0.489,0.301	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.881:0.005,0.109,0.886	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.817:0.008,0.166,0.825	0|0:0:1,0,0	1|1:1.595:0.037,0.33,0.632	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.709:0.024,0.242,0.733	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.233:0.795,0.177,0.028	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.91:0.003,0.085,0.913	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.096:0.208,0.488,0.304	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.887:0.005,0.104,0.892	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.83:0.01,0.15,0.84	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.09:0.21,0.489,0.3	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.945:0.002,0.052,0.947	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	18950913	SNP-3.18949672.	C	A	.	PASS	AR2=0.97;DR2=0.979;AF=0.354	GT:DS:GP	0|0:0:1,0,0	1|1:1.919:0.002,0.076,0.921	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.901:0.003,0.093,0.904	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.055:0.945,0.055,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.954,0.046,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.27:0.737,0.255,0.008	0|0:0:1,0,0	0|0:0.101:0.905,0.089,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0.088:0.913,0.086,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.25:0.187,0.375,0.438	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:1.805:0.006,0.183,0.811	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.701:0.029,0.241,0.73	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.912:0.002,0.084,0.914	0|0:0.132:0.87,0.129,0.002	1|1:1.923:0.002,0.073,0.925	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.937:0.002,0.06,0.939	0|0:0.308:0.716,0.26,0.024	0|0:0.309:0.715,0.261,0.024	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.868:0.002,0.127,0.87	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.898:0.004,0.095,0.902	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.034:0.967,0.032,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.967,0.032,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.318:0.707,0.267,0.025	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.157:0.846,0.152,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.517:0.515,0.452,0.033	1|1:1.942:0.002,0.054,0.944	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.94,0.059,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.447:0.599,0.356,0.046	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.186:0.254,0.307,0.44	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	18964247	SNP-3.18963006.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.363	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.056:0.944,0.056,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.165:0.842,0.151,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.949,0.05,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.214:0.791,0.205,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18967087	SNP-3.18965846.	A	G	.	PASS	AR2=0.94;DR2=0.953;AF=0.375	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.872:0.003,0.121,0.875	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|1:1.103:0.192,0.514,0.295	0|0:0:1,0,0	1|1:1.398:0.181,0.24,0.579	1|1:1.585:0.044,0.326,0.629	0|0:0:1,0,0	0|1:1.163:0.163,0.51,0.327	0|0:0.469:0.553,0.425,0.022	1|1:1.779:0.018,0.186,0.796	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.206:0.804,0.185,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.361:0.656,0.327,0.017	0|0:0.019:0.982,0.018,0	0|1:0.566:0.467,0.5,0.033	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.213:0.798,0.191,0.011	0|0:0:1,0,0	0|0:0.45:0.611,0.329,0.06	0|0:0.146:0.86,0.134,0.006	0|0:0:1,0,0	1|0:0.487:0.553,0.407,0.04	1|1:2:0,0,1	1|1:1.845:0.004,0.146,0.849	0|1:0.72:0.35,0.581,0.069	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:0.979:0.277,0.467,0.256	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.981,0.019,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.469:0.553,0.426,0.021	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.959,0.04,0.001	0|0:0:1,0,0	0|1:0.744:0.377,0.502,0.121	0|0:0:1,0,0	0|0:0:1,0,0	0|0:1.1:0.246,0.408,0.346	0|0:0:1,0,0	0|0:0.336:0.693,0.278,0.029	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.191:0.1,0.61,0.29	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0.157:0.847,0.15,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.885:0.262,0.591,0.147	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.446:0.599,0.356,0.045	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.842:0.006,0.146,0.848	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.836:0.007,0.151,0.842	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.005:0.996,0.004,0	0|0:0.436:0.617,0.329,0.053	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.532:0.52,0.427,0.053	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.118:0.886,0.109,0.005	1|1:2:0,0,1	0|0:0.808:0.389,0.414,0.197	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.827:0.008,0.158,0.835	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.106:0.898,0.097,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.193:0.819,0.168,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.302:0.753,0.191,0.056	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.005:0.996,0.004,0	0|0:0:1,0,0	1|1:1.829:0.012,0.147,0.841
+3	18967396	SNP-3.18966155.	A	G	.	PASS	AR2=0.994;DR2=0.994;AF=0.258	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.772:0.396,0.435,0.169	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.962:0,0.038,0.962	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.13:0.87,0.13,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.839:0.302,0.557,0.141	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	18967417	SNP-3.18966176.	A	G	.	PASS	AR2=0.977;DR2=0.983;AF=0.499	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.666:0.009,0.315,0.676	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.608:0.005,0.383,0.613	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.615:0.008,0.369,0.623	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.958:0,0.042,0.958	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.027,0.972	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.978:0,0.021,0.978	1|1:1.826:0.005,0.164,0.831	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.962:0,0.038,0.962	1|1:1.967:0,0.033,0.967	0|0:0:1,0,0	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.018,0.981	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.836:0.335,0.495,0.17	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.265:0.753,0.228,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.101:0.91,0.079,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.067:0.063,0.807,0.13	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.256:0.761,0.221,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.261:0.757,0.224,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.807:0.006,0.181,0.813	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.487:0.047,0.42,0.533	1|1:2:0,0,1	1|1:1.978:0,0.021,0.979	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.172:0.835,0.157,0.008	1|0:1.592:0.008,0.392,0.6	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.533:0.057,0.352,0.591	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.871:0.002,0.126,0.873	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.951:0.001,0.047,0.952	1|1:2:0,0,1	1|1:1.949:0.001,0.048,0.95	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	18968191	SNP-3.18966950.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.342	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.202:0.798,0.202,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.121:0.884,0.111,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.508:0.062,0.368,0.57	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.966:0,0.034,0.966	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.088:0.913,0.087,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.981:0,0.018,0.981	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.12:0.884,0.111,0.005	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.939:0,0.06,0.939	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	18986724	SNP-3.18985483.	C	A	.	PASS	AR2=0.899;DR2=0.93;AF=0.265	GT:DS:GP	0|0:0:1,0,0	1|1:1.802:0.012,0.174,0.814	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.31:0.131,0.428,0.441	1|1:1.806:0.011,0.171,0.817	1|1:1.816:0.011,0.161,0.828	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.758:0.015,0.211,0.774	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.531:0.554,0.361,0.085	1|1:2:0,0,1	0|1:1.173:0.216,0.396,0.388	1|1:1.399:0.083,0.435,0.482	0|0:0.627:0.487,0.398,0.115	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.462:0.076,0.386,0.538	1|1:1.514:0.06,0.365,0.575	1|1:1.543:0.054,0.349,0.597	1|1:1.616:0.038,0.308,0.654	1|1:1.537:0.055,0.352,0.592	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.957:0.317,0.409,0.274	1|1:2:0,0,1	1|0:0.944:0.228,0.599,0.172	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.668:0.028,0.276,0.696	0|0:0:1,0,0	1|1:1.791:0.013,0.182,0.805	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.246:0.063,0.627,0.309	0|0:0:1,0,0	0|1:0.897:0.374,0.356,0.271	1|1:1.542:0.054,0.349,0.596	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.565:0.048,0.338,0.614	1|1:1.711:0.023,0.242,0.735	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.527:0.036,0.402,0.562	1|1:1.737:0.025,0.212,0.763	1|0:1.138:0.227,0.409,0.365	0|0:0.889:0.418,0.275,0.307	1|1:2:0,0,1	1|1:1.535:0.056,0.352,0.592	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.65:0.04,0.27,0.69	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.64:0.042,0.275,0.683	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.538:0.042,0.377,0.58	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.624:0.482,0.413,0.106	0|0:0:1,0,0	1|0:0.765:0.376,0.483,0.141	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.424:0.673,0.23,0.097	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.504:0.574,0.348,0.078	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18987135	SNP-3.18985894.	C	A	.	PASS	AR2=0.976;DR2=0.982;AF=0.372	GT:DS:GP	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.987:0,0.013,0.987	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.978:0,0.021,0.978	1|1:2:0,0,1	1|1:1.87:0,0.13,0.87	1|0:0.663:0.44,0.458,0.102	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.044:0.956,0.044,0	1|1:1.861:0.001,0.137,0.862	0|0:0.523:0.569,0.339,0.092	0|0:0:1,0,0	0|0:0.46:0.569,0.401,0.029	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.444:0.041,0.473,0.486	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.935:0.248,0.569,0.183	1|1:1.912:0.002,0.084,0.914	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.989:0,0.011,0.989	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.924:0,0.076,0.924	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.479:0.015,0.492,0.494	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.147:0.171,0.51,0.319	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.043:0.957,0.043,0	1|1:1.622:0.055,0.268,0.677	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.695:0.027,0.252,0.721	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.976:0,0.023,0.977	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.862:0.009,0.12,0.871	0|0:0:1,0,0	1|1:1.889:0.009,0.092,0.898	1|1:2:0,0,1	1|1:1.869:0.003,0.125,0.872	0|0:0:1,0,0
+3	18988598	SNP-3.18987357.	C	A	.	PASS	AR2=0.997;DR2=0.997;AF=0.343	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.714:0.021,0.244,0.735	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0,0.032,0.968	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.691:0.019,0.272,0.709	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18988892	SNP-3.18987651.	C	A	.	PASS	AR2=0.958;DR2=0.966;AF=0.309	GT:DS:GP	0|0:0:1,0,0	1|1:1.814:0.009,0.168,0.823	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.831:0.007,0.155,0.838	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:1.714:0.019,0.249,0.732	1|1:1.842:0.006,0.146,0.848	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.614:0.04,0.306,0.654	1|1:2:0,0,1	1|1:1.677:0.034,0.255,0.711	1|1:1.675:0.034,0.256,0.71	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.878:0.007,0.109,0.885	1|1:1.493:0.074,0.359,0.567	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.834:0.007,0.151,0.842	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.882:0.005,0.108,0.887	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.75:0.021,0.208,0.771	0|0:0:1,0,0	1|1:1.753:0.021,0.206,0.773	1|1:1.562:0.045,0.348,0.607	1|1:2:0,0,1	1|1:1.837:0.007,0.15,0.843	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.633:0.038,0.291,0.671	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.896:0.004,0.095,0.901	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.495:0.063,0.38,0.558	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	0|1:1.171:0.149,0.532,0.319	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.859:0.008,0.126,0.867	1|1:1.849:0.007,0.136,0.856	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.961:0.001,0.037,0.962	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.542:0.059,0.34,0.601	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.903:0.004,0.09,0.906	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.675:0.028,0.27,0.703	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.691:0.026,0.258,0.716	0|0:0:1,0,0	1|1:1.789:0.012,0.186,0.801	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.977:0,0.022,0.977	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.873:0.006,0.116,0.879	0|0:0:1,0,0	1|1:1.005:0.279,0.438,0.283	1|1:1.939:0.003,0.056,0.942	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.591:0.075,0.26,0.665	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18988967	SNP-3.18987726.	C	A	.	PASS	AR2=0.982;DR2=0.985;AF=0.406	GT:DS:GP	0|0:0.108:0.894,0.103,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.016:0.984,0.016,0	0|0:0.111:0.895,0.098,0.007	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.978,0.022,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0.057:0.945,0.053,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.142:0.862,0.133,0.005	0|0:0.036:0.964,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.955,0.045,0.001	1|1:1.571:0.024,0.382,0.595	0|0:0:1,0,0	0|0:0.12:0.883,0.114,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.084:0.918,0.08,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.106:0.896,0.102,0.002	0|0:0:1,0,0	0|0:0.137:0.864,0.135,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.174:0.833,0.161,0.007	0|0:0.098:0.903,0.097,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.193:0.819,0.169,0.012	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.192:0.819,0.169,0.012	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.721:0.035,0.209,0.756	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.193:0.818,0.17,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.192:0.819,0.169,0.012	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.046:0.954,0.046,0	0|0:0:1,0,0	0|0:0.193:0.819,0.169,0.012	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.31:0.703,0.284,0.013	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.04:0.961,0.037,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.207:0.803,0.187,0.01	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.948,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.129:0.877,0.117,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.05,0.001	0|0:0.031:0.969,0.03,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.09:0.914,0.081,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.176:0.832,0.16,0.008	1|1:2:0,0,1	0|0:0:1,0,0
+3	18988984	SNP-3.18987743.	C	A	.	PASS	AR2=0.972;DR2=0.979;AF=0.417	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.136:0.871,0.122,0.007	0|0:0.045:0.956,0.043,0.001	1|0:1:0,1,0	0|0:0.052:0.949,0.051,0.001	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.957,0.043,0.001	0|0:0.096:0.906,0.092,0.002	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.679:0.447,0.426,0.126	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.883:0.216,0.685,0.099	0|0:0.101:0.904,0.092,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.127:0.876,0.121,0.003	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.63:0.475,0.421,0.104	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.052:0.226,0.496,0.278	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.844:0.321,0.513,0.165	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.051:0.95,0.049,0.001	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1.052:0.226,0.496,0.278	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.95,0.049,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.046:0.954,0.045,0.001	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.051:0.95,0.049,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.663:0.479,0.379,0.142	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.644:0.447,0.461,0.091	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.045:0.956,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.95,0.048,0.001	0|0:0.05:0.951,0.049,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.045:0.956,0.043,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18989003	SNP-3.18987762.	C	A	.	PASS	AR2=0.974;DR2=0.982;AF=0.427	GT:DS:GP	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.261:0.74,0.258,0.001	0|0:0.057:0.945,0.054,0.001	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.049:0.952,0.048,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.649:0.382,0.586,0.031	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.522:0.483,0.512,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.03:0.971,0.028,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.18:0.832,0.156,0.012	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.878:0,0.121,0.879	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.063:0.938,0.06,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.296:0.724,0.255,0.02	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.901:0.003,0.094,0.904	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.889:0.003,0.105,0.892	1|1:1.928:0.001,0.07,0.929	1|1:1.891:0.003,0.102,0.894	1|1:1.891:0.003,0.103,0.894	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.024:0.976,0.023,0.001	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.224:0.778,0.221,0.002	0|0:0.022:0.979,0.021,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.912:0,0.088,0.912	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.034:0.967,0.033,0.001	1|1:2:0,0,1	0|0:0.471:0.532,0.465,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.051,0.001	1|0:1.276:0.108,0.508,0.384	0|0:0.078:0.923,0.076,0.001	0|0:0:1,0,0	0|0:0.024:0.977,0.023,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.173:0.226,0.375,0.399	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.163:0.852,0.132,0.015	0|0:0.046:0.956,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.143:0.87,0.116,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.1:0.903,0.093,0.003	1|1:2:0,0,1	0|0:0:1,0,0
+3	18989771	SNP-3.18988530.	C	A	.	PASS	AR2=0.978;DR2=0.984;AF=0.402	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.195:0.814,0.176,0.01	0|0:0:1,0,0	0|0:0.202:0.808,0.182,0.01	0|0:0.18:0.829,0.162,0.009	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1.455:0.082,0.382,0.537	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.007:0.045,0.904,0.052	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.947,0.053,0.001	1|1:2:0,0,1	0|0:0.036:0.965,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.067:0.936,0.062,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.242:0.775,0.208,0.017	0|0:0:1,0,0	0|0:0.269:0.737,0.257,0.006	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.189:0.821,0.168,0.011	1|1:2:0,0,1	0|0:0.648:0.367,0.619,0.015	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.433:0.665,0.237,0.098	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.562:0.442,0.553,0.005	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.069:0.934,0.064,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.244:0.77,0.216,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.249:0.766,0.218,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.172:0.836,0.156,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.236:0.778,0.207,0.015	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.068:0.934,0.064,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18990208	SNP-3.18988967.	C	A	.	PASS	AR2=0.984;DR2=0.989;AF=0.336	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.924:0.001,0.073,0.926	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.715:0.488,0.31,0.202	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.838:0.013,0.135,0.852	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.861:0.005,0.13,0.866	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.778:0.016,0.191,0.794	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.876:0.004,0.116,0.88	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.949:0.002,0.048,0.951	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.693:0.027,0.252,0.72	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.91:0.002,0.087,0.911	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.916:0.003,0.079,0.919	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.492:0.052,0.405,0.543	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.947:0.001,0.051,0.948	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.72:0.005,0.271,0.724	0|0:0:1,0,0
+3	18990589	SNP-3.18989348.	C	A	.	PASS	AR2=0.979;DR2=0.984;AF=0.424	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.329:0.671,0.329,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.011:0.989,0.011,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.868:0.134,0.864,0.002	1|1:1.948:0,0.051,0.949	1|0:1.032:0.26,0.448,0.292	0|0:0.288:0.713,0.286,0.001	0|0:0.671:0.378,0.573,0.049	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.982:0,0.017,0.982	0|0:0.459:0.674,0.193,0.133	1|1:1.633:0.017,0.333,0.65	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.038:0.962,0.038,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.019:0.195,0.591,0.214	1|1:1.947:0.001,0.052,0.947	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.375:0.68,0.266,0.054	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.503:0.085,0.327,0.588	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.734:0.002,0.261,0.737	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.937:0,0.063,0.937	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.009:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.137:0.863,0.137,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18991158	SNP-3.18989917.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.372	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.931,0.062,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.125:0.879,0.118,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.143:0.86,0.137,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.168:0.84,0.152,0.008	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.526:0.003,0.467,0.53	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.094:0.906,0.093,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.12:0.884,0.113,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.928,0.072,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18993950	SNP-3.18992709.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.367	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.07:0.931,0.067,0.002	1|1:2:0,0,1	0|0:0.065:0.936,0.063,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.057:0.943,0.056,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.932,0.067,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.942,0.057,0.001	0|0:0:1,0,0	0|0:0.056:0.945,0.054,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.066:0.935,0.064,0.001	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.959,0.041,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.083:0.917,0.083,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.672:0.002,0.324,0.674	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.042:0.958,0.041,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.05:0.95,0.049,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.954,0.046,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.056:0.945,0.054,0.001	0|0:0.068:0.933,0.066,0.001	0|0:0:1,0,0	0|0:0.071:0.931,0.068,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.947,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	18994468	SNP-3.18993227.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.342	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:1.883:0.006,0.105,0.889	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.96:0.001,0.039,0.961	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.949:0,0.05,0.949	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.832:0.027,0.113,0.86	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19000902	SNP-3.18999661.	C	A	.	PASS	AR2=0.941;DR2=0.954;AF=0.288	GT:DS:GP	0|0:0:1,0,0	1|1:1.156:0.186,0.472,0.342	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.24:0.773,0.215,0.013	0|0:0:1,0,0	0|0:0.219:0.806,0.169,0.025	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.266:0.142,0.451,0.407	0|0:0:1,0,0	0|0:0.225:0.788,0.2,0.013	0|0:0.037:0.963,0.037,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.365:0.103,0.429,0.468	0|0:0.243:0.773,0.211,0.016	0|0:0:1,0,0	0|1:1.247:0.146,0.461,0.393	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.21:0.799,0.191,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.173:0.834,0.16,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.044:0.958,0.04,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.97,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.144:0.867,0.123,0.01	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.181:0.826,0.168,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.213:0.167,0.452,0.381	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.314:0.065,0.556,0.379	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.354:0.109,0.427,0.464	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.225:0.149,0.477,0.374	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.397:0.09,0.423,0.487	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.572:0.018,0.392,0.59	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.333:0.692,0.284,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.361:0.68,0.279,0.041	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.953:0.198,0.651,0.151	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.184:0.174,0.469,0.357	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.584:0.057,0.302,0.641	1|1:1.739:0.029,0.202,0.769	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.676:0.033,0.258,0.709	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.229:0.785,0.202,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.907:0.006,0.081,0.913	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.914:0.004,0.078,0.918	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.14:0.199,0.462,0.339	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0
+3	19011011	SNP-3.19009770.	C	A	.	PASS	AR2=0.962;DR2=0.97;AF=0.352	GT:DS:GP	0|0:0:1,0,0	1|1:1.818:0.009,0.165,0.827	0|1:1:0,1,0	1|1:1.826:0.006,0.161,0.833	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.852:0.006,0.136,0.858	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.947,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.751:0.381,0.487,0.132	0|0:0.142:0.863,0.133,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.881:0.004,0.11,0.886	1|1:2:0,0,1	0|0:0.329:0.716,0.24,0.044	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:0.366:0.643,0.347,0.009	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.225:0.784,0.207,0.009	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.85:0.008,0.134,0.858	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.608:0.449,0.493,0.058	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.786:0.013,0.188,0.799	1|1:1.722:0.021,0.235,0.743	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.264:0.747,0.242,0.011	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.592:0.045,0.318,0.637	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.812:0.355,0.478,0.167	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.928,0.071,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.118:0.885,0.111,0.003	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.825:0.346,0.483,0.171	1|1:1.864:0.005,0.127,0.868	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.947:0.003,0.046,0.951	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.835:0.346,0.473,0.181	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.748:0.026,0.2,0.774	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.854:0.006,0.134,0.86	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.61:0.508,0.373,0.118	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.944:0.001,0.054,0.945	0|0:0:1,0,0
+3	19015538	SNP-3.19014297.	A	G	.	PASS	AR2=0.993;DR2=0.994;AF=0.199	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.102:0.146,0.605,0.249	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.365:0.637,0.361,0.002	0|0:0.013:0.987,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.722:0.003,0.271,0.726	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19016872	SNP-3.19015631.	C	A	.	PASS	AR2=0.943;DR2=0.956;AF=0.299	GT:DS:GP	0|0:0:1,0,0	1|1:1.426:0.083,0.408,0.509	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.776:0.004,0.217,0.78	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.495:0.066,0.373,0.561	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.153:0.847,0.153,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.593:0.043,0.321,0.636	1|1:2:0,0,1	1|1:1.945:0.002,0.052,0.947	0|0:0:1,0,0	0|1:0.962:0.272,0.494,0.234	0|0:0:1,0,0	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.952:0,0.048,0.952	1|1:2:0,0,1	1|1:1.753:0.015,0.216,0.768	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.93:0.003,0.064,0.933	1|1:1.534:0.048,0.37,0.582	0|0:0:1,0,0	1|1:1.773:0.013,0.201,0.786	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.898:0.006,0.09,0.904	0|0:0:1,0,0	0|1:1.236:0.168,0.427,0.404	0|0:0:1,0,0	1|1:1.294:0.111,0.484,0.405	1|1:1.53:0.063,0.345,0.593	0|0:0:1,0,0	1|1:1.696:0.016,0.272,0.712	1|1:1.786:0.011,0.192,0.797	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.855:0.017,0.111,0.872	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.798:0.01,0.181,0.808	1|1:1.401:0.065,0.47,0.465	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.79:0.013,0.184,0.803	1|1:1.7:0.012,0.277,0.712	1|1:2:0,0,1	1|1:1.799:0.009,0.183,0.808	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.779:0.014,0.192,0.794	1|1:2:0,0,1	1|0:0.929:0.292,0.487,0.221	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.923:0.005,0.067,0.928	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.557:0.024,0.396,0.58	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.423:0.085,0.407,0.508	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.976:0.001,0.022,0.977	1|1:1.746:0.016,0.222,0.762	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.826:0.01,0.154,0.836	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.799:0.018,0.165,0.817	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.484:0.107,0.302,0.591	1|1:2:0,0,1	1|0:1.403:0.092,0.413,0.495	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19017621	SNP-3.19016380.	C	A	.	PASS	AR2=0.987;DR2=0.991;AF=0.365	GT:DS:GP	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.447:0.602,0.348,0.049	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.448:0.602,0.349,0.05	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.786:0.01,0.195,0.795	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.671:0.028,0.273,0.699	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.231:0.772,0.226,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.334:0.683,0.3,0.017	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.462:0.593,0.353,0.054	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19018686	SNP-3.19017445.	A	G	.	PASS	AR2=0.964;DR2=0.969;AF=0.327	GT:DS:GP	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:0.743:0.373,0.511,0.116	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:0.971:0.263,0.502,0.234	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.966:0.001,0.031,0.968	0|0:0.384:0.654,0.309,0.037	0|0:0:1,0,0	0|0:0.298:0.725,0.252,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.123:0.88,0.116,0.003	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:0.928:0.276,0.519,0.205	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1.334:0.088,0.49,0.422	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.941,0.058,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.361:0.668,0.303,0.029	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.169:0.837,0.157,0.006	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.135:0.867,0.132,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.902:0.292,0.513,0.194	0|1:1:0,1,0	1|1:1.903:0,0.096,0.903	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.979,0.021,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.185:0.823,0.169,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.051:0.233,0.484,0.284	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.421:0.61,0.359,0.031	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.982:0.258,0.502,0.24	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.256:0.762,0.22,0.018	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.948:0.278,0.496,0.226	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19018989	SNP-3.19017748.	C	A	.	PASS	AR2=0.978;DR2=0.983;AF=0.319	GT:DS:GP	0|0:0:1,0,0	1|1:1.984:0,0.016,0.984	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.89:0.005,0.1,0.895	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.923:0.002,0.073,0.925	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.93:0.001,0.067,0.932	1|1:2:0,0,1	0|1:0.882:0.303,0.513,0.185	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.787:0.004,0.206,0.79	1|1:1.91:0.005,0.081,0.915	0|0:0.471:0.577,0.376,0.047	1|1:2:0,0,1	0|0:0.618:0.43,0.523,0.048	1|0:0.689:0.403,0.505,0.092	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.904:0.185,0.727,0.088	1|1:1.941:0.001,0.057,0.942	0|0:0:1,0,0	1|1:1.933:0.001,0.064,0.935	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.153:0.032,0.784,0.184	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.971:0,0.028,0.971	1|0:1.046:0.06,0.835,0.105	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.359:0.114,0.413,0.473	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.932:0.001,0.065,0.934	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.027,0.973	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.953:0.001,0.044,0.955	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.965:0.001,0.034,0.966	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.991:0,0.009,0.991	0|0:0:1,0,0	1|1:1.816:0.002,0.18,0.818	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:1.977:0,0.022,0.978	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.977:0,0.022,0.978	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19019053	SNP-3.19017812.	C	A	.	PASS	AR2=0.99;DR2=0.993;AF=0.438	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.804:0.204,0.788,0.008	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.045:0.957,0.041,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.023:0.977,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0.019:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.46:0.067,0.407,0.526	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	1|0:1.171:0.005,0.819,0.176	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.967:0,0.033,0.967	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.877:0.142,0.839,0.019	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|1:1.339:0,0.661,0.339	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.824:0,0.176,0.824	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:0.98:0.026,0.968,0.006	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	1|0:1.349:0.012,0.627,0.361	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19019327	SNP-3.19018086.	C	A	.	PASS	AR2=0.987;DR2=0.99;AF=0.355	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.416:0.628,0.327,0.045	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.348:0.681,0.29,0.029	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.35:0.68,0.29,0.03	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.378:0.659,0.305,0.036	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.968:0,0.032,0.968	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.261:0.749,0.24,0.011	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.978:0,0.021,0.978	1|1:1.99:0,0.01,0.99	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.315:0.707,0.271,0.022	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.331:0.695,0.279,0.026	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.906:0.005,0.085,0.911	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19019901	SNP-3.19018660.	C	A	.	PASS	AR2=0.995;DR2=0.995;AF=0.393	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.915:0.001,0.084,0.916	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.148:0.179,0.494,0.327	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.896:0.324,0.456,0.22	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19020214	SNP-3.19018973.	C	A	.	PASS	AR2=0.973;DR2=0.979;AF=0.459	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.18:0.825,0.17,0.005	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.25:0.124,0.503,0.374	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.932,0.067,0.001	0|0:0.033:0.968,0.032,0	0|0:0.111:0.891,0.107,0.002	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.035:0.966,0.033,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.956,0.043,0	0|0:0.27:0.735,0.26,0.005	0|1:1.096:0.21,0.484,0.306	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.9:0.004,0.092,0.904	1|1:2:0,0,1	0|1:0.711:0.347,0.596,0.057	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.024:0.976,0.023,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.27:0.128,0.474,0.398	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.58:0.072,0.277,0.651	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0.066:0.934,0.065,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.33:0.083,0.503,0.414	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.081:0.921,0.077,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:1.385:0.087,0.442,0.471	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.389:0.085,0.442,0.474	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.943,0.056,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.891:0.013,0.084,0.903	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:1.235:0.141,0.482,0.377	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19021018	SNP-3.19019777.	C	A	.	PASS	AR2=0.89;DR2=0.922;AF=0.257	GT:DS:GP	0|0:0:1,0,0	0|0:0.038:0.963,0.037,0.001	0|1:0.983:0.252,0.513,0.235	0|0:0.078:0.925,0.072,0.003	0|0:0:1,0,0	0|1:0.992:0.262,0.483,0.254	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.439:0.073,0.415,0.512	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.378:0.096,0.43,0.474	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.747:0.418,0.416,0.166	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.623:0.041,0.295,0.664	1|1:1.514:0.048,0.39,0.562	1|1:1.268:0.127,0.478,0.395	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.343:0.102,0.453,0.445	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.949,0.051,0	1|1:2:0,0,1	1|0:0.894:0.297,0.512,0.191	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.477:0.583,0.358,0.059	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.558:0.523,0.395,0.081	0|0:0:1,0,0	0|0:0.553:0.521,0.405,0.074	0|0:0:1,0,0	1|0:0.716:0.408,0.469,0.124	1|0:0.967:0.289,0.456,0.256	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.818:0.329,0.523,0.148	0|0:0:1,0,0	0|1:0.459:0.543,0.455,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.969,0.031,0	0|0:0.031:0.97,0.03,0	0|0:0.051:0.95,0.049,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.965,0.035,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.521:0.106,0.266,0.628	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.547:0.476,0.5,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.614:0.045,0.296,0.659	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.548:0.073,0.305,0.622	1|0:1.255:0.114,0.517,0.369	0|0:0:1,0,0	0|1:1.197:0.155,0.493,0.352	0|0:0.56:0.522,0.396,0.082	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.328:0.686,0.299,0.014	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.188:0.209,0.394,0.397	0|0:0.388:0.703,0.207,0.091	0|1:1.21:0.176,0.438,0.386	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.047:0.954,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.567:0.517,0.399,0.084	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.633:0.041,0.285,0.674	1|1:1.622:0.044,0.29,0.666	0|1:1.366:0.113,0.408,0.479	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.596:0.499,0.406,0.095	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.953,0.046,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.067:0.935,0.063,0.002	0|0:0:1,0,0	1|1:2:0,0,1
+3	19021276	SNP-3.19020035.	A	G	.	PASS	AR2=0.909;DR2=0.928;AF=0.484	GT:DS:GP	1|0:1.07:0.227,0.477,0.297	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.488:0.065,0.382,0.553	1|1:1.638:0.04,0.283,0.677	1|1:1.573:0.046,0.334,0.619	1|1:2:0,0,1	0|1:1.254:0.098,0.549,0.352	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|1:0.954:0.267,0.512,0.221	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.31:0.12,0.45,0.43	1|1:1.663:0.034,0.269,0.697	1|1:1.365:0.091,0.454,0.456	1|1:2:0,0,1	1|1:1.696:0.03,0.244,0.726	1|1:2:0,0,1	1|1:1.563:0.052,0.333,0.615	1|1:2:0,0,1	1|1:1.592:0.049,0.311,0.64	0|1:1.322:0.089,0.499,0.411	0|0:0:1,0,0	1|1:1.845:0.007,0.141,0.852	1|1:1.878:0,0.121,0.878	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.384:0.093,0.429,0.478	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.14:0.194,0.473,0.333	1|1:1.8:0.022,0.157,0.821	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.791:0.361,0.487,0.152	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.704:0.03,0.237,0.734	1|1:2:0,0,1	0|0:0.701:0.419,0.46,0.121	1|1:2:0,0,1	1|1:1.647:0.038,0.276,0.686	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.27:0.737,0.255,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.379:0.639,0.343,0.018	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	1|0:0.937:0.278,0.507,0.215	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1.002:0.219,0.561,0.22	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.541:0.07,0.32,0.611	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.257:0.094,0.555,0.351	0|0:0.706:0.421,0.451,0.128	0|0:0.803:0.356,0.485,0.159	1|1:2:0,0,1	1|1:1.728:0.019,0.234,0.747	1|1:1.924:0.002,0.072,0.926	1|1:0.971:0.336,0.356,0.307	1|1:0.776:0.375,0.474,0.151	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.658:0.028,0.285,0.686	1|1:1.321:0.126,0.427,0.447	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.916:0.003,0.078,0.919	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.254:0.158,0.431,0.412	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1.27:0.134,0.462,0.404	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.218:0.122,0.539,0.339	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.39:0.098,0.414,0.488	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.631:0.036,0.296,0.668	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.941:0.002,0.056,0.942	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.646:0.039,0.276,0.685	1|0:0.752:0.386,0.475,0.138	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	19022831	SNP-3.19021590.	C	A	.	PASS	AR2=0.99;DR2=0.992;AF=0.348	GT:DS:GP	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0.145:0.862,0.131,0.007	0|0:0.076:0.926,0.073,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.106:0.903,0.087,0.01	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.096:0.906,0.091,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.859:0.007,0.126,0.867	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.514:0.066,0.355,0.579	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.026,0.973	1|1:1.978:0,0.021,0.978	1|1:1.86:0.007,0.127,0.867	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.855:0.007,0.131,0.862	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.943:0.001,0.055,0.944	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.072:0.93,0.068,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.903:0.002,0.093,0.905	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.975,0.025,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.925:0.002,0.072,0.926	1|1:2:0,0,1	1|1:1.964:0.001,0.034,0.965	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.823:0.012,0.153,0.835	1|1:1.975:0,0.025,0.975	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19029066	SNP-3.19027825.	A	G	.	PASS	AR2=0.888;DR2=0.91;AF=0.369	GT:DS:GP	0|1:1.333:0.12,0.426,0.453	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.115:0.198,0.49,0.312	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.252:0.138,0.471,0.391	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.169:0.188,0.454,0.357	0|1:1.054:0.228,0.489,0.283	1|0:1.118:0.196,0.491,0.313	1|1:1.38:0.104,0.412,0.484	1|0:1.114:0.2,0.486,0.314	0|1:1.109:0.199,0.493,0.308	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.588:0.044,0.324,0.632	1|1:1.685:0.024,0.266,0.709	1|0:1.371:0.116,0.397,0.487	1|1:1.294:0.117,0.471,0.412	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|0:1.433:0.071,0.426,0.504	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:1.694:0.026,0.255,0.72	1|1:1.694:0.023,0.26,0.717	1|1:1.645:0.005,0.345,0.65	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.5:0.056,0.388,0.556	1|1:1.05:0.232,0.486,0.282	0|0:0:1,0,0	1|1:1.702:0.023,0.252,0.725	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.708:0.021,0.25,0.729	1|1:2:0,0,1	0|1:1.328:0.119,0.434,0.447	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.753:0.015,0.216,0.768	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.396:0.076,0.452,0.472	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.488:0.08,0.353,0.568	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.708:0.022,0.247,0.73	0|0:0:1,0,0	1|1:1.757:0.016,0.211,0.773	0|1:1.034:0.237,0.492,0.271	1|0:1.022:0.245,0.488,0.267	1|0:1.064:0.231,0.473,0.295	1|1:2:0,0,1	1|0:0.728:0.354,0.564,0.082	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.172:0.143,0.542,0.315	0|0:0:1,0,0	1|0:1.083:0.214,0.489,0.297	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.145:0.183,0.489,0.328	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.615:0.046,0.294,0.661	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.687:0.025,0.263,0.712	1|1:1.753:0.017,0.213,0.77	1|1:1.98:0,0.019,0.98	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.29:0.12,0.47,0.41	1|0:0.832:0.311,0.547,0.142	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.338:0.103,0.457,0.441	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.424:0.086,0.404,0.51	1|1:1.717:0.021,0.242,0.738	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.087:0.213,0.488,0.299	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.045:0.234,0.487,0.279	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.045:0.234,0.487,0.279	0|1:1.044:0.234,0.488,0.278	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:1.993:0,0.007,0.993	1|1:1.666:0.028,0.279,0.694	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.192:0.169,0.469,0.362	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.392:0.1,0.408,0.492	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.925:0.002,0.072,0.926	0|0:0:1,0,0	1|1:2:0,0,1
+3	19033441	SNP-3.19032200.	C	A	.	PASS	AR2=0.972;DR2=0.98;AF=0.44	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.059:0.942,0.057,0.001	0|0:0.045:0.955,0.044,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.06:0.941,0.058,0.001	1|1:1.197:0.176,0.451,0.373	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.273:0.132,0.462,0.405	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.255:0.147,0.45,0.403	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.094:0.907,0.092,0.001	0|0:0:1,0,0	1|0:0.773:0.321,0.586,0.094	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:0.693:0.336,0.635,0.029	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.399:0.135,0.331,0.534	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.289:0.131,0.449,0.42	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.343:0.112,0.432,0.455	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.973:0,0.026,0.974	1|0:1.331:0.116,0.437,0.447	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.521:0.063,0.354,0.583	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19033520	SNP-3.19032279.	A	G	.	PASS	AR2=0.924;DR2=0.947;AF=0.489	GT:DS:GP	1|1:1.668:0.03,0.272,0.698	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.917:0.003,0.078,0.92	1|1:1.982:0,0.017,0.982	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	0|1:0.636:0.466,0.433,0.101	1|1:1.992:0,0.008,0.992	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.985:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.223:0,0.777,0.223	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.873:0.005,0.117,0.878	1|1:1.59:0.045,0.32,0.635	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.599:0.491,0.42,0.09	1|1:2:0,0,1	1|1:1.711:0.02,0.249,0.731	0|1:1.397:0.095,0.414,0.492	0|0:0:1,0,0	1|1:1.833:0.006,0.156,0.839	0|1:0.715:0.414,0.456,0.129	1|1:1.888:0.003,0.106,0.891	1|1:2:0,0,1	0|1:1.214:0.091,0.603,0.306	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.713:0.416,0.456,0.129	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.867:0.005,0.124,0.871	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.745:0.395,0.466,0.139	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.867:0.005,0.124,0.872	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.171:0.118,0.592,0.289	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.676:0.438,0.448,0.114	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.412:0.646,0.297,0.058	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.652:0.454,0.439,0.107	1|1:2:0,0,1	0|0:0.636:0.47,0.423,0.107	1|1:2:0,0,1	1|1:1.533:0.047,0.373,0.58	1|0:0.715:0.415,0.456,0.129	0|0:0:1,0,0	1|1:1.763:0.009,0.219,0.772	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.823:0.008,0.16,0.832	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|0:1.444:0.005,0.546,0.449	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.152:0,0.848,0.152	1|1:1.911:0.002,0.084,0.914	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.987:0,0.013,0.987	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.859:0.005,0.131,0.864	0|0:0.634:0.472,0.421,0.106	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.831:0.007,0.154,0.839	1|1:2:0,0,1	0|1:1.301:0.048,0.604,0.349	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.661:0.449,0.441,0.11	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:1.885:0.004,0.107,0.889	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.428:0.628,0.316,0.056	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.35:0.108,0.434,0.458	1|1:1.849:0.006,0.138,0.855	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.988:0,0.011,0.988	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.297:0.737,0.229,0.034	0|1:0.43:0.608,0.354,0.038	1|1:1.831:0.007,0.154,0.839	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.852:0.007,0.134,0.859	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.941:0.003,0.052,0.944	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.709:0.055,0.181,0.764	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.442:0.621,0.316,0.063	1|1:2:0,0,1	1|1:1.866:0.006,0.121,0.873
+3	19034694	SNP-3.19033453.	A	G	.	PASS	AR2=0.957;DR2=0.968;AF=0.318	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.952:0.001,0.046,0.953	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.447:0.604,0.346,0.051	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.864:0.009,0.118,0.873	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.509:0.105,0.282,0.614	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.482:0.573,0.373,0.055	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.917:0.003,0.077,0.92	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.016:0.984,0.016,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.147:0.012,0.829,0.159	0|0:0:1,0,0	0|0:0.135:0.872,0.12,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.044:0.956,0.043,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.323:0.71,0.257,0.033	0|1:0.883:0.279,0.559,0.162	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.206:0.81,0.173,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.82:0.373,0.435,0.193	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.633:0.498,0.372,0.13	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.561:0.538,0.362,0.099	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.631:0.031,0.307,0.662	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.947,0.049,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.923:0.002,0.073,0.925	1|1:1.917:0.002,0.079,0.919	1|1:1.955:0.001,0.042,0.957	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.452:0.604,0.34,0.056	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.858:0.003,0.136,0.861	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0.392:0.647,0.313,0.039	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.493:0.571,0.365,0.064	0|0:0:1,0,0	1|1:1.307:0.124,0.445,0.431	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.454:0.627,0.292,0.081	0|0:0:1,0,0
+3	19034859	SNP-3.19033618.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.363	GT:DS:GP	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0.044:0.956,0.044,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.052:0.949,0.051,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:1.996:0,0.004,0.996	0|0:0.034:0.966,0.033,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.026:0.974,0.025,0	0|0:0.026:0.974,0.025,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.97,0.03,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.954,0.046,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.03:0.971,0.029,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.037:0.964,0.035,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.032:0.969,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19038189	SNP-3.19036948.	A	G	.	PASS	AR2=0.982;DR2=0.986;AF=0.488	GT:DS:GP	1|1:1.934:0.001,0.064,0.935	0|0:0:1,0,0	1|1:1.768:0.012,0.209,0.779	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.445:0.062,0.431,0.507	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.093:0.908,0.091,0.001	1|1:1.804:0.01,0.176,0.814	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.739:0.016,0.23,0.755	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.778:0.012,0.197,0.79	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:1.96:0.001,0.038,0.961	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.034:0.966,0.034,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	0|1:0.7:0.322,0.655,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.963:0.038,0.961,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.835:0.01,0.145,0.845	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.872:0.006,0.116,0.878	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.993:0,0.006,0.994	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.971:0,0.029,0.971	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.746:0.014,0.225,0.76	0|0:0:1,0,0	1|1:1.851:0.006,0.136,0.857	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.803:0.012,0.173,0.815	1|1:1.62:0.034,0.312,0.654	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.958:0.001,0.04,0.959	1|1:1.694:0.014,0.279,0.708	1|1:1.712:0.021,0.247,0.732	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.928:0.001,0.069,0.93	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.006,0.994	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.006,0.994	1|1:1.941:0.002,0.055,0.943	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.993:0,0.006,0.994	0|0:0:1,0,0	1|1:2:0,0,1
+3	19038303	SNP-3.19037062.	C	A	.	PASS	AR2=0.937;DR2=0.947;AF=0.315	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.866:0.006,0.122,0.872	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.679:0.436,0.448,0.115	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.68:0.436,0.449,0.116	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.695:0.427,0.452,0.121	0|0:0.674:0.439,0.447,0.114	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.679:0.436,0.448,0.115	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.733:0.027,0.212,0.761	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.043:0.959,0.039,0.002	1|1:1.848:0.005,0.141,0.854	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.8:0.01,0.181,0.81	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.666:0.036,0.261,0.702	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.681:0.435,0.449,0.116	1|0:0.681:0.435,0.449,0.116	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.787:0.376,0.461,0.163	1|1:1.838:0.009,0.143,0.848	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.679:0.436,0.448,0.115	0|0:0.695:0.427,0.452,0.121	0|0:0.024:0.976,0.023,0	1|0:0.679:0.436,0.448,0.115	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.679:0.436,0.448,0.115	0|0:0.679:0.436,0.448,0.115	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.86:0.008,0.124,0.868	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.204:0.796,0.204,0	0|0:0:1,0,0	1|0:0.679:0.436,0.448,0.115	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.679:0.436,0.448,0.115	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.679:0.436,0.448,0.115	1|0:0.679:0.436,0.448,0.115	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.672:0.441,0.446,0.113	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.684:0.433,0.45,0.117	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.866:0.001,0.132,0.867	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.68:0.436,0.449,0.116	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.299:0.746,0.208,0.045	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19039014	SNP-3.19037773.	C	A	.	PASS	AR2=0.927;DR2=0.946;AF=0.314	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.535:0.056,0.354,0.591	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.254:0.762,0.221,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0.323:0.714,0.248,0.037	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.217:0.792,0.2,0.009	0|0:0:1,0,0	0|0:0.234:0.78,0.205,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.602:0.05,0.298,0.652	1|1:2:0,0,1	1|1:1.825:0.009,0.158,0.834	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.249:0.222,0.307,0.471	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.765:0.031,0.173,0.796	0|0:0:1,0,0	1|1:1.624:0.023,0.33,0.647	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	1|1:1.715:0.019,0.248,0.734	0|0:0.001:0.999,0.001,0	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.615:0.047,0.292,0.662	0|1:1:0,1,0	1|1:1.909:0.006,0.079,0.915	1|1:1.36:0.101,0.437,0.461	0|0:0.24:0.775,0.21,0.015	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.709:0.023,0.245,0.732	0|0:0.237:0.778,0.207,0.015	1|1:1.621:0.033,0.313,0.654	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.528:0.059,0.353,0.588	0|0:0:1,0,0	1|1:1.678:0.016,0.289,0.694	1|1:2:0,0,1	0|0:0.239:0.776,0.209,0.015	0|0:0.239:0.776,0.209,0.015	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.618:0.527,0.329,0.145	1|1:2:0,0,1	1|1:1.762:0.015,0.207,0.777	1|1:2:0,0,1	1|1:1.802:0.015,0.169,0.816	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.81:0.009,0.173,0.818	1|1:1.681:0.033,0.254,0.714	1|1:2:0,0,1	1|1:1.658:0.038,0.265,0.697	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.761:0.015,0.208,0.777	1|1:1.767:0.015,0.204,0.782	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.906:0.01,0.073,0.917	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.666:0.026,0.282,0.692	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.985:0,0.015,0.985	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.727:0.017,0.24,0.743	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.555:0.06,0.326,0.615	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.962:0.002,0.035,0.963	0|0:0:1,0,0	0|0:0.34:0.696,0.268,0.036	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.294:0.23,0.246,0.524	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.836:0.012,0.14,0.848	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.8:0.008,0.184,0.808	1|1:2:0,0,1	1|1:1.583:0.052,0.313,0.635	1|1:1.757:0.016,0.212,0.773	0|0:0.234:0.78,0.205,0.015	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19041315	SNP-3.19040074.	C	A	.	PASS	AR2=1;DR2=1;AF=0.354	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:1.998:0,0.002,0.998	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.004:0.996,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19043574	SNP-3.19042333.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.353	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.96,0.039,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.653:0.075,0.198,0.728	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.755:0.039,0.168,0.793	0|0:0:1,0,0
+3	19044516	SNP-3.19043275.	A	G	.	PASS	AR2=0.996;DR2=0.996;AF=0.514	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.923:0.002,0.074,0.924	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.897:0.003,0.097,0.9	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.92:0.002,0.076,0.922	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.933:0.001,0.064,0.934	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.922:0.002,0.075,0.924	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.031:0.969,0.03,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.906:0.002,0.089,0.909	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.923:0.002,0.074,0.924	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.906:0.003,0.088,0.909	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.902:0.004,0.091,0.906	1|1:1.904:0.003,0.091,0.907	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	19045129	SNP-3.19043888.	C	A	.	PASS	AR2=0.998;DR2=0.999;AF=0.361	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.933,0.067,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.117:0.886,0.11,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.091:0.911,0.087,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.089:0.913,0.086,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19046131	SNP-3.19044890.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.203	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.136:0.869,0.127,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19046856	SNP-3.19045615.	C	A	.	PASS	AR2=0.978;DR2=0.978;AF=0.418	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.027:0.973,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.947:0.278,0.496,0.226	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:0.99:0.253,0.504,0.243	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.99:0.253,0.504,0.243	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.99:0.253,0.504,0.243	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.995:0.251,0.504,0.246	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.99:0.253,0.504,0.243	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:0.977:0.262,0.499,0.239	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.99:0.253,0.504,0.243	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.99:0.253,0.504,0.243	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.99:0.253,0.504,0.243	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19046904	SNP-3.19045663.	A	G	.	PASS	AR2=0.987;DR2=0.989;AF=0.235	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.675:0.438,0.449,0.113	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.744:0.393,0.47,0.137	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.744:0.393,0.47,0.137	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.742:0.396,0.466,0.138	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19046950	SNP-3.19045709.	C	A	.	PASS	AR2=0.982;DR2=0.983;AF=0.415	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.067:0.939,0.056,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.959:0.271,0.499,0.23	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.959:0.271,0.499,0.23	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.959:0.271,0.499,0.23	1|1:2:0,0,1	0|0:0.485:0.518,0.479,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:0.959:0.271,0.499,0.23	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.959:0.271,0.499,0.23	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.959:0.271,0.499,0.23	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.959:0.271,0.499,0.23	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19049058	SNP-3.19047817.	C	A	.	PASS	AR2=1;DR2=1;AF=0.331	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.96,0.04,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19049571	SNP-3.19048330.	C	A	.	PASS	AR2=0.961;DR2=0.966;AF=0.434	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.221:0.79,0.2,0.011	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.221:0.794,0.191,0.015	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.075:0.926,0.074,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.142:0.865,0.128,0.007	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.448:0.628,0.295,0.077	0|0:0:1,0,0	0|0:0.108:0.898,0.097,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.017,0	0|0:0:1,0,0	0|0:0.053:0.947,0.052,0.001	0|0:0:1,0,0	1|0:0.901:0.3,0.499,0.201	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.082:0.921,0.076,0.003	0|1:0.863:0.323,0.49,0.186	0|0:0.017:0.983,0.017,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.943,0.056,0.001	1|1:2:0,0,1	0|0:0.859:0.329,0.484,0.188	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0.457:0.563,0.416,0.02	0|0:0.386:0.632,0.349,0.018	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.476:0.535,0.455,0.011	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:0.897:0.305,0.494,0.201	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.044:0.956,0.043,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.901:0.3,0.499,0.201	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.105:0.898,0.098,0.003	0|0:0.239:0.786,0.188,0.026	0|0:0:1,0,0	0|0:0.115:0.891,0.103,0.006	0|0:0.35:0.691,0.267,0.042	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.144:0.86,0.137,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.097:0.906,0.091,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.901:0.3,0.499,0.201	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.046:0.955,0.045,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.901:0.3,0.499,0.201	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.897:0.305,0.494,0.201	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.034,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.901:0.3,0.499,0.201	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19050988	SNP-3.19049747.	C	A	.	PASS	AR2=0.973;DR2=0.974;AF=0.418	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.041:0.96,0.039,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.048:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.964,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.896:0.303,0.499,0.199	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.959,0.04,0.001	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:0.896:0.303,0.499,0.199	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.939:0.284,0.492,0.224	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.896:0.303,0.499,0.199	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.016,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.477:0.528,0.466,0.006	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.888:0.309,0.493,0.198	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.101:0.224,0.451,0.325	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.853:0.331,0.486,0.183	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.896:0.303,0.499,0.199	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.939:0.284,0.492,0.224	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.853:0.331,0.486,0.183	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.888:0.309,0.493,0.198	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19052901	SNP-3.19051660.	C	A	.	PASS	AR2=0.96;DR2=0.972;AF=0.457	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.037:0.963,0.036,0.001	0|0:0.029:0.972,0.028,0	0|0:0.064:0.937,0.062,0.001	0|0:0.046:0.954,0.045,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.083:0.919,0.079,0.002	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1.244:0.13,0.497,0.374	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.97,0.03,0.001	0|0:0.039:0.962,0.038,0	1|0:1:0,1,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.955,0.044,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.931,0.068,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.094:0.908,0.09,0.002	0|0:0.034:0.966,0.034,0	0|0:0:1,0,0	1|0:1.307:0.105,0.483,0.412	0|0:0:1,0,0	1|1:1.523:0.057,0.362,0.581	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.03:0.97,0.029,0.001	0|0:0:1,0,0	1|1:1.523:0.057,0.362,0.581	0|0:0.006:0.995,0.005,0	0|0:0.057:0.944,0.055,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.988,0.012,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:0.781:0.257,0.706,0.038	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.523:0.057,0.362,0.581	1|1:2:0,0,1	0|0:0.027:0.974,0.026,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.523:0.057,0.362,0.581	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.523:0.057,0.362,0.581	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.523:0.057,0.362,0.581	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.029:0.972,0.028,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.523:0.057,0.362,0.581	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.523:0.057,0.362,0.581	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.523:0.057,0.362,0.581	0|0:0:1,0,0	0|0:0.051:0.949,0.05,0.001	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1.523:0.057,0.362,0.581	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.523:0.057,0.362,0.581	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.023,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.523:0.057,0.362,0.581	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.523:0.057,0.362,0.581	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19053056	SNP-3.19051815.	A	G	.	PASS	AR2=0.982;DR2=0.986;AF=0.259	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.956:0.001,0.043,0.957	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.292:0.731,0.246,0.023	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.941:0.002,0.055,0.943	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.229:0.784,0.203,0.013	1|1:2:0,0,1	1|1:1.955:0.001,0.044,0.955	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.23:0.783,0.204,0.013	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	1|1:1.864:0.005,0.127,0.869	0|0:0:1,0,0	0|1:1:0,1,0	1|0:0.899:0.171,0.758,0.07	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.977:0,0.023,0.977	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.198:0.812,0.177,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.889:0.004,0.102,0.893	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.981:0,0.019,0.981	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.423:0.623,0.33,0.047	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.838:0.009,0.144,0.847	0|0:0:1,0,0	1|1:1.868:0.005,0.122,0.873	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.843:0.006,0.146,0.849	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.769:0.014,0.203,0.783	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.229:0.784,0.203,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19062082	SNP-3.19060841.	C	A	.	PASS	AR2=0.997;DR2=0.998;AF=0.343	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:1.995:0,0.005,0.995	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.914:0.002,0.082,0.916	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:1.986:0,0.014,0.986	1|1:1.921:0.002,0.075,0.923	1|1:1.963:0.001,0.035,0.964	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0.071:0.931,0.068,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.191:0.839,0.13,0.031	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19065499	SNP-3.19064258.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.355	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.098:0.912,0.077,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.015:0.985,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.015:0.985,0.014,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.015:0.985,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19065690	SNP-3.19064449.	C	A	.	PASS	AR2=0.961;DR2=0.968;AF=0.308	GT:DS:GP	0|0:0:1,0,0	1|1:1.771:0.005,0.219,0.776	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.676:0.025,0.275,0.7	1|1:2:0,0,1	1|1:1.521:0.08,0.319,0.601	1|1:1.649:0.034,0.283,0.683	1|1:1.658:0.028,0.285,0.687	1|1:1.869:0.005,0.12,0.875	0|0:0:1,0,0	1|1:1.934:0.002,0.062,0.936	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.848:0.01,0.132,0.858	1|1:1.805:0.012,0.171,0.817	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.5:0.043,0.415,0.542	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.654:0.032,0.281,0.686	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.739:0.015,0.231,0.754	0|0:0:1,0,0	1|1:1.847:0.006,0.14,0.854	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.725:0.016,0.243,0.741	1|1:1.627:0.036,0.3,0.664	1|1:1.643:0.034,0.289,0.677	1|1:1.652:0.035,0.279,0.687	1|1:1.852:0.007,0.135,0.859	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.944:0.002,0.053,0.945	1|1:1.927:0.002,0.068,0.93	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.855:0.007,0.131,0.862	1|1:2:0,0,1	1|1:1.797:0.011,0.181,0.808	1|1:1.842:0.008,0.142,0.85	1|1:1.843:0.006,0.145,0.849	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.694:0.03,0.246,0.724	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.653:0.039,0.27,0.692	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.81:0.007,0.176,0.817	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.886:0.008,0.097,0.894	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.859:0.006,0.13,0.864	0|0:0:1,0,0	1|1:1.82:0.009,0.162,0.829	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.94:0.002,0.056,0.942	1|1:2:0,0,1	1|1:1.811:0.016,0.157,0.827	1|1:2:0,0,1	1|1:1.89:0.005,0.101,0.895	1|1:2:0,0,1	1|1:1.875:0.005,0.116,0.879	1|1:1.875:0.005,0.116,0.879	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.86:0.006,0.128,0.866	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19076909	SNP-3.19075668.	C	A	.	PASS	AR2=0.991;DR2=0.992;AF=0.344	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.866:0.006,0.123,0.871	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.877:0.005,0.113,0.882	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.757:0.038,0.167,0.795	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.015:0.985,0.015,0	1|1:1.883:0.003,0.111,0.886	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.879:0.003,0.116,0.882	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.905:0.003,0.089,0.908	1|1:2:0,0,1	0|0:0.054:0.947,0.052,0.001	0|0:0.022:0.978,0.022,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.027:0.973,0.026,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.953:0,0.046,0.953	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.944:0.001,0.054,0.945	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.927:0.003,0.066,0.93	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.916:0.002,0.08,0.918	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0.166:0.841,0.152,0.007	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0.022:0.978,0.022,0	1|1:1.899:0.005,0.092,0.904	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.932:0.001,0.066,0.933	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:1.968:0.001,0.031,0.968	1|1:1.975:0,0.024,0.975	0|1:1:0,1,0	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.902:0.004,0.089,0.907	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19077956	SNP-3.19076715.	A	G	.	PASS	AR2=0.948;DR2=0.953;AF=0.32	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.023:0.295,0.387,0.318	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.926:0.278,0.518,0.204	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.596:0.473,0.458,0.069	1|1:2:0,0,1	1|0:1.092:0.208,0.492,0.3	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.296:0.728,0.248,0.024	0|1:1.129:0.191,0.488,0.321	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.048:0.229,0.495,0.277	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.066:0.936,0.062,0.002	0|0:0.966:0.281,0.472,0.247	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.546:0.49,0.474,0.036	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.946,0.053,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.092:0.207,0.494,0.299	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0.034:0.967,0.032,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.094:0.206,0.494,0.3	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.13:0.191,0.488,0.321	1|0:1.1:0.204,0.493,0.303	1|1:2:0,0,1	1|1:1.126:0.193,0.489,0.319	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.069:0.216,0.498,0.285	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.124:0.894,0.088,0.018	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.069:0.216,0.498,0.285	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.126:0.874,0.126,0	1|1:2:0,0,1	0|1:1.094:0.206,0.494,0.3	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.073:0.215,0.498,0.288	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.13:0.191,0.488,0.321	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.118:0.891,0.1,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.093:0.208,0.492,0.3	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19079194	SNP-3.19077953.	A	G	.	PASS	AR2=0.981;DR2=0.984;AF=0.509	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.946:0.001,0.053,0.947	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:1.964:0.001,0.034,0.965	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.962:0.001,0.036,0.963	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.027,0.973	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	1|1:1.926:0.006,0.062,0.932	1|1:1.803:0.009,0.179,0.812	1|1:2:0,0,1	1|1:1.915:0.002,0.082,0.916	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.829:0.009,0.153,0.838	1|1:2:0,0,1	1|1:1.862:0.008,0.121,0.871	0|0:0:1,0,0	1|1:1.716:0.021,0.241,0.738	1|1:1.853:0.004,0.14,0.856	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.824:0.01,0.157,0.834	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.935:0.001,0.062,0.936	1|1:1.796:0.011,0.181,0.808	1|1:2:0,0,1	1|1:1.939:0.002,0.058,0.94	1|1:2:0,0,1	1|1:1.822:0.006,0.166,0.828	1|1:2:0,0,1	0|1:0.934:0.114,0.838,0.048	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.537:0.038,0.386,0.576	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.932:0.002,0.065,0.933	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.92:0.112,0.855,0.033	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.84:0.01,0.14,0.85	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.834:0.006,0.153,0.841	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.979:0,0.02,0.979	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.879:0.004,0.113,0.883	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.945:0.001,0.052,0.946	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.958:0.001,0.04,0.959	1|1:1.967:0,0.032,0.967	1|1:1.95:0.001,0.047,0.952	1|1:1.772:0.001,0.226,0.773	1|1:1.925:0.002,0.072,0.926	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.916:0.002,0.08,0.918	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.875:0.003,0.119,0.878	1|1:1.818:0.011,0.161,0.829	1|1:1.828:0.007,0.159,0.834	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.967:0,0.032,0.967	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.866:0.008,0.118,0.874	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	19085363	SNP-3.19084122.	A	G	.	PASS	AR2=0.991;DR2=0.992;AF=0.264	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.963:0,0.036,0.963	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.949:0,0.05,0.95	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.896:0.003,0.098,0.899	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.128:0.876,0.12,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.132:0.874,0.12,0.006	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0.102:0.901,0.096,0.003	0|0:0.088:0.916,0.08,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.123:0.881,0.115,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.121:0.882,0.115,0.003	0|0:0:1,0,0	1|1:1.938:0.002,0.059,0.939	0|0:0.081:0.921,0.078,0.002	0|0:0.125:0.88,0.114,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.164:0.844,0.149,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.934,0.065,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.041:0.959,0.04,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.971,0.029,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.887:0.003,0.106,0.891	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19086741	SNP-3.19085500.	A	G	.	PASS	AR2=0.952;DR2=0.959;AF=0.468	GT:DS:GP	0|1:1.359:0.069,0.503,0.428	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.877:0.005,0.114,0.882	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.873:0.008,0.111,0.881	1|1:2:0,0,1	1|1:1.871:0.006,0.117,0.877	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.865:0.006,0.123,0.871	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:1.944:0.001,0.054,0.945	0|0:0:1,0,0	1|1:1.875:0.007,0.112,0.882	1|1:2:0,0,1	1|1:1.83:0.011,0.148,0.841	1|1:1.918:0.004,0.075,0.921	1|1:1.889:0.005,0.101,0.894	1|1:1.964:0,0.036,0.964	1|1:1.978:0,0.021,0.979	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.908:0.003,0.086,0.911	1|1:2:0,0,1	1|1:1.75:0.015,0.221,0.765	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.74:0.014,0.232,0.754	1|1:1.716:0.024,0.236,0.74	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.358:0.078,0.486,0.436	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.264:0.101,0.533,0.365	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.711:0.019,0.251,0.73	1|1:1.305:0.083,0.53,0.387	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.685:0.028,0.258,0.714	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.777:0.013,0.198,0.789	1|0:1.66:0.028,0.284,0.688	0|1:1.036:0.251,0.462,0.287	0|1:0.861:0.15,0.838,0.011	1|0:0.851:0.156,0.838,0.007	1|1:1.802:0.009,0.179,0.812	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.911:0.127,0.836,0.037	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.788:0.011,0.191,0.798	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.951:0.001,0.047,0.952	1|1:1.83:0.009,0.152,0.839	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.975:0,0.025,0.975	0|0:0:1,0,0	1|1:1.933:0.001,0.064,0.935	1|1:1.854:0.01,0.125,0.865	1|1:2:0,0,1	1|1:1.784:0.014,0.187,0.798	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.811:0.01,0.168,0.821	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.951:0.001,0.047,0.952	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.971:0,0.028,0.971	1|1:1.898:0.004,0.094,0.902	1|1:1.885:0.003,0.109,0.888	1|1:1.886:0.004,0.105,0.89	1|0:1.27:0.029,0.673,0.299	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.772:0.017,0.194,0.789	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.727:0.018,0.237,0.745	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.948:0,0.051,0.948	1|1:1.79:0.008,0.195,0.797	1|1:2:0,0,1	1|0:1.692:0.018,0.273,0.71	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.708:0.027,0.237,0.735	1|1:1.747:0.032,0.189,0.779	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.946:0.001,0.052,0.947	1|1:1.932:0.002,0.064,0.934	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.807:0.011,0.171,0.818	1|1:1.807:0.013,0.168,0.82	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.908:0.003,0.085,0.912	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.688:0.027,0.257,0.716	1|1:1.668:0.03,0.272,0.698	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.823:0.003,0.171,0.826	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	19087267	SNP-3.19086026.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.249	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.121:0.882,0.115,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19087338	SNP-3.19086097.	C	A	.	PASS	AR2=0.979;DR2=0.983;AF=0.448	GT:DS:GP	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.968,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.302:0.121,0.456,0.423	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.958,0.041,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1.239:0.145,0.471,0.384	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.927,0.069,0.003	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.379:0.106,0.408,0.486	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.408:0.598,0.395,0.007	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.078:0.923,0.076,0.001	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.283:0.131,0.455,0.414	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.295:0.128,0.45,0.423	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.947,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.284:0.131,0.455,0.414	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1.043:0.215,0.526,0.258	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0
+3	19087621	SNP-3.19086380.	C	A	.	PASS	AR2=0.986;DR2=0.988;AF=0.343	GT:DS:GP	0|0:0.014:0.986,0.014,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.153:0.847,0.153,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0.074:0.928,0.07,0.002	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.958,0.041,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.075:0.928,0.07,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.067:0.935,0.063,0.002	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0.078:0.924,0.074,0.002	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.96,0.04,0	0|0:0:1,0,0	0|0:0.049:0.951,0.049,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.718:0.045,0.193,0.763	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.543:0.612,0.234,0.154	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.071:0.931,0.067,0.002	1|1:2:0,0,1	0|0:0.03:0.97,0.029,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.071:0.931,0.067,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.071:0.931,0.067,0.002	0|0:0.071:0.931,0.067,0.002	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.071:0.931,0.067,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.934,0.064,0.002	0|0:0:1,0,0	0|0:0.067:0.935,0.063,0.002	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0.074:0.928,0.07,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.976:0,0.024,0.976	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.956,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.931,0.067,0.002	0|0:0.074:0.928,0.07,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.067:0.935,0.063,0.002	0|0:0.004:0.996,0.004,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	0|0:0.07:0.932,0.066,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.067:0.935,0.063,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.067:0.935,0.063,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0.068:0.934,0.064,0.002	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19089509	SNP-3.19088268.	A	G	.	PASS	AR2=0.869;DR2=0.902;AF=0.241	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.577:0.133,0.157,0.71	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.207:0.807,0.178,0.015	0|0:0:1,0,0	0|0:0.508:0.568,0.357,0.076	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.265:0.753,0.229,0.018	0|0:0.541:0.538,0.383,0.079	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.32:0.707,0.265,0.028	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.258:0.761,0.221,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	1|0:0.886:0.115,0.884,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.513:0.557,0.372,0.07	0|0:0.542:0.532,0.393,0.075	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.599:0.493,0.415,0.092	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.152:0.181,0.486,0.333	0|0:0.519:0.552,0.377,0.071	0|0:0:1,0,0	0|1:1.104:0.099,0.697,0.204	0|0:0:1,0,0	1|1:1.196:0.159,0.485,0.356	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.136:0.87,0.125,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.668:0.439,0.454,0.107	0|0:0:1,0,0	0|0:0.61:0.486,0.418,0.096	0|0:0.425:0.623,0.329,0.048	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.83:0.318,0.535,0.147	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.183:0.827,0.164,0.009	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.299:0.749,0.203,0.048	0|0:0:1,0,0	1|1:1.103:0.201,0.495,0.304	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:1.155:0.18,0.485,0.335	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.183:0.166,0.484,0.349	0|0:0:1,0,0	0|0:0.433:0.621,0.324,0.054	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.155:0.18,0.485,0.335	1|1:1.18:0.167,0.485,0.348	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.147:0.184,0.485,0.331	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.114:0.889,0.109,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.64:0.46,0.439,0.1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.515:0.553,0.379,0.068	0|0:0:1,0,0	0|0:0.03:0.97,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.188:0.163,0.487,0.351	0|0:0.003:0.997,0.003,0	1|0:0.767:0.408,0.418,0.174	0|0:0.05:0.952,0.046,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.222:0.791,0.195,0.013	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.566:0.516,0.403,0.081	1|1:1.18:0.168,0.485,0.348	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.619:0.477,0.428,0.096	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.778:0.342,0.539,0.12	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.519:0.55,0.381,0.069	0|0:0.568:0.515,0.402,0.083	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.97,0.029,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.53:0.542,0.386,0.072	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.419:0.635,0.312,0.054	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.969,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.574:0.51,0.406,0.084
+3	19092918	SNP-3.19091677.	C	A	.	PASS	AR2=0.983;DR2=0.988;AF=0.357	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.987:0,0.013,0.987	1|1:1.876:0.004,0.116,0.88	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.888:0.004,0.105,0.892	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.406:0.637,0.319,0.044	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.955:0.001,0.043,0.956	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.974:0,0.026,0.974	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.284:0.736,0.243,0.02	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.908:0.004,0.085,0.911	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.294:0.728,0.25,0.022	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.868:0.005,0.121,0.874	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:1.834:0.008,0.15,0.842	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.915:0.003,0.079,0.918	1|1:1.885:0.005,0.106,0.89	0|0:0:1,0,0	0|0:0.284:0.737,0.243,0.02	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.278:0.327,0.067,0.605	0|0:0:1,0,0
+3	19095009	SNP-3.19093768.	A	G	.	PASS	AR2=0.949;DR2=0.963;AF=0.295	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.108:0.893,0.106,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.947,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:0.678:0.437,0.448,0.115	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.665:0.446,0.443,0.111	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.598:0.494,0.414,0.092	1|1:2:0,0,1	1|0:0.666:0.445,0.443,0.111	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.678:0.437,0.448,0.115	0|0:0.671:0.442,0.445,0.113	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.266:0.003,0.727,0.269	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.623:0.475,0.428,0.097	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.678:0.437,0.448,0.115	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.677:0.438,0.448,0.115	0|1:0.678:0.437,0.448,0.115	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.678:0.437,0.448,0.115	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.679:0.437,0.448,0.116	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.676:0.438,0.447,0.115	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.678:0.437,0.448,0.115	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.678:0.437,0.448,0.115	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19096319	SNP-3.19095078.	C	A	.	PASS	AR2=0.987;DR2=0.992;AF=0.427	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.604:0.044,0.307,0.648	1|1:1.407:0.089,0.416,0.495	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.402:0.09,0.418,0.492	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.983:0,0.017,0.983	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.539:0.054,0.354,0.592	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.85:0.011,0.128,0.861	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.627:0.044,0.286,0.671	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19097885	SNP-3.19096644.	A	G	.	PASS	AR2=0.912;DR2=0.932;AF=0.259	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.2:0.813,0.174,0.013	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.354:0.678,0.29,0.032	0|0:0.021:0.979,0.021,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.767:0.019,0.195,0.786	0|0:0.502:0.556,0.386,0.058	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.163:0.844,0.149,0.007	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.74:0.393,0.473,0.134	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.612:0.48,0.428,0.092	0|0:0.318:0.707,0.267,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.947,0.053,0	0|0:0.079:0.923,0.075,0.002	0|0:0:1,0,0	0|1:1.354:0.08,0.486,0.434	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.723:0.021,0.234,0.745	1|1:2:0,0,1	1|1:1.784:0.012,0.191,0.796	1|1:1.748:0.017,0.217,0.765	1|1:2:0,0,1	0|0:0.365:0.648,0.339,0.013	1|1:2:0,0,1	0|1:1.511:0.059,0.372,0.569	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.363:0.65,0.337,0.013	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.222:0.79,0.198,0.012	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.25:0.766,0.218,0.016	1|1:1.796:0.011,0.182,0.807	0|0:0.064:0.937,0.062,0.001	0|0:0.256:0.76,0.223,0.016	1|1:1.605:0.043,0.31,0.647	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.173:0.18,0.468,0.353	1|1:1.777:0.015,0.194,0.792	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.123:0.103,0.672,0.226	1|1:2:0,0,1	1|1:1.815:0.009,0.167,0.824	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.49:0.067,0.376,0.557	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.922,0.077,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.079:0.923,0.075,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.761:0.017,0.204,0.779	0|0:0.078:0.924,0.075,0.002	0|0:0:1,0,0	1|1:1.687:0.027,0.259,0.714	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.922,0.077,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.78:0.013,0.194,0.793	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.051,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.08:0.922,0.077,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.636:0.448,0.469,0.084	0|0:0:1,0,0	0|0:0.332:0.698,0.272,0.03	1|0:1.765:0.016,0.202,0.781	1|1:1.733:0.037,0.193,0.77	1|1:1.612:0.044,0.299,0.656	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.363:0.126,0.385,0.489	1|1:1.606:0.036,0.321,0.643	0|1:1.221:0.159,0.46,0.38	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.424:0.634,0.308,0.058	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.373:0.64,0.346,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.708:0.023,0.245,0.731	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.508:0.068,0.355,0.577
+3	19097980	SNP-3.19096739.	A	G	.	PASS	AR2=0.981;DR2=0.983;AF=0.518	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.974:0.001,0.024,0.975	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.161:0.846,0.148,0.007	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.15:0.179,0.493,0.328	1|1:1.968:0,0.032,0.968	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.939:0.001,0.058,0.94	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.104:0.899,0.098,0.003	1|1:2:0,0,1	1|1:1.918:0.001,0.079,0.92	1|1:2:0,0,1	1|1:1.839:0.01,0.14,0.85	1|1:2:0,0,1	0|0:0.118:0.886,0.11,0.004	1|1:1.895:0.004,0.098,0.899	1|1:2:0,0,1	0|0:0.13:0.874,0.121,0.005	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.92:0.002,0.077,0.922	1|1:2:0,0,1	1|1:1.784:0.006,0.204,0.79	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.932:0.107,0.853,0.039	1|1:2:0,0,1	1|1:1.904:0.003,0.091,0.906	0|1:0.989:0.225,0.562,0.214	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.116:0.888,0.109,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.121:0.883,0.114,0.003	0|0:0:1,0,0	1|0:1.048:0.221,0.51,0.269	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0.16:0.849,0.143,0.009	0|0:0.1:0.903,0.095,0.003	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.916:0.002,0.081,0.917	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.102:0.901,0.096,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.121:0.882,0.114,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.951:0.001,0.048,0.951	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.104:0.899,0.098,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.808:0.012,0.168,0.82	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.154:0.854,0.139,0.007	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.891:0.015,0.079,0.906	0|0:0.145:0.866,0.123,0.011	1|1:2:0,0,1
+3	19103719	SNP-3.19102478.	C	A	.	PASS	AR2=0.96;DR2=0.97;AF=0.327	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.119:0.885,0.111,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.901:0,0.098,0.901	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	1|1:1.619:0.029,0.323,0.648	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.166:0.841,0.152,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.173:0.836,0.155,0.009	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.199:0.812,0.177,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.964,0.036,0.001	1|0:0.198:0.813,0.176,0.011	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0.196:0.814,0.175,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.682:0.014,0.29,0.696	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.653:0.026,0.295,0.679	0|0:0:1,0,0	1|1:1.671:0.018,0.292,0.69	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.962:0,0.038,0.962	1|1:2:0,0,1	1|1:1.423:0.087,0.403,0.51	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.892:0.001,0.105,0.893	1|1:1.724:0.014,0.247,0.739	1|1:2:0,0,1	0|0:0.208:0.803,0.185,0.012	1|1:1.888:0.001,0.109,0.89	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.941:0.001,0.057,0.942	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.377:0.103,0.417,0.48	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.971:0.001,0.028,0.971	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.202:0.809,0.18,0.011	0|0:0.195:0.815,0.174,0.011	0|0:0.002:0.998,0.002,0	0|0:0.203:0.808,0.181,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.21:0.802,0.186,0.012	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.288:0.734,0.243,0.023	0|0:0:1,0,0	0|0:0.191:0.819,0.171,0.01	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.97:0,0.03,0.97	0|0:0.03:0.97,0.03,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.695:0.028,0.248,0.723	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.206:0.805,0.183,0.011	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.084:0.92,0.075,0.005	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.886:0.007,0.099,0.893	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.722:0.019,0.24,0.741	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.395:0.22,0.165,0.615	0|0:0:1,0,0
+3	19104084	SNP-3.19102843.	A	G	.	PASS	AR2=0.887;DR2=0.919;AF=0.343	GT:DS:GP	1|0:1.389:0.096,0.418,0.485	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.415:0.158,0.269,0.573	1|1:1.458:0.069,0.403,0.528	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.855:0.007,0.131,0.862	1|1:2:0,0,1	1|1:1.441:0.072,0.414,0.513	1|0:1.204:0.152,0.492,0.356	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.132:0.208,0.453,0.339	1|1:1.699:0.005,0.292,0.704	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.551:0.053,0.343,0.604	1|1:2:0,0,1	1|1:1.714:0.032,0.222,0.746	0|0:0:1,0,0	1|0:1.306:0.032,0.629,0.338	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.575:0.042,0.341,0.617	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.419:0.086,0.41,0.504	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.345:0.115,0.426,0.46	1|1:1.507:0.061,0.371,0.568	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.497:0.065,0.372,0.562	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.123:0.2,0.476,0.323	0|0:0:1,0,0	1|1:1.48:0.069,0.382,0.549	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.544:0.054,0.349,0.597	0|1:1.3:0.133,0.435,0.433	1|0:1.483:0.068,0.381,0.551	1|1:2:0,0,1	0|1:1.35:0.103,0.445,0.453	0|0:0:1,0,0	0|0:0.588:0.502,0.408,0.09	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.405:0.082,0.431,0.487	0|1:0.698:0.383,0.536,0.081	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:1.549:0.054,0.344,0.602	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.374:0.099,0.427,0.474	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	0|0:0.56:0.578,0.284,0.138	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.213:0.803,0.18,0.016	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.857:0.005,0.133,0.862	1|1:2:0,0,1	1|1:1.862:0.006,0.125,0.869	0|0:0.562:0.521,0.396,0.083	0|0:0.138:0.869,0.125,0.007	0|0:0:1,0,0	0|0:0.157:0.852,0.139,0.009	1|1:1.512:0.062,0.365,0.573	0|0:0:1,0,0	1|0:1.434:0.067,0.432,0.501	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.807:0.019,0.154,0.827	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.477:0.069,0.386,0.545	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.707:0.028,0.236,0.736	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.908:0.003,0.087,0.91	1|0:1.422:0.082,0.414,0.504	1|1:1.89:0.003,0.103,0.893	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.597:0.046,0.312,0.643	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.23:0.196,0.377,0.427	1|1:1.884:0.005,0.106,0.889	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.057:0.283,0.377,0.34	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.128:0.88,0.111,0.008	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.53:0.059,0.351,0.589	0|0:0:1,0,0	1|1:1.43:0.082,0.406,0.512	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.905:0.003,0.089,0.908	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.505:0.064,0.367,0.569
+3	19104548	SNP-3.19103307.	C	A	.	PASS	AR2=0.963;DR2=0.971;AF=0.379	GT:DS:GP	0|0:0.011:0.989,0.011,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.2:0.814,0.173,0.013	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.096:0.908,0.089,0.003	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.119:0.886,0.11,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.125:0.88,0.115,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.284:0.736,0.243,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.075:0.926,0.072,0.002	0|0:0.031:0.97,0.028,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.339:0.69,0.281,0.029	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.957,0.043,0	0|0:0.007:0.993,0.007,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.965,0.034,0	0|0:0:1,0,0	0|0:0.033:0.967,0.032,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.312:0.712,0.263,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.313:0.712,0.263,0.025	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.137:0.864,0.135,0.001	0|0:0.174:0.828,0.171,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.323:0.702,0.272,0.025	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.128:0.872,0.127,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.313:0.712,0.263,0.025	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.311:0.714,0.262,0.025	0|0:0.313:0.712,0.263,0.025	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.308:0.716,0.26,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.313:0.712,0.263,0.025	0|0:0.313:0.712,0.263,0.025	0|0:0.045:0.956,0.044,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0.062:0.94,0.058,0.002	0|0:0.013:0.987,0.013,0	0|0:0.313:0.712,0.263,0.025	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.936,0.063,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.314:0.711,0.264,0.025	0|0:0.312:0.713,0.262,0.025	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.307:0.717,0.259,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.026:0.975,0.025,0.001	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.312:0.712,0.263,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.303:0.72,0.256,0.023	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.32:0.706,0.268,0.026	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.615:0.135,0.114,0.75	0|0:0:1,0,0
+3	19105632	SNP-3.19104391.	C	A	.	PASS	AR2=0.99;DR2=0.991;AF=0.336	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.758:0.01,0.221,0.768	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.852:0.006,0.136,0.858	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.958:0.001,0.04,0.959	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.964:0,0.035,0.964	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.961:0.001,0.037,0.962	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.967:0.001,0.032,0.967	0|0:0:1,0,0	1|1:1.911:0.002,0.085,0.913	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.942:0.001,0.056,0.943	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.85:0.006,0.139,0.855	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.974:0,0.026,0.974	1|1:2:0,0,1	1|1:1.952:0.001,0.047,0.952	1|1:2:0,0,1	1|1:1.931:0.002,0.064,0.933	1|1:1.863:0.006,0.124,0.87	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.965:0,0.035,0.965	1|1:1.977:0,0.022,0.977	1|1:1.944:0,0.056,0.944	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.912:0.001,0.086,0.913	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.872:0.003,0.122,0.875	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.909:0.002,0.087,0.911	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.879:0.005,0.111,0.884	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.796:0.011,0.181,0.808	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.881:0.004,0.111,0.885	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.93:0.002,0.067,0.931	0|0:0:1,0,0
+3	19107776	SNP-3.19106535.	A	G	.	PASS	AR2=0.996;DR2=0.998;AF=0.285	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.917:0.002,0.078,0.919	1|1:1.933:0.001,0.065,0.934	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.018,0.981	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.535:0.01,0.446,0.545	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.972:0,0.028,0.972	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	19107792	SNP-3.19106551.	C	A	.	PASS	AR2=0.98;DR2=0.98;AF=0.418	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.963,0.037,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.152:0.181,0.486,0.333	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.827:0.373,0.428,0.199	0|1:1.128:0.191,0.49,0.319	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.132:0.189,0.49,0.321	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:1.996:0,0.004,0.996	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.139:0.187,0.488,0.326	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.134:0.188,0.489,0.323	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.14:0.186,0.488,0.326	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:1.143:0.185,0.487,0.328	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	1|0:1.143:0.185,0.487,0.328	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19110031	SNP-3.19108790.	A	G	.	PASS	AR2=0.954;DR2=0.964;AF=0.474	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.977:0,0.023,0.977	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.788:0.014,0.184,0.802	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.746:0.017,0.22,0.763	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.784:0.013,0.19,0.797	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.557:0.5,0.442,0.057	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.676:0.032,0.26,0.708	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.344:0.681,0.293,0.026	1|1:2:0,0,1	1|1:1.773:0.013,0.201,0.786	1|0:1.093:0.205,0.497,0.298	1|0:1.722:0.02,0.237,0.742	1|1:2:0,0,1	1|1:1.75:0.016,0.218,0.766	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.745:0.016,0.222,0.762	1|1:2:0,0,1	1|1:1.749:0.016,0.219,0.765	0|0:0.405:0.628,0.339,0.033	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.772:0.013,0.202,0.785	0|0:0:1,0,0	0|0:0.317:0.711,0.262,0.028	1|1:1.771:0.011,0.206,0.782	1|1:2:0,0,1	0|0:0.357:0.677,0.289,0.034	1|1:2:0,0,1	1|1:1.737:0.018,0.228,0.755	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.648:0.026,0.301,0.673	1|1:2:0,0,1	1|1:1.706:0.032,0.23,0.738	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.791:0.012,0.185,0.803	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.542:0.535,0.389,0.077	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.852:0.004,0.139,0.857	1|1:2:0,0,1	1|1:1.664:0.032,0.272,0.696	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.778:0.014,0.195,0.792	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.921:0.002,0.076,0.922	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.988:0,0.011,0.988	0|0:0:1,0,0	1|1:1.786:0.011,0.191,0.797	1|1:1.862:0.01,0.119,0.872	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.946:0.002,0.051,0.947	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.784:0.013,0.191,0.797	1|1:2:0,0,1	1|1:1.758:0.015,0.212,0.773	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.767:0.014,0.206,0.781	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.982:0,0.017,0.982	0|0:0.038:0.964,0.034,0.002	1|1:1.976:0,0.023,0.976	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.317:0.711,0.262,0.028	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.726:0.02,0.234,0.746	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.767:0.01,0.214,0.777	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.779:0.015,0.191,0.794	1|1:1.953:0.001,0.044,0.954	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.278:0.74,0.242,0.018	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19111719	SNP-3.19110478.	C	A	.	PASS	AR2=0.976;DR2=0.986;AF=0.384	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0.567:0.514,0.404,0.082	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.581:0.503,0.413,0.084	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.568:0.514,0.404,0.082	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.568:0.514,0.404,0.082	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:0.673:0.44,0.447,0.113	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.568:0.514,0.404,0.082	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.568:0.514,0.404,0.082	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.464:0.597,0.343,0.061	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19112213	SNP-3.19110972.	A	G	.	PASS	AR2=0.857;DR2=0.889;AF=0.278	GT:DS:GP	0|0:0.253:0.772,0.203,0.025	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:1.029:0.243,0.485,0.272	0|0:0.052:0.95,0.048,0.002	0|0:0:1,0,0	0|1:0.957:0.271,0.501,0.228	0|1:1.198:0.175,0.452,0.373	1|1:2:0,0,1	1|1:1.267:0.126,0.481,0.393	0|0:0:1,0,0	0|0:0.751:0.397,0.455,0.148	1|1:1.547:0.053,0.347,0.6	0|0:0:1,0,0	1|0:0.715:0.417,0.452,0.131	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.922:0.179,0.719,0.102	1|1:2:0,0,1	1|0:0.728:0.416,0.439,0.145	0|0:0:1,0,0	0|0:0.098:0.904,0.093,0.002	0|0:0.22:0.784,0.212,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.897:0.001,0.102,0.898	1|1:2:0,0,1	0|0:0.44:0.616,0.328,0.056	1|1:1.501:0.066,0.367,0.567	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.163:0.182,0.473,0.345	1|1:0.888:0.315,0.482,0.203	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.956:0.26,0.524,0.216	1|1:2:0,0,1	1|1:1.454:0.087,0.372,0.541	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.085:0.916,0.083,0.001	0|0:0:1,0,0	0|0:0.512:0.508,0.472,0.02	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.104:0.214,0.467,0.318	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.271:0.735,0.259,0.006	0|0:0.431:0.641,0.287,0.072	0|0:0.274:0.745,0.237,0.019	0|0:0.236:0.79,0.184,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.147:0.185,0.483,0.332	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.106:0.898,0.099,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.148:0.856,0.14,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.314:0.717,0.251,0.031	0|0:0.067:0.935,0.064,0.001	0|0:0:1,0,0	0|0:0.202:0.806,0.186,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.242:0.762,0.234,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.185:0.834,0.147,0.019	0|0:0:1,0,0	0|1:1.363:0.129,0.378,0.492	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.744:0.422,0.413,0.166	0|0:0.258:0.763,0.216,0.021	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.974:0.225,0.576,0.199	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.443:0.074,0.41,0.517	0|0:0:1,0,0	1|0:1.476:0.073,0.378,0.549	1|1:2:0,0,1	0|0:0.122:0.883,0.113,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.937:0.263,0.536,0.201	0|0:0:1,0,0	1|1:1.585:0.052,0.312,0.637	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.569:0.081,0.268,0.651	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.013:0.987,0.013,0	1|1:1.722:0.037,0.203,0.759	1|1:1.182:0.181,0.456,0.363	0|0:0:1,0,0	0|1:0.892:0.313,0.481,0.205	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.319:0.113,0.456,0.431	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.343:0.099,0.459,0.442	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.472:0.073,0.382,0.545	0|0:0:1,0,0	1|1:1.344:0.118,0.419,0.463	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.606:0.498,0.398,0.104	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.291:0.142,0.425,0.433	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.149:0.187,0.478,0.336	1|1:2:0,0,1	0|0:0.04:0.962,0.036,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.02:0.01,0.96,0.03	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	0|0:0.539:0.552,0.356,0.092	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.357:0.673,0.296,0.03	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.843:0.338,0.482,0.181	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19113142	SNP-3.19111901.	C	A	.	PASS	AR2=0.986;DR2=0.987;AF=0.411	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.21:0.145,0.501,0.355	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.986:0.255,0.504,0.241	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.99:0.255,0.5,0.245	0|1:0.967:0.267,0.498,0.234	0|0:0:1,0,0	0|1:0.965:0.268,0.498,0.233	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.967:0.267,0.498,0.234	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19113904	SNP-3.19112663.	C	A	.	PASS	AR2=0.981;DR2=0.986;AF=0.406	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.033:0.249,0.468,0.283	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.534:0.087,0.292,0.621	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.711:0.292,0.706,0.002	0|0:0.34:0.661,0.338,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.604:0.015,0.365,0.619	1|1:1.853:0.01,0.127,0.863	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.945:0,0.054,0.946	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.77:0.266,0.699,0.036	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.209:0.06,0.672,0.268	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.65:0.507,0.336,0.157	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.234:0.787,0.192,0.021	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.861:0.008,0.123,0.869	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19114865	SNP-3.19113624.	C	A	.	PASS	AR2=0.886;DR2=0.91;AF=0.351	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.94:0.001,0.057,0.942	0|0:0.382:0.642,0.335,0.023	0|0:0:1,0,0	0|0:0.667:0.428,0.477,0.095	1|1:1.905:0.001,0.094,0.906	1|1:2:0,0,1	1|1:1.778:0.019,0.184,0.797	0|0:0.782:0.435,0.349,0.217	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.803:0.347,0.504,0.15	1|1:1.869:0.008,0.116,0.876	0|1:0.667:0.455,0.423,0.122	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.609:0.481,0.428,0.091	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.133:0.192,0.483,0.325	0|0:0:1,0,0	0|0:0.588:0.504,0.405,0.091	0|1:1.092:0.208,0.492,0.3	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.092:0.214,0.48,0.306	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.174:0.087,0.652,0.261	1|1:2:0,0,1	1|0:1.068:0.228,0.475,0.297	1|0:1.433:0.1,0.366,0.534	0|0:0.198:0.812,0.178,0.01	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:1.948:0.001,0.05,0.949	1|1:2:0,0,1	0|0:0.234:0.799,0.169,0.032	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	1|0:0.87:0.256,0.617,0.127	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.91:0,0.09,0.91	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.613:0.479,0.428,0.093	0|0:0:1,0,0	0|1:1.401:0.082,0.435,0.483	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.027,0.972	0|0:0:1,0,0	1|1:1.72:0.008,0.264,0.728	0|0:0:1,0,0	1|1:1.746:0.018,0.219,0.763	0|0:0.194:0.816,0.174,0.01	0|0:0.158:0.851,0.14,0.009	0|0:0:1,0,0	1|1:1.897:0.004,0.095,0.901	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.889:0.294,0.524,0.182	1|1:1.764:0.006,0.223,0.77	0|0:0:1,0,0	1|1:1.954:0.001,0.044,0.955	1|1:2:0,0,1	1|1:1.945:0.001,0.053,0.946	0|0:0.709:0.447,0.397,0.156	1|1:2:0,0,1	1|1:1.599:0.063,0.276,0.661	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.805:0.004,0.186,0.809	1|1:1.986:0,0.014,0.986	1|1:1.945:0.001,0.054,0.946	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.698:0.02,0.262,0.718	0|0:0:1,0,0	1|0:1.061:0.221,0.497,0.282	0|0:0.441:0.576,0.408,0.017	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.063:0.939,0.06,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.942:0.001,0.056,0.943	1|0:0.998:0.25,0.501,0.248	1|1:2:0,0,1	1|0:1.071:0.217,0.495,0.288	0|1:1.062:0.221,0.497,0.282	1|1:1.714:0.042,0.202,0.756	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.845:0.339,0.478,0.184	0|0:0.313:0.714,0.259,0.027	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.883:0.004,0.108,0.887	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.263:0.072,0.594,0.334	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.724:0.36,0.555,0.085	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.179:0.846,0.129,0.025	1|1:2:0,0,1	0|1:1.067:0.218,0.497,0.285	0|0:0.839:0.351,0.459,0.19	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.86:0.336,0.467,0.197	0|1:1.078:0.213,0.497,0.291	1|1:1.219:0.175,0.431,0.394	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.004:0.246,0.503,0.25	0|1:0.716:0.437,0.411,0.153	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.891:0.001,0.107,0.892	0|0:0:1,0,0
+3	19116045	SNP-3.19114804.	C	A	.	PASS	AR2=0.997;DR2=0.997;AF=0.363	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:1.956:0.002,0.041,0.958	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.072:0.929,0.069,0.001	0|0:0.069:0.932,0.066,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0.087:0.915,0.083,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0.036:0.965,0.035,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.978:0.001,0.02,0.979	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.048:0.952,0.047,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.972:0.001,0.027,0.972	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.015:0.985,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.094:0.908,0.089,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19119983	SNP-3.19118742.	A	G	.	PASS	AR2=0.917;DR2=0.936;AF=0.271	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.183:0.193,0.431,0.376	0|0:0:1,0,0	1|1:1.904:0.003,0.09,0.907	1|0:0.959:0.261,0.519,0.22	1|1:1.606:0.052,0.29,0.658	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.047:0.14,0.674,0.186	0|0:0:1,0,0	0|1:1.049:0.18,0.591,0.229	0|1:1.377:0.099,0.425,0.476	0|0:0:1,0,0	1|1:1.861:0.008,0.124,0.869	0|0:0.025:0.976,0.024,0	0|0:0:1,0,0	1|1:1.654:0.037,0.272,0.691	1|1:1.935:0,0.064,0.936	1|0:1.136:0.144,0.576,0.28	1|1:1.724:0.018,0.241,0.742	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.928:0.001,0.069,0.93	1|1:1.572:0.046,0.336,0.618	1|1:1.384:0.029,0.558,0.413	1|1:1.377:0.099,0.426,0.475	1|1:2:0,0,1	1|1:1.906:0.004,0.087,0.909	1|1:2:0,0,1	1|1:1.853:0.015,0.116,0.868	1|0:0.742:0.402,0.454,0.144	0|1:1.143:0.126,0.605,0.269	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.059:0.942,0.057,0.001	1|1:2:0,0,1	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.114:0.887,0.112,0.001	0|0:0.475:0.538,0.45,0.013	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.067:0.204,0.524,0.272	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.243:0.777,0.203,0.02	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.51:0.526,0.438,0.036	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.028:0.243,0.487,0.271	1|1:1.309:0.13,0.43,0.44	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.226:0.778,0.218,0.004	0|0:0.047:0.953,0.047,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.182:0.821,0.177,0.002	0|0:0.478:0.539,0.444,0.017	0|0:0.481:0.577,0.365,0.058	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.98:0,0.019,0.98	1|1:1.729:0.021,0.229,0.75	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.016:0.984,0.016,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.855:0.331,0.483,0.186	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.331:0.043,0.583,0.374	0|1:1.328:0.112,0.447,0.441	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.383:0.038,0.541,0.421	1|1:2:0,0,1	0|1:1.273:0.087,0.554,0.36	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.901:0.003,0.093,0.904	1|1:2:0,0,1	1|1:1.941:0.002,0.056,0.943	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.058:0.943,0.056,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.784:0.012,0.192,0.796	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	19120835	SNP-3.19119594.	C	A	.	PASS	AR2=0.965;DR2=0.976;AF=0.307	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.79:0.012,0.186,0.802	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.827:0.011,0.152,0.838	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.017:0.984,0.016,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.948,0.052,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1.153:0.174,0.498,0.328	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.928:0.001,0.071,0.928	0|0:0.031:0.969,0.031,0	0|0:0:1,0,0	1|1:1.354:0.093,0.46,0.447	1|0:1:0,1,0	0|1:1.401:0.095,0.409,0.496	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.523:0.545,0.388,0.067	1|0:0.681:0.443,0.433,0.124	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.499:0.043,0.415,0.542	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.693:0.047,0.213,0.74	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.851:0.007,0.134,0.858	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.812:0.016,0.156,0.828	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.105:0.898,0.099,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.876:0.013,0.097,0.889	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.878:0.006,0.109,0.885	1|1:1.961:0.001,0.037,0.962	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.274:0.164,0.397,0.439	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	19120968	SNP-3.19119727.	A	G	.	PASS	AR2=0.917;DR2=0.936;AF=0.526	GT:DS:GP	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.373:0.11,0.408,0.482	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:0.941:0.203,0.653,0.144	1|1:1.304:0.126,0.444,0.43	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.493:0.065,0.377,0.558	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.726:0.018,0.238,0.744	1|0:0.972:0.219,0.591,0.191	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.503:0.064,0.369,0.567	1|0:1:0,1,0	1|1:1.297:0.128,0.447,0.425	1|1:2:0,0,1	1|1:1.893:0.004,0.099,0.897	1|1:2:0,0,1	1|1:1.824:0.019,0.139,0.842	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.974:0.001,0.025,0.974	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.966:0,0.033,0.967	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.891:0.003,0.104,0.893	1|1:2:0,0,1	1|0:1:0,1,0	1|0:0.722:0.338,0.601,0.06	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.997:0.233,0.536,0.23	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.985:0,0.014,0.986	0|0:0:1,0,0	1|1:1.242:0.148,0.462,0.39	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.101:0.216,0.468,0.317	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.616:0.042,0.301,0.657	1|1:1.725:0.019,0.237,0.744	1|1:1.441:0.06,0.44,0.501	1|0:1.327:0.13,0.414,0.457	1|1:1.55:0.063,0.324,0.613	1|1:1.31:0.111,0.469,0.421	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.033:0.221,0.526,0.253	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.952,0.047,0.001	0|0:0:1,0,0	1|1:1.914:0.003,0.08,0.917	0|0:0:1,0,0	0|1:1.135:0.216,0.434,0.35	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.476:0.074,0.376,0.55	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	1|1:1.904:0.003,0.09,0.907	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.548:0.525,0.402,0.073	1|1:1.899:0.005,0.091,0.904	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.543:0.054,0.35,0.596	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.614:0.063,0.259,0.677	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.73:0.02,0.23,0.75	0|1:1:0,1,0	1|1:1.294:0.121,0.463,0.416	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.977:0.001,0.022,0.978	0|0:0:1,0,0	1|1:1.983:0,0.017,0.983	1|1:1.272:0.193,0.342,0.465	1|1:1.915:0.003,0.079,0.918	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.829:0.008,0.154,0.838	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.879:0.005,0.111,0.884	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.598:0.042,0.318,0.64	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.73:0.019,0.232,0.749	0|1:1.277:0.13,0.462,0.408	1|1:2:0,0,1	1|1:1.975:0,0.025,0.975	1|1:1.978:0.001,0.02,0.979	1|1:1.912:0.003,0.083,0.915	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.933:0.001,0.064,0.935	1|1:1.904:0.003,0.089,0.907	1|0:1.304:0.13,0.436,0.434	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:1.921:0.002,0.075,0.923	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.681:0.028,0.262,0.71	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.859:0.004,0.134,0.862	0|0:0:1,0,0	1|1:2:0,0,1
+3	19123027	SNP-3.19121786.	A	G	.	PASS	AR2=0.876;DR2=0.91;AF=0.246	GT:DS:GP	0|0:0.176:0.83,0.164,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.364:0.66,0.315,0.024	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.719:0.393,0.494,0.113	0|0:0:1,0,0	1|1:1.6:0.074,0.251,0.675	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.346:0.683,0.289,0.028	0|0:0:1,0,0	1|0:1.022:0.245,0.488,0.267	0|0:0:1,0,0	0|0:0.615:0.482,0.42,0.097	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.691:0.426,0.457,0.117	0|0:0.602:0.558,0.281,0.161	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.805:0.197,0.8,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.998:0.252,0.498,0.25	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.897:0.253,0.598,0.149	0|0:0:1,0,0	0|0:0.234:0.781,0.204,0.015	0|0:0:1,0,0	0|0:0.487:0.58,0.354,0.067	1|1:1.784:0.017,0.182,0.801	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.956:0.288,0.468,0.244	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.315:0.161,0.363,0.476	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.748:0.033,0.187,0.781	1|0:0.882:0.313,0.492,0.195	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.351:0.135,0.379,0.486	1|0:0.821:0.315,0.549,0.136	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.125:0.875,0.125,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.026,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.492:0.062,0.385,0.553	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.223:0.785,0.208,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.612:0.037,0.313,0.65	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.526:0.544,0.386,0.07	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.207:0.804,0.184,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.181:0.831,0.157,0.012	0|0:0.542:0.535,0.387,0.078	1|0:0.599:0.474,0.453,0.073	0|0:0.648:0.459,0.433,0.107	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.831:0.33,0.509,0.161	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.743:0.359,0.538,0.102	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.629:0.454,0.462,0.083	1|0:0.477:0.58,0.363,0.057	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.215:0.798,0.19,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.428:0.075,0.422,0.503	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.09:0.913,0.085,0.003	0|0:0.531:0.54,0.389,0.071	0|0:0.586:0.505,0.404,0.091	1|1:1.59:0.035,0.339,0.626	0|0:0.126:0.879,0.116,0.005	1|0:0.936:0.074,0.916,0.01	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.252:0.776,0.195,0.028	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.447:0.091,0.37,0.538	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.97,0.029,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.734:0.024,0.219,0.758	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	19123074	SNP-3.19121833.	A	G	.	PASS	AR2=0.983;DR2=0.985;AF=0.348	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.068:0.933,0.066,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.029:0.971,0.029,0	0|0:0.204:0.809,0.179,0.012	0|0:0.18:0.834,0.151,0.014	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.936,0.063,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.054:0.947,0.053,0.001	0|0:0.047:0.953,0.047,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.943,0.056,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.42:0.586,0.407,0.007	0|1:1:0,1,0	0|0:0.328:0.679,0.315,0.006	0|0:0.186:0.823,0.167,0.009	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0.024:0.976,0.024,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.76:0.365,0.509,0.126	1|1:2:0,0,1	0|0:0.325:0.696,0.283,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.921:0.008,0.063,0.929	0|0:0:1,0,0	0|0:0.042:0.959,0.041,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.136:0.865,0.134,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.92:0.092,0.897,0.011	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.023:0.978,0.022,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0	0|0:0:1,0,0	0|0:0.037:0.963,0.036,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.97,0.029,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.939,0.059,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.085:0.239,0.437,0.324	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.015:0.985,0.015,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	19124647	SNP-3.19123406.	A	G	.	PASS	AR2=0.95;DR2=0.962;AF=0.399	GT:DS:GP	1|1:1.362:0.091,0.457,0.452	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.856:0.01,0.125,0.866	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.349:0.677,0.297,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.958:0.063,0.917,0.02	0|0:0.234:0.782,0.201,0.017	0|0:0.14:0.865,0.13,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.318:0.705,0.273,0.023	0|0:0:1,0,0	0|0:0.059:0.943,0.055,0.002	0|0:0.109:0.894,0.102,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.623:0.391,0.596,0.014	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.951,0.048,0.001	0|0:0:1,0,0	0|0:0.29:0.731,0.248,0.021	1|1:1.612:0,0.388,0.612	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.377:0.663,0.298,0.039	1|1:1.179:0.18,0.461,0.359	1|1:1.199:0.175,0.451,0.374	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.127:0.888,0.096,0.016	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.64:0.041,0.278,0.681	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.835:0.005,0.156,0.84	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.761:0.021,0.196,0.782	1|1:2:0,0,1	1|1:1.55:0.053,0.343,0.603	1|1:2:0,0,1	1|1:1.664:0.031,0.274,0.695	0|0:0.667:0.479,0.376,0.146	0|0:0:1,0,0	1|1:1.636:0.036,0.292,0.672	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.965:0.001,0.033,0.966	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.678:0.034,0.254,0.712	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.578:0.005,0.411,0.583	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.075:0.927,0.071,0.002	0|0:0.111:0.893,0.103,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.346:0.686,0.282,0.032	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.95,0.046,0.003	0|0:0.274:0.743,0.24,0.017	0|0:0:1,0,0	0|0:0.159:0.846,0.148,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.926,0.071,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.028:0.973,0.027,0	0|0:0:1,0,0	0|0:0.088:0.915,0.082,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.092:0.91,0.087,0.002	1|1:1.539:0.064,0.334,0.603	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.244:0.777,0.202,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.497:0.049,0.404,0.547	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.88:0.007,0.106,0.887	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19125149	SNP-3.19123908.	C	A	.	PASS	AR2=1;DR2=1;AF=0.352	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19127054	SNP-3.19125813.	A	G	.	PASS	AR2=0.857;DR2=0.897;AF=0.349	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.08:0.922,0.075,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.361:0.106,0.427,0.467	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.396:0,0.604,0.396	0|1:1:0,1,0	1|1:1.314:0.118,0.451,0.431	1|1:1.369:0.101,0.429,0.47	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.444:0.082,0.392,0.526	0|1:1.295:0.126,0.453,0.421	1|1:2:0,0,1	1|1:1.36:0.106,0.427,0.466	1|1:2:0,0,1	1|1:1.445:0.086,0.383,0.531	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.361:0.106,0.427,0.467	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.827:0.01,0.154,0.836	0|0:1.268:0.14,0.453,0.407	1|1:2:0,0,1	1|0:1.174:0.155,0.517,0.328	0|1:1.09:0.211,0.488,0.301	1|1:2:0,0,1	1|1:1.614:0.04,0.306,0.654	0|1:0.933:0.28,0.507,0.213	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.582:0.052,0.315,0.633	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.024:0.223,0.53,0.247	1|1:1.473:0.076,0.376,0.548	0|0:0:1,0,0	0|0:0.761:0.43,0.38,0.191	1|1:2:0,0,1	1|0:0.65:0.43,0.49,0.08	0|0:0:1,0,0	1|0:1.29:0.14,0.43,0.43	1|0:1.22:0.153,0.474,0.373	0|0:0.196:0.81,0.183,0.007	0|0:0.307:0.7,0.294,0.006	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.103:0.897,0.103,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.903:0.002,0.094,0.904	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.667:0.52,0.293,0.187	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.101:0.227,0.444,0.329	1|1:1.724:0.022,0.232,0.746	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.197:0.15,0.504,0.347	1|1:2:0,0,1	1|1:1.361:0.106,0.427,0.467	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|1:0.974:0.275,0.476,0.249	0|0:0:1,0,0	0|1:1.114:0.193,0.5,0.307	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.442:0.083,0.392,0.525	0|0:0:1,0,0	1|1:1.448:0.081,0.39,0.529	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.421:0.091,0.396,0.513	1|1:1.338:0.114,0.434,0.452	1|1:1.279:0.124,0.474,0.403	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.224:0.143,0.491,0.367	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.338:0.089,0.485,0.426	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.304:0.118,0.461,0.422	1|1:2:0,0,1	0|1:1.361:0.106,0.427,0.467	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.773:0.012,0.202,0.786	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.797:0.011,0.182,0.808	0|0:0.451:0.612,0.325,0.063	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.441:0.082,0.395,0.523	0|0:0:1,0,0	1|0:1.4:0.097,0.406,0.497	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.947:0.318,0.417,0.265	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.479:0.075,0.371,0.554	1|0:1.335:0.113,0.438,0.448	1|0:1.261:0.144,0.451,0.405	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.956:0,0.044,0.956	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.599:0.498,0.404,0.097	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:1.925:0.002,0.071,0.927	0|0:0:1,0,0	1|1:1.961:0.001,0.038,0.962
+3	19127791	SNP-3.19126550.	A	G	.	PASS	AR2=0.97;DR2=0.983;AF=0.232	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.895:0.004,0.097,0.899	0|1:1.356:0.104,0.435,0.46	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1.476:0.076,0.372,0.552	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.358:0.104,0.434,0.462	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.382:0.095,0.427,0.477	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.358:0.104,0.433,0.463	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.428:0.077,0.418,0.505	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.968:0.001,0.031,0.969	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	19127952	SNP-3.19126711.	A	G	.	PASS	AR2=0.995;DR2=0.996;AF=0.208	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.385:0.629,0.358,0.014	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.303:0.713,0.271,0.016	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.964:0.001,0.035,0.964	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19128108	SNP-3.19126867.	C	A	.	PASS	AR2=0.988;DR2=0.99;AF=0.425	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|0:1:0,1,0	0|0:0.183:0.825,0.168,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.145:0.861,0.134,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0.201:0.81,0.18,0.01	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.107:0.895,0.104,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.114:0.889,0.107,0.003	0|0:0.341:0.688,0.283,0.029	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:1.493:0.094,0.32,0.586	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.075:0.927,0.071,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.095:0.907,0.091,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.158:0.849,0.144,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.131:0.874,0.12,0.005	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.144:0.862,0.133,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.09:0.913,0.085,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.14:0.865,0.13,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19128197	SNP-3.19126956.	C	A	.	PASS	AR2=0.96;DR2=0.971;AF=0.304	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.948,0.051,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.084:0.918,0.08,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.747:0.254,0.745,0.001	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.973:0.001,0.025,0.974	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.272:0.142,0.444,0.414	1|1:2:0,0,1	0|0:0.126:0.89,0.095,0.016	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.361:0.093,0.453,0.454	0|0:0:1,0,0	1|0:0.723:0.281,0.716,0.003	1|1:2:0,0,1	1|1:1.946:0.001,0.052,0.947	1|1:1.916:0.002,0.079,0.918	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.42:0.031,0.518,0.451	1|1:2:0,0,1	0|1:1.181:0.116,0.586,0.297	1|1:2:0,0,1	1|1:1.827:0.011,0.15,0.839	1|0:0.763:0.237,0.763,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.443:0.056,0.444,0.499	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.72:0.442,0.396,0.162	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.812:0.008,0.173,0.819	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.088:0.216,0.481,0.304	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.358:0.644,0.354,0.002	0|0:0:1,0,0	1|1:1.697:0.025,0.254,0.722	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.871:0.157,0.815,0.028	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.881:0.005,0.11,0.885	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.775:0.041,0.143,0.816	0|1:1.376:0.13,0.363,0.507	1|1:2:0,0,1	1|1:1.928:0.002,0.068,0.93	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.01:0.99,0.01,0
+3	19128237	SNP-3.19126996.	C	A	.	PASS	AR2=0.948;DR2=0.962;AF=0.415	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.733:0.297,0.673,0.03	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.943,0.056,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.163:0.844,0.149,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.533:0.581,0.305,0.114	0|0:0.418:0.615,0.351,0.033	0|0:0.032:0.969,0.029,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.136:0.868,0.128,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.124:0.882,0.112,0.006	0|0:0.422:0.611,0.356,0.033	0|0:0.042:0.958,0.041,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.15:0.857,0.137,0.007	0|0:0:1,0,0	0|0:0.099:0.902,0.096,0.002	0|1:1:0,1,0	0|0:0.431:0.632,0.305,0.063	0|0:0.085:0.918,0.08,0.003	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.04:0.961,0.039,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.889:0.004,0.104,0.892	0|0:0:1,0,0	1|0:1.064:0.037,0.862,0.101	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.823:0.01,0.156,0.833	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.901:0.345,0.41,0.246	1|1:2:0,0,1	1|1:1.98:0,0.019,0.981	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.906,0.092,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.137:0.87,0.123,0.007	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.279:0.743,0.235,0.022	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.194:0.813,0.181,0.006	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.157:0.847,0.148,0.004	0|0:0.031:0.97,0.029,0.001	0|0:0:1,0,0	1|0:0.999:0.01,0.981,0.009	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.104:0.898,0.099,0.003	0|0:0:1,0,0	0|0:0.034:0.966,0.033,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.067:0.934,0.065,0.001	0|0:0.096:0.908,0.088,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.015:0.986,0.014,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0.105:0.898,0.099,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.959,0.04,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.1:0.902,0.095,0.003	0|0:0:1,0,0	0|0:0.369:0.677,0.276,0.046	0|1:0.524:0.545,0.386,0.069	0|0:0.521:0.547,0.385,0.068	0|0:0.521:0.547,0.384,0.068	0|0:0.021:0.979,0.02,0	0|1:0.521:0.547,0.384,0.068	0|0:0.176:0.826,0.172,0.002	0|0:0.525:0.544,0.387,0.069	0|0:0:1,0,0	0|0:0.521:0.547,0.385,0.068	0|0:0:1,0,0	0|0:0.033:0.968,0.031,0.001	0|0:0:1,0,0	0|1:0.521:0.547,0.385,0.068	0|0:0:1,0,0	0|0:0.518:0.549,0.383,0.068	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.105:0.898,0.099,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0
+3	19128315	SNP-3.19127074.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.201	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.522:0.067,0.344,0.589	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19129577	SNP-3.19128336.	C	A	.	PASS	AR2=0.963;DR2=0.97;AF=0.416	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.82:0.339,0.502,0.159	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.506:0.597,0.299,0.103	0|1:0.72:0.352,0.576,0.072	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.758:0.042,0.159,0.8	0|0:0.091:0.912,0.086,0.002	0|0:0.062:0.939,0.059,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.083:0.919,0.079,0.002	0|0:0.072:0.93,0.069,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.055:0.945,0.054,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.754:0.39,0.467,0.143	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.843:0.339,0.478,0.183	0|1:0.78:0.375,0.47,0.155	0|0:0.087:0.915,0.083,0.002	0|0:0:1,0,0	0|0:0.753:0.394,0.459,0.147	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.124:0.879,0.118,0.003	0|0:0:1,0,0	0|0:0.12:0.885,0.111,0.004	0|0:0.118:0.887,0.108,0.005	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.347:0.72,0.213,0.067	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.6:0,0.4,0.6	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.051:0.95,0.05,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.033:0.967,0.032,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.067:0.933,0.067,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.115:0.888,0.109,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.11:0.895,0.099,0.005	1|1:2:0,0,1	0|0:0.095:0.908,0.089,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.672:0.438,0.451,0.11	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.961,0.039,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.979:0.253,0.514,0.233	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.074:0.929,0.069,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.033,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.248:0.172,0.409,0.42	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.396:0.675,0.254,0.071	1|1:2:0,0,1	0|0:0:1,0,0
+3	19129604	SNP-3.19128363.	C	A	.	PASS	AR2=0.984;DR2=0.989;AF=0.494	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:0.767:0.373,0.488,0.139	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1.006:0,0.994,0.006	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.548:0.527,0.397,0.075	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.547:0.528,0.397,0.075	0|1:0.548:0.528,0.397,0.075	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.554:0.523,0.4,0.077	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.018:0.257,0.468,0.275	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19129676	SNP-3.19128435.	A	G	.	PASS	AR2=0.991;DR2=0.992;AF=0.263	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.116:0.887,0.109,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.116:0.888,0.109,0.003	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.116:0.887,0.109,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.116:0.887,0.109,0.003	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.116:0.887,0.109,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.699:0,0.301,0.699	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.024:0.977,0.023,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.116:0.887,0.109,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.116:0.887,0.109,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.116:0.887,0.109,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.116:0.888,0.109,0.003	0|0:0.116:0.887,0.109,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.116:0.887,0.109,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.116:0.887,0.109,0.003	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19130100	SNP-3.19128859.	A	G	.	PASS	AR2=0.993;DR2=0.994;AF=0.265	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.957,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.209:0.794,0.202,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.07:0.002,0.926,0.072	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.019:0.982,0.018,0	0|0:0:1,0,0	0|0:0.019:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.929,0.07,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.363:0.643,0.351,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.301:0.722,0.255,0.023	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.163:0.845,0.147,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19130299	SNP-3.19129058.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.245	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.957:0.001,0.042,0.957	1|1:1.944:0.001,0.055,0.945	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.965:0,0.034,0.965	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.981:0.019,0.981,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.953:0.001,0.046,0.954	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19133639	SNP-3.19132398.	A	G	.	PASS	AR2=0.993;DR2=0.993;AF=0.518	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.949:0.001,0.049,0.95	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.949:0.001,0.049,0.95	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.949:0.001,0.049,0.95	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.923:0.002,0.074,0.925	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	1|1:1.773:0.014,0.198,0.787	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.875:0.004,0.118,0.878	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.776:0.002,0.22,0.778	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0.005:0.995,0.005,0	1|1:1.957:0.001,0.042,0.957	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.761:0,0.239,0.761	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.97:0,0.029,0.97	0|0:0:1,0,0	1|1:1.927:0.002,0.069,0.929	1|1:1.908:0.003,0.087,0.91	0|0:0:1,0,0	1|1:1.928:0.001,0.07,0.929	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.949:0.001,0.049,0.95	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.949:0.001,0.049,0.95	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.949:0.001,0.049,0.95	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.949:0.001,0.049,0.95	1|1:1.964:0.001,0.035,0.965	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.949:0.001,0.049,0.95	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.957:0.001,0.041,0.958	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.911:0.002,0.084,0.913	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	19136653	SNP-3.19135412.	C	A	.	PASS	AR2=0.986;DR2=0.989;AF=0.371	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.252:0.773,0.203,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.234:0.789,0.187,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.301:0.727,0.245,0.028	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.38:0,0.62,0.38	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.058:0.942,0.058,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.137:0.875,0.114,0.012	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.234:0.789,0.188,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.404:0.653,0.29,0.057	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.301:0.729,0.24,0.031	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.234:0.789,0.187,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.269:0.755,0.222,0.023	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19136855	SNP-3.19135614.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.266	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.658:0,0.342,0.658	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.953,0.046,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.992:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19137832	SNP-3.19136591.	A	G	.	PASS	AR2=0.994;DR2=0.995;AF=0.223	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.427:0.586,0.4,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.818:0.211,0.76,0.029	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.327:0.682,0.31,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19138983	SNP-3.19137742.	A	G	.	PASS	AR2=0.987;DR2=0.99;AF=0.322	GT:DS:GP	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.063:0.938,0.06,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.485:0.588,0.339,0.073	0|0:0:1,0,0	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.156:0.85,0.144,0.006	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.138:0.867,0.128,0.005	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.143:0.863,0.132,0.005	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.113:0.891,0.106,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.102:0.901,0.097,0.003	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.107:0.896,0.101,0.003	0|0:0.163:0.844,0.149,0.007	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.128:0.872,0.128,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.088:0.915,0.083,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.173:0.834,0.158,0.008	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.011:0.989,0.011,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.397:0.619,0.365,0.016	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.115:0.889,0.108,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	19139036	SNP-3.19137795.	A	G	.	PASS	AR2=0.825;DR2=0.865;AF=0.282	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.134:0.87,0.125,0.005	0|1:1.115:0.198,0.489,0.313	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.099:0.205,0.49,0.304	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.463:0.6,0.338,0.063	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.251:0.144,0.461,0.395	0|1:1.33:0.116,0.437,0.447	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.091:0.209,0.491,0.3	0|1:1.085:0.212,0.492,0.297	0|1:1.1:0.205,0.49,0.305	1|1:2:0,0,1	1|0:0.642:0.402,0.554,0.044	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.237:0.78,0.204,0.017	0|0:0:1,0,0	0|0:0.164:0.845,0.145,0.009	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.62:0.479,0.423,0.099	1|1:2:0,0,1	1|0:1.193:0.165,0.478,0.357	0|0:0:1,0,0	1|0:1.245:0.153,0.449,0.398	1|0:1.111:0.179,0.53,0.291	0|1:0.608:0.479,0.433,0.087	1|0:1.148:0.154,0.544,0.302	0|0:0.463:0.59,0.356,0.053	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.666:0.459,0.416,0.125	1|0:0.816:0.356,0.472,0.172	1|1:2:0,0,1	1|1:1.576:0.046,0.332,0.622	0|0:0.11:0.894,0.101,0.004	1|1:1.539:0.054,0.353,0.593	0|1:0.621:0.477,0.424,0.098	0|0:0.786:0.372,0.471,0.157	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.44:0.085,0.391,0.524	0|0:0:1,0,0	1|0:1.113:0.2,0.486,0.314	0|0:0.557:0.525,0.393,0.082	1|0:0.991:0.246,0.517,0.237	1|0:1.055:0.217,0.512,0.271	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.664:0.043,0.25,0.707	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.234:0.164,0.438,0.398	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.492:0.533,0.443,0.024	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.018:0.982,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.983,0.017,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.308:0.124,0.444,0.432	1|0:1.282:0.15,0.418,0.432	0|0:0:1,0,0	0|0:0.463:0.603,0.332,0.065	1|1:2:0,0,1	0|1:1.115:0.198,0.489,0.313	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.636:0.468,0.428,0.104	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.095:0.207,0.491,0.302	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.095:0.207,0.491,0.302	0|0:0:1,0,0	1|1:1.094:0.208,0.491,0.302	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.343:0.111,0.436,0.454	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.936:0.227,0.61,0.163	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.02:0.98,0.02,0	1|1:1.216:0.142,0.501,0.358	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.38:0.101,0.418,0.481	1|1:1.526:0.067,0.34,0.593	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.301:0.124,0.45,0.426	0|1:1.095:0.207,0.491,0.302	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.396:0.094,0.416,0.49	1|1:2:0,0,1	1|1:1.263:0.145,0.448,0.408	0|0:0:1,0,0	1|1:1.095:0.207,0.491,0.302	0|1:0.758:0.386,0.471,0.143	1|0:0.906:0.301,0.493,0.207	0|0:0.107:0.896,0.1,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.208:0.093,0.606,0.301	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.351:0.691,0.267,0.042	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.117:0.884,0.115,0.001	1|0:0.673:0.443,0.442,0.116	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.161:0.062,0.714,0.224
+3	19139491	SNP-3.19138250.	A	G	.	PASS	AR2=0.982;DR2=0.987;AF=0.323	GT:DS:GP	1|1:1.233:0.162,0.444,0.394	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.502:0.066,0.367,0.567	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.302:0.179,0.341,0.481	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.064:0.197,0.542,0.261	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.868:0.009,0.115,0.877	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.463:0.065,0.407,0.528	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.382:0.675,0.269,0.057	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	19142199	SNP-3.19140958.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.376	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.089:0.913,0.085,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.156:0.851,0.142,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.141:0.865,0.13,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19142346	SNP-3.19141105.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.494	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.134:0.871,0.124,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.079:0.923,0.075,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.576:0.451,0.521,0.028	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.131:0.874,0.121,0.005	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19142467	SNP-3.19141226.	C	A	.	PASS	AR2=1;DR2=1;AF=0.354	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.965,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19142663	SNP-3.19141422.	A	G	.	PASS	AR2=0.99;DR2=0.991;AF=0.502	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.922:0.002,0.074,0.924	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.912:0.002,0.085,0.914	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.839:0.007,0.148,0.845	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.885:0.004,0.107,0.889	1|0:0.919:0.081,0.918,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.213:0.788,0.21,0.002	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.841:0.007,0.145,0.848	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.861:0.005,0.13,0.866	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.897:0.004,0.096,0.9	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.91:0.002,0.085,0.913	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.885:0.004,0.107,0.889	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.829:0.008,0.155,0.837	1|1:1.86:0.005,0.13,0.865	1|1:1.888:0.004,0.104,0.892	0|0:0:1,0,0	1|1:1.83:0.008,0.155,0.837	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.919:0.002,0.076,0.921	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.863:0.004,0.128,0.868	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.919:0.002,0.076,0.922	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1
+3	19144676	SNP-3.19143435.	A	G	.	PASS	AR2=1;DR2=1;AF=0.251	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19145269	SNP-3.19144028.	C	A	.	PASS	AR2=0.99;DR2=0.995;AF=0.438	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.326:0.117,0.44,0.443	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.305:0.154,0.388,0.459	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.177:0.827,0.169,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.202:0,0.798,0.202	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19145523	SNP-3.19144282.	A	G	.	PASS	AR2=0.993;DR2=0.994;AF=0.521	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	1|1:1.939:0.001,0.059,0.94	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.912:0.002,0.084,0.914	1|0:1:0,1,0	1|1:1.939:0.001,0.059,0.94	1|1:1.785:0.008,0.199,0.793	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.912:0.002,0.084,0.914	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.91:0.002,0.086,0.912	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.928:0.001,0.07,0.929	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.95:0.001,0.049,0.95	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.118:0.058,0.766,0.176	1|1:1.961:0,0.038,0.962	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.952,0.048,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.937:0.001,0.061,0.938	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.91:0.002,0.086,0.912	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.947:0.001,0.05,0.949	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.892:0.003,0.103,0.895	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.887:0.003,0.107,0.89	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.954:0.001,0.045,0.955	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.92:0.001,0.077,0.921	0|0:0:1,0,0	1|1:1.983:0,0.017,0.983	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	19146331	SNP-3.19145090.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.399	GT:DS:GP	0|0:0.078:0.923,0.075,0.002	1|1:2:0,0,1	0|0:0.231:0.782,0.204,0.013	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.248:0.767,0.217,0.016	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.929,0.069,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.132:0.873,0.122,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.05,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.211:0.801,0.188,0.012	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.119:0.885,0.111,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.026,0.973	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19149086	SNP-3.19147845.	A	G	.	PASS	AR2=0.993;DR2=0.994;AF=0.241	GT:DS:GP	1|1:1.956:0,0.044,0.956	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.971,0.029,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.864:0.005,0.126,0.869	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.936,0.064,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.977:0,0.022,0.978	1|1:2:0,0,1	0|1:1.381:0.012,0.595,0.393	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.027,0.973	1|1:2:0,0,1	1|1:1.98:0,0.019,0.981	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.936:0.001,0.062,0.937	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.824:0.009,0.157,0.834	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.976:0,0.024,0.976	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:1.937:0,0.063,0.937	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.928:0.002,0.069,0.93	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.968,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1
+3	19149479	SNP-3.19148238.	C	A	.	PASS	AR2=0.976;DR2=0.981;AF=0.305	GT:DS:GP	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.977:0,0.023,0.977	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.705:0.019,0.257,0.724	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1.103:0.145,0.607,0.248	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.721:0.016,0.247,0.737	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.622:0.036,0.307,0.658	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.732:0.014,0.239,0.746	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.956,0.044,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.652:0.032,0.285,0.683	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.018:0.983,0.017,0	0|0:0.402:0.652,0.295,0.054	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.576:0.042,0.339,0.619	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.721:0.027,0.226,0.747	0|1:1:0,1,0	1|1:1.556:0.071,0.303,0.627	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.92:0.004,0.073,0.923	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.683:0.039,0.239,0.722	0|1:1:0,1,0	0|0:0.015:0.985,0.015,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19149706	SNP-3.19148465.	C	A	.	PASS	AR2=0.947;DR2=0.96;AF=0.432	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.41:0.633,0.323,0.043	1|1:2:0,0,1	0|0:0.417:0.628,0.327,0.045	0|1:1:0,1,0	0|0:0.344:0.685,0.286,0.029	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.395:0.644,0.317,0.039	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.262:0.755,0.228,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.41:0.634,0.322,0.044	0|0:0.314:0.708,0.27,0.022	0|0:0.395:0.644,0.317,0.039	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.412:0.632,0.323,0.044	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.203:0.807,0.182,0.01	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.328:0.701,0.27,0.029	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0.001,0.998,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.001:0.999,0.001,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.356:0.677,0.291,0.033	0|0:0:1,0,0	0|0:0.354:0.679,0.289,0.032	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.388:0.649,0.314,0.037	1|1:1.987:0,0.013,0.987	0|0:0.353:0.679,0.289,0.032	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.417:0.628,0.327,0.045	0|0:0.369:0.666,0.3,0.034	0|0:0:1,0,0	0|0:0.293:0.73,0.247,0.023	0|0:0.412:0.632,0.324,0.044	0|0:0:1,0,0	1|0:0.731:0.403,0.463,0.134	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.38:0.658,0.304,0.038	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.367:0.671,0.292,0.037	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.185:0.829,0.157,0.014	0|0:0.364:0.67,0.297,0.034	0|0:0.335:0.693,0.28,0.028	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.189:0.82,0.171,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.68:0.436,0.447,0.116	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.341:0.689,0.282,0.03	0|1:0.458:0.594,0.354,0.052	0|0:0.219:0.793,0.195,0.012	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19151296	SNP-3.19150055.	C	A	.	PASS	AR2=0.99;DR2=0.992;AF=0.322	GT:DS:GP	0|0:0.018:0.982,0.018,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.863:0.005,0.128,0.868	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.745:0.016,0.222,0.761	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.738:0.013,0.236,0.751	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.737:0.018,0.227,0.755	1|1:2:0,0,1	1|1:1.749:0.014,0.223,0.763	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.823:0.007,0.162,0.83	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.032:0.968,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.823:0.009,0.159,0.832	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.946:0.001,0.052,0.947	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.771:0.013,0.203,0.784	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.984:0,0.015,0.984	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19156140	SNP-3.19154899.	A	G	.	PASS	AR2=0.995;DR2=0.995;AF=0.514	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.238:0.059,0.645,0.296	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.906:0.003,0.089,0.909	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.97:0,0.03,0.97	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.92:0.002,0.076,0.922	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.97:0,0.029,0.971	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.905:0.002,0.091,0.907	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.851:0.006,0.136,0.857	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.924:0.002,0.072,0.926	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.865:0.006,0.124,0.87	1|1:1.867:0.005,0.122,0.873	1|1:2:0,0,1	1|1:1.867:0.005,0.123,0.872	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	19158048	SNP-3.19156807.	C	A	.	PASS	AR2=0.911;DR2=0.935;AF=0.263	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.852:0.316,0.516,0.168	1|0:1.27:0.135,0.46,0.405	1|1:1.573:0.047,0.333,0.62	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.681:0.027,0.266,0.707	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|1:1.363:0.106,0.425,0.469	1|1:1.991:0,0.009,0.991	1|0:1:0,1,0	0|0:0:1,0,0	0|1:0.924:0.207,0.662,0.131	1|1:1.991:0,0.008,0.991	0|0:0:1,0,0	1|1:1.652:0.034,0.279,0.687	0|0:0:1,0,0	1|0:1.169:0.166,0.499,0.335	0|1:1.175:0.079,0.667,0.254	0|0:1.211:0.155,0.478,0.366	0|0:0.326:0.709,0.257,0.035	1|1:2:0,0,1	1|0:1.084:0.228,0.459,0.312	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.519:0.057,0.366,0.577	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1.423:0.084,0.408,0.507	0|1:0.878:0.255,0.612,0.133	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.458:0.073,0.396,0.531	1|0:1.522:0.057,0.365,0.578	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.549:0.05,0.35,0.599	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.489:0.067,0.378,0.555	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.366:0.1,0.433,0.466	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.752:0.016,0.216,0.768	1|1:2:0,0,1	1|1:1.912:0.004,0.081,0.916	1|1:2:0,0,1	1|1:1.446:0.075,0.404,0.521	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.481:0.069,0.381,0.55	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.488:0.067,0.377,0.556	0|0:0:1,0,0	1|1:1.41:0.091,0.408,0.501	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.84:0.015,0.13,0.855	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.429:0.084,0.402,0.514	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.39:0.093,0.424,0.483	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.382:0.655,0.308,0.037	1|1:1.555:0.045,0.356,0.599	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.344:0.081,0.494,0.425	0|0:0:1,0,0
+3	19158432	SNP-3.19157191.	C	A	.	PASS	AR2=0.974;DR2=0.981;AF=0.32	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.749:0.017,0.218,0.765	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.948,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.948,0.051,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.577:0.032,0.359,0.609	0|1:1:0,1,0	1|1:1.69:0.023,0.264,0.713	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.334:0.151,0.365,0.484	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.768:0.014,0.205,0.781	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.367:0.643,0.347,0.01	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.965:0,0.035,0.965	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.769:0.014,0.203,0.783	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.592:0.014,0.38,0.606	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.864:0.005,0.126,0.869	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.219:0.162,0.458,0.38	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.296:0.127,0.449,0.423	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.802:0.012,0.174,0.814	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.616:0.028,0.328,0.644	0|0:0:1,0,0
+3	19165258	SNP-3.19164017.	A	G	.	PASS	AR2=0.985;DR2=0.99;AF=0.498	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.963:0.001,0.036,0.963	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.544:0.029,0.397,0.574	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.834:0.003,0.159,0.837	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1.45:0.077,0.396,0.527	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.616:0.038,0.307,0.655	1|1:1.849:0.003,0.145,0.852	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.589:0.045,0.321,0.634	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.494:0.058,0.39,0.552	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.539:0.048,0.365,0.587	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19165316	SNP-3.19164075.	C	A	.	PASS	AR2=0.966;DR2=0.973;AF=0.416	GT:DS:GP	0|0:0.114:0.889,0.108,0.003	1|1:2:0,0,1	0|0:0.308:0.715,0.261,0.024	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.868:0.012,0.109,0.879	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0.326:0.71,0.253,0.037	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.349:0.687,0.278,0.035	0|0:0:1,0,0	0|0:0.429:0.613,0.346,0.042	0|0:0.301:0.722,0.255,0.023	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.303:0.72,0.257,0.023	0|0:0.302:0.721,0.256,0.023	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.754:0.372,0.502,0.126	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.38:0.659,0.303,0.039	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.11:0.893,0.104,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.12:0.884,0.113,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.113:0.891,0.106,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.12:0.884,0.113,0.004	0|0:0.114:0.889,0.107,0.003	0|0:0.144:0.862,0.132,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.916:0.002,0.08,0.918	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.929:0.001,0.068,0.931	1|1:1.958:0,0.042,0.958	1|1:2:0,0,1	1|1:1.758:0.011,0.221,0.768	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.939:0.001,0.059,0.94	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.929:0.001,0.068,0.931	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.132:0.871,0.127,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.936:0.001,0.062,0.937	1|1:2:0,0,1	0|0:0.281:0.731,0.258,0.011	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.206:0.809,0.177,0.015	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.463:0.607,0.322,0.07	0|0:0.3:0.722,0.255,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.115:0.888,0.109,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.924:0.001,0.075,0.925	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.12:0.884,0.113,0.004	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.123:0.881,0.115,0.004	0|0:0:1,0,0	0|0:0.096:0.907,0.09,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.297:0.725,0.253,0.022	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.951,0.049,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0
+3	19169014	SNP-3.19167773.	A	G	.	PASS	AR2=0.918;DR2=0.937;AF=0.447	GT:DS:GP	1|1:1.676:0.028,0.269,0.704	0|0:0:1,0,0	0|1:1.724:0.021,0.233,0.745	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.896:0.001,0.102,0.897	1|1:1.735:0.017,0.231,0.752	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.639:0.027,0.307,0.666	0|0:0:1,0,0	1|1:1.59:0.043,0.325,0.633	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.384:0.077,0.462,0.461	1|1:1.608:0.038,0.316,0.646	0|0:0:1,0,0	1|1:1.706:0.026,0.242,0.732	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.793:0.011,0.185,0.804	1|1:2:0,0,1	1|0:1.335:0.118,0.429,0.453	1|1:2:0,0,1	1|1:1.732:0.017,0.233,0.749	0|0:0:1,0,0	1|1:1.742:0.016,0.225,0.759	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.594:0.042,0.323,0.635	1|1:1.936:0,0.063,0.936	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.665:0.028,0.278,0.693	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.591:0.042,0.325,0.633	1|1:2:0,0,1	1|1:1.59:0.042,0.325,0.633	0|0:0:1,0,0	1|1:1.589:0.043,0.326,0.631	0|1:1.58:0.044,0.332,0.624	1|1:1.665:0.028,0.279,0.693	0|0:0.032:0.969,0.03,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.669:0.031,0.269,0.7	1|0:1:0,1,0	1|1:1.954:0,0.045,0.955	1|1:1.587:0.043,0.327,0.63	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.639:0.032,0.298,0.671	1|1:2:0,0,1	1|1:1.668:0.031,0.27,0.699	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.587:0.043,0.327,0.63	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.678:0.023,0.276,0.701	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.665:0.031,0.274,0.695	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.796:0.204,0.796,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.486:0.098,0.318,0.584	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.67:0.029,0.272,0.699	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.315:0.121,0.444,0.435	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.594:0.045,0.317,0.639	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.617:0.036,0.311,0.653	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.628:0.034,0.304,0.662	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.658:0.031,0.28,0.689	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.706:0.021,0.251,0.727	1|1:2:0,0,1	0|1:1.56:0.048,0.344,0.608	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.589:0.043,0.326,0.631	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.59:0.042,0.325,0.632	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.427:0.078,0.417,0.505	1|1:1.728:0.022,0.229,0.749	1|1:1.713:0.022,0.242,0.735	0|0:0:1,0,0	1|1:1.627:0.037,0.299,0.664	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.673:0.031,0.265,0.704	1|1:1.946:0.001,0.052,0.947	1|1:1.937:0.002,0.06,0.939	1|1:2:0,0,1	1|1:1.614:0.037,0.313,0.651	1|1:1.711:0.023,0.244,0.734	1|1:1.659:0.03,0.28,0.689	1|1:2:0,0,1	1|1:1.591:0.042,0.324,0.633	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.937:0.001,0.061,0.938	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.667:0.031,0.271,0.698
+3	19172308	SNP-3.19171067.	A	G	.	PASS	AR2=0.982;DR2=0.984;AF=0.259	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.165:0.842,0.151,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.085:0.918,0.08,0.002	0|0:0:1,0,0	0|0:0.172:0.836,0.157,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.861:0.005,0.129,0.866	1|1:1.896:0.003,0.098,0.899	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.872:0.004,0.119,0.877	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.856:0.006,0.132,0.862	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.872:0.004,0.12,0.876	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.847:0.005,0.142,0.852	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.902:0.003,0.091,0.905	1|1:1.687:0.012,0.288,0.699	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.119:0.885,0.112,0.004	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.07:0.932,0.066,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.881:0.004,0.112,0.885	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.901:0.003,0.093,0.904	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.916:0.002,0.08,0.918	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.108:0.896,0.101,0.003	0|0:0.131:0.873,0.123,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.934:0.002,0.062,0.936	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.978,0.022,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.873:0.004,0.118,0.877	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.089:0.913,0.084,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.132:0.873,0.122,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.842:0.007,0.144,0.849	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.106:0.897,0.1,0.003	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.9:0.003,0.094,0.903
+3	19177904	SNP-3.19176663.	A	G	.	PASS	AR2=0.891;DR2=0.922;AF=0.392	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.505:0.061,0.373,0.566	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.041:0.96,0.04,0	1|1:2:0,0,1	0|1:1.19:0.143,0.523,0.334	1|1:1.315:0.122,0.441,0.437	1|1:2:0,0,1	0|1:0.904:0.312,0.472,0.216	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.648:0.033,0.287,0.68	0|0:0:1,0,0	1|1:1.443:0.069,0.419,0.512	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.602:0.04,0.318,0.642	0|1:1.082:0.213,0.491,0.296	1|1:1.554:0.045,0.355,0.599	1|1:1.41:0.083,0.424,0.493	1|1:2:0,0,1	1|1:1.234:0.15,0.466,0.384	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.353:0.108,0.431,0.461	1|1:1.562:0.048,0.343,0.609	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.574:0.048,0.329,0.623	1|1:2:0,0,1	1|1:1.598:0.044,0.314,0.642	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.25:0.15,0.45,0.4	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.575:0.044,0.337,0.619	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.725:0.022,0.23,0.747	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.701:0.023,0.252,0.725	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.169:0.835,0.16,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.706:0.302,0.689,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.017,0	0|0:0:1,0,0	0|0:0.115:0.889,0.106,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.078:0.924,0.074,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.595:0.045,0.316,0.639	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.55:0.052,0.345,0.603	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.59:0.043,0.325,0.632	1|1:1.583:0.041,0.335,0.624	1|0:1.39:0.094,0.422,0.484	0|0:0:1,0,0	0|1:1.341:0.114,0.432,0.454	1|1:2:0,0,1	0|0:0.057:0.944,0.055,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.648:0.033,0.287,0.68	1|1:1.614:0.037,0.311,0.652	1|0:1.374:0.088,0.45,0.462	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.333:0.122,0.422,0.456	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.531:0.055,0.358,0.586	1|1:1.628:0.042,0.288,0.67	1|1:2:0,0,1	1|1:1.72:0.025,0.23,0.745	0|0:0:1,0,0	0|0:0.051:0.952,0.045,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.539:0.055,0.352,0.594	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.524:0.061,0.353,0.585	1|1:1.639:0.034,0.293,0.673	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.338:0.114,0.433,0.452	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.338:0.114,0.433,0.453	1|1:2:0,0,1	1|1:1.332:0.116,0.436,0.448	0|0:0:1,0,0	1|1:1.338:0.114,0.433,0.453	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.216:0.176,0.433,0.391	0|1:1.336:0.115,0.435,0.451	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.648:0.033,0.287,0.681	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.357:0.114,0.414,0.471	0|0:0:1,0,0	1|1:1.339:0.113,0.434,0.453	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19178113	SNP-3.19176872.	C	A	.	PASS	AR2=0.985;DR2=0.989;AF=0.263	GT:DS:GP	1|1:1.405:0.136,0.323,0.541	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.707:0.294,0.706,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.598:0.046,0.31,0.644	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.924:0.002,0.072,0.926	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.148:0.852,0.148,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.125:0.88,0.115,0.005	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.749:0.039,0.173,0.788	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0.735:0.343,0.579,0.078	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	19178400	SNP-3.19177159.	C	A	.	PASS	AR2=0.986;DR2=0.988;AF=0.428	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.868:0.009,0.114,0.877	1|1:1.835:0.006,0.153,0.841	1|1:1.772:0.004,0.219,0.777	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.959,0.04,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.858:0.003,0.136,0.861	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.084:0.917,0.082,0.001	0|0:0.006:0.994,0.006,0	1|1:1.908:0.006,0.081,0.914	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.827:0.009,0.156,0.836	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:1.889:0.003,0.105,0.892	1|1:1.799:0.011,0.179,0.81	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.811:0.007,0.175,0.818	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.012,0.987	1|0:0.834:0.178,0.81,0.012	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.825:0.006,0.162,0.831	1|1:1.715:0.005,0.274,0.72	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:1.952:0.002,0.044,0.954	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.81:0.009,0.173,0.819	1|1:1.84:0.006,0.149,0.846	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.031:0.969,0.031,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.043:0.957,0.043,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.962:0.001,0.036,0.963	1|1:1.856:0.006,0.132,0.862	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.847:0.006,0.142,0.853	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.873:0.005,0.117,0.878	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.858:0.006,0.131,0.864	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19178485	SNP-3.19177244.	C	A	.	PASS	AR2=0.991;DR2=0.993;AF=0.286	GT:DS:GP	1|1:1.538:0.077,0.309,0.614	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.001:0,0.999,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.076:0.926,0.073,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.063:0.007,0.922,0.071	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.062:0.939,0.06,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.054:0.947,0.052,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.921:0.094,0.892,0.014	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.134:0.872,0.123,0.005	1|0:1.112:0,0.888,0.112	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.056:0.946,0.053,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.936,0.063,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.058:0.943,0.056,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.912:0.102,0.884,0.014	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.122:0.885,0.108,0.007	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19178506	SNP-3.19177265.	C	A	.	PASS	AR2=0.996;DR2=0.996;AF=0.278	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.731:0.012,0.244,0.744	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.069:0.007,0.917,0.076	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.901:0.114,0.872,0.014	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.131:0.874,0.121,0.005	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.884:0.129,0.858,0.013	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.966:0.034,0.966,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19181841	SNP-3.19180600.	C	A	.	PASS	AR2=0.967;DR2=0.975;AF=0.319	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.964:0.001,0.035,0.965	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.929:0.004,0.064,0.932	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.951:0,0.048,0.951	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:0.984:0.256,0.503,0.24	1|1:2:0,0,1	0|0:0.614:0.425,0.536,0.039	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.952:0.002,0.043,0.954	1|1:2:0,0,1	1|1:1.803:0.005,0.188,0.807	1|1:2:0,0,1	1|1:1.442:0.039,0.479,0.482	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.806:0.009,0.175,0.815	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.914:0.002,0.082,0.916	1|0:1.005:0.071,0.853,0.076	1|1:1.964:0.001,0.035,0.965	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.582:0.012,0.395,0.594	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.892:0.386,0.336,0.278	1|0:1.156:0.144,0.557,0.3	1|1:1.544:0.033,0.391,0.577	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.843:0.008,0.14,0.851	1|1:2:0,0,1	1|1:1.744:0.015,0.225,0.76	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0.001,0.031,0.969	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.931:0.004,0.062,0.934	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.043:0.244,0.47,0.287	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.942:0.001,0.056,0.943	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.968:0,0.031,0.969	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.87:0.001,0.128,0.871	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.897:0.002,0.099,0.899	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.958:0,0.041,0.958	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.922:0.003,0.073,0.924	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.622:0.017,0.343,0.639	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19181864	SNP-3.19180623.	A	G	.	PASS	AR2=0.954;DR2=0.967;AF=0.471	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.77:0.001,0.227,0.771	1|1:1.605:0.04,0.315,0.645	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.574:0.044,0.338,0.618	1|0:1.376:0.089,0.446,0.465	1|1:1.752:0.018,0.213,0.77	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.486:0.067,0.379,0.553	1|1:1.528:0.049,0.375,0.576	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.537:0.055,0.353,0.592	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.593:0.042,0.323,0.635	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.93:0,0.07,0.93	1|1:1.722:0.01,0.257,0.732	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	1|1:1.859:0.002,0.137,0.861	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.944:0.001,0.055,0.945	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.945:0.001,0.054,0.945	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.961:0,0.038,0.961	1|1:1.955:0.001,0.044,0.956	1|1:1.815:0.009,0.167,0.824	1|0:1.302:0.017,0.664,0.319	1|1:2:0,0,1	1|1:1.777:0.006,0.211,0.783	1|1:1.917:0.001,0.081,0.918	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.953:0.001,0.046,0.953	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.593:0.041,0.325,0.634	1|1:1.963:0,0.037,0.963	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.557:0.052,0.339,0.609	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.614:0.043,0.3,0.657	0|0:0:1,0,0	1|1:1.968:0,0.032,0.968	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.431:0.078,0.414,0.508	1|1:2:0,0,1	1|1:1.568:0.046,0.341,0.614	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.614:0.041,0.303,0.656	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0,0.031,0.968	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.947:0.001,0.052,0.948	0|1:1.623:0.037,0.304,0.66	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.603:0.04,0.317,0.643	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:1.947:0.001,0.052,0.948	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.476:0.071,0.382,0.547	0|0:0:1,0,0	1|1:1.939:0,0.06,0.939	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	19193977	SNP-3.19192736.	C	A	.	PASS	AR2=0.977;DR2=0.983;AF=0.381	GT:DS:GP	0|0:0.13:0.874,0.121,0.004	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.163:0.847,0.143,0.01	0|0:0.133:0.871,0.125,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.114:0.889,0.108,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.106:0.897,0.101,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.718:0.001,0.28,0.719	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|0:1.093:0.004,0.9,0.097	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.818:0.415,0.353,0.233	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.106:0.898,0.099,0.003	1|1:2:0,0,1	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.56:0.018,0.404,0.578	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.347:0.665,0.323,0.012	0|0:0.002:0.998,0.002,0	0|0:0.122:0.881,0.115,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.104:0.899,0.098,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.109:0.893,0.105,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.129:0.877,0.117,0.006	0|0:0:1,0,0	0|0:0.102:0.901,0.096,0.003	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.103:0.9,0.097,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.106:0.897,0.101,0.003	0|0:0.11:0.894,0.102,0.004	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0.121:0.883,0.114,0.003	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.25:0.765,0.22,0.015	1|1:2:0,0,1	0|0:0.121:0.883,0.113,0.004	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.091:0.911,0.087,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.052:0.952,0.045,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.12:0.883,0.114,0.003	0|0:0:1,0,0	0|0:0.105:0.898,0.098,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19194196	SNP-3.19192955.	A	G	.	PASS	AR2=1;DR2=1;AF=0.251	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19194737	SNP-3.19193496.	C	A	.	PASS	AR2=1;DR2=1;AF=0.465	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0,0.032,0.968	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19198829	SNP-3.19197588.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.209	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.024:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.953,0.047,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.965,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.062:0.941,0.057,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19204549	SNP-3.19203308.	C	A	.	PASS	AR2=0.997;DR2=0.998;AF=0.345	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.019,0.981	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.6:0.034,0.332,0.634	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.956:0,0.043,0.956	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.955:0.001,0.042,0.956	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19207080	SNP-3.19205839.	C	A	.	PASS	AR2=0.992;DR2=0.994;AF=0.427	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.959:0,0.04,0.96	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.9:0.004,0.093,0.903	1|1:1.93:0.001,0.068,0.931	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.901:0.002,0.096,0.902	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.864:0.002,0.132,0.866	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.831:0.005,0.159,0.836	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.968:0,0.032,0.968	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.962:0,0.038,0.962	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.967:0,0.032,0.968	1|1:1.948:0.001,0.051,0.949	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.958:0,0.041,0.959	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.839:0.008,0.145,0.847	1|1:1.964:0.001,0.034,0.965	1|1:2:0,0,1	1|1:1.854:0.009,0.128,0.863	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.45:0.073,0.404,0.523	1|1:2:0,0,1	0|0:0:1,0,0
+3	19207198	SNP-3.19205957.	A	G	.	PASS	AR2=0.964;DR2=0.972;AF=0.498	GT:DS:GP	1|1:1.822:0.008,0.162,0.83	0|0:0:1,0,0	1|1:1.826:0.009,0.155,0.836	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.859:0.005,0.131,0.864	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.899:0.004,0.094,0.902	0|0:0:1,0,0	1|1:1.839:0.007,0.147,0.846	1|1:1.864:0.006,0.125,0.87	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.843:0.006,0.146,0.848	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.725:0.012,0.25,0.738	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.81:0.011,0.168,0.821	1|1:1.857:0.006,0.132,0.863	1|1:1.819:0.009,0.163,0.828	1|1:2:0,0,1	1|1:1.823:0.008,0.161,0.831	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.732:0.01,0.248,0.742	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.865:0.004,0.126,0.869	1|1:1.821:0.008,0.162,0.829	1|1:2:0,0,1	1|1:1.804:0.01,0.176,0.814	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.565:0.016,0.404,0.58	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.806:0.008,0.178,0.814	1|0:1.219:0.059,0.662,0.279	1|1:1.783:0.012,0.194,0.794	1|1:1.674:0.02,0.285,0.694	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.851:0.006,0.137,0.857	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.337:0.045,0.573,0.382	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.852:0.005,0.137,0.857	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.824:0.008,0.16,0.832	1|1:2:0,0,1	1|1:1.855:0.008,0.13,0.863	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.868:0.005,0.122,0.873	1|1:1.837:0.006,0.151,0.843	1|1:1.822:0.008,0.162,0.83	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.736:0.545,0.173,0.282	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.851:0.006,0.137,0.857	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.428:0.616,0.341,0.044	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.853:0.005,0.137,0.858	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.87:0.005,0.12,0.875	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.835:0.006,0.152,0.841	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.024:0.976,0.024,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	19207283	SNP-3.19206042.	C	A	.	PASS	AR2=1;DR2=1;AF=0.463	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19207843	SNP-3.19206602.	C	A	.	PASS	AR2=0.965;DR2=0.973;AF=0.318	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.794:0.013,0.181,0.807	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.671:0.035,0.258,0.706	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.592:0.416,0.577,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.416:0.093,0.399,0.509	1|1:1.736:0.017,0.229,0.754	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.75:0.016,0.218,0.766	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.71:0.014,0.261,0.725	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.641:0.034,0.291,0.675	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.604:0.034,0.328,0.638	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.673:0.029,0.268,0.702	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.629:0.028,0.315,0.657	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.803:0.014,0.168,0.817	1|1:2:0,0,1	1|1:1.908:0.004,0.084,0.912	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.831:0.008,0.153,0.839	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.748:0.017,0.217,0.766	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.798:0.01,0.181,0.809	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.508:0.073,0.347,0.58	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.808:0.01,0.173,0.817	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.714:0.014,0.257,0.728	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.509:0.062,0.367,0.571	1|1:1.822:0.018,0.143,0.84	1|1:1.989:0,0.011,0.989	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.854:0.007,0.132,0.861	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.716:0.023,0.239,0.738	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19210587	SNP-3.19209346.	A	G	.	PASS	AR2=1;DR2=1;AF=0.253	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.959,0.04,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19213861	SNP-3.19212620.	A	G	.	PASS	AR2=0.99;DR2=0.992;AF=0.488	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.852:0.003,0.142,0.855	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.559:0.063,0.314,0.622	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.872:0.003,0.122,0.875	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.937:0.001,0.062,0.938	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.953:0.001,0.046,0.954	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.917:0.002,0.08,0.919	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.798:0.008,0.185,0.807	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.761:0.016,0.206,0.777	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.817:0.005,0.172,0.823	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.824:0.008,0.159,0.833	1|1:1.933:0.001,0.064,0.935	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.896:0.003,0.097,0.899	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.845:0.003,0.149,0.848	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	19214991	SNP-3.19213750.	A	G	.	PASS	AR2=0.97;DR2=0.977;AF=0.224	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.041:0.959,0.041,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.055:0.945,0.055,0	0|0:0:1,0,0	0|0:0.075:0.925,0.074,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.763:0.014,0.208,0.778	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.691:0.026,0.258,0.716	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.39:0.065,0.48,0.455	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.733:0.017,0.233,0.75	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.658:0.027,0.288,0.685	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.884:0.14,0.837,0.024	0|1:1:0,1,0	1|1:1.748:0.013,0.226,0.761	1|0:1.356:0.079,0.486,0.435	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.937,0.062,0.001	0|0:0:1,0,0	1|1:1.817:0.01,0.163,0.827	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.564:0.443,0.551,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.957,0.043,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.158:0.847,0.147,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.718:0.02,0.241,0.739	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.959,0.04,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.85:0.008,0.135,0.858	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.582:0.053,0.312,0.635	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19217756	SNP-3.19216515.	C	A	.	PASS	AR2=0.987;DR2=0.989;AF=0.389	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.946,0.053,0.001	0|0:0.111:0.892,0.104,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0.078:0.924,0.074,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.96,0.04,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.101:0.902,0.096,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.94,0.059,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.302:0.705,0.289,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.269:0.745,0.242,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.062:0.939,0.06,0.001	0|1:1:0,1,0	0|0:0.185:0.82,0.175,0.005	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.763:0.243,0.751,0.006	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.754:0.251,0.744,0.005	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.134:0.874,0.118,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.947,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.099:0.903,0.095,0.002	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.959,0.04,0.001	0|0:0:1,0,0	0|0:0.182:0.821,0.177,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.921,0.079,0.001	0|0:0:1,0,0	0|0:0.339:0.662,0.338,0.001	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.068:0.933,0.066,0.001	0|0:0:1,0,0	0|0:0.059:0.942,0.057,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.055:0.945,0.055,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19217918	SNP-3.19216677.	C	A	.	PASS	AR2=0.971;DR2=0.977;AF=0.346	GT:DS:GP	0|0:0.107:0.897,0.098,0.004	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.884:0.003,0.109,0.887	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.801:0.015,0.17,0.816	0|0:0.062:0.939,0.06,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.062:0.939,0.061,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.092:0.911,0.087,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.153:0.852,0.142,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.098:0.904,0.094,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.968:0.001,0.03,0.969	1|1:1.687:0.027,0.26,0.713	1|1:2:0,0,1	1|1:1.517:0.057,0.369,0.574	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.92:0.001,0.077,0.922	1|1:2:0,0,1	1|1:1.702:0.014,0.271,0.715	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.55:0.046,0.359,0.595	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.485:0.058,0.398,0.544	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.696:0.024,0.255,0.721	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.897:0.002,0.099,0.899	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.747:0.01,0.234,0.757	1|1:1.925:0.002,0.072,0.926	0|0:0:1,0,0	1|1:1.796:0.013,0.179,0.808	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.884:0.004,0.108,0.888	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.884:0.003,0.111,0.886	1|1:1.904:0.002,0.092,0.906	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.952:0.001,0.045,0.954	1|1:1.881:0.003,0.112,0.884	1|1:2:0,0,1	0|0:0.03:0.97,0.03,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.946,0.054,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.928,0.07,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.892:0.003,0.102,0.895	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.67:0.022,0.286,0.692	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.957,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.066:0.935,0.063,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.895:0.003,0.098,0.898	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.133:0.874,0.119,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.898:0.003,0.096,0.901	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.939:0.001,0.058,0.941	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.818:0.008,0.165,0.826	1|1:1.694:0.007,0.292,0.701	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19218405	SNP-3.19217164.	C	A	.	PASS	AR2=0.977;DR2=0.982;AF=0.326	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.923:0.002,0.073,0.925	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.89:0.003,0.103,0.894	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.261:0.12,0.5,0.38	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1.252:0.114,0.52,0.366	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.525:0.054,0.367,0.579	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.036:0.964,0.036,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.956:0.001,0.043,0.956	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.483:0.063,0.391,0.546	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.721:0.015,0.249,0.736	0|0:0.496:0.53,0.443,0.027	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.869:0.004,0.122,0.873	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.914:0.002,0.082,0.916	1|1:1.933:0.001,0.065,0.934	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.937:0.001,0.061,0.938	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.571:0.036,0.357,0.607	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.914:0.002,0.082,0.916	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.055:0.946,0.053,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.952:0.001,0.047,0.953	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.905:0.002,0.092,0.907	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.97,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.895:0.003,0.098,0.899	1|1:2:0,0,1	1|1:1.948:0.001,0.05,0.949	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.861:0.002,0.134,0.863	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	19218540	SNP-3.19217299.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.359	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.036:0.964,0.036,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.735:0,0.265,0.735	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19222783	SNP-3.19221542.	A	G	.	PASS	AR2=0.99;DR2=0.992;AF=0.498	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.706:0.028,0.238,0.734	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.872:0.004,0.12,0.876	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.865:0.009,0.117,0.874	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.827:0.01,0.154,0.836	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.856:0.004,0.136,0.86	1|1:2:0,0,1	1|1:1.658:0.048,0.246,0.706	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.946:0.001,0.052,0.947	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.87:0.003,0.123,0.874	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.959,0.04,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.97,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.725:0.008,0.259,0.733	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.878:0.004,0.114,0.882	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.821:0.01,0.159,0.831	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.967:0,0.033,0.967	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	19223361	SNP-3.19222120.	A	G	.	PASS	AR2=0.904;DR2=0.927;AF=0.527	GT:DS:GP	1|0:1.191:0.165,0.48,0.356	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.896:0.003,0.098,0.899	1|1:2:0,0,1	0|1:1.143:0.168,0.522,0.31	1|1:2:0,0,1	1|1:1.92:0.002,0.077,0.921	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.844:0.004,0.147,0.848	1|1:1.827:0.006,0.162,0.832	0|0:0.842:0.342,0.474,0.184	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.303:0.124,0.449,0.427	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.221:0.145,0.488,0.367	1|0:1.193:0.158,0.49,0.351	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.301:0.125,0.45,0.425	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.187:0.163,0.486,0.35	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.331:0.73,0.209,0.061	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.174:0.163,0.5,0.337	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.96:0.001,0.039,0.96	1|1:1.347:0.107,0.439,0.454	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.071:0.197,0.535,0.268	0|1:1:0,1,0	1|1:1.363:0.102,0.433,0.465	1|1:1.218:0.146,0.49,0.364	1|1:1.379:0.097,0.427,0.476	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.301:0.125,0.45,0.425	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.367:0.101,0.432,0.467	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	1|1:1.822:0.002,0.173,0.824	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.241:0.146,0.466,0.388	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.362:0.102,0.433,0.464	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.303:0.12,0.458,0.422	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.909:0.002,0.087,0.911	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.332:0.112,0.445,0.444	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.318:0.115,0.452,0.433	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.287:0.129,0.455,0.416	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.181:0.169,0.48,0.35	1|1:2:0,0,1	1|0:1.07:0.237,0.456,0.307	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1.175:0.168,0.489,0.343	0|0:0:1,0,0	1|1:1.791:0.003,0.203,0.794	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.347:0.107,0.439,0.454	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.36:0.103,0.434,0.463	1|1:1.228:0.141,0.49,0.369	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.908:0.002,0.087,0.911	1|1:1.999:0,0.001,0.999	0|1:1.363:0.102,0.433,0.465	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.309:0.12,0.452,0.429	1|1:1.36:0.103,0.434,0.463	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.328:0.114,0.443,0.443	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.362:0.102,0.433,0.464
+3	19225307	SNP-3.19224066.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.349	GT:DS:GP	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.793:0.009,0.188,0.803	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.938:0.001,0.061,0.938	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.918:0,0.082,0.918	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.767:0.009,0.214,0.776	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.027,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.821:0.01,0.16,0.83	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19238836	SNP-3.19237595.	C	A	.	PASS	AR2=0.988;DR2=0.991;AF=0.355	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.271:0.741,0.247,0.012	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.158:0.848,0.145,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.171:0.838,0.153,0.009	0|1:1:0,1,0	0|0:0.127:0.878,0.117,0.005	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.624:0.037,0.303,0.66	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.627:0.035,0.303,0.662	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.771:0.004,0.221,0.775	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.961,0.037,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.144:0.862,0.133,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.132:0.874,0.121,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.262:0.752,0.235,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.048:0.952,0.048,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19238905	SNP-3.19237664.	C	A	.	PASS	AR2=0.95;DR2=0.957;AF=0.333	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.17:0.166,0.498,0.336	1|1:2:0,0,1	0|0:0.317:0.694,0.296,0.011	0|0:0.299:0.709,0.282,0.009	0|0:0:1,0,0	0|0:0.076:0.926,0.073,0.001	0|0:0.057:0.944,0.055,0.001	1|1:2:0,0,1	0|0:0.048:0.953,0.046,0.001	1|1:2:0,0,1	1|1:1.955:0.001,0.044,0.956	0|0:0.064:0.938,0.061,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.947,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.133:0.872,0.123,0.005	0|0:0:1,0,0	0|0:0.121:0.883,0.114,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.242:0.829,0.101,0.071	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.226:0.788,0.199,0.013	0|0:0.096:0.907,0.09,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0.102:0.901,0.097,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.237:0.116,0.531,0.353	1|1:2:0,0,1	1|1:1.167:0.174,0.486,0.341	1|0:1.129:0.189,0.492,0.319	1|0:1.118:0.182,0.518,0.3	1|0:1.192:0.164,0.481,0.355	0|1:1.109:0.198,0.495,0.307	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.373:0.092,0.443,0.465	0|0:0:1,0,0	1|1:1.947:0.001,0.051,0.948	0|0:0.143:0.863,0.132,0.005	1|1:1.846:0.004,0.147,0.849	1|1:1.741:0.01,0.24,0.75	1|1:2:0,0,1	0|0:0.074:0.926,0.074,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.394:0.027,0.552,0.421	0|1:1.142:0.184,0.49,0.326	0|1:1.488:0.026,0.46,0.514	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.15:0.209,0.432,0.359	0|0:0:1,0,0	1|1:1.966:0,0.033,0.967	1|1:1.935:0.001,0.062,0.937	1|1:2:0,0,1	1|1:1.939:0.003,0.056,0.941	1|1:1.772:0.008,0.212,0.78	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.943:0,0.056,0.943	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	1|1:1.935:0.001,0.063,0.936	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.96:0,0.039,0.96	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.076:0.926,0.073,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.899:0.002,0.097,0.901	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.972:0,0.028,0.972	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.824:0.029,0.118,0.853	0|0:0.12:0.883,0.114,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.905:0.002,0.091,0.907	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.896:0.003,0.098,0.899	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.924:0.002,0.072,0.926	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.962:0,0.037,0.963	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.695:0.014,0.278,0.708	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19241250	SNP-3.19240009.	A	G	.	PASS	AR2=0.995;DR2=0.996;AF=0.266	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.749:0.018,0.216,0.766	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.736:0.02,0.224,0.756	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.064:0.937,0.063,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.254:0.786,0.174,0.04	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	19243170	SNP-3.19241929.	A	G	.	PASS	AR2=0.973;DR2=0.977;AF=0.503	GT:DS:GP	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.94:0.001,0.058,0.941	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.873:0.005,0.117,0.878	1|1:1.855:0.005,0.134,0.861	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.909:0.002,0.088,0.91	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.81:0.013,0.164,0.823	0|0:0:1,0,0	1|1:1.853:0.006,0.134,0.86	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.855:0.006,0.132,0.862	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.945:0.001,0.054,0.945	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.893:0,0.107,0.893	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.714:0.032,0.222,0.746	1|1:1.805:0.009,0.177,0.814	1|1:2:0,0,1	1|1:1.81:0.008,0.175,0.818	1|1:1.663:0.023,0.291,0.686	0|1:1.291:0.041,0.626,0.332	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1.593:0.026,0.356,0.619	0|0:0:1,0,0	1|1:1.627:0.055,0.263,0.682	0|0:0:1,0,0	1|1:1.94:0.001,0.057,0.941	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.945:0.001,0.053,0.946	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.764:0.011,0.214,0.775	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.898:0.003,0.096,0.901	1|1:1.971:0,0.029,0.971	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.607:0.025,0.343,0.632	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.633:0.022,0.323,0.655	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.117:0.883,0.117,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.899:0.002,0.096,0.901	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.864:0.005,0.126,0.869	1|1:1.901:0.002,0.094,0.903	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.96:0,0.039,0.96	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.944:0.001,0.055,0.945	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.92:0.002,0.076,0.922	1|1:1.873:0.004,0.12,0.877	1|1:2:0,0,1	1|1:1.787:0.026,0.161,0.813	1|1:1.847:0.006,0.14,0.854	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.002:0.998,0.002,0	1|1:1.877:0.004,0.116,0.881	1|1:2:0,0,1	1|1:1.844:0.006,0.143,0.85	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.938:0.001,0.06,0.939	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.902:0.003,0.092,0.905	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.834:0.008,0.15,0.842	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.953:0.001,0.046,0.954	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.971:0,0.029,0.971	1|1:1.984:0,0.016,0.984	0|0:0:1,0,0	1|1:2:0,0,1
+3	19243554	SNP-3.19242313.	C	A	.	PASS	AR2=1;DR2=1;AF=0.362	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.018:0.982,0.018,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19246770	SNP-3.19245529.	A	G	.	PASS	AR2=0.998;DR2=0.999;AF=0.259	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.94,0.055,0.005	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.931:0,0.069,0.931	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.037:0.965,0.034,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.098:0.902,0.097,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19247694	SNP-3.19246453.	C	A	.	PASS	AR2=1;DR2=1;AF=0.37	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.03:0.97,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19247862	SNP-3.19246621.	C	A	.	PASS	AR2=0.997;DR2=0.997;AF=0.366	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.985:0.304,0.408,0.289	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.05:0.95,0.05,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.068:0.935,0.063,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19248594	SNP-3.19247353.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.356	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.034:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.859:0.004,0.133,0.863	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19248842	SNP-3.19247601.	C	A	.	PASS	AR2=1;DR2=1;AF=0.354	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19248864	SNP-3.19247623.	C	A	.	PASS	AR2=1;DR2=1;AF=0.358	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19248886	SNP-3.19247645.	C	A	.	PASS	AR2=1;DR2=1;AF=0.364	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.028:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0.049:0.951,0.049,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19251900	SNP-3.19250659.	C	A	.	PASS	AR2=0.987;DR2=0.988;AF=0.392	GT:DS:GP	0|0:0.055:0.946,0.053,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.134:0.87,0.126,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.035:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|1:1:0,1,0	0|0:0.119:0.885,0.112,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.193:0.817,0.173,0.01	0|0:0.195:0.816,0.172,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.15:0.858,0.133,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.065:0.936,0.064,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.182:0.824,0.169,0.006	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.066:0.936,0.062,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.105:0.897,0.1,0.002	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.115:0.888,0.108,0.003	0|0:0:1,0,0	0|0:0.089:0.914,0.084,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.044:0.957,0.043,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.091:0.91,0.089,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	1|0:1.214:0.157,0.472,0.371	1|1:2:0,0,1	0|0:0.039:0.961,0.039,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.023:0.044,0.889,0.067	0|0:0.04:0.961,0.039,0.001	1|1:2:0,0,1	0|0:0.067:0.934,0.065,0.001	0|0:0:1,0,0	0|0:0.034:0.967,0.033,0	0|0:0:1,0,0	0|0:0.041:0.959,0.041,0	1|1:2:0,0,1	0|0:0.114:0.892,0.102,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.131:0.877,0.114,0.008	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.969,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.017:0.983,0.017,0	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19251932	SNP-3.19250691.	A	G	.	PASS	AR2=0.989;DR2=0.991;AF=0.246	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.952,0.046,0.002	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.908:0.003,0.087,0.91	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.219:0.792,0.197,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.221:0.791,0.198,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.14:0.861,0.139,0	0|0:0:1,0,0	0|0:0.192:0.815,0.179,0.006	0|0:0:1,0,0	0|0:0.018:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.399:0.651,0.299,0.05	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.955:0,0.045,0.955	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.943,0.053,0.004	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.202:0.807,0.185,0.008	0|0:0:1,0,0
+3	19252276	SNP-3.19251035.	A	G	.	PASS	AR2=0.982;DR2=0.986;AF=0.295	GT:DS:GP	0|0:0.234:0.781,0.205,0.015	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.942:0,0.057,0.943	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.539:0,0.46,0.539	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.945:0.001,0.054,0.945	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.263:0.757,0.222,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.16:0.846,0.147,0.007	0|0:0:1,0,0	0|0:0.139:0.866,0.129,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.163:0.844,0.15,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.163:0.844,0.15,0.007	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.205:0.805,0.185,0.01	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.385:0.659,0.296,0.044	1|1:1.761:0.012,0.215,0.773	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.238:0.777,0.208,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.212:0.799,0.189,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.208:0.803,0.185,0.012	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0
+3	19253417	SNP-3.19252176.	A	G	.	PASS	AR2=0.988;DR2=0.991;AF=0.497	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.667:0.002,0.329,0.669	1|1:2:0,0,1	1|1:1.881:0.001,0.118,0.882	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.737:0.018,0.227,0.755	1|1:1.738:0.017,0.229,0.754	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.718:0.021,0.241,0.738	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.79:0.011,0.188,0.801	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.927:0.001,0.071,0.928	0|0:0:1,0,0	1|1:1.926:0.002,0.07,0.928	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.67:0.021,0.288,0.691	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.411:0.035,0.518,0.446	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.836:0.007,0.149,0.844	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19256045	SNP-3.19254804.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.358	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.009:0.003,0.985,0.012	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.985,0.015,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19257814	SNP-3.19256573.	A	G	.	PASS	AR2=0.879;DR2=0.911;AF=0.244	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.474:0.584,0.359,0.058	0|0:0.36:0.692,0.256,0.052	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.733:0.374,0.519,0.107	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.403:0.639,0.318,0.043	1|1:2:0,0,1	0|0:0.629:0.475,0.421,0.104	0|0:0:1,0,0	0|1:0.735:0.398,0.469,0.133	1|1:2:0,0,1	0|0:0.769:0.38,0.47,0.149	0|0:0.382:0.659,0.301,0.04	0|0:0:1,0,0	0|1:0.612:0.459,0.471,0.071	0|0:0:1,0,0	1|0:0.656:0.353,0.637,0.01	1|1:2:0,0,1	0|1:0.972:0.05,0.929,0.022	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.598:0.485,0.433,0.083	0|0:0.593:0.494,0.42,0.086	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.547:0.526,0.4,0.073	0|0:0.542:0.53,0.398,0.072	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.946:0.002,0.049,0.949	0|0:0:1,0,0	1|1:1.918:0.004,0.075,0.921	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.916:0.004,0.076,0.92	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.266:0.754,0.226,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.282:0.745,0.228,0.027	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.306:0.715,0.264,0.021	0|0:0.697:0.422,0.458,0.119	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.39:0.644,0.322,0.034	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.641:0.463,0.433,0.104	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.91:0.004,0.081,0.915	0|0:0:1,0,0	0|0:0.669:0.433,0.464,0.102	0|0:0:1,0,0	0|1:0.748:0.387,0.477,0.136	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.077:0.924,0.074,0.002	0|0:0:1,0,0	0|0:0.242:0.765,0.229,0.006	0|0:0.007:0.993,0.007,0	0|0:0.032:0.969,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.918:0.004,0.075,0.921	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.526:0.543,0.388,0.069	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.384:0.658,0.3,0.042	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.241:0.774,0.21,0.015	1|1:1.937:0.003,0.058,0.94	0|0:0:1,0,0	0|0:0.413:0.626,0.334,0.04	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.606:0.498,0.398,0.104	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.407:0.633,0.326,0.04	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.442:0.615,0.328,0.057	0|0:0.372:0.658,0.312,0.03	1|1:2:0,0,1	0|0:0.167:0.86,0.112,0.028	0|0:0.739:0.361,0.539,0.1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.825:0.336,0.503,0.161	0|0:0:1,0,0	0|0:0.887:0.284,0.545,0.171	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.811:0.38,0.429,0.191	0|0:0.087:0.915,0.083,0.002	0|0:0:1,0,0	1|0:0.774:0.391,0.445,0.164	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.496:0.575,0.354,0.071	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.133:0.878,0.112,0.011	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.462:0.595,0.349,0.056	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.965,0.034,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.909:0.004,0.083,0.913	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19258481	SNP-3.19257240.	C	A	.	PASS	AR2=0.982;DR2=0.989;AF=0.419	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.973:0,0.026,0.974	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.495:0.003,0.499,0.498	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.48:0.586,0.348,0.066	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.807:0.001,0.192,0.807	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.958:0.042,0.957,0	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.97:0.001,0.029,0.97	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	1|1:1.555:0,0.445,0.555	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.444:0.615,0.325,0.059	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.439:0.62,0.321,0.059	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.489:0.069,0.374,0.557	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.535:0.532,0.4,0.068	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.976:0,0.023,0.976	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19264529	SNP-3.19263288.	A	G	.	PASS	AR2=0.967;DR2=0.972;AF=0.239	GT:DS:GP	0|0:0:1,0,0	0|0:0.071:0.93,0.069,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.914:0.001,0.083,0.916	0|0:0:1,0,0	1|1:1.893:0.003,0.102,0.896	0|0:0:1,0,0	0|0:0.101:0.901,0.097,0.002	1|1:1.918:0.003,0.076,0.921	0|0:0.11:0.89,0.11,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.909:0.002,0.087,0.911	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.858:0.005,0.132,0.863	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.291:0.724,0.261,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.308:0.717,0.257,0.026	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.729:0.404,0.462,0.134	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.16:0.847,0.146,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.344:0.688,0.279,0.033	0|0:0.161:0.844,0.151,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.161:0.84,0.16,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.199:0.807,0.188,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.685:0.436,0.443,0.121	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.681:0.439,0.441,0.12	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.077:0.924,0.074,0.002	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.038:0.963,0.037,0.001	0|0:0:1,0,0	1|0:0.765:0.379,0.476,0.145	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.214:0.799,0.188,0.013	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.936,0.063,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.305:0.721,0.254,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.091:0.912,0.086,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19265090	SNP-3.19263849.	C	A	.	PASS	AR2=0.984;DR2=0.987;AF=0.446	GT:DS:GP	0|0:0.17:0.837,0.157,0.006	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.247:0.754,0.244,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.135:0.869,0.126,0.004	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.175:0.831,0.164,0.005	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.162:0.843,0.153,0.005	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.144:0.861,0.134,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.452:0.549,0.451,0	0|0:0:1,0,0	0|0:0.144:0.861,0.133,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.247:0.782,0.189,0.029	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.146:0.86,0.135,0.006	0|0:0:1,0,0	1|1:1.925:0.002,0.07,0.928	0|0:0:1,0,0	1|1:1.926:0.002,0.069,0.928	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.238:0.778,0.206,0.016	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.926:0.002,0.069,0.928	0|0:0:1,0,0	0|0:0.135:0.871,0.124,0.005	0|0:0:1,0,0	0|0:0.098:0.904,0.093,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.957:0.001,0.04,0.958	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.926:0.002,0.069,0.928	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.157:0.85,0.144,0.007	0|0:0.12:0.883,0.113,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.926:0.002,0.069,0.928	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.171:0.837,0.154,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.926:0.002,0.069,0.928	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.925:0.002,0.07,0.928	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19266201	SNP-3.19264960.	A	G	.	PASS	AR2=0.952;DR2=0.955;AF=0.476	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1.211:0.156,0.478,0.367	0|0:1.082:0.213,0.492,0.295	1|1:1.113:0.194,0.5,0.307	1|0:1:0,1,0	0|1:1.098:0.205,0.492,0.303	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1.121:0.186,0.507,0.307	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.916:0,0.083,0.917	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.614:0.035,0.316,0.649	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.712:0.021,0.247,0.733	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.865:0.003,0.128,0.869	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.611:0.063,0.263,0.674	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.175:0.169,0.486,0.344	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.128:0.192,0.488,0.32	1|1:2:0,0,1	0|1:0.971:0.263,0.502,0.234	1|1:1.114:0.197,0.492,0.311	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.176:0.833,0.158,0.009	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.173:0.836,0.156,0.009	1|0:1:0,1,0	1|0:1.253:0.144,0.46,0.396	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.82:0.011,0.158,0.831	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.079:0.215,0.492,0.293	0|0:0:1,0,0	1|1:1.122:0.202,0.475,0.323	0|1:1.154:0.184,0.479,0.338	1|0:1:0,1,0	1|1:1.974:0,0.025,0.974	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.154:0.184,0.479,0.338	1|0:1:0,1,0	0|1:1.079:0.214,0.492,0.293	1|1:2:0,0,1	0|0:0.156:0.853,0.139,0.008	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.932:0.002,0.065,0.933	1|1:2:0,0,1	1|1:1.962:0,0.037,0.962	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.91:0.002,0.086,0.912	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	19266413	SNP-3.19265172.	C	A	.	PASS	AR2=0.98;DR2=0.985;AF=0.343	GT:DS:GP	0|0:0:1,0,0	1|1:1.897:0.002,0.099,0.899	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.425:0.621,0.332,0.046	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.84:0.007,0.147,0.846	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.845:0.007,0.14,0.852	1|1:1.804:0.009,0.177,0.813	1|1:1.913:0.003,0.081,0.916	0|0:0.41:0.633,0.324,0.043	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.332:0.06,0.549,0.391	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.971:0,0.029,0.971	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.87:0.007,0.115,0.877	1|1:1.779:0.012,0.198,0.791	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.425:0.621,0.332,0.046	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.86:0.007,0.127,0.866	0|0:0:1,0,0	0|0:0.422:0.624,0.331,0.046	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.878:0.004,0.114,0.882	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.958:0,0.041,0.958	0|0:0:1,0,0	0|0:0.425:0.621,0.332,0.046	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19266618	SNP-3.19265377.	C	A	.	PASS	AR2=0.976;DR2=0.982;AF=0.343	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.731:0.404,0.461,0.135	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1.378:0.058,0.506,0.436	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.51:0.501,0.489,0.01	1|1:2:0,0,1	1|1:1.828:0.003,0.166,0.831	1|1:2:0,0,1	0|1:0.642:0.47,0.419,0.111	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.971:0,0.028,0.972	1|0:1.01:0.245,0.5,0.255	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.983:0,0.016,0.983	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.729:0.405,0.461,0.134	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.731:0.404,0.461,0.135	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.731:0.404,0.461,0.135	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19271202	SNP-3.19269961.	C	A	.	PASS	AR2=0.987;DR2=0.991;AF=0.372	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.936,0.062,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.082:0.92,0.078,0.002	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.497:0.565,0.373,0.062	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.941,0.058,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.886:0.002,0.111,0.887	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.856:0.008,0.129,0.864	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.497:0.565,0.373,0.062	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.17:0.84,0.151,0.009	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.497:0.565,0.373,0.062	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.71:0.039,0.211,0.749	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19273141	SNP-3.19271900.	C	A	.	PASS	AR2=0.969;DR2=0.976;AF=0.336	GT:DS:GP	0|0:0.058:0.944,0.055,0.002	1|1:1.781:0.012,0.194,0.794	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.96,0.039,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.772:0.014,0.2,0.786	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.699:0.019,0.262,0.719	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.748:0.014,0.224,0.762	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.05,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.935,0.064,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.686:0.022,0.271,0.708	1|1:1.967:0,0.033,0.967	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.581:0.501,0.416,0.082	1|1:1.585:0.053,0.31,0.638	1|1:2:0,0,1	1|1:1.814:0.002,0.182,0.816	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.732:0.012,0.245,0.744	0|0:0.132:0.872,0.124,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.81:0.009,0.172,0.819	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.635:0.033,0.298,0.669	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.02:0.002,0.975,0.023	0|0:0.213:0.825,0.136,0.039	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.725:0.025,0.226,0.75	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.872:0.005,0.119,0.877	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.031:0.97,0.03,0	1|1:1.777:0.011,0.2,0.788	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.188:0.823,0.166,0.011	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.803:0.01,0.177,0.813	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.809:0.008,0.174,0.818	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.123:0.882,0.113,0.005	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.13:0.872,0.126,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.272:0.754,0.22,0.026	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.927:0.005,0.064,0.931	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	1|1:1.662:0.02,0.298,0.682	0|0:0:1,0,0
+3	19281719	SNP-3.19280478.	C	A	.	PASS	AR2=0.974;DR2=0.977;AF=0.401	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1.19:0.171,0.468,0.361	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.246:0.145,0.464,0.391	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.069:0.213,0.506,0.281	1|1:1.135:0.186,0.492,0.322	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.842:0.006,0.145,0.848	0|1:1.046:0.111,0.732,0.157	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.919:0.003,0.075,0.922	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.783:0.008,0.201,0.791	1|1:1.52:0.04,0.4,0.56	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.13:0.872,0.125,0.003	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.699:0.016,0.269,0.715	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1.145:0.054,0.746,0.2	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.964:0,0.036,0.964	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.049:0.226,0.498,0.275	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.966:0,0.033,0.966	0|0:0:1,0,0	1|0:1.119:0.195,0.492,0.314	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.104:0.203,0.491,0.307	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	19282070	SNP-3.19280829.	A	G	.	PASS	AR2=0.964;DR2=0.97;AF=0.324	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.474:0.534,0.459,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.174:0.833,0.159,0.008	0|0:0:1,0,0	0|0:0.165:0.842,0.151,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:0.866:0.317,0.5,0.183	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.793:0.372,0.464,0.165	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.231:0.776,0.217,0.007	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.106:0.898,0.098,0.004	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.303:0.713,0.27,0.017	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.426:0.03,0.514,0.456	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.213:0.79,0.208,0.002	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.401:0.634,0.331,0.035	1|1:2:0,0,1	0|1:0.87:0.315,0.5,0.185	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.189:0.82,0.171,0.009	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0.202:0.808,0.182,0.01	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.977:0.258,0.506,0.236	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.923:0.284,0.51,0.206	1|1:2:0,0,1	0|0:0.222:0.788,0.202,0.01	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.946:0.28,0.493,0.226	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.97:0.273,0.483,0.243	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19283750	SNP-3.19282509.	C	A	.	PASS	AR2=0.975;DR2=0.978;AF=0.357	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.315:0.688,0.309,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.861:0.322,0.495,0.183	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.996:0.253,0.498,0.249	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.977:0,0.023,0.977	0|1:1.426:0.037,0.499,0.464	0|1:0.927:0.252,0.568,0.179	1|1:2:0,0,1	0|1:1.328:0.079,0.515,0.406	1|1:1.362:0.064,0.51,0.426	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.618:0.021,0.341,0.638	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.991:0.239,0.53,0.23	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.949:0.001,0.049,0.95	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.96:0.265,0.511,0.225	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.951:0.001,0.047,0.952	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.964:0.273,0.491,0.237	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	19284115	SNP-3.19282874.	C	A	.	PASS	AR2=0.968;DR2=0.974;AF=0.441	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.015:0.985,0.015,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.114:0.887,0.113,0.001	0|0:0.088:0.915,0.082,0.003	0|0:0.083:0.92,0.076,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.026:0.975,0.024,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.139:0.862,0.137,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.026:0.974,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.075:0.927,0.071,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.951,0.048,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.967,0.032,0.001	0|0:0:1,0,0	0|0:0.039:0.961,0.039,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.3:0.732,0.236,0.032	0|0:0.161:0.845,0.148,0.007	0|0:0.057:0.944,0.056,0.001	0|0:0:1,0,0	0|0:0.152:0.856,0.136,0.008	0|0:0:1,0,0	0|0:0.148:0.86,0.133,0.007	1|1:2:0,0,1	0|0:0.039:0.961,0.039,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.093:0.911,0.085,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.283:0.746,0.225,0.029	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.531:0.005,0.459,0.536	0|0:0:1,0,0	1|1:1.962:0.001,0.037,0.963	0|1:1.298:0.034,0.634,0.332	1|1:1.64:0.006,0.348,0.646	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.531:0.004,0.462,0.535	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.423:0.615,0.346,0.039	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.934:0.293,0.479,0.228	1|1:2:0,0,1	0|0:0.059:0.942,0.057,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.466:0.008,0.518,0.474	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.121:0.886,0.107,0.007	1|0:0.852:0.328,0.493,0.18	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.11:0.899,0.093,0.008	0|0:0.128:0.876,0.121,0.004	0|0:0.03:0.97,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.024:0.976,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:0.973:0.261,0.506,0.234	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.14:0.865,0.131,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.834:0.338,0.49,0.172	0|0:0:1,0,0	0|0:0.069:0.933,0.065,0.002	0|0:0.187:0.82,0.173,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0.021:0.979,0.021,0	0|0:0.024:0.976,0.023,0	0|0:0.023:0.977,0.022,0	0|0:0:1,0,0	0|0:0.026:0.974,0.025,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.137:0.864,0.135,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19284183	SNP-3.19282942.	A	G	.	PASS	AR2=0.937;DR2=0.954;AF=0.517	GT:DS:GP	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.889:0.003,0.105,0.892	0|0:0:1,0,0	0|1:1.374:0.107,0.411,0.481	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.716:0.021,0.241,0.738	1|1:1.66:0.032,0.276,0.692	1|1:2:0,0,1	1|1:1.784:0.016,0.185,0.8	1|1:1.665:0.026,0.284,0.691	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.808:0.013,0.166,0.821	1|1:1.826:0.01,0.154,0.836	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.647:0.03,0.292,0.678	1|1:1.852:0.01,0.128,0.862	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1.465:0.072,0.39,0.538	1|1:2:0,0,1	1|1:1.378:0.022,0.577,0.4	1|1:2:0,0,1	0|1:1.071:0.158,0.612,0.229	1|1:1.797:0.017,0.168,0.815	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.535:0.046,0.374,0.58	1|1:2:0,0,1	1|1:1.754:0.015,0.216,0.769	1|1:1.736:0.018,0.228,0.754	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.668:0.026,0.281,0.693	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.867:0.004,0.124,0.872	1|1:1.961:0,0.038,0.961	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.592:0.034,0.34,0.626	0|1:1.478:0.048,0.425,0.526	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.914:0.001,0.083,0.916	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.358:0.097,0.449,0.455	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.797:0.01,0.184,0.807	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.669:0.027,0.278,0.695	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.388:0.06,0.492,0.448	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.896:0.002,0.099,0.899	0|0:0.002:0.998,0.002,0	1|1:1.94:0.001,0.059,0.94	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1.411:0.074,0.441,0.485	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.651:0.031,0.288,0.682	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.766:0.014,0.205,0.78	1|1:1.836:0.009,0.146,0.845	1|1:1.587:0.047,0.32,0.633	1|1:1.822:0.013,0.151,0.835	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.509:0.066,0.359,0.575	1|1:2:0,0,1	1|1:1.641:0.024,0.31,0.666	0|0:0:1,0,0	1|1:1.814:0.009,0.167,0.823	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.699:0.024,0.254,0.723	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.543:0.027,0.402,0.571	1|1:1.848:0.007,0.139,0.855	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.836:0.01,0.144,0.846	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.918:0.001,0.08,0.919	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.826:0.01,0.154,0.836	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.756:0.018,0.209,0.773	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19284232	SNP-3.19282991.	C	A	.	PASS	AR2=0.993;DR2=0.994;AF=0.421	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.968,0.032,0	1|0:0.704:0.325,0.647,0.028	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.047:0.954,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.956:0.001,0.043,0.956	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.95:0.001,0.048,0.951	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.958:0.001,0.04,0.959	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.349:0.665,0.322,0.014	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.931:0.002,0.066,0.932	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.935:0.001,0.063,0.936	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.949:0.001,0.049,0.95	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.095:0.906,0.093,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.175:0.833,0.159,0.008	0|0:0:1,0,0	0|0:0.085:0.918,0.08,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.951:0.001,0.047,0.952	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.128:0.872,0.128,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19287495	SNP-3.19286254.	C	A	.	PASS	AR2=0.978;DR2=0.983;AF=0.419	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.109:0.894,0.103,0.003	0|0:0.196:0.813,0.177,0.009	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.22:0.79,0.2,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.104:0.899,0.098,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.217:0.79,0.202,0.007	0|0:0.089:0.914,0.084,0.002	0|0:0.069:0.932,0.066,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.313:0.134,0.418,0.447	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.758:0.015,0.211,0.774	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.085:0.916,0.083,0.001	0|0:0:1,0,0	0|0:0.058:0.943,0.056,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.086:0.206,0.502,0.292	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.035:0.194,0.577,0.229	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.129:0.875,0.121,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.096:0.907,0.091,0.003	0|0:0:1,0,0	0|0:0.103:0.9,0.097,0.003	0|0:0.102:0.901,0.096,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.074:0.928,0.07,0.002	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.111:0.893,0.104,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.111:0.892,0.104,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.347:0.113,0.427,0.46	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19287814	SNP-3.19286573.	C	A	.	PASS	AR2=0.973;DR2=0.977;AF=0.477	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.226:0.787,0.2,0.013	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.223:0.79,0.198,0.013	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.182:0.828,0.162,0.01	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.335:0.682,0.3,0.018	0|0:0:1,0,0	1|0:0.607:0.445,0.503,0.052	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.194:0.815,0.175,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.872:0.319,0.49,0.191	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.188:0.82,0.172,0.008	0|0:0.218:0.793,0.196,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.772:0.015,0.198,0.787	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.342:0.681,0.296,0.023	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.028,0.972	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:0.893:0.307,0.493,0.2	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.257:0.761,0.221,0.018	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.196:0.815,0.174,0.011	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.777:0,0.223,0.777	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.177:0.171,0.481,0.348	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.158:0.85,0.142,0.008	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.202:0.135,0.527,0.338	0|0:0.346:0.673,0.308,0.019	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19288045	SNP-3.19286804.	C	A	.	PASS	AR2=0.98;DR2=0.986;AF=0.437	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.908:0.003,0.086,0.911	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.912:0.002,0.083,0.915	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.676:0.357,0.611,0.033	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.519:0.061,0.358,0.58	0|0:0:1,0,0	0|1:1.527:0.06,0.352,0.588	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.493:0.064,0.379,0.557	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.566:0.024,0.386,0.59	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.879:0.004,0.114,0.883	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.827:0.008,0.157,0.835	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.926:0.002,0.071,0.927	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.866:0.005,0.124,0.871	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.306:0.037,0.621,0.342	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.854:0.006,0.134,0.86	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.52:0.062,0.356,0.582	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19288594	SNP-3.19287353.	C	A	.	PASS	AR2=0.982;DR2=0.986;AF=0.339	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.97:0.001,0.028,0.971	1|1:1.917:0.002,0.078,0.919	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.83:0.011,0.147,0.841	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.915:0.003,0.079,0.918	1|1:2:0,0,1	1|1:1.961:0,0.039,0.961	1|1:1.918:0.002,0.077,0.92	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.937:0.001,0.06,0.939	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.903:0.003,0.09,0.907	1|1:2:0,0,1	1|1:1.925:0.001,0.074,0.925	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.903:0.002,0.092,0.905	0|0:0.008:0.992,0.008,0	1|1:1.968:0,0.032,0.968	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.928:0.001,0.07,0.929	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.919:0.002,0.077,0.921	1|1:2:0,0,1	1|1:1.933:0.002,0.064,0.934	1|1:2:0,0,1	0|1:1.322:0.02,0.639,0.342	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.94:0,0.059,0.941	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.953:0.001,0.045,0.954	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.177:0.355,0.114,0.532	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.86:0.005,0.129,0.866	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.879:0.003,0.115,0.882	0|0:0:1,0,0	1|1:1.881:0.004,0.112,0.884	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.946:0,0.053,0.946	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.895:0.003,0.099,0.898	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.9:0.003,0.094,0.903	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.941:0.001,0.057,0.942	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.858:0.006,0.131,0.863	1|1:1.96:0.001,0.038,0.961	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.96:0.001,0.038,0.961	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.956:0,0.043,0.956	0|0:0:1,0,0
+3	19289149	SNP-3.19287908.	C	A	.	PASS	AR2=0.981;DR2=0.987;AF=0.47	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.055:0.945,0.055,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.443:0.611,0.335,0.054	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.361:0.671,0.296,0.032	0|0:0:1,0,0	0|0:0.377:0.659,0.305,0.036	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.886:0.002,0.11,0.888	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.976:0,0.024,0.976	0|0:0:1,0,0	0|0:0.278:0.74,0.242,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.235:0.777,0.211,0.012	0|0:0:1,0,0	0|0:0.365:0.669,0.298,0.034	1|0:0.531:0.535,0.399,0.066	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.362:0.671,0.296,0.033	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:0.483:0.582,0.352,0.065	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19289418	SNP-3.19288177.	C	A	.	PASS	AR2=0.964;DR2=0.968;AF=0.418	GT:DS:GP	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.02:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.931:0.142,0.785,0.073	0|0:0.017:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.959,0.041,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.275:0.736,0.253,0.011	0|0:0:1,0,0	0|0:0.151:0.85,0.148,0.002	0|0:0:1,0,0	0|0:0.146:0.861,0.133,0.007	0|0:0.189:0.821,0.169,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.165:0.842,0.15,0.008	0|0:0:1,0,0	0|0:0.18:0.828,0.163,0.008	0|0:0.235:0.779,0.207,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.201:0.809,0.18,0.01	1|0:0.912:0.298,0.493,0.21	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.166:0.841,0.152,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.796:0.356,0.492,0.152	0|0:0:1,0,0	0|0:0.186:0.822,0.17,0.008	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.166:0.841,0.152,0.007	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.165:0.842,0.151,0.007	0|0:0.194:0.816,0.174,0.01	0|0:0.175:0.833,0.159,0.008	0|0:0.194:0.813,0.18,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0,0.021,0.979	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.065:0.937,0.061,0.002	1|1:2:0,0,1	0|0:0.219:0.797,0.188,0.015	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.908:0.299,0.494,0.207	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.01:0.99,0.01,0	0|0:0.441:0.563,0.432,0.004	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.01:0.99,0.01,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.322:0,0.678,0.322	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.942:0.001,0.056,0.943	0|0:0.183:0.826,0.165,0.009	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.686:0.027,0.26,0.713	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.217:0.795,0.192,0.013	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.096:0.908,0.088,0.004	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.022:0.978,0.021,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.929,0.07,0.002	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.026,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.141:0.864,0.13,0.006	0|0:0.187:0.822,0.169,0.009	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.9:0.304,0.492,0.204	0|0:0:1,0,0	0|0:0.064:0.937,0.063,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0.161:0.845,0.148,0.007	0|0:0.165:0.842,0.152,0.007	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.214:0.798,0.19,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.168:0.839,0.154,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	1|1:1.978:0,0.022,0.978	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.091:0.91,0.089,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0
+3	19289684	SNP-3.19288443.	A	G	.	PASS	AR2=0.899;DR2=0.928;AF=0.422	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.3:0.122,0.457,0.422	1|1:1.745:0.017,0.221,0.762	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.339:0.112,0.437,0.451	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.818:0.014,0.154,0.832	1|1:2:0,0,1	1|1:1.466:0.072,0.39,0.538	1|1:2:0,0,1	1|1:1.64:0.029,0.302,0.669	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.208:0.212,0.368,0.42	0|1:1.452:0.078,0.392,0.53	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.352:0.109,0.431,0.461	0|0:0:1,0,0	1|1:1.425:0.092,0.39,0.517	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.525:0.06,0.356,0.584	1|1:2:0,0,1	1|1:1.237:0.139,0.486,0.375	1|1:1.531:0.065,0.339,0.596	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.814:0.013,0.16,0.827	1|1:1.477:0.06,0.404,0.536	0|0:0:1,0,0	1|1:1.744:0.02,0.216,0.764	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|0:1.343:0.111,0.434,0.454	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.583:0.037,0.343,0.62	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.757:0.011,0.22,0.769	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.625:0.044,0.286,0.669	1|1:1.908:0.005,0.082,0.913	1|1:2:0,0,1	0|1:1.452:0.07,0.407,0.523	0|0:0:1,0,0	1|1:1.86:0.009,0.122,0.869	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.934:0.001,0.064,0.935	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.382:0.087,0.445,0.468	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.407:0.091,0.41,0.498	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.771:0.005,0.22,0.776	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:1.608:0.046,0.3,0.654	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.467:0.07,0.394,0.537	1|1:1.842:0.008,0.143,0.849	0|0:0:1,0,0	1|1:1.324:0.115,0.445,0.439	1|1:1.771:0.016,0.198,0.787	0|0:0:1,0,0	1|1:1.408:0.091,0.41,0.499	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.711:0.023,0.243,0.734	1|1:1.873:0.005,0.116,0.878	0|0:0:1,0,0	1|1:1.354:0.117,0.412,0.471	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.292:0.122,0.464,0.414	1|1:1.767:0.004,0.225,0.771	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.507:0.079,0.335,0.586	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.417:0.046,0.491,0.463	1|1:1.692:0.021,0.267,0.712	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.743:0.02,0.217,0.763	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.836:0.012,0.14,0.848	1|1:1.906:0.003,0.089,0.909	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.868:0.007,0.117,0.875	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.154:0.212,0.422,0.366	0|0:0:1,0,0	1|0:1.341:0.112,0.435,0.453	1|1:2:0,0,1	1|1:1.352:0.109,0.431,0.46	1|1:1.986:0,0.014,0.986	1|0:1.198:0.165,0.472,0.363	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	0|0:0:1,0,0	1|0:1.289:0.128,0.455,0.417	0|0:0:1,0,0	1|1:1.352:0.109,0.431,0.461	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996
+3	19292046	SNP-3.19290805.	C	A	.	PASS	AR2=0.973;DR2=0.976;AF=0.384	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.987:0,0.012,0.987	0|0:0:1,0,0	0|0:0.16:0.848,0.145,0.007	0|0:0.057:0.944,0.056,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	1|0:0.945:0.28,0.494,0.225	0|0:0:1,0,0	0|0:0.277:0.744,0.235,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.164:0.844,0.148,0.008	0|0:0:1,0,0	0|1:0.827:0.335,0.503,0.162	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.727:0.019,0.235,0.746	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.088:0.914,0.085,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.188:0.15,0.511,0.338	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.668:0.003,0.326,0.671	0|0:0:1,0,0	1|1:1.982:0,0.018,0.982	0|1:1:0,1,0	1|1:1.757:0.002,0.238,0.759	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.143:0.861,0.135,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:0.937:0.283,0.496,0.22	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.753:0.001,0.246,0.753	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.982:0,0.017,0.982	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.869:0,0.13,0.87	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.929:0.289,0.493,0.218	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.017:0.983,0.017,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.067:0.936,0.062,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.175:0.833,0.158,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.342:0.712,0.235,0.054	0|0:0.131:0.875,0.118,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.141:0.865,0.128,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.271:0.749,0.231,0.02	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19294696	SNP-3.19293206.	C	A	.	PASS	AR2=0.967;DR2=0.968;AF=0.434	GT:DS:GP	0|0:0.02:0.98,0.019,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.024:0.976,0.023,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	0|0:0:1,0,0	0|0:0.074:0.928,0.07,0.002	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.948:0.001,0.05,0.949	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.954,0.045,0.001	1|0:1.008:0.263,0.465,0.271	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.105:0.9,0.096,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.097:0.903,0.097,0	0|0:0.003:0.997,0.003,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0.954:0.272,0.502,0.226	0|0:0.001:0.999,0.001,0	1|0:0.963:0.267,0.504,0.23	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.918:0.292,0.499,0.209	1|0:0.934:0.283,0.5,0.217	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0.916:0.294,0.495,0.21	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.938:0.001,0.061,0.939	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.935:0.283,0.499,0.218	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.851:0.002,0.144,0.854	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|1:0.869:0.323,0.486,0.191	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.927:0.289,0.495,0.216	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:1.947:0.001,0.052,0.947	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.979:0.255,0.51,0.235	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.954:0.001,0.045,0.954	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.862:0.326,0.485,0.189	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.925:0.289,0.498,0.214	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0.009:0.991,0.009,0	0|0:0.078:0.925,0.073,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.92:0.291,0.497,0.212	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.955:0.271,0.503,0.226	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19295568	SNP-3.19294078.	C	A	.	PASS	AR2=0.932;DR2=0.951;AF=0.345	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.293:0.729,0.25,0.021	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.939:0.003,0.056,0.941	1|1:2:0,0,1	0|1:0.97:0.275,0.481,0.244	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.29:0.726,0.259,0.015	1|0:1.011:0.301,0.387,0.312	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.247:0.766,0.221,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.313:0.711,0.264,0.025	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.404:0.637,0.322,0.041	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.921,0.079,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.382:0.664,0.29,0.046	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.222:0.787,0.203,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.081:0.925,0.07,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.466:0.571,0.393,0.037	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.751:0.019,0.21,0.77	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.507:0.06,0.372,0.567	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.793:0.011,0.185,0.804	1|1:1.251:0.137,0.474,0.389	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.178:0.83,0.162,0.008	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.748:0.385,0.483,0.133	1|1:2:0,0,1	0|0:0.254:0.767,0.212,0.021	0|0:1.046:0.367,0.22,0.413	1|1:1.434:0.079,0.408,0.513	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.795:0.01,0.185,0.805	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.811:0.007,0.175,0.818	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.247:0.787,0.179,0.034	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.02:0.98,0.02,0	0|1:1.375:0.105,0.415,0.48	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.55:0.49,0.469,0.04	0|0:0:1,0,0	0|0:0.223:0.792,0.192,0.016	0|0:0.213:0.804,0.179,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.304:0.72,0.257,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.699:0.436,0.428,0.136	0|0:0.118:0.885,0.113,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.123:0.881,0.115,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.303:0.718,0.26,0.022	0|0:0:1,0,0	0|0:0.085:0.92,0.075,0.005	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.236:0.782,0.199,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.308:0.711,0.271,0.019	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.31:0.714,0.262,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.072:0.929,0.069,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.849:0.004,0.143,0.853	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.98,0.02,0
+3	19296252	SNP-3.19294762.	A	G	.	PASS	AR2=0.993;DR2=0.995;AF=0.258	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.69:0.31,0.69,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.69:0.31,0.69,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.69:0.31,0.69,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.69:0.31,0.69,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19296949	SNP-3.19295459.	A	G	.	PASS	AR2=1;DR2=1;AF=0.284	GT:DS:GP	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19297394	SNP-3.19295904.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.274	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.003:0.002,0.992,0.006	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.908:0.003,0.086,0.911	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.998:0.002,0.998,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.007:0.001,0.991,0.008	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19301555	SNP-3.19300065.	C	A	.	PASS	AR2=0.94;DR2=0.956;AF=0.453	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.133:0.874,0.119,0.007	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.929:0.002,0.067,0.931	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.245:0.151,0.453,0.396	1|1:1.488:0.076,0.36,0.564	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.575:0.058,0.309,0.633	1|1:1.422:0.082,0.413,0.505	0|0:0.209:0.806,0.18,0.014	0|0:0:1,0,0	1|0:0.855:0.283,0.579,0.138	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.567:0.515,0.403,0.082	0|0:0:1,0,0	0|0:0.091:0.911,0.088,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.118:0.883,0.115,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.034:0.967,0.032,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.621:0.474,0.431,0.095	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.266:0.749,0.236,0.015	0|0:0.094:0.91,0.087,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.93:0.001,0.067,0.931	1|1:2:0,0,1	1|1:1.935:0.001,0.063,0.936	1|1:1.625:0.055,0.264,0.681	1|1:2:0,0,1	1|1:1.933:0.001,0.064,0.934	1|1:1.944:0.001,0.054,0.945	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.912:0.001,0.085,0.914	1|1:1.925:0.001,0.072,0.927	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.136:0.874,0.117,0.01	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.953:0.001,0.045,0.954	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.954:0,0.045,0.955	1|1:1.839:0.004,0.152,0.844	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0,0.031,0.969	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.021:0.979,0.02,0	0|0:0:1,0,0	1|0:0.653:0.452,0.442,0.105	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.637:0.461,0.44,0.098	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.682:0.033,0.253,0.715	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.485:0.075,0.365,0.56	1|1:2:0,0,1	1|1:1.106:0.216,0.461,0.323	1|1:1.674:0.034,0.258,0.708	0|0:0:1,0,0	0|0:0.776:0.4,0.424,0.176	0|0:0.452:0.603,0.343,0.055	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.734:0.392,0.483,0.125	1|1:2:0,0,1	0|0:0.107:0.896,0.1,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.881:0.002,0.114,0.884	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.956:0,0.044,0.956	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.944:0.002,0.051,0.946	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.705:0.029,0.237,0.734	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.414:0.092,0.401,0.507	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.46:0.078,0.383,0.538	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.115:0.892,0.101,0.007	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.018,0.981	1|1:1.94:0.002,0.055,0.942	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.948:0.001,0.05,0.949	0|0:0:1,0,0	1|1:1.676:0.032,0.259,0.709	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19302439	SNP-3.19300949.	C	A	.	PASS	AR2=0.975;DR2=0.978;AF=0.346	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.014:0.986,0.014,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.959:0.001,0.039,0.96	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.021:0.979,0.02,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.71:0.023,0.245,0.733	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.219:0.797,0.187,0.016	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.13:0.876,0.118,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.089:0.915,0.081,0.004	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.892:0.003,0.101,0.896	1|1:1.9:0.003,0.095,0.902	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	1|1:1.876:0.004,0.116,0.88	1|1:2:0,0,1	1|1:1.85:0.006,0.138,0.856	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.879:0.004,0.112,0.884	1|1:1.746:0.018,0.218,0.764	1|1:1.844:0.01,0.136,0.854	1|1:1.923:0.002,0.073,0.925	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.986:0.315,0.384,0.301	1|1:2:0,0,1	1|1:1.846:0.007,0.14,0.853	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.887:0.004,0.105,0.891	1|1:2:0,0,1	0|0:0.018:0.983,0.017,0	0|0:0:1,0,0	1|1:1.867:0.004,0.124,0.871	1|1:1.929:0.002,0.067,0.931	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.95:0.002,0.047,0.952	0|1:1.204:0.013,0.769,0.217	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.947:0.001,0.052,0.948	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.05:0.95,0.05,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.772:0.008,0.213,0.78	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.87:0.004,0.122,0.874	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.102:0.902,0.094,0.004	0|0:0.196:0.823,0.158,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.088:0.912,0.087,0	1|1:1.973:0.001,0.025,0.974	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.49:0.184,0.143,0.673	1|1:2:0,0,1	1|1:1.894:0.005,0.095,0.899	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.876:0.006,0.112,0.882	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.067:0.936,0.061,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:1.924:0.002,0.071,0.926	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19309647	SNP-3.19308157.	C	A	.	PASS	AR2=0.965;DR2=0.971;AF=0.423	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.344:0.7,0.257,0.043	0|0:0.196:0.821,0.162,0.017	1|1:1.986:0,0.014,0.986	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.113:0.892,0.103,0.005	0|0:0:1,0,0	0|0:0.045:0.956,0.044,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.199:0.823,0.155,0.022	0|0:0:1,0,0	0|0:0.179:0.831,0.159,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.107:0.897,0.099,0.004	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:0.819:0.258,0.664,0.078	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.128:0.882,0.109,0.009	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.13:0.874,0.121,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.164:0.844,0.149,0.008	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0.189:0.823,0.166,0.012	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.963:0,0.037,0.963	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.972:0,0.027,0.972	1|1:2:0,0,1	0|1:0.865:0.241,0.652,0.107	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.575:0.592,0.241,0.167	0|1:0.83:0.25,0.669,0.08	0|0:0.183:0.829,0.159,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.319:0.701,0.279,0.02	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0.075:0.926,0.072,0.001	1|0:1:0,1,0	0|0:0.358:0.669,0.305,0.026	0|0:0.425:0.646,0.282,0.072	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.115:0.89,0.106,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.863:0.244,0.648,0.108	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.102:0.904,0.089,0.007	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.141:0.864,0.132,0.005	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.294:0.734,0.239,0.027	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.112:0.892,0.105,0.004	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.826:0.248,0.678,0.074	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.99,0.01,0	0|0:0.109:0.892,0.107,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.847:0.254,0.645,0.101	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19315968	SNP-3.19314478.	C	A	.	PASS	AR2=0.988;DR2=0.989;AF=0.308	GT:DS:GP	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.959:0.001,0.04,0.959	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.834:0.329,0.509,0.163	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.818:0.011,0.159,0.83	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.95:0.001,0.048,0.951	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.858:0.005,0.132,0.863	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.877:0.005,0.114,0.882	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.634:0.034,0.299,0.667	1|1:1.96:0.001,0.039,0.961	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.923:0.001,0.075,0.924	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0,0.031,0.969	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.837:0.019,0.125,0.856	0|1:1:0,1,0	0|0:0.06:0.945,0.051,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.86:0.006,0.128,0.866	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.822:0.018,0.143,0.839	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.913:0.002,0.083,0.915	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.893:0.006,0.095,0.899	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19316683	SNP-3.19315193.	C	A	.	PASS	AR2=0.969;DR2=0.978;AF=0.263	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.593:0.038,0.331,0.631	0|0:0.062:0.94,0.058,0.002	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.102:0.902,0.095,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0.057:0.943,0.056,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.593:0.053,0.301,0.646	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.714:0.025,0.236,0.739	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.033:0.136,0.694,0.169	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.41:0.14,0.31,0.55	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.397:0.099,0.404,0.497	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.682:0.025,0.269,0.706	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	1|0:1.207:0.16,0.474,0.367	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.585:0.453,0.509,0.038	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.393:0.04,0.526,0.433	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.72:0.023,0.235,0.743	1|1:1.883:0.007,0.103,0.89	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.872:0.006,0.117,0.877	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19317266	SNP-3.19315776.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.276	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.97:0.045,0.939,0.015	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.967:0.043,0.947,0.01	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.972:0.043,0.942,0.015	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19317544	SNP-3.19316054.	C	A	.	PASS	AR2=0.989;DR2=0.993;AF=0.38	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.56:0.507,0.426,0.067	1|0:1:0,1,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.239:0.763,0.236,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.216:0.79,0.203,0.006	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.761:0.389,0.461,0.15	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.605:0.476,0.444,0.081	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19318627	SNP-3.19317137.	C	A	.	PASS	AR2=0.913;DR2=0.933;AF=0.264	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.739:0.427,0.406,0.166	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.531:0.546,0.377,0.077	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.847:0.306,0.542,0.153	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.173:0.223,0.381,0.396	1|1:1.501:0.072,0.354,0.574	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.568:0.051,0.329,0.62	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.011:0.28,0.428,0.292	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.801:0.013,0.173,0.814	1|1:2:0,0,1	1|1:1.617:0.025,0.332,0.642	0|1:1.08:0.276,0.369,0.355	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.82:0.008,0.164,0.828	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.222:0.073,0.632,0.295	1|1:1.872:0.004,0.12,0.876	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.192:0.151,0.506,0.343	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.052:0.95,0.049,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.141:0.875,0.11,0.016	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.567:0.03,0.373,0.597	0|1:0.804:0.324,0.548,0.128	1|1:1.63:0.046,0.278,0.676	1|1:2:0,0,1	1|1:1.551:0.076,0.297,0.627	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:1.093:0.237,0.433,0.33	1|1:1.709:0.036,0.219,0.745	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.103:0.111,0.675,0.214	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.693:0.022,0.263,0.715	1|1:2:0,0,1	1|0:0.925:0.247,0.581,0.172	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.386:0.643,0.327,0.03	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.797:0.015,0.173,0.812	1|1:2:0,0,1	1|1:1.764:0.022,0.192,0.786	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.666:0.412,0.509,0.078	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.511:0.074,0.342,0.585	1|1:2:0,0,1	1|1:1.511:0.073,0.342,0.585	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.742:0.025,0.209,0.766	1|1:1.865:0.007,0.121,0.872	1|1:1.44:0.091,0.379,0.531	1|1:2:0,0,1	0|1:1.294:0.127,0.453,0.42	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.225:0.16,0.454,0.386	0|0:0:1,0,0
+3	19318755	SNP-3.19317265.	A	G	.	PASS	AR2=0.928;DR2=0.944;AF=0.242	GT:DS:GP	0|0:0:1,0,0	0|0:0.058:0.943,0.056,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.895:0.313,0.479,0.208	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.765:0.468,0.299,0.233	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.714:0.022,0.242,0.736	1|1:1.598:0.034,0.333,0.632	1|0:1.195:0.054,0.698,0.248	1|1:2:0,0,1	0|0:0.481:0.613,0.294,0.094	1|1:0.95:0.282,0.486,0.232	1|1:2:0,0,1	0|0:0.052:0.949,0.049,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.167:0.263,0.308,0.43	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.873:0.318,0.491,0.191	0|0:0:1,0,0	1|0:0.857:0.328,0.488,0.185	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.927:0.289,0.495,0.216	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.564:0.503,0.431,0.066	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.97,0.029,0.001	0|0:0.173:0.834,0.158,0.007	0|0:0:1,0,0	0|1:0.886:0.311,0.493,0.197	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.964,0.034,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.024:0.976,0.023,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.295:0.726,0.254,0.02	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.867:0.322,0.49,0.189	0|0:0.093:0.908,0.092,0	0|0:0:1,0,0	0|0:0.191:0.818,0.172,0.009	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.526:0.059,0.356,0.585	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.872:0.319,0.49,0.191	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.125:0.881,0.114,0.005	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.27:0.749,0.232,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.863:0.324,0.489,0.187	0|0:0:1,0,0	0|0:0.209:0.797,0.198,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.474:0.157,0.213,0.63	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.958,0.04,0.001	0|0:0:1,0,0	0|0:0.031:0.969,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.979:0,0.021,0.979	1|1:2:0,0,1	0|0:0.17:0.84,0.15,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19321635	SNP-3.19320145.	C	A	.	PASS	AR2=0.965;DR2=0.974;AF=0.317	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.43:0.079,0.412,0.509	1|1:2:0,0,1	1|1:1.473:0.07,0.387,0.543	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.919:0.002,0.077,0.921	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.853:0.004,0.139,0.857	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.763:0.02,0.198,0.782	1|1:1.757:0.029,0.186,0.785	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.186:0.814,0.185,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.577:0.045,0.333,0.622	1|1:1.871:0.004,0.121,0.875	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.823:0.008,0.161,0.831	1|1:1.951:0.002,0.044,0.954	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.962:0.001,0.036,0.963	1|1:1.928:0.002,0.069,0.93	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.613:0.04,0.308,0.652	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.464:0.073,0.39,0.537	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.489:0.058,0.396,0.546	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.683:0.02,0.277,0.703	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.967:0,0.032,0.967	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.936:0.001,0.062,0.937	0|0:0.139:0.875,0.111,0.014	1|1:1.847:0.006,0.142,0.852	0|0:0:1,0,0	1|1:1.565:0.046,0.343,0.611	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.499:0.065,0.371,0.564	1|1:1.942:0.001,0.055,0.943	1|1:2:0,0,1	1|1:1.93:0.001,0.068,0.931	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.788:0.008,0.196,0.796	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.617:0.048,0.287,0.665	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19321748	SNP-3.19320258.	C	A	.	PASS	AR2=0.966;DR2=0.977;AF=0.359	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.947:0.001,0.051,0.948	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.529:0.542,0.387,0.071	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.54:0.534,0.392,0.074	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.511:0.555,0.379,0.066	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	1|1:1.944:0.002,0.053,0.945	0|1:1:0,1,0	1|1:1.878:0.004,0.114,0.882	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.883:0.004,0.11,0.886	1|1:1.542:0.002,0.454,0.544	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.896:0.003,0.098,0.899	1|1:1.912:0.002,0.083,0.914	1|1:2:0,0,1	1|1:1.902:0.002,0.093,0.905	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.916:0.002,0.081,0.918	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.451:0.557,0.435,0.008	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.923:0.002,0.074,0.924	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0.001,0.027,0.973	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.889:0.001,0.109,0.89	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.392:0.642,0.325,0.033	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.535:0.538,0.39,0.072	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.534:0.538,0.391,0.072	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.866:0.002,0.13,0.868	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.917:0.003,0.077,0.92	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.519:0.549,0.382,0.069	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.929:0.002,0.067,0.931	1|1:1.957:0.001,0.04,0.959	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.783:0.004,0.208,0.788	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.922:0.002,0.074,0.924	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.965:0.001,0.033,0.966	0|0:0:1,0,0	0|0:0.536:0.536,0.391,0.073	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19321768	SNP-3.19320278.	C	A	.	PASS	AR2=0.991;DR2=0.992;AF=0.344	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.831:0.009,0.151,0.84	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.823:0.008,0.161,0.831	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.027,0.001	0|0:0:1,0,0	0|0:0.063:0.94,0.056,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.94,0.057,0.003	0|0:0.026:0.974,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.941,0.058,0.001	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.883:0.002,0.114,0.885	1|1:1.891:0.002,0.105,0.893	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.819:0.007,0.166,0.827	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.907:0.001,0.09,0.909	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0,0.021,0.978	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.971:0,0.028,0.972	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.85:0.004,0.141,0.854	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	1|1:1.952:0.001,0.047,0.952	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.845:0.008,0.139,0.853	1|1:1.981:0,0.019,0.981	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.864:0.004,0.129,0.867	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.848:0.01,0.132,0.858	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19321908	SNP-3.19320418.	A	G	.	PASS	AR2=0.973;DR2=0.981;AF=0.284	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.07:0.932,0.067,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.105:0.897,0.101,0.002	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.153:0.857,0.132,0.01	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.54:0.534,0.392,0.074	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.982:0,0.017,0.983	0|0:0:1,0,0	0|1:1.195:0.042,0.72,0.238	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.969,0.03,0.001	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.985:0,0.015,0.985	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.073:0.928,0.071,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.163:0.846,0.144,0.009	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.082:0.921,0.075,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.096:0.907,0.089,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.516:0.55,0.383,0.067	0|0:0:1,0,0	1|1:1.938:0.001,0.06,0.939	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.505:0.558,0.378,0.063	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.23:0.787,0.196,0.017	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.201:0.036,0.726,0.238	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.501:0.562,0.375,0.063	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.501:0.561,0.376,0.062	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	1|1:2:0,0,1
+3	19322247	SNP-3.19320757.	A	G	.	PASS	AR2=0.988;DR2=0.993;AF=0.268	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.547:0.528,0.397,0.075	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.2:0.002,0.796,0.202	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.608:0.485,0.423,0.092	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.568:0.514,0.405,0.081	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19323330	SNP-3.19321840.	C	A	.	PASS	AR2=0.981;DR2=0.985;AF=0.32	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.649:0.032,0.288,0.681	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.624:0.036,0.304,0.66	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.851:0.002,0.145,0.853	1|1:2:0,0,1	1|1:1.808:0.009,0.174,0.817	1|1:1.712:0.026,0.236,0.738	1|1:2:0,0,1	1|1:1.849:0.003,0.145,0.852	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:1.647:0.032,0.29,0.678	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.097:0.903,0.097,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.843:0.003,0.151,0.846	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.597:0.045,0.313,0.642	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.609:0.035,0.321,0.644	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.959:0,0.04,0.96	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.718:0.018,0.246,0.736	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.901:0.003,0.093,0.904	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.948:0.001,0.051,0.948	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.012,0.987	1|1:2:0,0,1	1|1:1.961:0.001,0.038,0.961	1|1:1.981:0,0.018,0.982	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.699:0.026,0.25,0.724	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19325067	SNP-3.19323577.	A	G	.	PASS	AR2=0.975;DR2=0.979;AF=0.551	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.85:0.004,0.142,0.854	1|1:1.897:0.006,0.091,0.903	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.852:0.006,0.137,0.857	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.7:0.015,0.27,0.715	1|1:2:0,0,1	1|1:1.913:0.002,0.083,0.915	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.806:0.011,0.173,0.817	1|1:2:0,0,1	1|1:1.869:0.004,0.123,0.873	1|1:1.762:0.014,0.21,0.776	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.815:0.011,0.163,0.826	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.914:0.002,0.083,0.916	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1.099:0.086,0.729,0.185	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.552:0.103,0.243,0.654	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.899:0.003,0.095,0.902	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.979:0,0.02,0.98	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.927:0.123,0.827,0.05	1|1:1.555:0.022,0.401,0.577	0|1:1:0,1,0	1|1:1.898:0.003,0.095,0.901	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.953:0.001,0.044,0.955	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.911:0.002,0.084,0.914	1|1:1.721:0.048,0.184,0.769	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.912:0.004,0.08,0.916	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.859:0.005,0.132,0.864	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.947:0.001,0.051,0.948	1|1:2:0,0,1	1|1:1.938:0.001,0.06,0.939	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.869:0.005,0.121,0.874	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.817:0.009,0.165,0.826	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.954:0.003,0.041,0.957	1|1:1.832:0.008,0.152,0.84	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.915:0.002,0.082,0.917	0|1:1:0,1,0	1|1:1.863:0.002,0.132,0.865	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.853:0.005,0.136,0.858	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.907:0.003,0.087,0.91	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.907:0.002,0.089,0.909	1|1:1.96:0.001,0.038,0.961	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.898:0.004,0.095,0.902	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.863:0.009,0.118,0.872	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.944:0.001,0.053,0.945	0|0:0:1,0,0	1|1:2:0,0,1
+3	19330460	SNP-3.19328970.	A	G	.	PASS	AR2=0.904;DR2=0.928;AF=0.21	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.148:0.856,0.14,0.004	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.368:0.665,0.302,0.033	0|0:0:1,0,0	0|0:0.374:0.661,0.304,0.035	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.39:0.651,0.307,0.041	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:0.931:0.291,0.488,0.222	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.927,0.07,0.003	0|0:0.217:0.792,0.198,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.55:0.499,0.453,0.049	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.153:0.856,0.135,0.009	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.997:0.219,0.564,0.217	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.021:0.979,0.021,0	0|0:0.084:0.918,0.081,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.134:0.874,0.119,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.452:0.072,0.404,0.524	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.925:0.233,0.609,0.158	0|0:0.411:0.616,0.357,0.027	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.132:0.871,0.126,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.181:0.831,0.157,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.122:0.88,0.119,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.305:0.719,0.258,0.023	0|0:0:1,0,0	0|1:0.569:0.507,0.417,0.076	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.508:0.518,0.456,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.173:0.119,0.589,0.292	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.434:0.085,0.396,0.519	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.048:0.953,0.045,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.042:0.958,0.042,0	0|0:0.315:0.712,0.262,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.958,0.042,0	0|1:0.839:0.34,0.48,0.18	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.503:0.065,0.367,0.568	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.493:0.61,0.287,0.103	0|0:0.36:0.674,0.293,0.033	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.326:0.705,0.264,0.031	0|0:0:1,0,0	1|0:0.786:0.386,0.441,0.173	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.437:0.083,0.396,0.521	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.477:0.065,0.393,0.542	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0.181:0.848,0.123,0.029	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.131:0.136,0.596,0.268	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.386:0.652,0.31,0.038	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.139:0.868,0.125,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.243:0.78,0.197,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.019:0.981,0.019,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.274:0.73,0.266,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	19339191	SNP-3.19337701.	A	G	.	PASS	AR2=0.985;DR2=0.989;AF=0.279	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.115:0.889,0.107,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.095:0.909,0.088,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.662:0.365,0.609,0.026	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.933,0.066,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.906,0.091,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.245:0.773,0.208,0.018	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.158:0.848,0.147,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.365:0.672,0.291,0.037	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.01:0.99,0.01,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.917:0,0.082,0.917	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.14:0.871,0.117,0.011	1|0:0.631:0.495,0.38,0.126	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19340848	SNP-3.19339358.	C	A	.	PASS	AR2=0.992;DR2=0.994;AF=0.356	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:1.97:0,0.029,0.97	1|1:1.981:0,0.018,0.981	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.047:0.953,0.047,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.985:0,0.014,0.985	1|1:1.918:0,0.082,0.918	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.937:0.003,0.058,0.94	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.993:0,0.006,0.994	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.113:0.89,0.108,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.969:0,0.031,0.969	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.823:0.014,0.148,0.838	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.709:0.445,0.4,0.154	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.916:0.005,0.074,0.921	1|1:2:0,0,1	1|1:1.969:0,0.03,0.969	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0
+3	19341601	SNP-3.19340111.	A	G	.	PASS	AR2=0.952;DR2=0.963;AF=0.475	GT:DS:GP	1|1:1.799:0.013,0.175,0.812	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.799:0.008,0.185,0.807	1|1:1.921:0,0.079,0.921	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.291:0.11,0.49,0.401	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.925:0.001,0.072,0.926	0|0:0:1,0,0	1|1:1.929:0.002,0.067,0.931	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.951:0.001,0.048,0.952	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.906:0.008,0.079,0.913	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.941:0.001,0.057,0.942	1|1:1.949:0.001,0.048,0.95	1|1:1.774:0.01,0.206,0.784	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.851:0.005,0.138,0.857	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.101:0.908,0.084,0.008	1|1:1.358:0.1,0.443,0.457	1|1:1.357:0.114,0.414,0.472	1|1:1.69:0.019,0.272,0.709	1|1:1.903:0.002,0.092,0.905	0|0:0:1,0,0	1|1:1.601:0.016,0.368,0.617	1|0:0.731:0.431,0.407,0.162	1|0:1.237:0.144,0.476,0.381	0|0:0:1,0,0	0|0:0.018:0.982,0.017,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|1:1.626:0.032,0.31,0.658	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.983:0,0.017,0.983	1|1:1.726:0.021,0.232,0.747	1|1:1.814:0.005,0.176,0.819	1|1:1.966:0.001,0.033,0.966	0|1:0.965:0.27,0.495,0.235	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.919:0.099,0.884,0.018	0|0:0:1,0,0	1|1:1.885:0.002,0.11,0.888	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.795:0.011,0.182,0.806	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.957,0.043,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.813:0.24,0.707,0.053	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.905,0.093,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.037:0.964,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.167:0.839,0.156,0.006	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.035:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.959,0.041,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.898:0.006,0.09,0.904	0|0:0.031:0.97,0.029,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.977,0.023,0	0|0:0.002:0.998,0.002,0	1|1:1.852:0.003,0.142,0.855	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.924:0.002,0.072,0.926	1|1:2:0,0,1	1|1:1.971:0.001,0.028,0.971	1|1:1.568:0.043,0.346,0.611	1|1:1.617:0.077,0.23,0.693	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.017:0.983,0.017,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.964:0,0.035,0.964	1|1:1.986:0,0.013,0.986	1|1:2:0,0,1	1|1:1.826:0.019,0.137,0.845	1|1:2:0,0,1	1|1:1.966:0,0.033,0.966	0|0:0.018:0.982,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.532:0.05,0.367,0.583	0|0:0.283:0.741,0.234,0.024	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.931:0.002,0.065,0.933	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.849:0.021,0.109,0.87	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.766:0.003,0.229,0.768	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.036:0.964,0.035,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	19350828	SNP-3.19349338.	A	G	.	PASS	AR2=0.934;DR2=0.948;AF=0.559	GT:DS:GP	1|1:1.689:0.02,0.272,0.708	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.832:0.006,0.156,0.838	1|1:2:0,0,1	1|1:1.902:0.004,0.09,0.906	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.917:0.001,0.081,0.918	1|1:1.928:0.002,0.067,0.931	1|1:1.914:0.003,0.081,0.916	1|1:1.197:0.208,0.387,0.405	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.809:0.012,0.167,0.821	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.946:0.307,0.44,0.253	0|0:0.874:0.325,0.475,0.2	1|1:1.84:0.007,0.146,0.847	1|1:1.652:0.044,0.261,0.695	1|1:1.999:0,0.001,0.999	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.631:0.037,0.295,0.668	1|1:1.714:0.026,0.235,0.739	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.749:0.021,0.21,0.769	1|1:1.54:0.035,0.391,0.575	1|1:2:0,0,1	0|1:0.94:0.253,0.553,0.194	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.805:0.01,0.176,0.814	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.459:0.079,0.382,0.539	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:1.87:0.008,0.114,0.878	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.894:0.008,0.09,0.902	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.773:0.013,0.202,0.785	1|1:1.857:0.005,0.133,0.862	1|1:2:0,0,1	1|0:0.914:0.291,0.504,0.205	1|1:1.688:0.034,0.243,0.722	1|1:1.807:0,0.193,0.807	1|1:2:0,0,1	1|1:1.604:0.061,0.274,0.665	1|1:1.983:0,0.017,0.983	0|1:1.234:0.159,0.448,0.393	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.968:0,0.031,0.968	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.934,0.066,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.629:0.028,0.315,0.657	0|0:0:1,0,0	0|0:0.528:0.556,0.359,0.085	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.496:0.126,0.252,0.622	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.799:0.387,0.427,0.186	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.484:0.572,0.372,0.056	0|0:0:1,0,0	1|1:1.973:0,0.027,0.973	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:1.9:0.005,0.09,0.905	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.827:0.021,0.131,0.848	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.569:0.535,0.362,0.103	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.712:0.016,0.257,0.728	1|1:1.969:0,0.031,0.969	1|1:2:0,0,1	1|1:1.062:0.216,0.507,0.277	0|0:0:1,0,0	1|1:1.915:0.004,0.076,0.919	1|1:1.836:0.006,0.151,0.843	1|1:2:0,0,1	1|1:1.942:0.001,0.057,0.943	0|0:0:1,0,0	1|1:1.532:0.103,0.262,0.635	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.297:0.129,0.446,0.426	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	19351341	SNP-3.19349851.	C	A	.	PASS	AR2=0.991;DR2=0.992;AF=0.366	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.966,0.033,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.156:0.847,0.15,0.003	0|0:0.069:0.933,0.066,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.967,0.033,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.804:0.018,0.161,0.822	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0.028:0.973,0.026,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.026,0.974	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.958:0.001,0.04,0.959	1|1:1.995:0,0.005,0.995	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|0:0.957:0.046,0.95,0.004	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.028,0.972	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:1.963:0.001,0.036,0.964	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.978:0,0.022,0.978	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:1.998:0,0.002,0.998	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.085:0.917,0.081,0.002	0|0:0.013:0.987,0.013,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.917:0.006,0.072,0.922	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.072:0.93,0.069,0.002	0|0:0.095:0.908,0.089,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.933,0.066,0.001	1|1:1.982:0,0.017,0.983	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.971,0.028,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.787:0.393,0.428,0.18	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:1.998:0,0.002,0.998	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.086:0.92,0.074,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19352903	SNP-3.19351413.	A	G	.	PASS	AR2=0.844;DR2=0.884;AF=0.221	GT:DS:GP	0|0:0.433:0.618,0.331,0.051	1|1:2:0,0,1	0|0:0.548:0.524,0.403,0.072	0|0:0.617:0.492,0.4,0.109	1|0:1.113:0.243,0.4,0.357	0|0:0.115:0.888,0.109,0.003	0|1:0.75:0.393,0.465,0.143	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:0.809:0.373,0.445,0.182	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.702:0.456,0.385,0.158	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.311:0.72,0.249,0.031	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.744:0.396,0.464,0.14	1|1:2:0,0,1	1|1:1.336:0.193,0.278,0.529	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.833:0.35,0.466,0.183	1|1:2:0,0,1	1|0:0.757:0.383,0.476,0.14	0|0:0:1,0,0	1|1:0.941:0.309,0.441,0.25	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.846:0.365,0.424,0.211	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.956:0,0.044,0.956	1|1:2:0,0,1	1|0:0.634:0.486,0.394,0.12	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.638:0.483,0.396,0.121	0|1:1.059:0.191,0.559,0.25	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.137:0.253,0.358,0.389	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.265:0.753,0.229,0.018	0|0:0.377:0.65,0.323,0.027	0|0:0.143:0.86,0.136,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.059:0.945,0.052,0.004	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.433:0.613,0.341,0.046	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0.332:0.694,0.279,0.027	0|0:0.181:0.827,0.166,0.008	0|0:0.035:0.965,0.034,0.001	1|1:2:0,0,1	1|0:0.7:0.431,0.437,0.132	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.587:0.486,0.442,0.072	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.132:0.872,0.124,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.024,0	0|0:0.12:0.882,0.117,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.725:0.408,0.459,0.133	0|0:0.553:0.521,0.405,0.074	0|0:0.157:0.845,0.154,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.245:0.773,0.209,0.018	0|0:0:1,0,0	1|0:0.67:0.442,0.447,0.112	0|0:0.239:0.78,0.201,0.019	0|1:0.755:0.39,0.464,0.146	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.126:0.875,0.125,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.743:0.401,0.455,0.144	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.643:0.428,0.502,0.07	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.647:0.462,0.429,0.109	0|0:0.265:0.8,0.134,0.065	1|1:2:0,0,1	0|0:0.226:0.787,0.201,0.012	0|0:0.064:0.938,0.06,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.142:0.861,0.137,0.002	1|1:1.842:0.005,0.149,0.846	0|0:0.122:0.885,0.108,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.958,0.04,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.249:0.77,0.211,0.019	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.472:0.603,0.323,0.074	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.629:0.071,0.229,0.7	0|0:0:1,0,0	0|0:0.112:0.891,0.106,0.003	0|0:0:1,0,0	0|0:0.048:0.955,0.042,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.05:0.953,0.044,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.227:0.834,0.104,0.062	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.294:0.735,0.236,0.029	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.597:0.537,0.328,0.134	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19353261	SNP-3.19351771.	C	A	.	PASS	AR2=0.969;DR2=0.974;AF=0.43	GT:DS:GP	0|0:0.083:0.919,0.079,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.112:0.892,0.105,0.004	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.073:0.929,0.069,0.002	1|1:2:0,0,1	0|0:0.16:0.848,0.145,0.007	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.114:0.89,0.106,0.004	0|0:0.09:0.913,0.084,0.003	0|0:0.028:0.973,0.027,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.126:0.88,0.113,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.126:0.879,0.117,0.004	0|1:1.09:0.261,0.388,0.351	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:0.689:0.438,0.435,0.127	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.145:0.859,0.138,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.214:0.795,0.196,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.308:0.016,0.659,0.324	1|1:2:0,0,1	0|0:0.408:0.633,0.327,0.041	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.016,0.983	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.93:0.002,0.066,0.932	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.018:0.983,0.017,0	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.112:0.892,0.105,0.003	0|0:0.047:0.954,0.045,0.001	0|0:0.216:0.795,0.194,0.011	0|0:0.05:0.952,0.046,0.002	1|1:1.963:0.001,0.034,0.965	1|0:1:0,1,0	0|0:0.11:0.893,0.103,0.004	0|0:0:1,0,0	1|1:1.966:0.001,0.032,0.967	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.755:0.279,0.687,0.034	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.151:0.856,0.137,0.007	0|0:0.102:0.9,0.097,0.003	0|0:0:1,0,0	0|0:0.124:0.88,0.115,0.005	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.103:0.902,0.093,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.849:0.017,0.117,0.866	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.926,0.072,0.002	0|0:0.037:0.965,0.034,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:1.916:0,0.084,0.916	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.011:0.989,0.01,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.952,0.045,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.962:0.001,0.036,0.963	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.03:0.97,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.37:0.728,0.174,0.098	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0.238:0.78,0.201,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.894:0.362,0.382,0.256	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.93,0.066,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.953,0.047,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0,0.031,0.968	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.015:0.985,0.014,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.018:0.983,0.017,0	0|0:0.115:0.89,0.106,0.004	0|0:0.058:0.943,0.055,0.002	1|1:2:0,0,1	0|0:0:1,0,0
+3	19354321	SNP-3.19352831.	C	A	.	PASS	AR2=0.952;DR2=0.963;AF=0.297	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.249:0.162,0.427,0.411	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.558:0.062,0.317,0.621	1|1:2:0,0,1	1|1:1.573:0.061,0.305,0.634	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.081:0.921,0.078,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.124:0.877,0.121,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.968,0.032,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.077:0.929,0.066,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|0:1.384:0.103,0.411,0.486	1|1:1.76:0.011,0.219,0.771	0|0:0.623:0.395,0.587,0.018	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.822:0.004,0.17,0.826	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.734:0.332,0.602,0.066	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.971:0,0.029,0.971	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.262:0.153,0.433,0.415	0|1:0.763:0.403,0.431,0.166	0|0:0:1,0,0	1|1:1.897:0.003,0.097,0.9	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.312:0.122,0.444,0.434	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.668:0.019,0.294,0.687	1|1:1.989:0,0.011,0.989	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.964:0.001,0.034,0.965	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.95:0.001,0.048,0.951	1|1:1.909:0.001,0.09,0.909	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.947:0.001,0.052,0.947	1|1:1.943:0,0.056,0.944	0|0:0:1,0,0	1|1:1.963:0,0.036,0.963	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.157:0.179,0.485,0.336	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.099:0.905,0.09,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.653:0.02,0.306,0.674	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.29:0.144,0.422,0.434	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.077:0.929,0.065,0.006	1|1:1.938:0.001,0.061,0.938	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0.034:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.021:0.979,0.02,0	0|0:0.04:0.96,0.039,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.955:0.001,0.044,0.956	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.285:0.135,0.445,0.42	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:1.959:0.002,0.037,0.961	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.591:0.06,0.289,0.651	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0
+3	19354906	SNP-3.19353416.	C	A	.	PASS	AR2=0.997;DR2=0.998;AF=0.457	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.128:0.873,0.126,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.118:0,0.882,0.118	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.594:0.039,0.327,0.633	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.984:0,0.015,0.985	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19356291	SNP-3.19354801.	C	A	.	PASS	AR2=0.996;DR2=0.996;AF=0.347	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:1.826:0.007,0.159,0.834	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.741:0.011,0.236,0.753	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.811:0.01,0.17,0.82	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.272:0.729,0.27,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.967:0,0.033,0.967	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	19365137	SNP-3.19363647.	C	A	.	PASS	AR2=0.97;DR2=0.975;AF=0.319	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.76:0.018,0.203,0.778	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.957:0,0.042,0.958	1|0:1.204:0.15,0.496,0.354	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1.226:0.146,0.481,0.373	1|1:2:0,0,1	1|0:1.324:0.117,0.442,0.441	0|1:1.286:0.129,0.456,0.415	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0,0.025,0.975	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.222:0.148,0.483,0.37	1|1:1.24:0.15,0.46,0.39	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.779:0.012,0.196,0.792	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	1|1:1.983:0,0.016,0.983	1|1:2:0,0,1	1|1:1.973:0,0.027,0.973	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.181:0.174,0.471,0.355	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.981:0,0.019,0.981	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.782:0.013,0.192,0.795	1|1:1.964:0.001,0.034,0.965	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.424:0.094,0.387,0.519	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.861:0.006,0.128,0.866	1|1:1.792:0.012,0.185,0.803	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.315:0.113,0.46,0.428	0|0:0:1,0,0
+3	19365516	SNP-3.19364026.	A	G	.	PASS	AR2=0.987;DR2=0.989;AF=0.516	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.965:0,0.035,0.965	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	1|1:1.855:0.003,0.139,0.858	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.945:0.001,0.053,0.946	1|1:1.921:0.001,0.076,0.923	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.838:0.007,0.148,0.845	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.882:0.118,0.882,0	0|1:1:0,0.999,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.833:0.008,0.152,0.84	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.967:0,0.033,0.967	0|1:0.931:0.069,0.931,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.883:0.117,0.883,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.836:0.007,0.15,0.843	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.778:0.012,0.197,0.79	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.844:0.006,0.145,0.849	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.965:0.001,0.033,0.966	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.905:0.001,0.092,0.906	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.993:0.007,0.993,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.851:0.003,0.144,0.853	0|0:0:1,0,0	1|1:1.795:0.01,0.184,0.805	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.971:0,0.029,0.971	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.804:0.006,0.183,0.811	1|1:1.86:0.005,0.131,0.864	1|1:1.858:0.005,0.132,0.863	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.835:0.007,0.151,0.842	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.856:0.005,0.135,0.86	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.917:0.003,0.077,0.92	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	19365823	SNP-3.19364333.	C	A	.	PASS	AR2=0.997;DR2=0.997;AF=0.359	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.07:0.931,0.067,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.945,0.054,0.001	0|0:0.06:0.941,0.058,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.168:0.843,0.145,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.943:0,0.057,0.943	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.071:0.932,0.065,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.98:0,0.019,0.981	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.15:0.875,0.099,0.025	0|0:0.034:0.966,0.034,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19366033	SNP-3.19364543.	A	G	.	PASS	AR2=0.998;DR2=0.998;AF=0.203	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.946,0.054,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.934:0.066,0.934,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.161:0.852,0.135,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19367600	SNP-3.19366110.	C	A	.	PASS	AR2=0.967;DR2=0.976;AF=0.355	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.934,0.064,0.002	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.119:0.883,0.116,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.045:0.955,0.044,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.051:0.189,0.57,0.241	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.494:0.05,0.406,0.544	0|1:1.324:0.115,0.446,0.439	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1.339:0.11,0.441,0.449	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.965:0,0.034,0.965	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.867:0.005,0.123,0.872	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.394:0.094,0.418,0.488	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.285:0.738,0.238,0.023	0|0:0:1,0,0	1|1:1.786:0.011,0.192,0.797	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1.338:0.11,0.442,0.448	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.323:0.115,0.446,0.439	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.965,0.034,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.951:0.001,0.047,0.952	0|0:0.291:0.733,0.243,0.024	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.972:0,0.028,0.972	1|1:2:0,0,1	1|1:1.795:0.012,0.181,0.807	1|1:1.975:0,0.025,0.975	0|0:0:1,0,0	1|1:1.942:0.001,0.056,0.943	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.87:0.306,0.518,0.176	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.958:0.001,0.04,0.959	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.108:0.903,0.085,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19368394	SNP-3.19366904.	A	G	.	PASS	AR2=0.987;DR2=0.989;AF=0.496	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.56:0.049,0.343,0.609	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.948:0.001,0.05,0.949	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:1.985:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.875:0.002,0.121,0.877	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.103:0.251,0.395,0.354	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.293:0.738,0.231,0.031	1|1:2:0,0,1	1|1:1.97:0,0.029,0.97	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.869:0.01,0.11,0.88	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.126:0.875,0.123,0.002	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.183:0.831,0.155,0.014	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.321:0.7,0.28,0.02	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.86:0.177,0.786,0.037	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.968:0,0.031,0.969	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.984:0,0.016,0.984	1|1:1.996:0,0.004,0.996	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.984:0,0.015,0.984	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.965:0,0.034,0.966	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.157:0.845,0.153,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.955:0,0.045,0.955	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	19368681	SNP-3.19367191.	C	A	.	PASS	AR2=0.974;DR2=0.978;AF=0.366	GT:DS:GP	0|0:0.017:0.983,0.017,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.643:0.035,0.287,0.678	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.855:0.007,0.132,0.862	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.24:0.772,0.216,0.012	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.163:0.839,0.159,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.258:0.749,0.244,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.935,0.065,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.306:0.736,0.221,0.043	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.335:0.666,0.333,0.001	0|0:0.048:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.335:0.724,0.216,0.059	0|0:0:1,0,0	0|0:0.139:0.861,0.138,0.001	1|1:2:0,0,1	1|1:1.972:0,0.027,0.972	1|1:2:0,0,1	1|1:1.929:0.001,0.069,0.93	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.839:0.007,0.147,0.846	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.96:0.001,0.039,0.96	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.88:0.004,0.112,0.884	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.829:0.008,0.156,0.836	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.952:0.002,0.043,0.955	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.978:0,0.021,0.978	1|1:2:0,0,1	1|1:1.98:0,0.019,0.98	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.956:0,0.043,0.957	1|1:1.895:0.003,0.099,0.898	1|1:2:0,0,1	1|1:1.913:0.006,0.075,0.919	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.096:0.907,0.09,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:1.879:0.004,0.113,0.883	1|1:2:0,0,1	1|1:1.924:0.001,0.074,0.925	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.201:0.8,0.2,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.965:0.001,0.034,0.965	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.968,0.032,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.03:0.97,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	1|1:1.793:0.012,0.183,0.805	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.866:0.005,0.123,0.871	0|0:0:1,0,0	1|1:1.672:0.032,0.264,0.704	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.956,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.836:0.007,0.149,0.844	1|1:2:0,0,1	1|1:1.97:0,0.029,0.971	1|1:1.957:0.001,0.042,0.957	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.972:0,0.027,0.972	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.873:0.005,0.117,0.878	1|1:2:0,0,1	0|0:0.228:0.772,0.228,0	0|0:0.052:0.949,0.049,0.001	0|0:0.001:0.999,0.001,0	1|0:1.063:0.088,0.762,0.15	1|1:2:0,0,1	0|0:0:1,0,0
+3	19368705	SNP-3.19367215.	C	A	.	PASS	AR2=0.97;DR2=0.976;AF=0.325	GT:DS:GP	0|0:0.002:0.998,0.002,0	1|1:1.854:0.009,0.127,0.864	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.696:0.025,0.253,0.721	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.652:0.037,0.274,0.689	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.746:0.018,0.219,0.763	1|1:1.896:0.002,0.099,0.899	1|1:1.878:0.002,0.119,0.88	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.937:0.001,0.062,0.937	1|1:2:0,0,1	1|1:1.744:0.019,0.218,0.763	1|1:1.802:0.009,0.181,0.811	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.921:0.004,0.071,0.925	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.697:0.022,0.259,0.719	1|1:1.814:0.003,0.18,0.817	0|0:0:1,0,0	1|1:1.941:0.001,0.057,0.942	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.831:0.005,0.159,0.836	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.716:0.019,0.245,0.735	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0	1|1:1.966:0.001,0.032,0.967	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:1.875:0,0.124,0.876	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.747:0.015,0.222,0.762	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.906:0.003,0.088,0.909	1|1:1.693:0.01,0.287,0.703	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.575:0.049,0.327,0.624	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.949:0.001,0.049,0.95	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.615:0.519,0.348,0.133	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.967:0,0.033,0.967	0|0:0:1,0,0	1|1:1.746:0.014,0.226,0.76	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.965:0.001,0.033,0.966	1|1:1.765:0.015,0.204,0.78	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.816:0.011,0.161,0.828	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.566:0.06,0.314,0.626	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0,0.025,0.975	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19369044	SNP-3.19367554.	C	A	.	PASS	AR2=0.986;DR2=0.989;AF=0.394	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.108:0.892,0.108,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.862:0.377,0.383,0.24	0|0:0.045:0.955,0.044,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.039:0.961,0.039,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.365:0.642,0.35,0.008	0|0:0:1,0,0	0|0:0.055:0.947,0.051,0.002	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.009,0	0|0:0:1,0,0	0|0:0.046:0.955,0.045,0	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.971:0,0.028,0.971	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.24:0.773,0.214,0.013	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.018:0.982,0.018,0	1|1:1.985:0,0.014,0.985	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.402:0.599,0.399,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.244:0.758,0.24,0.002	0|0:0:1,0,0	0|0:0.243:0.773,0.211,0.016	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.97,0.03,0	0|0:0:1,0,0	0|0:0.072:0.928,0.072,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.617:0.038,0.306,0.655	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.199:0.829,0.143,0.028	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19376452	SNP-3.19374962.	C	A	.	PASS	AR2=0.982;DR2=0.985;AF=0.435	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.226:0.789,0.196,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.511:0.528,0.434,0.039	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.092:0.913,0.081,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.513:0.499,0.489,0.012	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.93:0.001,0.068,0.931	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.118:0.885,0.111,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.128:0.879,0.114,0.007	0|0:0.196:0.811,0.182,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0.241:0.777,0.205,0.018	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.128:0.879,0.114,0.007	0|1:1:0,1,0	0|0:0:1,0,0	0|1:0.879:0.329,0.463,0.208	1|0:1:0,1,0	1|0:0.98:0.278,0.464,0.258	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:0.869:0.278,0.575,0.147	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19382095	SNP-3.19380605.	C	A	.	PASS	AR2=0.984;DR2=0.988;AF=0.402	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.297:0.725,0.253,0.022	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.262:0.756,0.226,0.018	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0.267:0.751,0.231,0.018	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.25:0.765,0.22,0.015	0|0:0.115:0.889,0.108,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.228:0.785,0.201,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.263:0.755,0.228,0.018	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.249:0.766,0.219,0.015	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.245:0.768,0.219,0.013	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.931,0.068,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.032:0.968,0.031,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.093:0.91,0.087,0.003	0|0:0.267:0.751,0.231,0.018	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.952,0.048,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.304:0.719,0.257,0.023	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.83:0,0.17,0.83	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19390968	SNP-3.19389478.	A	G	.	PASS	AR2=0.898;DR2=0.921;AF=0.249	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.308:0.111,0.47,0.419	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.326:0.715,0.243,0.042	1|1:1.289:0.133,0.446,0.422	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.995:0.257,0.49,0.252	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.969:0.242,0.547,0.211	0|0:0:1,0,0	0|1:1.258:0.139,0.464,0.397	0|1:1.135:0.183,0.498,0.318	0|0:0:1,0,0	0|0:0.058:0.946,0.05,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.598:0.6,0.202,0.198	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.679:0.426,0.469,0.105	0|0:0.242:0.775,0.209,0.017	1|1:2:0,0,1	0|0:0.169:0.839,0.153,0.008	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.221:0.789,0.201,0.01	0|1:0.7:0.396,0.508,0.096	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.448:0.581,0.391,0.028	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.142:0.166,0.526,0.308	0|0:0.375:0.673,0.279,0.048	0|1:1.007:0.205,0.583,0.212	1|1:2:0,0,1	0|0:0.257:0.757,0.229,0.014	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.202:0.807,0.183,0.009	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.356:0.682,0.279,0.038	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.247:0.137,0.479,0.384	0|0:0.187:0.832,0.149,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.232:0.132,0.503,0.365	0|0:0.21:0.803,0.184,0.013	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.194:0.165,0.476,0.359	0|0:0.5:0.538,0.424,0.038	0|0:0.178:0.829,0.165,0.006	0|0:0.255:0.751,0.243,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.67:0.469,0.393,0.138	1|1:2:0,0,1	1|1:1.415:0.092,0.401,0.507	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.216:0.222,0.341,0.437	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.644:0.421,0.513,0.066	0|0:0:1,0,0	1|0:1.042:0.199,0.56,0.241	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.245:0.771,0.214,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.227:0.78,0.213,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.232:0.784,0.2,0.016	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:1.063:0.274,0.389,0.337	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.121:0.879,0.12,0.001	1|1:1.443:0.056,0.446,0.498	0|0:0:1,0,0
+3	19404735	SNP-3.19403245.	A	G	.	PASS	AR2=0.975;DR2=0.979;AF=0.226	GT:DS:GP	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.84:0.334,0.492,0.174	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.057:0.241,0.461,0.298	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.049:0.952,0.047,0.001	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.596:0.432,0.54,0.028	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.592:0.028,0.352,0.62	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.03:0.971,0.029,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.578:0.039,0.344,0.617	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.814:0.302,0.583,0.116	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.001:0.999,0.001,0	1|1:1.656:0.038,0.268,0.694	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.77:0.366,0.497,0.136	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19404760	SNP-3.19403270.	C	A	.	PASS	AR2=0.991;DR2=0.994;AF=0.378	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.537:0.524,0.415,0.061	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.22:0.795,0.19,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.09:0.912,0.085,0.002	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.069:0.932,0.066,0.001	0|0:0.211:0.803,0.184,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.449:0.609,0.333,0.058	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.91:0,0.09,0.91	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19405421	SNP-3.19403931.	A	G	.	PASS	AR2=0.991;DR2=0.992;AF=0.31	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.092:0.909,0.09,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.121:0.886,0.108,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.087:0.914,0.085,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.837:0.196,0.772,0.032	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.186:0.823,0.168,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.117:0.886,0.11,0.003	0|0:0:1,0,0	0|0:0.109:0.893,0.104,0.003	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.197:0.813,0.177,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.184:0.825,0.166,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.964,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.957,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.091:0.911,0.088,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.262:0.745,0.249,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.04:0.961,0.038,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.041:0.96,0.04,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	19407854	SNP-3.19406364.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.371	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.346:0.671,0.311,0.017	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.07:0.931,0.068,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.115:0.892,0.101,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.843:0.008,0.142,0.851	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.05:0.951,0.048,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.97,0.03,0	0|0:0.051:0.95,0.049,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	19408391	SNP-3.19406901.	A	G	.	PASS	AR2=0.912;DR2=0.934;AF=0.326	GT:DS:GP	1|0:0.996:0.227,0.549,0.223	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.63:0.371,0.629,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.584:0.483,0.449,0.067	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:0.998:0.278,0.447,0.276	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.799:0.031,0.138,0.831	1|1:2:0,0,1	1|1:1.92:0.006,0.068,0.926	1|1:1.542:0.039,0.379,0.582	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.71:0.403,0.484,0.113	1|1:1.243:0.174,0.409,0.417	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.066:0.936,0.063,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.7:0.425,0.45,0.125	1|0:1.313:0.127,0.432,0.441	1|1:2:0,0,1	0|1:1.086:0.219,0.476,0.305	0|0:0:1,0,0	1|1:1.146:0.196,0.462,0.342	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.956:0.001,0.042,0.957	1|1:1.844:0.007,0.143,0.851	1|1:2:0,0,1	1|1:1.371:0.09,0.448,0.462	0|0:0.081:0.919,0.08,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.342:0.111,0.435,0.454	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.077:0.196,0.531,0.273	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.237:0.158,0.446,0.395	1|0:0.662:0.433,0.473,0.095	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.456:0.069,0.407,0.524	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.666:0.026,0.283,0.692	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.828:0.009,0.154,0.837	0|0:0:1,0,0	0|1:1.221:0.148,0.483,0.369	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.509:0.077,0.337,0.586	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.77:0.02,0.19,0.79	1|1:1.942:0.001,0.056,0.943	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.88:0.005,0.11,0.885	1|1:1.474:0.088,0.351,0.562	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.789:0.019,0.172,0.808	1|1:1.662:0.042,0.253,0.704	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.201:0.212,0.376,0.413	1|0:1.049:0.216,0.519,0.265	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.792:0.011,0.186,0.803	1|1:2:0,0,1	1|1:1.391:0.053,0.503,0.444	0|1:1.362:0.046,0.545,0.408	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.029:0.252,0.466,0.281	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.903:0.01,0.077,0.913	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.735:0.027,0.212,0.762	1|1:1.635:0.05,0.264,0.685	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.927:0.003,0.068,0.929	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19409064	SNP-3.19407574.	C	A	.	PASS	AR2=0.963;DR2=0.972;AF=0.316	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.163:0.845,0.146,0.009	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.963,0.036,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.761:0.017,0.205,0.778	1|1:1.881:0.004,0.11,0.885	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.613:0.007,0.372,0.621	0|1:1.429:0.086,0.398,0.515	1|0:1:0,1,0	1|0:1.434:0.078,0.409,0.513	0|0:0:1,0,0	1|1:1.646:0.029,0.296,0.675	0|1:1.112:0.203,0.481,0.315	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1.306:0.11,0.473,0.416	1|1:2:0,0,1	1|1:1.803:0.007,0.182,0.81	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.926:0.002,0.069,0.928	1|1:2:0,0,1	1|1:1.768:0.006,0.22,0.774	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.963:0.001,0.035,0.964	1|1:2:0,0,1	1|1:1.958:0,0.041,0.958	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.647:0.047,0.259,0.694	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.426:0.087,0.4,0.513	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.072:0.929,0.07,0.001	1|1:1.605:0.042,0.312,0.646	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.134:0.872,0.123,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.955:0.001,0.043,0.956	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.023:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.655:0.036,0.274,0.691	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.82:0.013,0.153,0.833	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.94:0.001,0.057,0.941	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.807:0.012,0.17,0.819	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.669:0.034,0.264,0.703	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19409221	SNP-3.19407731.	C	A	.	PASS	AR2=0.995;DR2=0.995;AF=0.472	GT:DS:GP	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.214:0.79,0.206,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.146:0.863,0.128,0.009	0|0:0:1,0,0	1|1:1.893:0.01,0.088,0.902	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.946,0.054,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.108:0.896,0.1,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.824:0.009,0.159,0.832	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.929:0.001,0.069,0.93	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.13:0.875,0.121,0.005	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.111:0.892,0.105,0.003	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.072:0.929,0.069,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19412162	SNP-3.19410672.	C	A	.	PASS	AR2=0.997;DR2=0.997;AF=0.476	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.129:0.876,0.119,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.812:0,0.188,0.812	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.07:0,0.93,0.07	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.962:0.001,0.037,0.963	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.942:0.001,0.055,0.944	1|0:1:0,1,0	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	1|1:1.891:0.004,0.101,0.895	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.935:0.002,0.062,0.936	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.953:0.001,0.046,0.953	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19414835	SNP-3.19413345.	C	A	.	PASS	AR2=0.986;DR2=0.988;AF=0.403	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.148:0.858,0.136,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.251:0.768,0.213,0.019	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.278:0.758,0.205,0.037	0|0:0.34:0.682,0.297,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.154:0.854,0.138,0.008	0|0:0:1,0,0	0|0:0.126:0.879,0.115,0.005	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.149:0.868,0.116,0.016	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.087:0.916,0.082,0.002	0|0:0.156:0.85,0.143,0.006	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.06:0.941,0.057,0.001	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.953,0.047,0	1|1:2:0,0,1	0|0:0.049:0.952,0.046,0.001	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.165:0.841,0.152,0.007	1|0:1:0,1,0	0|0:0.253:0.767,0.213,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.941,0.058,0.001	0|0:0.054:0.946,0.054,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.048:0.952,0.048,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.03:0.971,0.029,0	0|0:0:1,0,0	0|0:0.188:0.814,0.183,0.002	0|0:0.251:0.75,0.249,0.001	1|1:2:0,0,1	0|0:0:1,0,0
+3	19415864	SNP-3.19414374.	A	G	.	PASS	AR2=0.993;DR2=0.994;AF=0.236	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.38:0.005,0.609,0.386	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.003,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	1|0:0.763:0.242,0.753,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	1|0:1.152:0.002,0.844,0.154	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:1.967:0,0.032,0.968	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.924:0.076,0.924,0	0|0:0.107:0.896,0.102,0.002	1|1:2:0,0,1	1|0:0.961:0.068,0.902,0.029	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0.097:0.903,0.096,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19417157	SNP-3.19415667.	C	A	.	PASS	AR2=0.975;DR2=0.981;AF=0.325	GT:DS:GP	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.72:0.021,0.239,0.74	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.022,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.797:0.01,0.182,0.808	1|1:1.965:0,0.035,0.965	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.511:0.075,0.338,0.586	1|0:1:0,1,0	1|1:1.621:0.036,0.307,0.657	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.455:0.545,0.455,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.578:0.049,0.324,0.627	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.884:0.008,0.1,0.892	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.952:0.001,0.047,0.952	1|1:2:0,0,1	1|1:1.813:0.008,0.171,0.821	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.938:0.001,0.059,0.94	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.022:0,0.978,0.022	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.219:0.104,0.573,0.323	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.588:0.046,0.319,0.634	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.717:0.021,0.241,0.738	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.948:0.001,0.049,0.949	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.743:0.018,0.221,0.761	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.746:0.027,0.201,0.773	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.96:0.001,0.038,0.961	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.763:0.018,0.201,0.781	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19417344	SNP-3.19415854.	C	A	.	PASS	AR2=0.956;DR2=0.965;AF=0.399	GT:DS:GP	0|0:0.107:0.895,0.103,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.294:0.727,0.251,0.021	0|0:0.001:0.999,0.001,0	0|0:0.355:0.676,0.293,0.031	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.322:0.704,0.269,0.026	0|0:0.245:0.77,0.214,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.573:0.491,0.446,0.064	0|0:0.211:0.798,0.192,0.01	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.3:0.725,0.249,0.026	0|0:0.331:0.698,0.274,0.028	0|0:0.157:0.85,0.142,0.007	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.205:0.805,0.185,0.01	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.349:0.682,0.286,0.031	0|0:0:1,0,0	0|0:0.25:0.766,0.218,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.128:0.872,0.128,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.243:0.769,0.219,0.012	0|0:0.054:0.947,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.487:0.528,0.457,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.099:0.903,0.094,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.109:0.891,0.109,0	0|0:0:1,0,0	0|0:0.128:0.872,0.128,0	0|0:0.001:0.999,0.001,0	0|0:0.109:0.894,0.104,0.003	0|0:0.136:0.873,0.118,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.949,0.051,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.078:0.922,0.078,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.07:0.93,0.069,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.965,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.234:0.781,0.205,0.015	0|0:0.299:0.724,0.253,0.023	0|0:0.283:0.737,0.244,0.02	1|1:2:0,0,1	0|0:0.41:0.627,0.336,0.037	0|0:0.062:0.939,0.06,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.024,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.235:0.78,0.205,0.015	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	0|0:0.27:0.749,0.232,0.019	0|0:0:1,0,0	0|0:0.322:0.704,0.27,0.026	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.949,0.051,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.117:0.887,0.11,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.336:0.693,0.279,0.029	0|0:0.061:0.94,0.059,0.001	1|1:2:0,0,1	0|0:0.111:0.892,0.104,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.764:0.001,0.234,0.765	0|0:0:1,0,0	0|0:0.052:0.949,0.05,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.28:0.739,0.241,0.02	0|0:0.232:0.784,0.201,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.067:0.934,0.065,0.001	0|0:0.103:0.9,0.097,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.14:0.869,0.122,0.009	0|0:0.3:0.729,0.243,0.028	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19420407	SNP-3.19418917.	A	G	.	PASS	AR2=0.988;DR2=0.99;AF=0.258	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.952,0.047,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.088:0.914,0.084,0.002	0|0:0:1,0,0	1|1:1.979:0,0.021,0.979	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1.383:0.005,0.607,0.388	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.852:0.246,0.656,0.098	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.111:0.889,0.111,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.041:0.959,0.041,0	0|1:0.966:0.037,0.961,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.102:0.9,0.097,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.329:0.697,0.277,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.109:0.891,0.109,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.023:0.978,0.022,0	0|0:0:1,0,0	0|0:0.28:0.728,0.263,0.009	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.078:0.924,0.075,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19422085	SNP-3.19420595.	A	G	.	PASS	AR2=0.984;DR2=0.988;AF=0.215	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.332:0.013,0.643,0.344	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.049:0.951,0.049,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.847:0.005,0.142,0.852	1|1:2:0,0,1	0|0:0.482:0.589,0.34,0.071	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.779:0.257,0.707,0.036	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.224:0.788,0.199,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.144:0.864,0.129,0.008	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.933:0.002,0.064,0.935	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.489:0.026,0.458,0.516	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19422174	SNP-3.19420684.	C	A	.	PASS	AR2=0.982;DR2=0.985;AF=0.357	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.886:0.004,0.106,0.89	1|1:2:0,0,1	1|1:1.729:0.014,0.243,0.743	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:1.852:0.007,0.133,0.86	0|0:0:1,0,0	0|0:0.032:0.969,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.063:0.938,0.062,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0.22:0.782,0.215,0.002	0|0:0.026:0.974,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.978,0.022,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.951:0.001,0.047,0.952	1|1:2:0,0,1	1|1:1.913:0.003,0.081,0.916	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.778:0.011,0.2,0.789	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.812:0.01,0.169,0.821	1|1:2:0,0,1	1|1:1.825:0.009,0.158,0.834	1|1:1.85:0.008,0.135,0.858	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.909:0.002,0.087,0.911	1|1:2:0,0,1	1|1:1.829:0.008,0.155,0.837	0|0:0:1,0,0	1|1:1.981:0,0.018,0.981	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.805:0.009,0.178,0.813	0|0:0:1,0,0	1|1:1.845:0.006,0.143,0.851	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.923:0.001,0.075,0.924	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:1.968:0,0.032,0.968	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:1.959:0.001,0.039,0.96	1|1:2:0,0,1	0|0:0.056:0.945,0.055,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.819:0.009,0.163,0.828	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.851:0.003,0.143,0.854	0|0:0:1,0,0	1|1:1.859:0.007,0.126,0.867	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.156:0.858,0.129,0.013	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.874:0.004,0.119,0.878	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.942:0.001,0.055,0.943	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.718:0.02,0.242,0.738	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.91:0.001,0.088,0.911	0|0:0:1,0,0
+3	19422218	SNP-3.19420728.	C	A	.	PASS	AR2=0.995;DR2=0.995;AF=0.361	GT:DS:GP	0|0:0.024:0.976,0.024,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.069:0.931,0.069,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.044:0.956,0.044,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.082:0.921,0.077,0.003	0|0:0.049:0.952,0.048,0.001	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.034:0.967,0.033,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.971,0.029,0.001	0|0:0.211:0.792,0.205,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.034,0	0|0:0:1,0,0	0|0:0.063:0.937,0.062,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.962,0.037,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.962,0.038,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.969:0,0.03,0.97	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.977:0,0.022,0.977	1|1:1.968:0,0.032,0.968	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.977:0,0.022,0.978	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.994:0.037,0.933,0.03	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.984:0,0.015,0.984	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.028:0.973,0.026,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.965:0,0.035,0.965	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.979:0,0.02,0.979	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.963:0,0.036,0.963	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.041:0.96,0.04,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19422797	SNP-3.19421307.	C	A	.	PASS	AR2=0.996;DR2=0.996;AF=0.377	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.085:0.917,0.081,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.126:0.879,0.117,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.062:0.939,0.059,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.057:0.945,0.054,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.087:0.913,0.086,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.945,0.055,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.09:0.912,0.086,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.971:0,0.028,0.971	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.98:0,0.02,0.98	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.194:0.811,0.183,0.005	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.036:0.965,0.035,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19425823	SNP-3.19424333.	C	A	.	PASS	AR2=1;DR2=1;AF=0.364	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.019:0.981,0.019,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19425921	SNP-3.19424431.	C	A	.	PASS	AR2=0.947;DR2=0.963;AF=0.356	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.302:0.044,0.61,0.346	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.446:0.076,0.402,0.522	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.178:0.827,0.169,0.005	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.582:0.512,0.393,0.095	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.389:0.655,0.302,0.043	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.178:0.833,0.156,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.156:0.853,0.139,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.334:0.692,0.283,0.026	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0.037:0.963,0.037,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.666:0.027,0.279,0.694	1|1:2:0,0,1	0|0:0.091:0.911,0.087,0.002	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.234:0.148,0.471,0.381	0|1:1.311:0.122,0.445,0.433	1|1:2:0,0,1	1|0:1.285:0.131,0.454,0.416	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.723:0.019,0.239,0.742	1|1:1.466:0.07,0.394,0.536	1|1:1.355:0.096,0.454,0.451	0|0:0:1,0,0	1|1:1.945:0.001,0.053,0.946	0|0:0:1,0,0	1|1:1.886:0.008,0.098,0.894	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.596:0.043,0.317,0.64	0|0:0:1,0,0	0|1:1.385:0.096,0.423,0.481	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.706:0.008,0.277,0.715	1|1:1.868:0.007,0.117,0.876	0|0:0.066:0.936,0.062,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.016,0.983	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.133:0.872,0.122,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0.19:0.819,0.173,0.009	0|0:0.147:0.856,0.142,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.985:0,0.015,0.985	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.257:0.762,0.219,0.019	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.118:0.887,0.107,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.28:0.736,0.247,0.017	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.666:0.013,0.309,0.678	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:1.014:0.327,0.333,0.34	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0
+3	19426001	SNP-3.19424511.	C	A	.	PASS	AR2=0.93;DR2=0.945;AF=0.449	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.286:0.735,0.245,0.021	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.526:0.055,0.364,0.581	0|0:0:1,0,0	0|0:0.39:0.649,0.311,0.04	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.754:0.018,0.21,0.772	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.484:0.579,0.358,0.063	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.353:0.681,0.285,0.034	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.301:0.722,0.256,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.187:0.819,0.174,0.006	0|0:0.079:0.923,0.074,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.338:0.695,0.271,0.034	0|0:0.201:0.805,0.189,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.455:0.044,0.457,0.499	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.599:0.041,0.318,0.64	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.156:0.851,0.142,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.969:0.162,0.708,0.131	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.848:0.007,0.139,0.855	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.655:0.029,0.286,0.684	1|1:2:0,0,1	1|1:1.72:0.021,0.239,0.741	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.675:0.028,0.269,0.703	1|1:1.774:0.013,0.2,0.787	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0,0.031,0.969	1|0:0.937:0.146,0.771,0.083	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.607:0.04,0.313,0.647	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.577:0.041,0.341,0.618	0|1:1.428:0.069,0.433,0.497	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.79:0.018,0.173,0.808	1|1:2:0,0,1	1|1:1.829:0.012,0.147,0.841	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.608:0.45,0.492,0.058	1|0:0.853:0.243,0.66,0.097	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0.151:0.856,0.137,0.007	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.141:0.193,0.472,0.335	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.319:0.707,0.268,0.026	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.148:0.856,0.139,0.005	1|1:1.529:0.056,0.359,0.585	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.877:0.346,0.431,0.223	0|0:0.074:0.927,0.071,0.002	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.348:0.683,0.287,0.03	0|0:0:1,0,0	0|1:0.313:0.711,0.264,0.025	0|0:0.362:0.674,0.291,0.036	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.273:0.746,0.234,0.019	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.639:0.041,0.278,0.68	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.018:0.245,0.492,0.263	0|0:0:1,0,0	1|1:1.609:0.04,0.312,0.649	0|0:0.237:0.784,0.196,0.02	0|0:0:1,0,0	0|0:0.265:0.758,0.219,0.023	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.27:0.772,0.185,0.043	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.024:0.115,0.746,0.139	1|1:1.732:0.026,0.215,0.759	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.169:0.841,0.149,0.01	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19426360	SNP-3.19424870.	C	A	.	PASS	AR2=0.957;DR2=0.966;AF=0.285	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.968,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.483:0.586,0.345,0.069	1|1:1.963:0,0.036,0.964	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.839:0.001,0.159,0.84	1|1:1.567:0.046,0.34,0.613	0|1:0.728:0.414,0.443,0.143	0|0:0:1,0,0	1|1:1.131:0.186,0.497,0.317	0|1:1.225:0.151,0.473,0.376	1|1:2:0,0,1	1|0:1.042:0.232,0.495,0.274	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.71:0.02,0.249,0.731	0|1:1.232:0.135,0.497,0.368	1|1:1.365:0.094,0.448,0.459	0|0:0.149:0.874,0.103,0.023	1|1:1.918:0.002,0.078,0.92	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.953,0.045,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.253:0.137,0.473,0.39	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.394:0.054,0.497,0.448	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.172:0.83,0.169,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.953:0,0.047,0.953	1|1:2:0,0,1	0|1:1.107:0.013,0.868,0.119	1|1:2:0,0,1	1|1:1.841:0.005,0.149,0.846	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	1|1:1.751:0.013,0.223,0.764	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.405:0.595,0.405,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.268:0.733,0.267,0.001	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.974:0,0.025,0.975	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	1|1:1.707:0.038,0.217,0.745	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.376:0.624,0.376,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19426735	SNP-3.19425245.	C	A	.	PASS	AR2=0.976;DR2=0.98;AF=0.299	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.815:0.014,0.157,0.829	0|0:0:1,0,0	0|1:1.525:0.075,0.326,0.599	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.263:0.124,0.489,0.387	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1.06:0.233,0.474,0.293	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.549:0.047,0.356,0.597	0|0:0:1,0,0	1|0:1.193:0.161,0.486,0.353	0|0:0:1,0,0	1|1:1.873:0.004,0.118,0.877	0|0:0:1,0,0	1|1:1.089:0.214,0.483,0.303	1|1:2:0,0,1	1|1:1.851:0.002,0.145,0.853	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.947:0,0.053,0.947	1|1:2:0,0,1	1|1:1.972:0.001,0.027,0.973	1|1:2:0,0,1	1|1:1.926:0.001,0.072,0.927	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.865:0.007,0.12,0.873	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.954:0.003,0.041,0.956	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.959:0.001,0.039,0.96	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.217:0.02,0.742,0.238	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.789:0.018,0.174,0.808	1|1:1.911:0.004,0.082,0.915	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19426905	SNP-3.19425415.	C	A	.	PASS	AR2=0.99;DR2=0.992;AF=0.38	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.26:0.749,0.242,0.009	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:1.974:0,0.025,0.974	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.147:0.866,0.12,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.162:0.846,0.146,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.077:0.925,0.072,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.091:0.913,0.084,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.945,0.054,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.94,0.059,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.286:0.737,0.24,0.023	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.912:0.002,0.083,0.914	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.971:0,0.028,0.972	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.951:0.001,0.046,0.953	0|0:0.05:0.952,0.047,0.001	1|1:1.948:0.001,0.051,0.949	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.131:0.877,0.115,0.008	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.11:0.895,0.1,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.253:0.751,0.245,0.004	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.95,0.049,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	19427164	SNP-3.19425674.	A	G	.	PASS	AR2=0.941;DR2=0.955;AF=0.49	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.102:0.194,0.511,0.296	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.107:0.16,0.573,0.267	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.625:0.463,0.448,0.088	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.377:0.664,0.294,0.042	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.076:0.927,0.071,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.311:0.71,0.269,0.021	0|0:0.247:0.776,0.2,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.744:0.022,0.211,0.767	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.666:0.029,0.277,0.694	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.499:0.057,0.386,0.556	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.699:0.026,0.249,0.725	1|1:1.732:0.016,0.236,0.748	1|1:1.416:0.087,0.41,0.503	1|1:1.666:0.024,0.287,0.689	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.362:0.085,0.468,0.447	0|0:0:1,0,0	1|1:1.508:0.052,0.388,0.56	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.449:0.095,0.362,0.544	0|0:0.234:0.767,0.231,0.002	1|1:1.718:0.019,0.244,0.737	1|1:2:0,0,1	1|0:0.744:0.356,0.544,0.1	1|1:2:0,0,1	1|1:1.69:0.019,0.272,0.709	1|1:2:0,0,1	1|1:1.657:0.035,0.274,0.691	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.775:0.012,0.201,0.787	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.098:0.906,0.089,0.004	1|1:2:0,0,1	0|0:0.245:0.771,0.214,0.015	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.911:0.003,0.083,0.914	1|0:0.63:0.478,0.414,0.108	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.73:0.033,0.204,0.763	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.924:0.004,0.069,0.927	1|1:1.961:0.001,0.037,0.962	0|0:0:1,0,0	1|0:1.092:0.21,0.488,0.302	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.132:0.872,0.125,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.893:0.297,0.513,0.19	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.347:0.005,0.642,0.353	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.837:0.009,0.146,0.845	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.135:0.872,0.12,0.007	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.15:0.856,0.137,0.007	1|1:2:0,0,1	0|0:0.3:0.724,0.251,0.024	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.077:0.926,0.071,0.003	0|0:0.189:0.822,0.167,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.812:0.011,0.167,0.823	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.82:0.01,0.16,0.83	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.211:0.802,0.184,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19427190	SNP-3.19425700.	C	A	.	PASS	AR2=0.979;DR2=0.982;AF=0.383	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.423:0.594,0.389,0.017	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.087:0.916,0.082,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.174:0.833,0.16,0.007	0|0:0.106:0.897,0.099,0.004	0|0:0.277:0.747,0.229,0.024	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.07:0.931,0.067,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.195:0.812,0.18,0.008	0|0:0:1,0,0	0|0:0.147:0.857,0.14,0.003	0|0:0:1,0,0	0|0:0.176:0.832,0.159,0.008	0|0:0.117:0.887,0.109,0.004	0|0:0.131:0.874,0.122,0.004	0|0:0.137:0.867,0.13,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.13:0.874,0.122,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.119:0.882,0.118,0.001	0|0:0:1,0,0	0|0:0.096:0.905,0.093,0.001	0|0:0:1,0,0	0|0:0.102:0.901,0.096,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	0|0:0.061:0.94,0.059,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.943,0.056,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.957,0.043,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.971:0,0.029,0.971	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.105:0.037,0.82,0.143	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.713:0.015,0.256,0.729	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.962:0,0.037,0.963	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	1|1:1.988:0,0.011,0.988	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.236:0.808,0.148,0.044	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.106:0.897,0.1,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.199:0.814,0.173,0.013	0|0:0:1,0,0	0|0:0.16:0.849,0.142,0.009	0|0:0:1,0,0	0|0:0.141:0.866,0.126,0.008	0|0:0.209:0.807,0.177,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:1.953:0.001,0.045,0.954	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.991,0.009,0	0|0:0:1,0,0	0|0:0.059:0.943,0.056,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.077:0.925,0.073,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.17:0.841,0.148,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:1.97:0,0.03,0.97	0|0:0:1,0,0
+3	19432253	SNP-3.19430763.	A	G	.	PASS	AR2=0.942;DR2=0.954;AF=0.479	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.162:0.842,0.154,0.004	1|1:2:0,0,1	1|1:1.942:0.002,0.054,0.944	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.958,0.041,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.314:0.133,0.42,0.447	1|1:1.937:0.001,0.061,0.938	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.921:0.002,0.074,0.924	1|1:2:0,0,1	0|0:0.072:0.93,0.068,0.002	1|1:2:0,0,1	1|1:1.737:0.03,0.203,0.767	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.861:0.004,0.131,0.865	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.846:0.006,0.142,0.852	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.942:0,0.058,0.942	1|1:1.482:0.075,0.368,0.557	1|1:1.831:0.01,0.15,0.84	1|1:1.751:0.022,0.206,0.772	1|1:1.84:0.009,0.143,0.849	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.585:0.045,0.325,0.63	1|1:1.734:0.017,0.232,0.751	1|0:1.337:0.095,0.473,0.432	1|1:2:0,0,1	1|1:1.581:0.071,0.278,0.651	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.779:0.016,0.188,0.795	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	1|1:1.968:0,0.031,0.969	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.882:0.123,0.873,0.004	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.687:0.027,0.258,0.715	1|1:1.639:0.012,0.336,0.652	1|1:2:0,0,1	1|1:1.545:0.081,0.292,0.626	1|1:1.579:0.047,0.327,0.626	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.606:0.042,0.31,0.648	1|1:2:0,0,1	1|1:1.593:0.038,0.33,0.631	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.022:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.528:0.066,0.34,0.594	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.977:0,0.022,0.978	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.711:0.026,0.238,0.737	0|0:0.255:0.768,0.21,0.022	1|1:1.595:0.044,0.318,0.638	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.829:0.007,0.156,0.836	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.007,0.992	1|1:2:0,0,1	1|1:1.851:0.008,0.134,0.858	1|1:1.947:0.001,0.051,0.948	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.95:0.003,0.044,0.953	1|1:2:0,0,1	0|0:0.197:0.816,0.171,0.013	1|1:1.728:0.015,0.241,0.743	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.798:0.011,0.18,0.809	1|1:1.775:0.02,0.185,0.795	1|1:1.762:0.014,0.211,0.775	1|1:1.624:0.033,0.31,0.657	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.759:0.244,0.753,0.003	0|0:0:1,0,0	1|1:1.849:0.009,0.134,0.858	0|0:0:1,0,0	1|1:1.74:0.009,0.243,0.748	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.934:0,0.066,0.934	1|1:1.954:0,0.046,0.954	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.831:0.01,0.15,0.841	1|1:1.844:0.008,0.14,0.852	1|1:1.83:0.01,0.15,0.84	1|1:1.847:0.013,0.126,0.861	1|1:1.831:0.01,0.149,0.841	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.885:0.016,0.082,0.902	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.832:0.01,0.148,0.842	0|0:0:1,0,0	1|1:1.549:0.046,0.358,0.595	1|1:2:0,0,1	0|0:0.023:0.978,0.022,0	1|1:1.997:0,0.003,0.997
+3	19434788	SNP-3.19433298.	A	G	.	PASS	AR2=0.949;DR2=0.96;AF=0.296	GT:DS:GP	0|0:0:1,0,0	0|0:0.315:0.727,0.232,0.042	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.932,0.067,0	1|1:2:0,0,1	1|1:1.145:0.167,0.521,0.312	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.831:0.35,0.468,0.182	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.186:0.82,0.175,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.948,0.052,0	0|0:0.028:0.972,0.027,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.031:0.224,0.52,0.255	1|1:2:0,0,1	1|1:1.582:0.043,0.332,0.625	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.663:0.027,0.283,0.69	1|1:2:0,0,1	1|1:1.743:0.014,0.229,0.757	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.801:0.01,0.179,0.811	1|1:2:0,0,1	1|1:1.87:0.005,0.119,0.875	1|1:1.619:0.037,0.307,0.656	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.759:0.023,0.195,0.782	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.814:0.01,0.166,0.824	0|0:0:1,0,0	1|1:1.698:0.015,0.272,0.713	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.771:0.015,0.199,0.786	1|1:1.65:0.05,0.249,0.701	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.36:0.671,0.298,0.031	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.731:0.016,0.238,0.746	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.104:0.896,0.104,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.908:0.004,0.083,0.913	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.561:0.067,0.306,0.628	1|1:1.368:0.12,0.393,0.488	1|1:2:0,0,1	1|1:1.449:0.096,0.358,0.545	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.785:0.015,0.186,0.799	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.812:0.011,0.166,0.823	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.66:0.033,0.273,0.693	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.806:0.011,0.172,0.817	1|1:2:0,0,1	0|0:0.345:0.711,0.233,0.056	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.529:0.036,0.398,0.566	0|0:0:1,0,0
+3	19435700	SNP-3.19434210.	C	A	.	PASS	AR2=0.859;DR2=0.902;AF=0.231	GT:DS:GP	1|0:0.626:0.48,0.413,0.107	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.108:0.895,0.102,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.901:0.328,0.442,0.23	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.357:0.04,0.564,0.396	1|1:2:0,0,1	1|0:0.526:0.515,0.444,0.041	0|0:0.291:0.728,0.254,0.018	0|0:0.446:0.604,0.347,0.05	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.172:0.839,0.15,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.145:0.865,0.125,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.32:0.701,0.278,0.021	1|1:2:0,0,1	0|1:0.697:0.438,0.426,0.135	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.885:0.34,0.435,0.225	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.587:0.069,0.275,0.656	1|0:1.151:0.271,0.306,0.423	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.637:0.051,0.26,0.689	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.182:0.827,0.165,0.008	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.939,0.059,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.175:0.833,0.16,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.139:0.868,0.125,0.007	1|1:2:0,0,1	0|0:0.137:0.868,0.127,0.005	0|0:0.08:0.922,0.075,0.002	0|0:0.192:0.817,0.173,0.01	0|0:0:1,0,0	0|0:0.098:0.904,0.094,0.002	0|0:0.105:0.907,0.081,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.098:0.905,0.093,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.952,0.047,0.001	1|0:1.187:0.135,0.542,0.323	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.519:0.075,0.331,0.594	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.822:0.248,0.683,0.069	0|0:0:1,0,0	1|1:1.33:0.224,0.222,0.554	1|0:0.871:0.343,0.442,0.214	0|0:0.052:0.948,0.051,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.287:0.073,0.566,0.36	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.616:0.502,0.381,0.117	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.618:0.486,0.41,0.104	1|0:1.357:0.109,0.425,0.466	0|0:0:1,0,0	0|0:0.321:0.701,0.277,0.022	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.285:0.736,0.243,0.021	0|0:0:1,0,0	1|0:1.25:0.098,0.554,0.348	0|0:0.446:0.554,0.446,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.472:0.582,0.365,0.053	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.264:0.175,0.385,0.439	0|0:0.633:0.469,0.429,0.102	1|0:0.957:0.234,0.575,0.191	0|1:0.908:0.235,0.622,0.143	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.513:0.567,0.353,0.08	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.328:0.184,0.305,0.511	0|0:0.637:0.466,0.431,0.103	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.19:0.827,0.155,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.375:0.057,0.512,0.432	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.239:0.779,0.202,0.018	0|0:0:1,0,0	0|0:0.097:0.907,0.089,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.108:0.896,0.101,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.08:0.922,0.076,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19435878	SNP-3.19434388.	C	A	.	PASS	AR2=0.978;DR2=0.983;AF=0.345	GT:DS:GP	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.767:0.013,0.207,0.78	1|1:1.538:0.056,0.35,0.594	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.717:0.02,0.243,0.737	0|0:0.046:0.955,0.045,0.001	0|0:0.066:0.935,0.064,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.938,0.061,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.951,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.968,0.031,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.079:0.922,0.078,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.956:0,0.043,0.956	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.96:0.001,0.039,0.96	1|1:2:0,0,1	1|1:1.942:0.001,0.056,0.943	1|1:1.939:0.001,0.059,0.94	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.933:0.001,0.065,0.934	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.973:0,0.027,0.973	0|0:0:1,0,0	1|1:1.884:0.006,0.103,0.891	1|1:1.928:0.001,0.069,0.929	1|1:1.956:0,0.043,0.957	0|0:0:1,0,0	1|1:1.898:0.003,0.095,0.901	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.947:0.001,0.051,0.948	1|1:1.888:0.003,0.106,0.891	1|1:1.942:0.001,0.056,0.943	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0,0.025,0.975	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.983:0,0.016,0.983	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.944,0.055,0.001	0|0:0:1,0,0	0|0:0.092:0.91,0.088,0.002	0|0:0.026:0.974,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.525:0.05,0.374,0.575	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.956,0.043,0.001	0|0:0:1,0,0	0|0:0.061:0.94,0.059,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.575:0.045,0.335,0.62	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.083:0.917,0.082,0.001	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.407:0.096,0.401,0.503	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.957,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.105:0.898,0.098,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19436097	SNP-3.19434607.	C	A	.	PASS	AR2=1;DR2=1;AF=0.354	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0
+3	19437591	SNP-3.19436101.	C	A	.	PASS	AR2=0.995;DR2=0.995;AF=0.344	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.96:0.001,0.038,0.961	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.966:0.001,0.032,0.967	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.955:0.001,0.043,0.956	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.909:0.001,0.09,0.909	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.964:0,0.036,0.964	1|1:2:0,0,1	1|1:1.917:0.001,0.081,0.918	1|1:1.877:0.005,0.112,0.883	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.964:0.001,0.035,0.964	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.958:0,0.042,0.958	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.987:0,0.013,0.987	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:1.958:0.001,0.04,0.959	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.03:0.971,0.028,0.001	0|0:0:1,0,0	1|1:1.943:0.002,0.054,0.944	1|1:1.967:0.001,0.031,0.968	1|1:1.683:0.03,0.258,0.713	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.965:0.001,0.033,0.966	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.967:0,0.032,0.968	0|0:0:1,0,0
+3	19439640	SNP-3.19438150.	C	A	.	PASS	AR2=0.965;DR2=0.976;AF=0.311	GT:DS:GP	0|0:0:1,0,0	1|1:1.808:0.014,0.165,0.822	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.299:0.123,0.454,0.422	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0.007:0.993,0.007,0	0|0:0.02:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1.247:0.138,0.478,0.384	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.755:0.019,0.207,0.774	1|0:1:0,1,0	1|1:1.337:0.116,0.431,0.453	0|1:1.524:0.05,0.377,0.573	1|0:1:0,1,0	1|1:1.661:0.022,0.295,0.683	1|1:2:0,0,1	1|1:1.952:0.001,0.047,0.952	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.36:0.105,0.429,0.466	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.869:0.005,0.121,0.874	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.725:0.01,0.255,0.735	1|1:2:0,0,1	1|1:1.392:0.096,0.417,0.488	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.946:0.001,0.053,0.947	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.88:0.002,0.115,0.883	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.976:0,0.023,0.977	1|1:1.745:0.021,0.214,0.766	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.606:0.552,0.289,0.158	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.971:0,0.028,0.972	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.962:0.001,0.037,0.962	1|1:1.867:0.006,0.121,0.873	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19448247	SNP-3.19446757.	C	A	.	PASS	AR2=0.931;DR2=0.945;AF=0.276	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.697:0.021,0.26,0.719	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.137:0.868,0.127,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.034,0	0|0:0:1,0,0	0|0:0.112:0.893,0.102,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.03:0.159,0.652,0.189	1|1:1.588:0.035,0.341,0.624	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.898:0.001,0.1,0.899	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.746:0.364,0.525,0.111	0|0:0.738:0.401,0.459,0.139	0|1:1.043:0.205,0.546,0.248	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.869:0.008,0.115,0.877	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.69:0.03,0.249,0.721	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.151:0.855,0.14,0.005	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.109:0.13,0.631,0.239	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.494:0.062,0.381,0.556	0|1:0.691:0.412,0.486,0.103	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.799:0.33,0.541,0.129	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.851:0.005,0.138,0.856	1|1:2:0,0,1	1|1:1.444:0.064,0.429,0.508	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.194:0.126,0.555,0.319	1|1:1.411:0.082,0.424,0.493	1|1:2:0,0,1	0|1:1.498:0.033,0.437,0.531	1|1:1.824:0.014,0.148,0.838	0|0:0:1,0,0	1|1:1.778:0.007,0.208,0.785	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.342:0.16,0.339,0.501	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.133:0.205,0.456,0.338	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.584:0.047,0.322,0.631	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.029:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.219:0.185,0.411,0.404	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.425:0.089,0.397,0.514	0|0:0.893:0.317,0.474,0.21	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.081:0.922,0.075,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.752:0.026,0.196,0.778	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.958:0.001,0.041,0.958	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.704:0.026,0.244,0.73	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.735:0.37,0.525,0.105	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19450614	SNP-3.19449124.	A	G	.	PASS	AR2=0.991;DR2=0.993;AF=0.507	GT:DS:GP	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.721:0.013,0.254,0.733	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.823:0.013,0.152,0.835	1|1:1.955:0.001,0.043,0.956	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.907:0.003,0.086,0.91	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.879:0.007,0.107,0.886	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.102:0.068,0.762,0.17	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.961:0.001,0.037,0.962	1|1:1.915:0.002,0.081,0.917	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.478:0.032,0.458,0.51	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.967:0,0.032,0.967	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.853:0.006,0.135,0.859	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.95:0.001,0.049,0.95	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.019,0.98	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.94:0.003,0.054,0.943	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.088:0.913,0.086,0.001	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	19452826	SNP-3.19451336.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.373	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.85:0.028,0.094,0.878	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.357:0.657,0.33,0.013	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.95,0.049,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0.143:0.86,0.137,0.003	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.941:0.001,0.058,0.941	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.942:0.001,0.057,0.943	1|1:1.954:0,0.045,0.954	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.219:0.784,0.213,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.101:0.902,0.095,0.003	0|0:0.037:0.963,0.036,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19452836	SNP-3.19451346.	C	A	.	PASS	AR2=0.975;DR2=0.979;AF=0.346	GT:DS:GP	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.01:0.99,0.01,0	1|1:1.54:0.066,0.329,0.606	1|1:2:0,0,1	1|1:1.804:0.008,0.18,0.812	1|1:2:0,0,1	0|0:0.045:0.956,0.043,0.001	0|0:0.076:0.926,0.072,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.819:0.007,0.167,0.826	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.072:0.93,0.068,0.002	0|0:0:1,0,0	0|0:0.062:0.939,0.061,0.001	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.046:0.955,0.044,0.001	0|0:0.074:0.928,0.071,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.933,0.066,0.001	0|0:0:1,0,0	0|0:0.088:0.914,0.084,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.931,0.067,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.761:0.019,0.201,0.78	1|1:2:0,0,1	1|1:1.753:0.013,0.222,0.766	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.715:0.027,0.231,0.742	1|1:2:0,0,1	1|1:1.72:0.013,0.255,0.732	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.723:0.013,0.251,0.736	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	1|1:1.949:0,0.05,0.949	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.765:0.01,0.214,0.776	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.803:0.009,0.179,0.812	1|1:2:0,0,1	1|1:1.855:0.006,0.132,0.862	1|1:2:0,0,1	1|1:1.807:0.009,0.174,0.816	0|0:0.011:0.99,0.01,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.849:0.006,0.139,0.855	1|1:2:0,0,1	1|1:1.96:0,0.04,0.96	1|0:1:0,1,0	1|1:1.726:0.014,0.247,0.74	1|1:1.974:0,0.025,0.975	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.088:0.912,0.087,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.952,0.047,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0.103:0.9,0.097,0.003	0|0:0:1,0,0	0|0:0.017:0.983,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.909:0.001,0.089,0.91	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.843:0.01,0.138,0.853	0|0:0.034:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.115:0.889,0.108,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	1|1:2:0,0,1	1|1:1.752:0.019,0.209,0.772	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.919:0.003,0.076,0.922	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19453291	SNP-3.19451801.	C	A	.	PASS	AR2=0.947;DR2=0.957;AF=0.31	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.469:0.08,0.372,0.548	1|1:1.866:0.005,0.124,0.871	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.776:0.009,0.206,0.785	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.758:0.017,0.207,0.775	1|1:1.865:0.004,0.128,0.869	0|1:1.142:0.139,0.58,0.281	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.183:0.126,0.565,0.309	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.697:0.431,0.44,0.128	0|1:1.237:0.083,0.597,0.32	0|1:1.216:0.113,0.557,0.33	1|0:1.346:0.052,0.551,0.397	1|1:1.983:0,0.017,0.983	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.922:0.002,0.074,0.924	1|1:1.813:0.011,0.165,0.824	1|1:1.384:0.043,0.529,0.428	0|0:0:1,0,0	1|1:1.778:0.016,0.191,0.793	0|0:0:1,0,0	1|1:1.575:0.057,0.312,0.632	1|1:1.764:0.013,0.21,0.777	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.835:0.007,0.152,0.842	0|0:0:1,0,0	1|1:1.837:0.006,0.152,0.842	1|0:0.716:0.414,0.456,0.13	1|1:1.851:0.007,0.135,0.858	1|1:1.846:0.006,0.143,0.851	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.147:0.129,0.594,0.276	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.755:0.008,0.229,0.763	1|1:1.967:0,0.033,0.967	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.601:0.046,0.307,0.647	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.917:0.002,0.079,0.919	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.887:0.004,0.106,0.89	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.782:0.01,0.199,0.791	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.211:0.075,0.639,0.286	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.877:0.004,0.115,0.881	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.368:0.061,0.511,0.429	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.59:0.057,0.295,0.648	0|0:0:1,0,0	1|1:1.963:0.001,0.035,0.964	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.8:0.012,0.177,0.812	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.775:0.014,0.197,0.789	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.662:0.034,0.271,0.695	0|0:0:1,0,0
+3	19453506	SNP-3.19452016.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.485	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.023:0.977,0.023,0	0|0:0.065:0.937,0.061,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.941,0.059,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19454317	SNP-3.19452827.	C	A	.	PASS	AR2=0.989;DR2=0.991;AF=0.321	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.889:0.003,0.105,0.892	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.955,0.042,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.944:0.001,0.055,0.945	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.2:0.8,0.2,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.91:0.001,0.088,0.911	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.93:0.001,0.067,0.932	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.928:0.107,0.858,0.035	1|1:1.586:0.126,0.162,0.712	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.966:0,0.034,0.966	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.809:0.012,0.166,0.822	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.892:0.002,0.104,0.894	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.182:0.044,0.73,0.226	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.818:0.012,0.159,0.83	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19454570	SNP-3.19453080.	A	G	.	PASS	AR2=0.984;DR2=0.988;AF=0.223	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.782:0.012,0.194,0.794	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.717:0.02,0.242,0.737	1|1:1.637:0.038,0.288,0.674	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.595:0.045,0.316,0.64	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.537:0.05,0.362,0.588	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.859:0.008,0.125,0.867	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.73:0.031,0.208,0.761	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.934:0.002,0.062,0.936	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19458144	SNP-3.19456654.	C	A	.	PASS	AR2=1;DR2=1;AF=0.366	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19458371	SNP-3.19456881.	C	A	.	PASS	AR2=1;DR2=1;AF=0.358	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.956,0.044,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.016,0.983	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19459022	SNP-3.19457532.	A	G	.	PASS	AR2=0.955;DR2=0.963;AF=0.481	GT:DS:GP	1|1:1.794:0.012,0.183,0.805	0|0:0:1,0,0	1|1:1.858:0.007,0.128,0.865	0|0:0:1,0,0	1|1:1.879:0.003,0.115,0.882	1|1:2:0,0,1	1|1:1.819:0.009,0.164,0.827	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.816:0.009,0.165,0.826	1|1:1.775:0.012,0.2,0.788	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.754:0.026,0.194,0.78	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.371:0.088,0.453,0.459	1|1:2:0,0,1	1|1:1.824:0.008,0.16,0.832	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.756:0.019,0.206,0.775	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.796:0.01,0.184,0.806	1|1:1.784:0.008,0.2,0.792	1|1:1.873:0.005,0.118,0.877	1|1:1.771:0.012,0.206,0.782	1|1:2:0,0,1	1|1:1.833:0.007,0.153,0.84	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.814:0.013,0.16,0.827	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.773:0.014,0.199,0.787	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.172:0.837,0.153,0.01	1|1:2:0,0,1	1|1:1.858:0.006,0.13,0.864	1|1:2:0,0,1	0|0:0.425:0.604,0.368,0.028	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.851:0.008,0.134,0.859	1|1:1.914:0.002,0.082,0.916	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.811:0.008,0.173,0.819	1|1:1.778:0.019,0.184,0.797	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.871:0.148,0.832,0.019	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.423:0.057,0.463,0.48	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.965:0.06,0.914,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.98,0.019,0.001	0|0:0:1,0,0	1|1:1.786:0.013,0.188,0.799	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.955,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.159:0.843,0.155,0.002	1|1:1.795:0.012,0.18,0.808	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.812:0.014,0.161,0.825	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.966:0,0.034,0.966	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.865:0.006,0.124,0.871	1|1:1.909:0.002,0.087,0.911	0|0:0:1,0,0	1|1:1.981:0,0.019,0.981	1|1:1.866:0.006,0.122,0.872	1|1:1.819:0.008,0.164,0.828	1|1:2:0,0,1	1|1:1.878:0.005,0.112,0.883	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.054:0.948,0.051,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.93:0.002,0.065,0.932	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.841:0.006,0.148,0.846	1|1:1.814:0.009,0.167,0.823	1|1:1.983:0,0.017,0.983	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.757:0.024,0.195,0.781	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.862:0.007,0.123,0.869	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.774:0.015,0.197,0.788	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.741:0.034,0.19,0.776	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.806:0.013,0.168,0.819	1|1:1.816:0.013,0.158,0.829	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.59:0.035,0.34,0.625	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.494:0.087,0.333,0.581	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.91:0.001,0.088,0.911	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.807:0.013,0.168,0.82	0|0:0:1,0,0	1|1:2:0,0,1
+3	19459428	SNP-3.19457938.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.33	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.938:0.001,0.061,0.938	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.864:0.005,0.125,0.87	0|0:0:1,0,0
+3	19459557	SNP-3.19458067.	A	G	.	PASS	AR2=0.989;DR2=0.991;AF=0.344	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.43:0.594,0.381,0.024	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.937,0.061,0.001	1|1:2:0,0,1	0|0:0.356:0.656,0.333,0.012	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.97:0.153,0.724,0.123	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.906,0.092,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.975,0.025,0	0|0:0.006:0.995,0.005,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.265:0.735,0.265,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.995:0.005,0.995,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0.015:0.985,0.015,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.012:0.988,0.011,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0.011:0.989,0.01,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0.038:0.963,0.037,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.435:0.627,0.312,0.061	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0.074:0.928,0.071,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.012:0.988,0.012,0	1|1:2:0,0,1
+3	19459649	SNP-3.19458159.	C	A	.	PASS	AR2=0.997;DR2=0.998;AF=0.335	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.019:0.012,0.956,0.032	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1.043:0.004,0.949,0.047	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.457:0.55,0.443,0.007	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.938:0,0.062,0.938	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.902:0,0.098,0.902	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19460831	SNP-3.19459341.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.358	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.019:0.981,0.019,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0.041:0.959,0.041,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19461049	SNP-3.19459559.	A	G	.	PASS	AR2=0.996;DR2=0.997;AF=0.279	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.946,0.053,0.001	0|0:0:1,0,0	0|0:0.055:0.947,0.052,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.085:0.919,0.077,0.004	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.148:0.857,0.138,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.035:0.004,0.957,0.039	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.99,0.01,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.067:0.934,0.065,0.001	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.116:0.889,0.107,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.943,0.056,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19462836	SNP-3.19461346.	C	A	.	PASS	AR2=1;DR2=1;AF=0.467	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19463025	SNP-3.19461535.	C	A	.	PASS	AR2=1;DR2=1;AF=0.358	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19463104	SNP-3.19461614.	A	G	.	PASS	AR2=1;DR2=1;AF=0.284	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	19476117	SNP-3.19474627.	C	A	.	PASS	AR2=1;DR2=1;AF=0.465	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19477391	SNP-3.19475901.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.263	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.165:0.842,0.152,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.031:0.969,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19478609	SNP-3.19477119.	C	A	.	PASS	AR2=0.982;DR2=0.985;AF=0.379	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	1|1:1.967:0,0.032,0.968	1|1:1.953:0,0.046,0.953	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.952,0.046,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.117:0.886,0.11,0.003	0|0:0:1,0,0	0|0:0.124:0.879,0.118,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.099:0.905,0.092,0.004	0|0:0:1,0,0	0|0:0.046:0.954,0.045,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.162:0.842,0.154,0.004	0|0:0:1,0,0	0|0:0.276:0.754,0.217,0.03	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.672:0.523,0.283,0.194	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.951,0.049,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.101:0.903,0.093,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.967:0,0.033,0.967	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.966:0,0.034,0.966	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:1.959:0.001,0.04,0.959	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.926:0.002,0.071,0.928	0|0:0.05:0.952,0.046,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.953:0,0.046,0.953	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.97:0,0.03,0.97	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.088:0.914,0.084,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.087:0.917,0.08,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.963:0,0.036,0.964	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.123:0.881,0.114,0.004	0|0:0.078:0.924,0.074,0.002	0|0:0.172:0.837,0.155,0.008	0|0:0.13:0.877,0.116,0.007	0|0:0.117:0.887,0.109,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.951,0.048,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.149:0.858,0.135,0.007	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.114:0.89,0.105,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.96:0,0.039,0.96	0|0:0:1,0,0	0|0:0.094:0.909,0.087,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.038:0.963,0.035,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.075:0.93,0.064,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.934,0.064,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.071:0.932,0.065,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.935:0.001,0.063,0.936	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19480097	SNP-3.19478607.	C	A	.	PASS	AR2=0.995;DR2=0.996;AF=0.393	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.361:0.669,0.301,0.03	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.075:0.926,0.073,0.001	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.957,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.192:0.815,0.177,0.008	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.127:0.876,0.121,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.075:0.928,0.07,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.115:0.892,0.102,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.101:0.9,0.1,0.001	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19482708	SNP-3.19481218.	A	G	.	PASS	AR2=0.934;DR2=0.954;AF=0.447	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.472:0.039,0.45,0.511	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.457:0.075,0.392,0.532	1|1:1.511:0.045,0.399,0.556	1|1:1.505:0.063,0.37,0.568	1|1:1.559:0.05,0.342,0.609	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.507:0.061,0.371,0.568	1|1:2:0,0,1	1|1:1.44:0.079,0.401,0.52	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.671:0.043,0.243,0.714	1|1:1.504:0.063,0.371,0.566	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.755:0.017,0.212,0.771	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.869:0.005,0.121,0.874	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.762:0.015,0.208,0.777	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.789:0.011,0.19,0.799	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.813:0.008,0.171,0.821	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.5:0.064,0.373,0.563	1|1:2:0,0,1	1|1:1.859:0.006,0.129,0.865	0|0:0:1,0,0	1|1:1.66:0.044,0.253,0.703	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.517:0.06,0.362,0.578	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.543:0.057,0.344,0.599	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.868:0.002,0.128,0.87	1|1:2:0,0,1	1|1:1.502:0.067,0.365,0.569	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.873:0.006,0.115,0.879	1|1:1.845:0.005,0.144,0.851	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.551:0.051,0.347,0.602	0|0:0:1,0,0	1|1:1.732:0.025,0.219,0.757	1|1:2:0,0,1	1|0:1.287:0.112,0.488,0.4	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.807:0.023,0.146,0.83	1|1:1.723:0.039,0.2,0.762	0|0:0:1,0,0	1|1:1.933:0.001,0.064,0.935	1|1:1.424:0.083,0.409,0.508	1|1:1.417:0.086,0.412,0.503	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1.502:0.06,0.377,0.562	1|1:2:0,0,1	1|1:1.426:0.083,0.408,0.509	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.196:0.221,0.362,0.417	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19483515	SNP-3.19482025.	C	A	.	PASS	AR2=0.98;DR2=0.984;AF=0.308	GT:DS:GP	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.866:0.004,0.126,0.87	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.925:0,0.075,0.925	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.91:0.001,0.088,0.911	1|1:2:0,0,1	1|1:1.822:0,0.178,0.822	1|1:1.804:0.001,0.194,0.805	1|0:1:0,1,0	1|1:1.792:0.007,0.195,0.798	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.609:0.045,0.301,0.654	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.277:0.124,0.474,0.401	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.776:0.013,0.199,0.788	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.828:0.008,0.156,0.836	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.578:0.039,0.343,0.618	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.904:0.004,0.088,0.908	1|1:1.898:0.004,0.094,0.902	1|1:2:0,0,1	1|1:1.814:0.015,0.156,0.829	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.948:0.003,0.045,0.951	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.93:0.004,0.063,0.933	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.452:0.087,0.373,0.539	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19483872	SNP-3.19482382.	C	A	.	PASS	AR2=1;DR2=1;AF=0.356	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19483955	SNP-3.19482465.	A	G	.	PASS	AR2=0.996;DR2=0.997;AF=0.279	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.954:0.082,0.883,0.036	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.371:0.65,0.33,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.211:0.803,0.184,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1
+3	19484593	SNP-3.19483103.	C	A	.	PASS	AR2=0.993;DR2=0.994;AF=0.376	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.039:0.962,0.038,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.959,0.04,0	0|0:0:1,0,0	0|0:0.083:0.917,0.083,0	0|0:0.018:0.982,0.018,0	0|0:0.036:0.965,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.013,0	0|0:0:1,0,0	0|0:0.046:0.954,0.046,0	0|0:0.037:0.963,0.037,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0.056:0.946,0.052,0.002	0|0:0:1,0,0	0|0:0.051:0.95,0.049,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.029:0.972,0.027,0.001	0|0:0.021:0.979,0.021,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.96,0.04,0.001	0|0:0.034:0.967,0.033,0	0|0:0:1,0,0	0|0:0.04:0.961,0.039,0.001	0|0:0.006:0.994,0.006,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.018:0.983,0.017,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.085:0.917,0.081,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.027,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.345:0.78,0.096,0.125	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.036:0.965,0.034,0.001	0|0:0.028:0.972,0.027,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.03:0.97,0.029,0
+3	19485735	SNP-3.19484245.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.362	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.947:0,0.053,0.947	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.041:0.96,0.04,0.001	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.952,0.047,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19486781	SNP-3.19485291.	C	A	.	PASS	AR2=0.991;DR2=0.994;AF=0.476	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.094:0.908,0.09,0.002	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.102:0.901,0.097,0.003	0|0:0:1,0,0	0|0:0.112:0.891,0.106,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.151:0.854,0.141,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.582:0.015,0.388,0.597	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.685:0,0.314,0.686	0|1:1.551:0.001,0.447,0.552	1|1:2:0,0,1	0|1:1.632:0,0.368,0.632	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.859:0.003,0.135,0.862	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19488301	SNP-3.19486811.	A	G	.	PASS	AR2=0.997;DR2=0.998;AF=0.533	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.905:0.009,0.077,0.914	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.247:0.034,0.685,0.281	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.958:0,0.042,0.958	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.959:0,0.041,0.959	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.822:0,0.178,0.822	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	19488438	SNP-3.19486948.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.205	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.121:0.882,0.115,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.045:0.955,0.044,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19488488	SNP-3.19486998.	C	A	.	PASS	AR2=0.983;DR2=0.985;AF=0.319	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.865:0.005,0.124,0.87	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.835:0.008,0.15,0.842	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:0.754:0.257,0.733,0.01	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.878:0.004,0.115,0.881	0|1:1:0,1,0	1|1:1.804:0.011,0.173,0.816	1|0:1.124:0.075,0.726,0.199	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.943:0.001,0.056,0.944	1|1:2:0,0,1	1|1:1.8:0.011,0.178,0.811	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.781:0.012,0.196,0.792	0|0:0:1,0,0	1|1:1.844:0.007,0.142,0.851	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.833:0.007,0.153,0.84	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.818:0.008,0.167,0.825	1|1:1.89:0.003,0.105,0.893	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.878:0.003,0.115,0.881	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.798:0.01,0.181,0.808	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.81:0.011,0.168,0.821	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.852:0.005,0.138,0.857	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.844:0.005,0.145,0.849	1|1:1.853:0.007,0.134,0.86	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.836:0.008,0.148,0.844	0|0:0:1,0,0
+3	19490479	SNP-3.19488989.	C	A	.	PASS	AR2=0.954;DR2=0.962;AF=0.433	GT:DS:GP	0|0:0.104:0.899,0.098,0.003	1|1:2:0,0,1	0|0:0.299:0.745,0.211,0.044	1|1:2:0,0,1	0|0:0.19:0.816,0.178,0.006	0|0:0.088:0.922,0.068,0.01	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.227:0.79,0.194,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.283:0.734,0.248,0.017	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.981:0,0.018,0.982	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.198:0.811,0.179,0.01	0|0:0.189:0.82,0.172,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.261:0.762,0.216,0.023	0|0:0.409:0.634,0.322,0.043	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.606:0.48,0.433,0.087	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.119:0.885,0.112,0.004	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.043:0.959,0.04,0.002	0|0:0.152:0.855,0.137,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.302:0.715,0.267,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.161:0.844,0.15,0.005	0|0:0.162:0.851,0.135,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.209:0.803,0.185,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.995:0.072,0.862,0.066	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0,0.025,0.975	0|0:0.153:0.872,0.103,0.025	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	1|1:1.974:0,0.025,0.975	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.956:0,0.043,0.957	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.956,0.042,0.001	0|0:0:1,0,0	1|0:0.867:0.338,0.457,0.205	0|0:0:1,0,0	0|0:0.319:0.698,0.284,0.017	0|0:0.032:0.969,0.03,0.001	0|0:1.051:0.211,0.527,0.262	0|0:0:1,0,0	1|1:1.979:0,0.021,0.979	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.301:0.731,0.236,0.033	0|0:0.066:0.936,0.063,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.215:0.797,0.191,0.012	0|0:0:1,0,0	0|0:0.14:0.867,0.125,0.007	0|0:0.093:0.91,0.087,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.195:0.097,0.611,0.292	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.145:0.862,0.131,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.334:0.69,0.286,0.024	1|1:1.956:0.001,0.043,0.957	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.171:0.837,0.154,0.009	0|0:0:1,0,0	0|0:0.293:0.75,0.206,0.043	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.105:0.899,0.098,0.004	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.103:0.9,0.096,0.004	0|0:0:1,0,0	0|0:0.189:0.821,0.169,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.39:0.65,0.311,0.039	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.399:0.641,0.319,0.04	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.403:0.637,0.323,0.04	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.19:0.82,0.17,0.01	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.389:0.65,0.31,0.04	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19491182	SNP-3.19489692.	A	G	.	PASS	AR2=0.962;DR2=0.972;AF=0.257	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.931,0.068,0.001	0|0:0:1,0,0	1|1:1.837:0.005,0.153,0.842	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.075:0.927,0.072,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.945,0.051,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.701:0.014,0.271,0.715	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.115:0.885,0.115,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.604:0.031,0.333,0.636	1|1:2:0,0,1	1|0:1.181:0.144,0.532,0.325	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|1:1:0,1,0	1|1:1.936:0.001,0.062,0.937	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:1.678:0.034,0.254,0.712	1|1:1.97:0.001,0.028,0.971	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.575:0.446,0.533,0.021	0|0:0.117:0.888,0.107,0.005	0|0:0.371:0.641,0.347,0.012	0|0:0.526:0.502,0.469,0.028	0|0:0.48:0.529,0.461,0.009	1|0:0.524:0.483,0.509,0.008	0|0:0.417:0.585,0.414,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.223:0.11,0.558,0.332	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.823:0.008,0.162,0.83	0|0:0:1,0,0	0|0:0.105:0.9,0.095,0.005	0|0:0.064:0.937,0.063,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.072:0.933,0.062,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.989:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.924:0.002,0.073,0.925	1|1:1.885:0.004,0.106,0.89	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.905:0.001,0.092,0.907	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.057:0.944,0.055,0.001	0|0:0:1,0,0	0|0:0.069:0.932,0.068,0.001	1|1:1.982:0,0.018,0.982	0|0:0.025:0.975,0.024,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.958:0.002,0.039,0.959	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.885:0.003,0.109,0.888	1|1:2:0,0,1	1|1:1.71:0.019,0.252,0.729	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.019,0.001	0|0:0:1,0,0	1|1:2:0,0,1
+3	19491464	SNP-3.19489974.	C	A	.	PASS	AR2=1;DR2=1;AF=0.36	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.992,0.008,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19491625	SNP-3.19490135.	C	A	.	PASS	AR2=0.913;DR2=0.942;AF=0.324	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.479:0.589,0.344,0.067	1|1:1.899:0.004,0.092,0.903	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.08:0.306,0.309,0.385	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.574:0.517,0.392,0.091	0|1:0.639:0.45,0.46,0.09	1|1:2:0,0,1	0|1:0.862:0.295,0.548,0.157	0|0:0:1,0,0	1|0:0.652:0.467,0.414,0.119	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.295:0.739,0.227,0.034	1|1:2:0,0,1	1|0:0.82:0.226,0.729,0.045	1|1:2:0,0,1	1|1:1.664:0.035,0.267,0.698	1|1:1.452:0.068,0.412,0.52	0|0:0:1,0,0	1|0:0.829:0.343,0.485,0.172	1|1:1.947:0,0.053,0.947	1|1:2:0,0,1	1|0:0.627:0.461,0.451,0.088	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.245:0.1,0.555,0.345	1|1:2:0,0,1	0|0:0.526:0.5,0.475,0.025	1|0:0.568:0.531,0.369,0.1	0|0:0:1,0,0	0|0:0.503:0.555,0.388,0.058	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.802:0.351,0.495,0.154	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.198:0.815,0.173,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.732:0.427,0.413,0.16	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.553:0.527,0.394,0.08	1|1:1.193:0.263,0.28,0.456	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.449:0.639,0.274,0.088	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.738:0.408,0.445,0.146	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.169:0.84,0.151,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.661:0.458,0.423,0.119	0|1:0.812:0.267,0.655,0.078	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.085:0.918,0.078,0.004	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.766:0.388,0.458,0.154	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.595:0.046,0.312,0.642	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.557:0.045,0.354,0.601	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.445:0.594,0.366,0.04	1|1:2:0,0,1
+3	19497929	SNP-3.19496439.	C	A	.	PASS	AR2=0.973;DR2=0.979;AF=0.418	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.018:0.982,0.018,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.268:0.751,0.231,0.019	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.483:0.546,0.425,0.029	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.225:0.788,0.199,0.013	0|0:0.219:0.793,0.195,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.518:0.589,0.304,0.107	0|0:0:1,0,0	0|0:0.114:0.891,0.105,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.124:0.204,0.467,0.329	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.147:0.859,0.135,0.006	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	0|0:0.142:0.861,0.136,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.091:0.006,0.896,0.098	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.146:0.862,0.13,0.008	1|1:2:0,0,1	1|1:1.987:0,0.012,0.987	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.233:0.779,0.21,0.011	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.197:0.809,0.186,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.092:0.919,0.071,0.01	0|0:0:1,0,0	1|1:1.289:0.152,0.406,0.441	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.169:0.841,0.149,0.01	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.752:0.305,0.639,0.056	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.193:0.819,0.17,0.011	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0.16:0.846,0.148,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.151:0.853,0.142,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.012,0.987	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.954,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.033:0.967,0.032,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.919:0.233,0.615,0.152	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19508441	SNP-3.19506951.	C	A	.	PASS	AR2=0.937;DR2=0.953;AF=0.293	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.089:0.918,0.075,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.419:0.039,0.503,0.458	1|1:2:0,0,1	1|0:1.296:0.092,0.519,0.389	1|1:1.693:0.002,0.303,0.695	1|0:0.796:0.359,0.487,0.154	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.977:0,0.023,0.977	1|0:0.803:0.366,0.466,0.168	0|0:0:1,0,0	0|0:0.48:0.582,0.355,0.062	0|0:0.566:0.509,0.415,0.076	0|1:1.158:0.122,0.597,0.28	0|1:1.015:0.186,0.614,0.2	1|0:0.993:0.18,0.646,0.174	1|1:2:0,0,1	1|1:1.98:0,0.019,0.98	1|1:1.983:0,0.017,0.983	1|1:2:0,0,1	1|1:1.843:0.012,0.134,0.855	0|0:0:1,0,0	0|1:1.414:0.093,0.4,0.507	0|0:0:1,0,0	1|1:1.773:0.015,0.196,0.789	0|0:0:1,0,0	1|1:1.755:0.017,0.211,0.772	1|1:2:0,0,1	0|1:1.499:0.04,0.422,0.539	0|0:0:1,0,0	0|1:1.612:0.025,0.339,0.637	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.32:0.024,0.631,0.344	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.485:0.053,0.409,0.538	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.85:0.002,0.147,0.851	1|1:1.965:0,0.035,0.965	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.754:0.004,0.238,0.758	1|1:1.819:0.008,0.165,0.827	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.779:0.013,0.194,0.793	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.917:0.001,0.082,0.917	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.206:0.18,0.433,0.387	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.78:0.015,0.19,0.795	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.289:0.078,0.555,0.367	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0	1|1:1.333:0.151,0.364,0.485	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.935:0.002,0.062,0.937	1|1:1.973:0,0.026,0.974	1|1:1.77:0.063,0.104,0.833	1|1:1.939:0.002,0.058,0.94	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.353:0.117,0.414,0.47	0|0:0:1,0,0
+3	19511582	SNP-3.19510092.	A	G	.	PASS	AR2=0.883;DR2=0.912;AF=0.207	GT:DS:GP	0|0:0.841:0.338,0.483,0.179	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.88:0.212,0.696,0.092	0|0:0:1,0,0	0|0:0.652:0.464,0.42,0.116	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.687:0.428,0.457,0.115	1|1:2:0,0,1	0|1:0.899:0.282,0.537,0.181	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.296:0.732,0.239,0.028	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.287:0.756,0.202,0.042	0|0:0.65:0.449,0.452,0.099	0|0:0.069:0.932,0.067,0.001	0|0:0.5:0.654,0.193,0.153	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.452:0.593,0.362,0.045	1|1:2:0,0,1	0|1:0.477:0.552,0.419,0.029	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.673:0.438,0.451,0.111	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.579:0.515,0.39,0.095	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.802:0.011,0.176,0.813	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.743:0.394,0.468,0.137	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.48:0.561,0.399,0.041	0|0:0.065:0.935,0.065,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.944,0.056,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.948,0.051,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.954,0.046,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.074:0.926,0.074,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.752:0.373,0.502,0.125	1|0:1.107:0.214,0.465,0.321	1|1:1.107:0.284,0.326,0.39	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.045:0.956,0.044,0.001	0|0:0:1,0,0	0|0:0.048:0.953,0.047,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.429:0.638,0.296,0.067	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.631:0.485,0.399,0.116	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.445:0.584,0.387,0.029	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|1:0.971:0.269,0.49,0.241	1|0:0.497:0.538,0.428,0.035	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.414:0.634,0.318,0.048	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.096:0.22,0.464,0.316	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.222:0.794,0.191,0.015	0|0:0:1,0,0	0|0:0.285:0.752,0.212,0.037	0|0:0.768:0.388,0.455,0.157	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.697:0.411,0.48,0.109	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.836:0.356,0.451,0.193	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.025:0.247,0.481,0.272	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.833:0.003,0.161,0.836	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	19516921	SNP-3.19515431.	C	A	.	PASS	AR2=0.94;DR2=0.956;AF=0.376	GT:DS:GP	0|0:0.286:0.736,0.242,0.022	1|1:2:0,0,1	0|0:0.105:0.9,0.095,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.543:0.036,0.385,0.579	0|0:0:1,0,0	0|0:0.48:0.581,0.357,0.061	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.215:0.795,0.195,0.01	0|0:0.123:0.881,0.115,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.161:0.846,0.146,0.008	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.597:0.52,0.363,0.117	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.384:0.649,0.317,0.033	0|0:0.077:0.924,0.074,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.157:0.851,0.141,0.008	0|0:0:1,0,0	0|0:0.488:0.555,0.403,0.043	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.96:0,0.039,0.961	1|1:1.826:0.013,0.148,0.839	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.701:0.026,0.246,0.728	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.407:0.059,0.474,0.467	1|1:1.67:0.01,0.309,0.68	1|1:1.846:0.01,0.135,0.855	1|1:1.678:0.034,0.255,0.711	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.652:0.026,0.295,0.678	1|1:2:0,0,1	1|1:1.777:0.015,0.192,0.793	0|1:1.133:0.002,0.862,0.136	1|1:1.965:0.001,0.034,0.966	0|1:1.552:0.021,0.406,0.573	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.389:0.656,0.3,0.045	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.927:0,0.072,0.927	1|1:1.896:0.005,0.095,0.901	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.072:0.932,0.064,0.004	1|1:1.529:0.039,0.392,0.569	1|1:2:0,0,1	1|1:1.635:0.022,0.321,0.657	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.821:0.022,0.135,0.843	1|1:2:0,0,1	1|1:1.884:0.001,0.113,0.885	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.584:0.027,0.362,0.611	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.032,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.422:0.101,0.376,0.523	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.832:0.008,0.152,0.84	0|0:0:1,0,0	0|0:0.208:0.806,0.179,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.197:0.814,0.175,0.011	1|1:1.662:0.045,0.247,0.708	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.809:0.004,0.184,0.812	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.496:0.049,0.407,0.544	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.17:0.842,0.145,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.017:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.126:0.882,0.11,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.578:0.063,0.295,0.641	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.547:0.076,0.302,0.622	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.808:0.007,0.177,0.816	0|0:0:1,0,0
+3	19517647	SNP-3.19516157.	C	A	.	PASS	AR2=0.997;DR2=0.997;AF=0.371	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.072:0.93,0.068,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.024:0.977,0.022,0.001	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.243:0.758,0.242,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.148:0.857,0.138,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.107:0.895,0.102,0.003	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.96,0.039,0.001	0|0:0.011:0.989,0.011,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19517760	SNP-3.19516270.	C	A	.	PASS	AR2=0.991;DR2=0.993;AF=0.331	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.538:0.045,0.371,0.583	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.823:0.007,0.163,0.83	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.868:0.003,0.125,0.872	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.795:0.013,0.178,0.808	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.898:0.003,0.097,0.901	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.821:0.008,0.164,0.829	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.873:0.004,0.118,0.878	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.949:0.001,0.049,0.95	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.806:0.009,0.176,0.815	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.961:0.001,0.037,0.962	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.84:0.006,0.148,0.846	0|0:0:1,0,0
+3	19518179	SNP-3.19516689.	C	A	.	PASS	AR2=0.98;DR2=0.986;AF=0.354	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.153:0.855,0.137,0.008	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.053:0.314,0.318,0.367	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.829:0.009,0.153,0.838	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.922,0.075,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.119:0.881,0.119,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.703:0.019,0.26,0.722	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.713:0.02,0.247,0.733	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.876:0.002,0.119,0.879	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.668:0.028,0.277,0.696	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.749:0.013,0.224,0.763	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.134:0.871,0.124,0.005	0|0:0:1,0,0	0|0:0.138:0.867,0.128,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.653:0.05,0.248,0.703	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.027:0.974,0.025,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19518782	SNP-3.19517292.	A	G	.	PASS	AR2=0.991;DR2=0.993;AF=0.246	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.837:0.009,0.144,0.847	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.703:0.021,0.255,0.724	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1.156:0.006,0.832,0.162	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.726:0.018,0.239,0.744	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.135:0.871,0.124,0.006	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.733:0.023,0.221,0.756	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19525732	SNP-3.19524242.	C	A	.	PASS	AR2=0.993;DR2=0.994;AF=0.353	GT:DS:GP	0|0:0:1,0,0	1|1:1.932:0.001,0.065,0.934	0|0:0.009:0.991,0.009,0	1|1:1.836:0.011,0.141,0.848	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.931:0.001,0.067,0.932	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.954,0.045,0.001	0|0:0:1,0,0	0|0:0.042:0.959,0.04,0.001	0|0:0.042:0.958,0.041,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.951,0.049,0.001	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.05:0.95,0.049,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.916:0.002,0.08,0.918	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.914:0.002,0.083,0.916	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.953:0.001,0.045,0.954	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.971:0,0.029,0.971	1|1:2:0,0,1	1|1:1.956:0.001,0.043,0.956	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.899:0.002,0.098,0.901	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.946:0.001,0.052,0.947	0|0:0:1,0,0	1|1:1.927:0.001,0.07,0.929	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.917:0.001,0.081,0.918	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.941:0.001,0.058,0.942	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.061:0.94,0.059,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	1|1:1.926:0.002,0.07,0.928	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.968:0.001,0.03,0.969	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	19526547	SNP-3.19525057.	A	G	.	PASS	AR2=0.973;DR2=0.98;AF=0.466	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.576:0.044,0.335,0.621	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.741:0.018,0.224,0.759	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.625:0.031,0.312,0.656	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.031:0.97,0.029,0.001	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.507:0.032,0.429,0.539	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.775:0.014,0.198,0.788	1|1:1.808:0.009,0.173,0.817	1|1:2:0,0,1	1|1:1.717:0.02,0.243,0.737	1|1:1.69:0.022,0.266,0.712	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.335:0.089,0.487,0.424	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.745:0.019,0.217,0.764	0|0:0:1,0,0	1|1:1.738:0.019,0.223,0.758	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.711:0.026,0.238,0.736	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.677:0.023,0.277,0.7	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.693:0.028,0.251,0.721	1|1:2:0,0,1	1|1:1.645:0.026,0.303,0.671	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.887:0.005,0.102,0.893	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.887:0.005,0.102,0.892	1|1:2:0,0,1	1|1:1.807:0.01,0.174,0.816	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.682:0.026,0.266,0.708	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	19526749	SNP-3.19525259.	C	A	.	PASS	AR2=0.985;DR2=0.987;AF=0.39	GT:DS:GP	0|0:0.08:0.922,0.076,0.002	1|1:1.941:0.002,0.055,0.943	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.364:0.669,0.297,0.033	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.121:0.883,0.113,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.941,0.058,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.962,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.093:0.91,0.088,0.003	0|0:0.047:0.954,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.954,0.045,0	0|0:0:1,0,0	0|0:0.06:0.94,0.059,0	0|0:0.041:0.96,0.039,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.968:0,0.031,0.969	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.981:0,0.018,0.981	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.952:0.001,0.045,0.953	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.959:0,0.041,0.959	1|1:2:0,0,1	1|1:1.964:0,0.035,0.965	1|1:1.975:0,0.025,0.975	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.98:0,0.019,0.98	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.974:0,0.026,0.974	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.098:0.905,0.092,0.003	0|0:0:1,0,0	0|0:0.153:0.867,0.113,0.02	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.953:0,0.046,0.953	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.348:0.683,0.286,0.031	0|0:0.161:0.842,0.155,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.245:0.768,0.22,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.116:0.89,0.104,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.179:0.826,0.169,0.005	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.088:0.914,0.084,0.002	1|1:2:0,0,1	0|0:0.044:0.956,0.044,0	1|1:2:0,0,1	0|0:0.102:0.903,0.092,0.005	0|0:0.071:0.931,0.067,0.002	0|0:0.006:0.994,0.006,0	0|0:0.098:0.903,0.096,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.292:0.751,0.206,0.043	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19529334	SNP-3.19527844.	A	G	.	PASS	AR2=1;DR2=1;AF=0.251	GT:DS:GP	1|1:1.983:0,0.016,0.984	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19530150	SNP-3.19528660.	C	A	.	PASS	AR2=0.996;DR2=0.998;AF=0.471	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.276:0.169,0.387,0.444	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19530426	SNP-3.19528936.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.377	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.097:0.905,0.092,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.965,0.034,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.953,0.047,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.951,0.049,0.001	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0.049:0.952,0.048,0.001	0|0:0.04:0.96,0.039,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.038:0.962,0.038,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.674:0.358,0.611,0.032	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.104:0.899,0.098,0.003	0|0:0:1,0,0	0|0:0.108:0.895,0.102,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.954,0.045,0.002	0|0:0.043:0.957,0.042,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.054:0.947,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.105:0.898,0.099,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.104:0.896,0.104,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19531487	SNP-3.19529997.	A	G	.	PASS	AR2=1;DR2=1;AF=0.253	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.98:0.023,0.975,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19531818	SNP-3.19530328.	C	A	.	PASS	AR2=1;DR2=1;AF=0.467	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.001:0,0.999,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19532303	SNP-3.19530813.	A	G	.	PASS	AR2=0.999;DR2=1;AF=0.401	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.044:0.956,0.044,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.944:0,0.055,0.944	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	19532340	SNP-3.19530850.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.399	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.299:0,0.701,0.299	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.013:0.988,0.012,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	19532597	SNP-3.19531107.	A	G	.	PASS	AR2=0.911;DR2=0.938;AF=0.487	GT:DS:GP	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.601:0.043,0.313,0.644	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.357:0.103,0.436,0.46	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1.431:0.083,0.403,0.514	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.3:0.126,0.448,0.426	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.323:0.119,0.438,0.443	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.588:0.04,0.331,0.629	0|1:1.504:0.062,0.371,0.567	1|1:1.496:0.064,0.376,0.56	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.379:0.092,0.436,0.471	1|1:1.495:0.064,0.376,0.559	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.582:0.043,0.332,0.625	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.776:0.02,0.184,0.796	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.603:0.038,0.321,0.641	1|1:1.553:0.048,0.351,0.601	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.537:0.052,0.36,0.588	0|0:0:1,0,0	1|1:1.28:0.128,0.464,0.408	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.453:0.078,0.391,0.531	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.46:0.072,0.395,0.532	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.17:0.162,0.506,0.332	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.46:0.075,0.391,0.534	1|1:2:0,0,1	1|1:1.489:0.067,0.377,0.556	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.624:0.037,0.303,0.661	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.33:0.113,0.444,0.443	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.723:0.028,0.222,0.75	1|0:1:0,1,0	1|1:1.501:0.063,0.373,0.564	1|1:1.487:0.074,0.364,0.561	1|1:1.326:0.115,0.445,0.44	1|1:1.33:0.113,0.444,0.443	0|1:1.319:0.117,0.447,0.436	0|1:1:0,1,0	0|1:1.305:0.125,0.444,0.43	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.753:0.023,0.2,0.777	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.783:0.021,0.175,0.804	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.33:0.113,0.444,0.443	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.599:0.043,0.314,0.643	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19536512	SNP-3.19535022.	C	A	.	PASS	AR2=0.955;DR2=0.965;AF=0.462	GT:DS:GP	0|0:0.126:0.878,0.118,0.004	1|1:2:0,0,1	0|1:0.814:0.374,0.439,0.188	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.171:0.841,0.146,0.012	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.107:0.897,0.098,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.115:0.888,0.108,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.1:0.904,0.092,0.004	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.278:0.741,0.241,0.018	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.936,0.061,0.002	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0.073:0.929,0.069,0.002	0|0:0:1,0,0	0|0:0.13:0.874,0.122,0.004	0|0:0.117:0.887,0.109,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.119:0.885,0.111,0.004	1|1:2:0,0,1	0|1:1.288:0.139,0.435,0.427	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.117:0.887,0.109,0.004	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.403:0.089,0.419,0.492	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.072:0.93,0.068,0.002	0|0:0.084:0.917,0.081,0.002	1|1:1.431:0.082,0.405,0.513	1|1:1.454:0.075,0.395,0.529	0|0:0.116:0.888,0.108,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.959,0.04,0.001	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.028,0.972	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.473:0.053,0.421,0.526	1|1:2:0,0,1	0|1:0.905:0.171,0.753,0.076	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.969:0,0.031,0.969	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.073:0.205,0.517,0.278	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.474:0.067,0.392,0.541	0|0:0:1,0,0	1|1:1.093:0.217,0.472,0.311	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.082:0.92,0.078,0.002	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.293:0.729,0.248,0.022	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.944,0.055,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.425:0.083,0.408,0.509	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.974,0.026,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.128:0.194,0.483,0.323	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.322:0.112,0.454,0.434	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19538465	SNP-3.19536975.	C	A	.	PASS	AR2=0.967;DR2=0.975;AF=0.314	GT:DS:GP	0|0:0:1,0,0	1|1:1.825:0.008,0.158,0.834	0|0:0:1,0,0	1|1:1.785:0.012,0.191,0.797	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.385:0.091,0.434,0.476	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.691:0.026,0.257,0.717	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.81:0.009,0.172,0.819	1|1:2:0,0,1	1|1:1.75:0.016,0.218,0.766	1|1:1.785:0.012,0.191,0.797	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.979:0,0.021,0.979	1|1:1.965:0.001,0.033,0.966	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.828:0.009,0.155,0.836	1|1:1.83:0.009,0.152,0.839	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.799:0.01,0.181,0.809	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.826:0.007,0.16,0.833	1|0:1.467:0.045,0.442,0.513	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.826:0.009,0.156,0.835	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.804:0.009,0.177,0.813	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.825:0.003,0.169,0.828	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.828:0.007,0.159,0.834	1|1:1.844:0.005,0.147,0.848	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.865:0.006,0.123,0.871	1|1:2:0,0,1	1|1:1.861:0.008,0.123,0.869	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.341:0.127,0.405,0.468	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.822:0.021,0.136,0.843	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.808:0.009,0.175,0.816	0|0:0:1,0,0	1|1:1.554:0.033,0.38,0.587	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.843:0.009,0.139,0.852	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.872:0.007,0.114,0.879	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.842:0.008,0.142,0.85	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.83:0.008,0.153,0.838	0|0:0:1,0,0
+3	19543078	SNP-3.19541588.	C	A	.	PASS	AR2=0.992;DR2=0.993;AF=0.354	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.02:0.981,0.019,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.903:0.001,0.094,0.905	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:1.908:0.001,0.09,0.909	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.975:0,0.024,0.975	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.929:0.001,0.069,0.93	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.969:0,0.03,0.969	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.946:0.001,0.052,0.947	0|0:0:1,0,0	1|1:1.935:0.001,0.062,0.937	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.95:0,0.049,0.951	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.972:0,0.027,0.972	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.912:0.003,0.082,0.915	1|1:2:0,0,1	1|1:1.971:0,0.028,0.972	1|1:1.913:0.004,0.078,0.918	1|1:2:0,0,1	1|1:1.871:0.002,0.126,0.872	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.968,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.971:0,0.028,0.972	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	1|1:1.637:0.039,0.285,0.676	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.119:0.881,0.119,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.953:0.001,0.046,0.953	1|1:1.938:0.001,0.059,0.939	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.917:0.001,0.081,0.918	0|0:0:1,0,0
+3	19570108	SNP-3.19568618.	C	A	.	PASS	AR2=0.962;DR2=0.971;AF=0.366	GT:DS:GP	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.734:0.446,0.375,0.179	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.073:0.93,0.067,0.003	0|0:0.216:0.792,0.201,0.008	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.874:0.004,0.117,0.879	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.937,0.061,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.963,0.037,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.112:0.891,0.107,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.025:0.976,0.024,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.958,0.04,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.028,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.086:0.917,0.08,0.003	0|0:0.149:0.857,0.137,0.006	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.725:0.015,0.245,0.74	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.765:0.012,0.21,0.778	1|1:2:0,0,1	1|1:1.915:0.003,0.079,0.918	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.529:0.066,0.339,0.595	1|1:2:0,0,1	0|1:0.677:0.362,0.598,0.04	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.089:0.911,0.088,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.772:0.012,0.205,0.783	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.625:0.053,0.27,0.678	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.933:0.282,0.502,0.216	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.779:0.006,0.21,0.785	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.382:0.106,0.406,0.488	0|0:0.115:0.891,0.104,0.006	0|0:0.054:0.946,0.054,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|1:1.343:0.104,0.448,0.447	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.137:0.868,0.127,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.187:0.818,0.178,0.005	0|0:0:1,0,0	0|0:0.118:0.886,0.109,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.153:0.854,0.14,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.513:0.075,0.337,0.588	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.958,0.04,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.891:0.004,0.102,0.894	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.106:0.196,0.503,0.302	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19580263	SNP-3.19578773.	A	G	.	PASS	AR2=0.945;DR2=0.961;AF=0.454	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.563:0.036,0.365,0.599	1|1:1.681:0.027,0.266,0.707	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0.195:0.814,0.178,0.008	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.533:0.057,0.354,0.589	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.615:0.036,0.313,0.651	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.769:0.015,0.201,0.784	1|1:1.271:0.131,0.468,0.401	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.614:0.039,0.308,0.653	1|1:1.722:0.015,0.248,0.737	1|1:2:0,0,1	1|1:1.693:0.027,0.253,0.72	1|1:1.777:0.007,0.21,0.784	1|1:1.428:0.086,0.4,0.514	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.77:0.019,0.193,0.788	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.523:0.059,0.359,0.582	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.072:0.929,0.07,0.001	0|0:0:1,0,0	0|0:0.305:0.733,0.23,0.038	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.484:0.069,0.378,0.553	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.397:0.094,0.415,0.491	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.574:0.04,0.347,0.613	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.357:0.096,0.451,0.453	1|1:1.954:0,0.046,0.954	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.671:0.015,0.3,0.686	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:1.801:0.003,0.193,0.804	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.93:0.001,0.068,0.931	1|1:1.964:0,0.036,0.964	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.969:0,0.031,0.969	1|1:1.798:0.013,0.177,0.81	1|1:1.791:0.013,0.184,0.803	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.654:0.026,0.293,0.681	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.805:0.012,0.17,0.817	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.933:0.003,0.062,0.936	1|1:1.572:0.044,0.341,0.615	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.557:0.055,0.333,0.612	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.306:0.142,0.411,0.448	0|0:0:1,0,0	1|1:2:0,0,1
+3	19580733	SNP-3.19579243.	C	A	.	PASS	AR2=0.967;DR2=0.974;AF=0.422	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.275:0.743,0.238,0.018	0|0:0.186:0.824,0.166,0.01	0|0:0.265:0.756,0.223,0.021	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.186:0.822,0.171,0.007	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.063:0.938,0.062,0	0|0:0:1,0,0	0|0:0.318:0.709,0.265,0.026	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.36:0.657,0.327,0.017	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0.327:0.706,0.262,0.032	0|0:0.203:0.809,0.179,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.204:0.807,0.182,0.011	0|0:0:1,0,0	0|0:0.178:0.831,0.16,0.009	0|0:0:1,0,0	0|0:0.199:0.807,0.186,0.006	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.489:0.572,0.367,0.061	0|0:0:1,0,0	0|0:0.197:0.82,0.163,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.192:0.818,0.171,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.198:0.813,0.177,0.011	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.855:0.213,0.719,0.068	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.281:0.733,0.253,0.014	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.086:0.914,0.085,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.399:0.637,0.327,0.036	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.144:0.864,0.128,0.008	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.405:0.643,0.308,0.049	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.269:0.742,0.247,0.011	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.113:0.893,0.102,0.005	0|0:0.192:0.819,0.17,0.011	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.05:0.95,0.049,0	0|0:0.021:0.979,0.021,0	0|0:0.323:0.705,0.268,0.027	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.16:0.856,0.128,0.016	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19581039	SNP-3.19579549.	A	G	.	PASS	AR2=0.872;DR2=0.905;AF=0.266	GT:DS:GP	0|1:1.405:0.1,0.395,0.505	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.292:0.131,0.447,0.423	1|0:1.449:0.078,0.395,0.527	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.848:0.291,0.57,0.139	1|0:1.196:0.14,0.524,0.336	0|0:0:1,0,0	0|0:0.246:0.767,0.219,0.014	1|1:2:0,0,1	1|0:1.212:0.105,0.579,0.317	0|0:0.115:0.889,0.107,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.214:0.797,0.193,0.011	1|0:0.741:0.349,0.561,0.09	1|0:1.254:0.076,0.594,0.33	1|0:1.044:0.182,0.592,0.226	1|1:2:0,0,1	0|1:0.829:0.242,0.688,0.071	0|0:0.852:0.344,0.46,0.196	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.525:0.061,0.353,0.586	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.308:0.116,0.46,0.424	1|1:2:0,0,1	1|0:0.968:0.291,0.451,0.258	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.512:0.54,0.409,0.052	1|1:2:0,0,1	0|0:0.39:0.642,0.326,0.032	0|0:0:1,0,0	0|0:0.149:0.863,0.125,0.012	0|0:0.622:0.47,0.439,0.092	0|0:0:1,0,0	1|0:0.858:0.314,0.513,0.173	1|1:2:0,0,1	0|1:0.702:0.451,0.397,0.152	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.258:0.75,0.243,0.008	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.719:0.505,0.271,0.224	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.168:0.139,0.554,0.307	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.597:0.047,0.31,0.643	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.48:0.07,0.381,0.55	0|0:0:1,0,0	0|1:1.173:0.029,0.768,0.203	0|1:1.323:0.127,0.423,0.45	0|0:0.046:0.955,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.921,0.078,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.05:0.95,0.05,0	0|0:0.08:0.923,0.074,0.003	0|0:0.096:0.907,0.09,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.995:0.141,0.723,0.136	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.727:0.364,0.545,0.091	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.582:0.465,0.488,0.047	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.43:0.607,0.355,0.038	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.453:0.072,0.403,0.525	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.565:0.028,0.379,0.593	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.481:0.075,0.369,0.556	0|0:0.256:0.764,0.217,0.019	1|0:0.791:0.281,0.647,0.072	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.226:0.784,0.206,0.01	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.215:0.181,0.422,0.397	0|0:0:1,0,0	1|1:1.469:0.052,0.427,0.521	0|0:0:1,0,0	0|0:0.079:0.924,0.074,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.353:0.107,0.432,0.461	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.066:0.937,0.06,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.47:0.6,0.331,0.07	1|1:2:0,0,1	1|0:1.586:0.048,0.317,0.634	0|0:0:1,0,0	0|0:0.193:0.816,0.175,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.969,0.03,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	19587166	SNP-3.19585676.	C	A	.	PASS	AR2=1;DR2=1;AF=0.356	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19588936	SNP-3.19587446.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.373	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.086:0.919,0.077,0.005	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.937,0.062,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.051:0.95,0.048,0.001	0|0:0.034:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.941,0.058,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.962,0.037,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.017,0	0|0:0:1,0,0	0|0:0.03:0.97,0.029,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.091:0.911,0.086,0.003	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.029:0.971,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.093:0.909,0.088,0.003	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.931,0.067,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.965,0.034,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19595062	SNP-3.19593572.	A	G	.	PASS	AR2=1;DR2=1;AF=0.251	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19596740	SNP-3.19595250.	C	A	.	PASS	AR2=1;DR2=1;AF=0.346	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19596996	SNP-3.19595506.	A	G	.	PASS	AR2=0.996;DR2=0.997;AF=0.31	GT:DS:GP	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.977:0,0.023,0.977	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.16:0.848,0.144,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.162:0.846,0.146,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0.057:0.944,0.055,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.958,0.042,0	1|0:1:0,1,0	0|0:0.05:0.951,0.049,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.119:0.883,0.114,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.99:0,0.009,0.99	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.976:0,0.024,0.976	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.048:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	19601864	SNP-3.19600374.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.475	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.945,0.054,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.961,0.038,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.033,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.973,0.027,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19605197	SNP-3.19603707.	C	A	.	PASS	AR2=1;DR2=1;AF=0.362	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19605762	SNP-3.19604272.	C	A	.	PASS	AR2=1;DR2=1;AF=0.356	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.963:0,0.037,0.963	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19606910	SNP-3.19605420.	C	A	.	PASS	AR2=1;DR2=1;AF=0.465	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19607249	SNP-3.19605759.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.395	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.975:0,0.025,0.975	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.026,0.973	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.886:0.005,0.103,0.891	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.055:0.946,0.053,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	19610709	SNP-3.19609219.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.339	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.109:0.021,0.849,0.13	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.979:0,0.021,0.979	1|1:1.825:0.008,0.159,0.833	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.808:0.006,0.179,0.814	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.947:0.001,0.052,0.947	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.974:0,0.026,0.974	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.936:0.002,0.059,0.938	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.912:0.002,0.083,0.915	0|0:0:1,0,0
+3	19611179	SNP-3.19609689.	C	A	.	PASS	AR2=0.997;DR2=0.998;AF=0.359	GT:DS:GP	0|0:0.077:0.924,0.075,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.983:0,0.016,0.984	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.118:0.882,0.118,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.943,0.056,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	0|0:0.015:0.985,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.13:0.872,0.125,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.95:0.001,0.049,0.95	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.069:0.932,0.068,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.982:0,0.018,0.982	0|0:0:1,0,0
+3	19612474	SNP-3.19610984.	C	A	.	PASS	AR2=0.979;DR2=0.984;AF=0.332	GT:DS:GP	0|0:0:1,0,0	1|1:1.973:0,0.027,0.973	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.701:0.032,0.235,0.733	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.564:0.037,0.361,0.602	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.971:0,0.028,0.971	1|1:2:0,0,1	1|1:1.902:0.003,0.093,0.904	1|1:1.597:0.025,0.352,0.623	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.87:0.012,0.106,0.882	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.648:0.033,0.286,0.681	0|0:0:1,0,0	1|1:1.497:0.062,0.38,0.558	0|0:0:1,0,0	1|1:1.784:0.007,0.201,0.792	1|1:1.836:0.002,0.16,0.838	1|1:1.981:0,0.019,0.981	1|1:1.694:0.024,0.258,0.718	1|1:1.975:0,0.025,0.975	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.603:0.038,0.322,0.64	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.968:0,0.032,0.968	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.946:0.001,0.053,0.946	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.754:0.025,0.196,0.779	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.887:0.001,0.11,0.888	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.606:0.041,0.313,0.646	0|0:0:1,0,0
+3	19614779	SNP-3.19613289.	A	G	.	PASS	AR2=1;DR2=1;AF=0.286	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	19615499	SNP-3.19614009.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.462	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.81:0.006,0.178,0.816	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.041:0.96,0.039,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.937:0.001,0.061,0.938	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.8:0.006,0.188,0.806	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19616179	SNP-3.19614689.	A	G	.	PASS	AR2=0.955;DR2=0.965;AF=0.318	GT:DS:GP	1|0:1:0,1,0	0|0:0.031:0.969,0.03,0	1|1:2:0,0,1	0|0:0.039:0.961,0.038,0.001	0|0:0:1,0,0	0|0:0.233:0.779,0.208,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.247:0.785,0.182,0.032	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.127:0.877,0.119,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.096:0.906,0.093,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.329:0.697,0.276,0.027	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.924:0.001,0.074,0.925	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.947,0.052,0.001	0|0:0.245:0.761,0.233,0.006	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.922:0.001,0.075,0.924	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:1.919:0.003,0.076,0.921	1|1:2:0,0,1	0|1:0.886:0.362,0.389,0.249	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.964:0,0.035,0.964	0|0:0:1,0,0	0|1:0.521:0.5,0.479,0.021	1|1:1.909:0.003,0.085,0.912	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.407:0.011,0.571,0.418	1|1:1.506:0.018,0.458,0.524	1|1:2:0,0,1	1|1:1.895:0.003,0.098,0.899	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	1|0:0.853:0.278,0.591,0.131	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.02:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.49:0.529,0.452,0.019	0|0:0.075:0.926,0.073,0.001	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	1|0:0.979:0.09,0.841,0.069	0|0:0.287:0.738,0.236,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.969,0.03,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.356:0.677,0.29,0.033	0|0:0.027:0.973,0.026,0	0|0:0.096:0.905,0.094,0.001	0|0:0:1,0,0	1|0:1.274:0.031,0.664,0.305	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.088:0.914,0.085,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.304:0.72,0.256,0.024	0|0:0.263:0.752,0.233,0.015	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.499:0.527,0.446,0.026	0|0:0.211:0.83,0.13,0.04	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:0.862:0.29,0.558,0.152	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.964:0,0.036,0.964	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.957,0.043,0.001	0|0:0.158:0.849,0.144,0.007	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.029:0.972,0.027,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.075:0.932,0.061,0.007	0|0:0:1,0,0	1|1:2:0,0,1
+3	19616877	SNP-3.19615387.	C	A	.	PASS	AR2=0.941;DR2=0.958;AF=0.27	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.489:0.069,0.373,0.558	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.852:0.286,0.576,0.138	0|0:0:1,0,0	0|0:0.725:0.405,0.464,0.131	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.394:0.091,0.424,0.485	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.008:0.165,0.661,0.174	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.836:0.007,0.151,0.842	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|1:1.294:0.124,0.457,0.418	1|0:1.131:0.193,0.484,0.324	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.285:0.072,0.571,0.357	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.788:0.016,0.179,0.804	0|0:0:1,0,0	1|1:1.622:0.008,0.363,0.629	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.458:0.064,0.415,0.522	1|1:1.528:0.056,0.36,0.584	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.959:0.001,0.04,0.96	1|1:2:0,0,1	1|1:1.919:0.001,0.079,0.92	1|1:1.447:0.074,0.404,0.521	1|1:1.84:0.003,0.153,0.843	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.509:0.064,0.364,0.572	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.529:0.02,0.431,0.549	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.958:0,0.041,0.959	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.55:0.054,0.341,0.604	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.123:0.308,0.262,0.431	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.926:0.001,0.073,0.926	1|1:2:0,0,1	1|1:1.508:0.065,0.361,0.574	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.685:0.37,0.574,0.056	0|0:0.324:0.706,0.264,0.03	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0
+3	19616878	SNP-3.19615388.	C	A	.	PASS	AR2=0.919;DR2=0.94;AF=0.284	GT:DS:GP	0|0:0:1,0,0	1|0:1.328:0.12,0.432,0.448	0|0:0:1,0,0	0|1:1.123:0.218,0.442,0.341	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.387:0.111,0.39,0.499	0|1:1.213:0.109,0.569,0.322	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.49:0.07,0.371,0.56	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.915:0.004,0.078,0.918	1|1:1.895:0.004,0.097,0.899	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.525:0.056,0.362,0.582	0|0:1.142:0.2,0.458,0.342	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.083:0.203,0.511,0.286	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.864:0.003,0.13,0.867	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.961,0.039,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.38:0.082,0.457,0.461	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.016:0.246,0.492,0.262	1|1:1.44:0.078,0.404,0.518	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1.217:0.147,0.489,0.364	1|1:1.244:0.145,0.467,0.388	1|1:2:0,0,1	1|1:1.594:0.052,0.302,0.646	1|1:2:0,0,1	1|1:1.93:0,0.069,0.93	1|1:1.924:0.006,0.065,0.93	1|0:1.203:0.163,0.471,0.366	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.959:0.001,0.039,0.96	1|1:1.603:0.048,0.302,0.65	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.398:0.094,0.413,0.493	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.258:0.144,0.455,0.402	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.007,0.992	1|1:1.236:0.146,0.471,0.383	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:1.469:0.076,0.379,0.545	0|0:0:1,0,0	1|1:1.512:0.076,0.335,0.589	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.548:0.062,0.328,0.61	0|0:0:1,0,0	1|1:1.982:0,0.017,0.983	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.296:0.145,0.415,0.441	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.399:0.1,0.4,0.5	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.12:0.219,0.442,0.339	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19618127	SNP-3.19616637.	A	G	.	PASS	AR2=0.901;DR2=0.929;AF=0.53	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.739:0.035,0.192,0.774	0|0:0:1,0,0	1|1:1.656:0.028,0.288,0.684	1|1:1.482:0.066,0.386,0.548	1|1:1.314:0.117,0.453,0.431	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.636:0.034,0.296,0.67	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.859:0.004,0.133,0.863	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.923:0.001,0.075,0.924	1|1:1.45:0.088,0.373,0.538	0|1:0.849:0.345,0.461,0.194	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.492:0.067,0.375,0.559	1|0:1.077:0.023,0.877,0.1	0|0:0:1,0,0	0|1:1.091:0.004,0.901,0.095	1|1:1.95:0.001,0.048,0.951	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:1.621:0.029,0.321,0.65	1|1:1.94:0.002,0.057,0.942	1|1:1.611:0.01,0.368,0.621	0|0:0:1,0,0	1|0:1.46:0.071,0.398,0.531	1|1:1.634:0.025,0.316,0.659	1|1:1.687:0.033,0.247,0.72	1|1:2:0,0,1	1|1:1.97:0,0.029,0.97	1|1:2:0,0,1	1|1:1.367:0.105,0.423,0.472	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.41:0.086,0.418,0.496	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.436:0.08,0.404,0.516	1|1:2:0,0,1	1|1:1.875:0.002,0.121,0.877	1|0:1.394:0.092,0.422,0.486	1|1:2:0,0,1	1|1:1.5:0.074,0.352,0.574	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.54:0.047,0.365,0.587	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.412:0.066,0.455,0.479	1|1:1.661:0.036,0.267,0.697	0|0:1.384:0.095,0.426,0.479	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.386:0.095,0.425,0.48	1|1:1.812:0.012,0.165,0.824	1|1:1.963:0.001,0.035,0.964	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.524:0.059,0.358,0.583	1|1:1.387:0.093,0.427,0.48	1|1:1.863:0.007,0.123,0.87	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.472:0.069,0.389,0.542	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.977:0,0.023,0.977	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.969:0,0.031,0.969	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.941:0,0.059,0.941	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.945:0.001,0.052,0.946	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.422:0.084,0.41,0.506	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.497:0.064,0.374,0.562	1|1:2:0,0,1	1|1:1.902:0.003,0.092,0.905	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.513:0.06,0.368,0.572	0|1:1.138:0.163,0.535,0.302	0|1:0.982:0.177,0.664,0.159	0|0:0:1,0,0	1|0:1.727:0.017,0.239,0.744	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.423:0.083,0.411,0.506	0|0:0:1,0,0	1|1:1.702:0.022,0.254,0.724	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.948:0.002,0.048,0.95	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.699:0.024,0.252,0.723	1|1:1.95:0.001,0.048,0.951	0|0:0.863:0.317,0.504,0.18	0|0:0:1,0,0	1|1:1.404:0.09,0.417,0.494	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.636:0.012,0.339,0.649	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.956:0.001,0.042,0.957	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.908:0.002,0.088,0.91	1|1:2:0,0,1	1|1:1.962:0.001,0.035,0.964	1|1:1.471:0.074,0.381,0.545	1|1:2:0,0,1	0|1:1.461:0.073,0.394,0.534	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.408:0.102,0.387,0.511	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.964:0.001,0.034,0.965	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.95:0.003,0.044,0.953	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	19618567	SNP-3.19617077.	C	A	.	PASS	AR2=0.983;DR2=0.985;AF=0.367	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.127:0.876,0.121,0.003	0|0:0.096:0.906,0.092,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.49:0.13,0.25,0.62	0|0:0.179:0.829,0.162,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.221:0.795,0.188,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.956,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.958,0.041,0.001	0|0:0.004:0.996,0.004,0	0|0:0.126:0.878,0.118,0.004	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0.058:0.942,0.058,0	0|0:0.036:0.964,0.035,0.001	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.046:0.955,0.045,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.685:0.016,0.283,0.701	1|1:2:0,0,1	0|0:0.022:0.978,0.022,0	1|1:2:0,0,1	0|0:0.067:0.934,0.065,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.801:0.012,0.174,0.814	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.844:0.003,0.149,0.848	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.049:0.951,0.049,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.088:0.915,0.082,0.003	1|1:2:0,0,1	1|1:1.956:0.001,0.042,0.957	1|1:2:0,0,1	1|1:1.946:0.001,0.053,0.947	1|1:1.925:0.002,0.071,0.927	1|1:1.977:0,0.023,0.977	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.018,0.981	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.167:0.84,0.154,0.007	0|0:0.154:0.851,0.143,0.006	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.008:0.993,0.007,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.194:0.806,0.194,0	0|0:0.013:0.987,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.072:0.929,0.07,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.986,0.014,0	0|0:0:1,0,0	0|0:0.118:0.887,0.108,0.005	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.948:0.001,0.05,0.949	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.961:0,0.039,0.961	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0.138:0.885,0.092,0.023	1|1:2:0,0,1	0|0:0:1,0,0
+3	19623746	SNP-3.19622256.	C	A	.	PASS	AR2=0.952;DR2=0.963;AF=0.315	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.014:0.986,0.014,0	1|1:1.57:0.048,0.334,0.618	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.066:0.935,0.063,0.001	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.079:0.922,0.076,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.081:0.92,0.078,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.968,0.032,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0.062:0.94,0.059,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.944,0.055,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.808:0.009,0.175,0.817	1|1:2:0,0,1	1|1:1.909:0.003,0.085,0.912	1|1:1.895:0.004,0.098,0.898	1|0:0.913:0.27,0.547,0.183	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.654:0.04,0.267,0.693	1|1:2:0,0,1	1|0:1.538:0.051,0.361,0.589	0|0:0:1,0,0	1|1:1.54:0.054,0.353,0.593	1|1:1.295:0.119,0.466,0.415	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.506:0.062,0.371,0.567	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.891:0.002,0.104,0.894	1|1:1.547:0.048,0.357,0.595	1|1:1.763:0.03,0.176,0.794	0|0:0:1,0,0	1|1:1.543:0.055,0.347,0.598	0|0:0.088:0.915,0.082,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.238:0.773,0.216,0.011	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.653:0.028,0.291,0.681	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.764:0.015,0.206,0.779	1|1:2:0,0,1	1|1:1.503:0.063,0.37,0.567	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.728:0.024,0.223,0.753	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.937,0.062,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.6:0.042,0.315,0.642	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.673:0.025,0.278,0.697	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.561:0.05,0.339,0.611	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.521:0.058,0.363,0.579	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.609:0.037,0.317,0.646	1|1:2:0,0,1	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19627672	SNP-3.19626182.	A	G	.	PASS	AR2=0.886;DR2=0.921;AF=0.264	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.624:0.487,0.402,0.111	0|0:0:1,0,0	0|0:0.495:0.567,0.371,0.062	1|0:0.561:0.51,0.418,0.071	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.555:0.523,0.398,0.079	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.784:0.363,0.489,0.148	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.605:0.48,0.435,0.085	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.284:0.733,0.25,0.017	0|1:1.028:0.202,0.568,0.23	0|1:1:0.272,0.457,0.271	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.521:0.57,0.34,0.09	0|0:0.425:0.628,0.319,0.053	0|0:0.288:0.733,0.245,0.022	0|0:0:1,0,0	0|0:0.327:0.703,0.267,0.03	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.545:0.531,0.393,0.076	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.152:0.145,0.558,0.297	0|1:1.064:0.19,0.556,0.254	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.945:0.001,0.052,0.946	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.968:0,0.032,0.968	0|0:0.261:0.753,0.233,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.05,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.951,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.174:0.85,0.126,0.024	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.407:0.641,0.312,0.048	0|0:0:1,0,0	1|1:1.975:0,0.024,0.976	1|1:2:0,0,1	0|0:0.659:0.452,0.437,0.111	0|0:0.438:0.594,0.374,0.032	1|1:1.854:0.003,0.14,0.857	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.782:0.359,0.5,0.141	1|0:0.537:0.532,0.399,0.069	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.408:0.062,0.469,0.469	0|1:0.661:0.451,0.438,0.111	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.491:0.029,0.452,0.519	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.661:0.431,0.477,0.092	0|0:0:1,0,0	0|1:0.949:0.283,0.485,0.232	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.869:0.132,0.868,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.44:0.054,0.452,0.494	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.142:0.867,0.124,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.194:0.21,0.386,0.404	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.029:0.08,0.81,0.109	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.892:0.005,0.098,0.897	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.921:0.299,0.48,0.22	0|0:0.421:0.623,0.332,0.045	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.821:0.012,0.155,0.833	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.941:0,0.058,0.941	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:1.129:0.28,0.31,0.41	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.182:0.836,0.145,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.111:0.889,0.11,0.001	1|1:2:0,0,1
+3	19628617	SNP-3.19627127.	A	G	.	PASS	AR2=0.961;DR2=0.968;AF=0.229	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.66:0.015,0.31,0.675	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.902:0.003,0.092,0.905	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.159:0.847,0.147,0.006	1|1:2:0,0,1	0|1:1.314:0.086,0.514,0.4	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.11:0.893,0.105,0.003	0|0:0:1,0,0	0|0:0.083:0.926,0.066,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.033:0.968,0.032,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.072:0.929,0.071,0.001	0|0:0.206:0.824,0.147,0.029	0|0:0:1,0,0	0|0:0.216:0.791,0.202,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.231:0.06,0.648,0.292	0|0:0:1,0,0	0|0:0.326:0.684,0.306,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.274:0.751,0.224,0.025	0|0:0:1,0,0	0|0:0.082:0.921,0.077,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.162:0.845,0.148,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.958,0.041,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.179:0.829,0.162,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.178:0.831,0.161,0.008	0|0:0:1,0,0	0|0:0.169:0.838,0.155,0.007	0|0:0.185:0.824,0.167,0.009	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0.18:0.829,0.163,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.096:0.907,0.089,0.003	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.937,0.062,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.963,0.037,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.819:0.007,0.168,0.826	1|1:1.711:0.024,0.24,0.736	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.166:0.841,0.152,0.007	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.092:0.911,0.086,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.307:0.704,0.286,0.011	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.966,0.033,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.131:0.874,0.121,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.108:0.895,0.103,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.386:0.665,0.283,0.052	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19629736	SNP-3.19628246.	C	A	.	PASS	AR2=0.939;DR2=0.954;AF=0.434	GT:DS:GP	0|0:0.33:0.698,0.275,0.028	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.327:0.699,0.276,0.025	0|1:1:0,1,0	0|0:0.529:0.525,0.421,0.054	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.255:0.762,0.221,0.017	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.203:0.807,0.182,0.01	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.258:0.763,0.215,0.022	0|0:0.256:0.76,0.224,0.016	0|1:1:0,1,0	0|0:0.216:0.796,0.192,0.012	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.062:0.94,0.059,0.002	0|0:0.053:0.948,0.051,0.001	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.312:0.697,0.294,0.009	0|0:0:1,0,0	0|1:0.635:0.446,0.473,0.081	0|1:1:0,1,0	0|0:0:1,0,0	1|0:0.561:0.504,0.431,0.065	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.39:0.65,0.31,0.04	0|0:0.47:0.585,0.36,0.055	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.309:0.715,0.261,0.024	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.936:0.001,0.061,0.937	1|1:1.843:0.007,0.142,0.85	1|1:2:0,0,1	1|1:1.706:0.021,0.252,0.727	1|1:1.866:0.004,0.125,0.87	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.864:0.002,0.132,0.866	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.38:0.655,0.31,0.035	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.205:0.805,0.184,0.01	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.674:0.021,0.283,0.696	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.171:0.831,0.167,0.002	0|0:0.016:0.984,0.016,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.32:0.706,0.268,0.026	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.307:0.718,0.258,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.499:0.554,0.393,0.053	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.33:0.697,0.275,0.028	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.812:0.011,0.166,0.823	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.301:0.721,0.257,0.022	0|0:0:1,0,0	0|0:0.378:0.641,0.34,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.33:0.697,0.275,0.028	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.228:0.782,0.209,0.009	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.327:0.7,0.273,0.027	0|0:0:1,0,0	0|0:0.254:0.756,0.234,0.01	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.109:0.906,0.079,0.015	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.23:0.784,0.202,0.014	0|0:0:1,0,0	1|0:0.794:0.36,0.486,0.154	0|0:0.32:0.706,0.267,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.191:0.819,0.171,0.01	1|1:2:0,0,1	0|0:0.16:0.847,0.147,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.261:0.759,0.22,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0
+3	19630493	SNP-3.19629003.	A	G	.	PASS	AR2=1;DR2=1;AF=0.284	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.949:0.001,0.049,0.95	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	19630519	SNP-3.19629029.	C	A	.	PASS	AR2=0.988;DR2=0.991;AF=0.327	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.78:0.012,0.195,0.792	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.933:0.002,0.064,0.934	1|1:2:0,0,1	1|1:1.93:0.002,0.067,0.932	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.938:0.002,0.058,0.94	0|0:0:1,0,0	1|1:1.814:0.009,0.169,0.823	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.903:0.003,0.092,0.905	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.843:0.006,0.145,0.849	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.708:0.005,0.283,0.713	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.41:0.138,0.313,0.548	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.936:0,0.064,0.936	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.922:0.003,0.072,0.925	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.79:0.024,0.161,0.814	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19630572	SNP-3.19629082.	C	A	.	PASS	AR2=0.993;DR2=0.994;AF=0.471	GT:DS:GP	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	1|1:1.991:0,0.008,0.991	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.044:0.957,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.042:0.958,0.042,0	0|0:0.188:0.814,0.184,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.956,0.044,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.845:0.167,0.82,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.122:0.88,0.119,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.349:0.001,0.649,0.35	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.036,0	1|1:1.965:0,0.034,0.966	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.044:0.957,0.043,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.981:0,0.018,0.981	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.936,0.063,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.986:0,0.013,0.987	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.179:0.825,0.17,0.005	0|0:0:1,0,0	0|0:0.054:0.947,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.026:0.974,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.043:0.958,0.041,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19631305	SNP-3.19629815.	C	A	.	PASS	AR2=0.986;DR2=0.99;AF=0.413	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.011:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.902:0.002,0.095,0.903	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.969:0,0.031,0.969	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.862:0.003,0.131,0.865	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:0.49:0.565,0.379,0.056	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.492:0.57,0.369,0.061	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.398:0.641,0.319,0.04	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.075:0.925,0.075,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.955:0.001,0.043,0.956	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.476:0.59,0.343,0.067	1|1:2:0,0,1	1|1:1.936:0.002,0.061,0.937	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.518:0.52,0.442,0.038	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1
+3	19632687	SNP-3.19631197.	C	A	.	PASS	AR2=0.997;DR2=0.997;AF=0.352	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.962:0,0.037,0.963	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:1.98:0,0.02,0.98	0|0:0:1,0,0	0|0:0.107:0.893,0.107,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.958:0,0.041,0.958	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.977:0,0.022,0.978	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.96:0,0.039,0.961	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.18:0.82,0.18,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.979:0,0.02,0.98	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.962:0,0.037,0.962	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.954:0.001,0.045,0.955	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.977:0,0.023,0.977	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.963:0,0.036,0.963	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.971:0,0.028,0.971	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19632711	SNP-3.19631221.	A	G	.	PASS	AR2=0.987;DR2=0.99;AF=0.229	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.03:0.97,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.066:0.935,0.064,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.077:0.925,0.074,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.93,0.068,0.001	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.767:0.014,0.204,0.781	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.822:0.008,0.161,0.83	0|0:0:1,0,0	1|1:1.752:0.016,0.217,0.768	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.602:0.048,0.303,0.649	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.65:0.041,0.269,0.69	1|1:1.757:0.016,0.21,0.773	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.989:0,0.011,0.989	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19636067	SNP-3.19634577.	C	A	.	PASS	AR2=0.953;DR2=0.965;AF=0.309	GT:DS:GP	0|0:0:1,0,0	1|1:1.531:0.059,0.351,0.59	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.564:0.046,0.343,0.61	1|1:1.587:0.046,0.321,0.633	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.602:0.042,0.314,0.644	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.89:0.008,0.094,0.898	1|1:2:0,0,1	1|1:1.601:0.037,0.325,0.638	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.835:0.013,0.139,0.848	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.749:0.016,0.218,0.765	1|1:1.593:0.046,0.315,0.639	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.713:0.013,0.261,0.726	0|0:0:1,0,0	1|1:1.577:0.045,0.333,0.622	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.88:0.002,0.116,0.882	1|1:2:0,0,1	1|0:1.596:0.04,0.325,0.635	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.895:0.008,0.089,0.903	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.558:0.05,0.342,0.608	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.956:0.001,0.042,0.957	1|0:1.541:0.054,0.352,0.594	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.636:0.032,0.301,0.668	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1.485:0.069,0.377,0.554	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.623:0.033,0.311,0.656	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.861:0.001,0.137,0.862	1|1:2:0,0,1	1|1:1.535:0.058,0.35,0.592	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.566:0.053,0.328,0.619	0|0:0:1,0,0	1|1:1.515:0.062,0.361,0.577	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.68:0.025,0.27,0.705	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.61:0.034,0.323,0.643	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.768:0.019,0.194,0.787	0|0:0:1,0,0
+3	19638983	SNP-3.19637493.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.38	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.188:0.821,0.17,0.009	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0.148:0.857,0.137,0.005	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.065:0.937,0.062,0.002	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.11:0.893,0.104,0.003	0|0:0:1,0,0	0|0:0.19:0.82,0.17,0.01	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.027:0.973,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.151:0.856,0.137,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.182:0.826,0.165,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.016:0.984,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19643016	SNP-3.19641526.	C	A	.	PASS	AR2=0.921;DR2=0.94;AF=0.285	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.753:0.016,0.215,0.769	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.453:0.078,0.391,0.531	1|1:1.255:0.141,0.463,0.396	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.271:0.136,0.457,0.407	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.155:0.849,0.147,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.959,0.041,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.31:0.691,0.307,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1.284:0.06,0.595,0.344	1|1:2:0,0,1	1|1:1.409:0.08,0.43,0.49	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.679:0.028,0.266,0.707	0|1:1:0,1,0	0|1:1.161:0.171,0.496,0.332	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.74:0.016,0.227,0.757	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.034:0.967,0.032,0.001	0|1:1.027:0.24,0.493,0.267	1|1:1.311:0.101,0.486,0.413	1|1:1.375:0.086,0.453,0.461	1|0:1.172:0.153,0.521,0.325	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.105:0.193,0.508,0.299	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.849:0.001,0.149,0.85	1|1:1.603:0.063,0.271,0.666	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.14:0.187,0.486,0.327	1|0:1.221:0.146,0.488,0.367	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.236:0.172,0.421,0.408	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.584:0.061,0.294,0.645	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.92:0.001,0.079,0.92	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.181:0.17,0.479,0.351	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.337:0.134,0.396,0.47	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.697:0.021,0.261,0.718	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.096:0.203,0.498,0.299	1|1:1.036:0.323,0.319,0.358	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.067:0.934,0.065,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19652068	SNP-3.19650578.	A	G	.	PASS	AR2=0.908;DR2=0.929;AF=0.425	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.475:0.058,0.41,0.532	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.725:0.017,0.24,0.743	1|1:1.729:0.02,0.231,0.749	1|0:1.27:0.12,0.49,0.39	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.769:0.014,0.204,0.782	1|1:1.412:0.091,0.406,0.503	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.697:0.024,0.255,0.721	1|1:1.796:0.009,0.185,0.805	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.357:0.087,0.469,0.444	0|1:1.515:0.037,0.411,0.552	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.685:0.025,0.265,0.71	0|0:0:1,0,0	0|1:1.252:0.124,0.5,0.376	1|1:1.996:0,0.004,0.996	1|1:1.858:0.004,0.133,0.863	1|0:1:0,1,0	0|0:0:1,0,0	0|1:0.846:0.154,0.846,0	1|1:1.493:0.065,0.377,0.558	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.467:0.073,0.388,0.54	0|1:0.858:0.352,0.439,0.209	1|1:1.632:0.04,0.288,0.672	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.263:0.121,0.495,0.384	0|1:1.138:0.097,0.667,0.235	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.957:0.001,0.042,0.958	1|1:2:0,0,1	1|1:1.881:0.003,0.113,0.884	1|1:1.479:0.065,0.391,0.544	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.818:0.011,0.161,0.828	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.92:0.002,0.077,0.921	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.822:0.262,0.655,0.083	1|1:2:0,0,1	1|1:1.499:0.063,0.375,0.562	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.432:0.083,0.402,0.515	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.782:0.308,0.602,0.09	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.46:0.074,0.391,0.534	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.238:0.128,0.505,0.366	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.964:0.001,0.035,0.965	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.663:0.03,0.278,0.692	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.682:0.026,0.266,0.708	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.32:0.119,0.441,0.44	1|1:1.486:0.029,0.457,0.515	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.015:0.985,0.015,0	1|1:1.729:0.012,0.247,0.741	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.602:0.015,0.368,0.617	1|1:1.664:0.029,0.277,0.693	1|1:1.717:0.022,0.239,0.739	1|1:1.564:0.068,0.3,0.632	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.645:0.026,0.302,0.671	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.459:0.075,0.391,0.534	1|1:1.76:0.016,0.208,0.776	1|1:1.799:0.009,0.182,0.809	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.672:0.017,0.293,0.69	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.892:0.005,0.098,0.897	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.182:0.179,0.46,0.361	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.5:0.062,0.377,0.561	1|1:2:0,0,1	1|1:1.717:0.022,0.239,0.739	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.143:0.182,0.492,0.325	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:1.57:0.051,0.329,0.621	1|1:1.909:0.003,0.086,0.911	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	19654407	SNP-3.19652917.	C	A	.	PASS	AR2=0.978;DR2=0.982;AF=0.361	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.831:0.007,0.154,0.839	1|1:2:0,0,1	0|0:0.068:0.933,0.065,0.001	0|0:0:1,0,0	0|0:0.142:0.864,0.131,0.005	0|0:0.127:0.878,0.117,0.005	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.075:0.926,0.072,0.001	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.104:0.898,0.099,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.119:0.885,0.111,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.102:0.901,0.096,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.11:0.893,0.104,0.003	0|0:0:1,0,0	0|0:0.122:0.882,0.114,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.161:0.844,0.151,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.15:0.856,0.138,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.184:0.825,0.167,0.009	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.124:0.88,0.116,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.585:0.044,0.328,0.628	1|1:2:0,0,1	1|1:1.935:0.002,0.061,0.937	1|0:1:0,1,0	1|1:1.69:0.025,0.26,0.715	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.935:0.003,0.06,0.938	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.71:0.02,0.25,0.73	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.637:0.019,0.325,0.656	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0.001,0.021,0.979	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.145:0.861,0.134,0.005	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.048:0.952,0.047,0.001	0|0:0:1,0,0	0|0:0.102:0.901,0.095,0.003	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.088:0.913,0.086,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.116:0.887,0.109,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.941,0.057,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.117:0.886,0.111,0.003	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.013,0.986	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.922:0.003,0.073,0.925	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.24:0.776,0.208,0.016	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19654713	SNP-3.19653223.	C	A	.	PASS	AR2=1;DR2=1;AF=0.36	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19656074	SNP-3.19654584.	C	A	.	PASS	AR2=1;DR2=1;AF=0.356	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19656332	SNP-3.19654842.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.377	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.037:0.963,0.036,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.939,0.059,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0.088:0.914,0.084,0.002	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.929,0.07,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.074:0.926,0.073,0.001	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.939,0.061,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.166:0.839,0.155,0.006	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.021:0.008,0.963,0.029	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.932,0.066,0.001	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19656379	SNP-3.19654889.	C	A	.	PASS	AR2=1;DR2=1;AF=0.356	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19657351	SNP-3.19655861.	C	A	.	PASS	AR2=0.902;DR2=0.923;AF=0.345	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.603:0.037,0.322,0.64	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.802:0.37,0.458,0.172	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.536:0.533,0.399,0.069	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.641:0.031,0.297,0.672	1|1:2:0,0,1	1|0:1.51:0.052,0.387,0.561	1|1:1.63:0.035,0.299,0.666	1|0:1.23:0.161,0.449,0.39	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.837:0.273,0.617,0.11	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.758:0.38,0.482,0.138	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.858:0.299,0.545,0.156	1|1:1.703:0.024,0.248,0.728	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.082:0.222,0.475,0.303	0|0:0:1,0,0	0|0:0.234:0.782,0.203,0.015	0|0:0.146:0.863,0.128,0.009	0|0:0:1,0,0	1|0:0.838:0.289,0.584,0.127	0|0:0.515:0.58,0.325,0.095	1|0:1.013:0.227,0.533,0.24	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.245:0.77,0.215,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.238:0.774,0.215,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.183:0.826,0.164,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.098:0.906,0.09,0.004	0|0:0.079:0.924,0.073,0.003	0|0:0:1,0,0	1|0:0.408:0.599,0.393,0.008	0|0:0.232:0.782,0.203,0.014	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.706:0.408,0.478,0.114	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.756:0.395,0.455,0.151	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.182:0.825,0.168,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.137:0.871,0.121,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.969:0.266,0.498,0.236	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.441:0.584,0.39,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.156:0.852,0.14,0.008	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.549:0.046,0.36,0.594	0|0:0:1,0,0	0|1:0.799:0.306,0.588,0.106	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.114:0.891,0.104,0.005	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.573:0.038,0.351,0.611	1|1:2:0,0,1	1|1:1.641:0.033,0.294,0.674	1|1:1.521:0.068,0.344,0.588	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.081:0.921,0.077,0.002	0|0:0.57:0.509,0.412,0.079	0|0:0.147:0.86,0.132,0.008	1|1:2:0,0,1	0|0:0.311:0.712,0.264,0.023	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.873:0.318,0.49,0.192	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.651:0.031,0.287,0.682	0|0:0:1,0,0	1|1:1.418:0.094,0.394,0.512	1|1:1.423:0.13,0.317,0.553	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.228:0.791,0.191,0.018	1|1:1.641:0.033,0.294,0.674	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.131:0.877,0.116,0.007	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.967:0.001,0.032,0.968	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.583:0.511,0.396,0.093	0|0:0:1,0,0	0|1:0.852:0.331,0.485,0.183	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.234:0.781,0.204,0.015	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.744:0.025,0.207,0.768	0|0:0:1,0,0	0|0:0.441:0.578,0.402,0.019
+3	19664349	SNP-3.19662859.	A	G	.	PASS	AR2=0.989;DR2=0.991;AF=0.205	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.143:0.861,0.134,0.004	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.739:0.018,0.225,0.757	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.05:0.95,0.049,0.001	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.159:0.847,0.148,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.299:0.72,0.26,0.02	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.227:0.785,0.202,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.846:0.008,0.137,0.854	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.807:0.012,0.169,0.819	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19665188	SNP-3.19663698.	C	A	.	PASS	AR2=0.96;DR2=0.968;AF=0.413	GT:DS:GP	0|0:0.398:0.647,0.308,0.045	1|1:2:0,0,1	0|0:0.424:0.596,0.384,0.02	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.269:0.746,0.239,0.015	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.293:0.728,0.25,0.022	0|0:0:1,0,0	0|0:0.254:0.76,0.227,0.014	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.903:0.003,0.092,0.905	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.806:0.006,0.181,0.812	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.344:0.69,0.275,0.034	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.286:0.735,0.245,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.287:0.734,0.246,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.999,0.001,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.219:0.793,0.196,0.012	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.166:0.843,0.148,0.009	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.225:0.787,0.201,0.012	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.26:0.757,0.226,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.891:0.003,0.103,0.894	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.851:0.005,0.139,0.856	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.899:0.002,0.096,0.901	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.917:0.003,0.078,0.919	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	0|0:0.177:0.833,0.158,0.01	0|0:0:1,0,0	0|0:0.05:0.95,0.05,0	0|0:0.261:0.755,0.23,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.29:0.731,0.248,0.021	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.279:0.741,0.24,0.019	0|0:0.269:0.749,0.233,0.018	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.124:0.878,0.119,0.002	1|1:2:0,0,1	0|0:0.192:0.814,0.18,0.006	0|0:0.006:0.994,0.006,0	0|0:0.107:0.896,0.101,0.003	1|1:1.872:0.004,0.12,0.876	0|0:0.214:0.796,0.193,0.01	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.262:0.755,0.228,0.017	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.879:0.004,0.114,0.882	0|0:0.091:0.913,0.084,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.886:0.004,0.107,0.89	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.95:0.002,0.045,0.953	0|0:0:1,0,0	1|1:1.842:0.007,0.143,0.849	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.251:0.766,0.217,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.252:0.765,0.218,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.913:0.001,0.085,0.914	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.539:0.55,0.361,0.089	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.046:0.954,0.045,0
+3	19665222	SNP-3.19663732.	C	A	.	PASS	AR2=0.995;DR2=0.996;AF=0.389	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.114:0.89,0.107,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.091:0.911,0.086,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.155:0.852,0.141,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.951,0.047,0.002	0|0:0.152:0.855,0.139,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.085:0.917,0.08,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.177:0.829,0.165,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.169:0.839,0.154,0.007	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.026:0.975,0.024,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19667063	SNP-3.19665573.	C	A	.	PASS	AR2=0.931;DR2=0.942;AF=0.263	GT:DS:GP	0|0:0:1,0,0	1|0:0.618:0.484,0.415,0.102	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.814:0.338,0.509,0.152	0|0:1.014:0.243,0.499,0.258	1|0:0.758:0.361,0.52,0.119	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.031:0.246,0.476,0.277	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.751:0.358,0.532,0.109	0|0:0:1,0,0	0|0:0.013:0.987,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.881:0.124,0.872,0.004	0|0:0:1,0,0	0|1:0.602:0.399,0.601,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0.123:0.879,0.118,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.977:0,0.022,0.977	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.404:0.634,0.328,0.038	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.302:0.723,0.251,0.026	1|1:2:0,0,1	1|1:1.981:0,0.018,0.982	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.511:0.012,0.464,0.523	1|0:0.712:0.399,0.491,0.11	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.968:0.243,0.547,0.21	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.769:0.326,0.58,0.094	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.785:0.004,0.207,0.789	1|1:1.342:0.132,0.394,0.474	0|1:1.066:0.199,0.535,0.265	1|0:1.086:0.254,0.405,0.34	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.091:0.915,0.08,0.005	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.924:0.263,0.55,0.187	1|1:1.621:0.031,0.317,0.652	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.779:0.002,0.217,0.781	1|1:1.981:0,0.019,0.981	1|0:1.187:0.171,0.472,0.358	1|1:1.124:0.241,0.394,0.365	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.906:0.302,0.489,0.208	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.231:0.058,0.652,0.289	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.895:0.001,0.103,0.896	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.92:0,0.079,0.921	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.801:0.025,0.149,0.826	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.303:0.761,0.175,0.064	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0
+3	19667335	SNP-3.19665845.	A	G	.	PASS	AR2=0.986;DR2=0.989;AF=0.244	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.72:0.02,0.24,0.74	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.101:0.902,0.094,0.003	0|0:0.102:0.899,0.1,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.226:0.79,0.194,0.016	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	1|0:1.316:0.013,0.659,0.329	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.697:0.062,0.179,0.759	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.389:0.632,0.347,0.021	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.981:0,0.019,0.981	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0.089:0.914,0.083,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.785:0.01,0.195,0.795	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19667669	SNP-3.19666179.	C	A	.	PASS	AR2=0.997;DR2=0.997;AF=0.369	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.07:0.93,0.069,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.122:0.885,0.109,0.006	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0.15:0.859,0.133,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.118:0.885,0.112,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.965,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.961:0,0.038,0.961	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.971:0,0.029,0.971	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.966:0,0.033,0.966	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19668515	SNP-3.19667025.	A	G	.	PASS	AR2=0.966;DR2=0.973;AF=0.256	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.96,0.04,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.103:0.897,0.102,0	1|1:2:0,0,1	0|0:0.042:0.959,0.041,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.049:0.952,0.047,0.001	0|0:0:1,0,0	0|0:0.07:0.931,0.068,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.062:0.938,0.062,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.752:0.019,0.211,0.771	1|1:1.621:0.026,0.326,0.648	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.427:0.073,0.426,0.501	1|1:1.708:0.06,0.172,0.768	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.981:0,0.019,0.981	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	1|1:1.698:0.024,0.253,0.722	0|0:0.057:0.943,0.057,0	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.902:0.242,0.614,0.144	1|1:1.907:0.001,0.092,0.908	1|0:1.419:0.08,0.421,0.499	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.034:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.713:0.028,0.231,0.741	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.941,0.058,0.001	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.055:0.946,0.053,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.944,0.055,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.945,0.054,0.002	0|0:0:1,0,0	0|0:0.067:0.933,0.066,0.001	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.815:0.007,0.17,0.822	1|1:1.976:0,0.024,0.976	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.675:0.024,0.277,0.699	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.946,0.053,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.566:0.073,0.287,0.639	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.947,0.049,0.004	1|1:1.56:0.05,0.341,0.609	1|1:2:0,0,1	1|1:1.688:0.028,0.256,0.716	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	19671820	SNP-3.19670330.	A	G	.	PASS	AR2=0.937;DR2=0.952;AF=0.469	GT:DS:GP	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.659:0.45,0.442,0.108	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.862:0.312,0.513,0.174	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.71:0.417,0.457,0.126	0|1:1:0,1,0	1|0:0.663:0.446,0.445,0.109	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:0.675:0.439,0.447,0.114	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:0.652:0.446,0.455,0.098	1|1:1.78:0.011,0.198,0.791	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.847:0.008,0.137,0.855	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.683:0.434,0.449,0.117	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.747:0.017,0.218,0.764	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.97:0,0.03,0.97	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.032,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.868:0.014,0.105,0.881	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.687:0.431,0.45,0.118	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.739:0.4,0.461,0.139	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.754:0.392,0.462,0.146	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0.041:0.959,0.041,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.72:0.41,0.46,0.13	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.754:0.392,0.462,0.146	0|0:0.658:0.45,0.441,0.109	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.538:0.686,0.091,0.224	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.608:0.511,0.37,0.119	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.678:0.437,0.447,0.115	1|1:2:0,0,1	1|0:0.757:0.391,0.46,0.149	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.757:0.391,0.46,0.149	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.684:0.433,0.45,0.117	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.794:0.011,0.184,0.805	1|1:2:0,0,1	1|1:1.724:0.022,0.232,0.746	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.027:0.973,0.027,0	1|1:2:0,0,1
+3	19672105	SNP-3.19670615.	C	A	.	PASS	AR2=0.933;DR2=0.948;AF=0.422	GT:DS:GP	0|0:0.353:0.666,0.315,0.019	1|1:1.935:0.001,0.062,0.936	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.107:0.899,0.094,0.007	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.163:0.844,0.149,0.007	0|0:0:1,0,0	0|0:0.101:0.9,0.1,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.155:0.852,0.142,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0.466:0.582,0.371,0.048	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.944,0.056,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.181:0.827,0.165,0.008	0|0:0:1,0,0	0|0:0.03:0.97,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.157:0.849,0.144,0.006	0|0:0:1,0,0	0|0:0.167:0.841,0.151,0.008	0|0:0.168:0.84,0.153,0.008	0|0:0.147:0.858,0.137,0.005	1|0:0.477:0.558,0.407,0.035	0|0:0.143:0.862,0.134,0.005	0|0:0:1,0,0	0|0:0.683:0.373,0.572,0.056	0|0:0.171:0.837,0.156,0.008	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1.265:0.176,0.382,0.441	1|1:2:0,0,1	0|1:0.864:0.242,0.652,0.106	0|0:0:1,0,0	0|0:0.209:0.802,0.186,0.011	0|0:0:1,0,0	0|0:0.147:0.858,0.137,0.005	0|0:0.455:0.566,0.413,0.021	1|0:0.764:0.324,0.589,0.087	0|0:0.085:0.916,0.083,0.001	0|0:0:1,0,0	1|0:0.847:0.288,0.578,0.134	0|0:0.158:0.848,0.145,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.237:0.775,0.213,0.012	0|0:0.129:0.876,0.119,0.005	0|0:0:1,0,0	0|0:0.226:0.787,0.201,0.013	1|1:2:0,0,1	0|0:0.183:0.825,0.168,0.008	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.938:0.001,0.06,0.939	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1.19:0.078,0.653,0.268	1|1:2:0,0,1	0|1:0.607:0.474,0.446,0.081	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.308:0.096,0.501,0.404	1|1:2:0,0,1	0|0:0.19:0.818,0.173,0.008	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.845:0.009,0.138,0.854	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.347:0.662,0.33,0.008	0|0:0:1,0,0	0|0:0.128:0.876,0.12,0.004	1|1:1.598:0.077,0.247,0.676	1|1:2:0,0,1	0|0:0.149:0.878,0.096,0.026	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.023:0.977,0.022,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.175:0.833,0.159,0.008	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.013:0.988,0.012,0	0|0:0:1,0,0	0|0:0.022:0.979,0.021,0	0|0:0:1,0,0	0|0:0.039:0.962,0.038,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.187:0.822,0.169,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.427:0.152,0.269,0.579	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.164:0.843,0.15,0.007	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.157:0.849,0.145,0.006	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.179:0.829,0.162,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.205:0.806,0.183,0.011	0|0:0:1,0,0	0|0:0.228:0.787,0.199,0.015	0|0:0:1,0,0	0|0:0.185:0.823,0.168,0.008	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.946:0.001,0.052,0.947	1|1:1.95:0.001,0.048,0.951	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.463:0.618,0.3,0.082	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.707:0.305,0.682,0.013	0|0:0.315:0.706,0.273,0.021	0|0:0.24:0.8,0.161,0.039	1|1:1.917:0,0.083,0.917	0|0:0:1,0,0
+3	19672425	SNP-3.19670935.	A	G	.	PASS	AR2=0.902;DR2=0.928;AF=0.502	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.439:0.045,0.472,0.484	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.767:0.016,0.2,0.784	1|0:1.4:0.067,0.465,0.468	1|0:1.283:0.113,0.49,0.396	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.453:0.048,0.452,0.501	1|1:1.38:0.091,0.439,0.47	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.442:0.051,0.455,0.493	1|1:2:0,0,1	1|1:1.694:0.022,0.261,0.716	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.59:0.039,0.332,0.629	1|1:2:0,0,1	1|1:1.637:0.035,0.294,0.672	1|1:1.636:0.036,0.293,0.671	1|1:2:0,0,1	1|1:1.328:0.094,0.484,0.422	0|1:1.39:0.087,0.436,0.477	1|1:1.343:0.129,0.398,0.472	1|1:1.685:0.028,0.259,0.713	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.922:0.302,0.473,0.225	0|1:1.301:0.221,0.257,0.522	0|0:0.363:0.682,0.273,0.045	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.895:0,0.105,0.895	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.387:0.659,0.294,0.046	1|1:1.704:0.019,0.258,0.723	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.632:0.034,0.3,0.666	1|0:1.078:0.206,0.51,0.284	0|1:1.356:0.119,0.406,0.475	0|0:0:1,0,0	1|1:1.888:0.007,0.097,0.895	1|0:1.442:0.075,0.408,0.517	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.592:0.033,0.342,0.625	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.322:0.135,0.408,0.457	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.52:0.547,0.386,0.067	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.704:0.026,0.243,0.73	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.987:0.265,0.482,0.252	0|0:0.366:0.681,0.273,0.046	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.726:0.021,0.232,0.747	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.931:0.002,0.064,0.934	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.815:0.01,0.166,0.825	1|1:1.805:0.011,0.173,0.816	1|1:1.551:0.055,0.339,0.606	1|1:1.826:0.006,0.162,0.832	0|0:0:1,0,0	1|1:1.815:0.004,0.177,0.819	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.74:0.013,0.235,0.752	1|1:1.753:0.021,0.205,0.774	0|0:0:1,0,0	1|1:1.815:0.01,0.164,0.826	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.774:0.016,0.194,0.79	1|1:2:0,0,1	1|1:1.729:0.02,0.23,0.75	0|0:0:1,0,0	1|1:1.697:0.024,0.255,0.721	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.037:0.234,0.495,0.271	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.862:0.006,0.125,0.868	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.561:0.031,0.377,0.592	1|1:1.644:0.034,0.288,0.678	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.93:0.002,0.065,0.933	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.667:0.023,0.286,0.69	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.41:0.097,0.395,0.507	1|1:1.868:0.003,0.127,0.87	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.505:0.066,0.362,0.572	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.699:0.027,0.246,0.726	1|1:2:0,0,1	1|1:1.668:0.029,0.275,0.696	0|0:0:1,0,0	1|1:2:0,0,1
+3	19672940	SNP-3.19671450.	C	A	.	PASS	AR2=0.974;DR2=0.979;AF=0.292	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.695:0.021,0.263,0.716	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.761:0.04,0.159,0.801	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.929:0,0.071,0.929	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.954:0.002,0.041,0.956	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.804:0.01,0.176,0.814	0|0:0.696:0.43,0.445,0.125	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.357:0.131,0.38,0.488	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.184:0.191,0.433,0.375	1|1:1.816:0.01,0.165,0.825	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.202:0.12,0.558,0.322	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.828:0.004,0.164,0.832	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.822:0.008,0.161,0.83	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.565:0.101,0.234,0.665	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.757:0.023,0.196,0.781	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.805:0.01,0.176,0.814	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.834:0.008,0.15,0.842	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19680398	SNP-3.19678908.	A	G	.	PASS	AR2=0.883;DR2=0.901;AF=0.262	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.948:0.281,0.489,0.23	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.138:0.863,0.137,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.81:0.354,0.483,0.164	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.831:0.344,0.482,0.174	1|0:0.77:0.379,0.472,0.149	0|0:1.03:0.24,0.49,0.27	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.744:0.395,0.466,0.139	0|0:0:1,0,0	1|0:0.753:0.389,0.469,0.142	0|1:0.556:0.516,0.411,0.073	1|1:1.573:0.045,0.337,0.618	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.876:0.319,0.486,0.195	0|1:1.011:0.276,0.437,0.287	0|0:0:1,0,0	0|1:0.836:0.337,0.49,0.173	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.332:0.705,0.259,0.036	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.522:0.059,0.359,0.581	0|0:0.606:0.504,0.385,0.11	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.776:0.375,0.475,0.15	0|0:0.487:0.577,0.359,0.064	1|1:1.536:0.054,0.356,0.59	0|1:0.848:0.331,0.491,0.179	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.952:0.278,0.493,0.229	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.123:0.194,0.488,0.317	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.051:0.224,0.5,0.275	1|1:2:0,0,1	0|1:1.05:0.231,0.488,0.281	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.765:0.381,0.473,0.146	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.027:0.244,0.485,0.271	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.124:0.194,0.488,0.318	1|0:1.163:0.157,0.522,0.321	1|0:1.182:0.164,0.49,0.346	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.045:0.227,0.501,0.272	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.675:0.443,0.44,0.118	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.761:0.383,0.472,0.145	1|1:2:0,0,1	0|0:0.743:0.396,0.465,0.139	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.769:0.38,0.471,0.149	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.788:0.366,0.481,0.154	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.139:0.874,0.113,0.013	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.188:0.172,0.467,0.361	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.673:0.445,0.438,0.117	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.698:0.428,0.446,0.126	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.712:0.414,0.46,0.126	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19684618	SNP-3.19683128.	C	A	.	PASS	AR2=0.97;DR2=0.975;AF=0.388	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.25:0.764,0.223,0.013	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.238:0.773,0.216,0.011	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.221:0.788,0.203,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.254:0.763,0.22,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.941,0.054,0.005	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.261:0.754,0.23,0.016	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.257:0.763,0.216,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.108:0.894,0.104,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:0.716:0.409,0.466,0.125	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.843:0.205,0.747,0.048	0|1:1.05:0.023,0.903,0.074	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.159:0.845,0.151,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.118:0.889,0.104,0.007	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.3:0.722,0.255,0.023	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.196:0.811,0.182,0.007	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.052:0.95,0.048,0.002	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.155:0.852,0.142,0.006	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.243:0.772,0.214,0.015	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.072:0.93,0.068,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.09:0.913,0.084,0.003	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.302:0.727,0.244,0.029	0|0:0.18:0.828,0.163,0.008	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.197:0.812,0.179,0.009	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.196:0.813,0.179,0.008	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.305:0.719,0.258,0.023	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.146:0.86,0.134,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.074:0.928,0.069,0.002	0|0:0.039:0.963,0.035,0.002	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0.039:0.963,0.035,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.129:0.876,0.119,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.255:0.762,0.22,0.017	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.206:0.795,0.205,0.001	1|1:1.935:0,0.065,0.935	0|0:0:1,0,0
+3	19684739	SNP-3.19683249.	C	A	.	PASS	AR2=0.987;DR2=0.989;AF=0.334	GT:DS:GP	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.956,0.043,0.001	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.95,0.048,0.001	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.792:0.042,0.124,0.834	1|1:2:0,0,1	0|1:1:0,1,0	0|1:0.873:0.307,0.513,0.18	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:1.822:0.011,0.157,0.832	1|1:2:0,0,1	0|0:0.054:0.946,0.054,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.933:0.002,0.063,0.935	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.93:0.003,0.065,0.933	0|1:1.098:0.079,0.744,0.177	1|1:2:0,0,1	1|1:1.846:0.008,0.137,0.854	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.934:0.001,0.065,0.934	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	1|1:1.663:0.003,0.332,0.666	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.916:0.003,0.078,0.919	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.96,0.04,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.967:0.001,0.031,0.968	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.757:0.017,0.209,0.774	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.096:0.908,0.089,0.004	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19686461	SNP-3.19684971.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.363	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.074:0.927,0.073,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.186:0.823,0.168,0.009	0|0:0.189:0.82,0.171,0.009	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.14:0.865,0.13,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.955,0.044,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.155:0.851,0.143,0.006	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19686821	SNP-3.19685331.	A	G	.	PASS	AR2=0.982;DR2=0.985;AF=0.492	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.698:0.011,0.28,0.709	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.039:0.086,0.789,0.125	1|1:1.877:0.001,0.122,0.877	1|0:1.052:0.194,0.56,0.246	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.959:0,0.04,0.96	1|1:2:0,0,1	1|1:1.821:0.015,0.148,0.836	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.943:0.219,0.618,0.163	1|1:1.856:0.003,0.139,0.859	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.875:0,0.125,0.875	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.879:0.005,0.111,0.884	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.853:0.006,0.135,0.859	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.92:0.002,0.076,0.922	1|0:1.415:0.036,0.514,0.451	0|0:0:1,0,0	1|0:1.518:0.028,0.425,0.547	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.945:0.085,0.885,0.03	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.944:0.001,0.055,0.944	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0,0.032,0.968	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.957:0.001,0.041,0.958	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.985:0,0.015,0.985	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.64:0.012,0.336,0.652	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.899:0.003,0.096,0.901	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.912:0.004,0.081,0.916	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.938:0.001,0.06,0.939	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	19686986	SNP-3.19685496.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.356	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.915:0.004,0.076,0.92	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.918:0.004,0.073,0.923	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19687520	SNP-3.19686030.	C	A	.	PASS	AR2=0.995;DR2=0.996;AF=0.381	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.163:0.837,0.162,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.973:0,0.027,0.973	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.937,0.06,0.003	1|0:1:0,1,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0.055:0.945,0.054,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.038:0.963,0.037,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	0|0:0.143:0.863,0.13,0.007	1|1:1.979:0,0.021,0.979	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.129:0.876,0.12,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.983:0,0.017,0.983	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.099:0.902,0.097,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.191:0.811,0.187,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	19688121	SNP-3.19686631.	C	A	.	PASS	AR2=0.982;DR2=0.987;AF=0.306	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.907:0.002,0.089,0.909	1|1:1.888:0.004,0.105,0.891	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.905:0.002,0.091,0.907	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.96:0.001,0.037,0.962	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.392:0.615,0.378,0.007	0|0:0:1,0,0	1|1:1.765:0.002,0.231,0.767	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.94:0,0.059,0.94	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.919:0.004,0.074,0.922	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.43:0.102,0.366,0.532	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.414:0.059,0.468,0.473	1|1:1.87:0.006,0.118,0.876	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.308:0.103,0.485,0.411	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.894:0.004,0.099,0.897	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.757:0.008,0.227,0.765	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.947:0.001,0.052,0.947	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.939:0.001,0.059,0.94	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.919:0.002,0.076,0.922	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.907:0.002,0.088,0.909	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19688841	SNP-3.19687351.	C	A	.	PASS	AR2=1;DR2=1;AF=0.354	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19690754	SNP-3.19689264.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.356	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.958,0.041,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.147:0.861,0.132,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.889:0.004,0.103,0.893	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.033:0.967,0.032,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.945:0.001,0.053,0.946	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.962,0.037,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19690846	SNP-3.19689356.	A	G	.	PASS	AR2=0.982;DR2=0.987;AF=0.241	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.516:0.021,0.441,0.537	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.895:0.002,0.101,0.897	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.601:0.018,0.363,0.619	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.804:0.019,0.158,0.823	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.969,0.031,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.84:0.003,0.154,0.843	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.935,0.062,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.133:0.882,0.102,0.015	0|0:0:1,0,0	1|1:1.875:0.004,0.117,0.879	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.75:0.05,0.149,0.801	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.355:0.209,0.226,0.564	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19698612	SNP-3.19697122.	A	G	.	PASS	AR2=0.954;DR2=0.967;AF=0.225	GT:DS:GP	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.035:0.965,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.123:0.891,0.095,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.948,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.104:0.899,0.099,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.554:0.044,0.358,0.598	1|1:1.607:0.038,0.317,0.645	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.529:0.059,0.352,0.589	1|1:1.65:0.041,0.268,0.691	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.514:0.063,0.359,0.577	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.599:0.04,0.32,0.64	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.708:0.02,0.252,0.728	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.134:0.87,0.126,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.078:0.928,0.066,0.006	0|0:0:1,0,0	1|1:1.592:0.041,0.326,0.633	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.606:0.038,0.319,0.643	1|1:1.79:0.019,0.172,0.809	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.115:0.89,0.105,0.005	0|0:0.091:0.91,0.089,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.854:0.009,0.127,0.864	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.519:0.061,0.36,0.58	1|1:2:0,0,1	1|1:1.208:0.24,0.313,0.447	0|0:0:1,0,0	1|1:1.86:0.009,0.123,0.868	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.162:0.871,0.096,0.033	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19702588	SNP-3.19701098.	C	A	.	PASS	AR2=0.985;DR2=0.988;AF=0.484	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.651:0.449,0.45,0.101	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.123:0.883,0.111,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.177:0.833,0.158,0.009	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.079:0.921,0.078,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.814:0.003,0.18,0.817	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.973:0,0.026,0.973	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.132:0.869,0.131,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.742:0.3,0.658,0.042	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.14:0.16,0.54,0.3	1|1:2:0,0,1	0|0:0.067:0.934,0.066,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.212:0.014,0.76,0.226	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.044:0.957,0.042,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.971,0.028,0.001	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.128:0.878,0.116,0.006	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.407:0.107,0.378,0.515	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19703781	SNP-3.19702291.	C	A	.	PASS	AR2=0.985;DR2=0.987;AF=0.387	GT:DS:GP	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.192:0.817,0.173,0.009	0|0:0:1,0,0	0|0:0.288:0.733,0.246,0.021	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.223:0.79,0.198,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.215:0.796,0.193,0.011	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0.149:0.856,0.139,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.185:0.826,0.163,0.011	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.18:0.829,0.162,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.148:0.857,0.137,0.006	0|1:1:0,1,0	0|0:0.197:0.812,0.178,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.17:0.837,0.156,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.156:0.851,0.143,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.148:0.857,0.137,0.006	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.13:0.025,0.82,0.155	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.196:0.813,0.177,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.965:0,0.034,0.966	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.124:0.88,0.116,0.004	0|0:0.142:0.863,0.132,0.005	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.119:0.886,0.11,0.004
+3	19704698	SNP-3.19703208.	A	G	.	PASS	AR2=0.948;DR2=0.954;AF=0.188	GT:DS:GP	0|0:0.184:0.825,0.167,0.009	1|1:2:0,0,1	0|0:0.101:0.902,0.095,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.135:0.868,0.128,0.004	1|0:1:0,1,0	0|0:0.189:0.82,0.171,0.009	0|0:0:1,0,0	0|0:0.142:0.862,0.133,0.005	1|1:2:0,0,1	0|0:0.135:0.868,0.128,0.004	0|0:0.183:0.825,0.167,0.008	1|1:2:0,0,1	0|0:0.088:0.914,0.085,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.191:0.819,0.172,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.112:0.891,0.106,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.116:0.89,0.104,0.006	0|0:0.153:0.854,0.139,0.007	0|0:0.131:0.873,0.123,0.004	0|0:0.067:0.934,0.065,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.159:0.847,0.147,0.006	0|0:0.197:0.813,0.177,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.198:0.812,0.177,0.01	0|0:0.029:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.185:0.825,0.166,0.009	0|0:0.081:0.92,0.078,0.001	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.192:0.817,0.174,0.009	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.182:0.826,0.166,0.008	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.195:0.815,0.175,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.107:0.897,0.1,0.003	0|0:0.167:0.839,0.154,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.162:0.845,0.149,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.181:0.827,0.165,0.008	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.162:0.845,0.148,0.007	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.96,0.039,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.146:0.86,0.134,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.04:0.96,0.04,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.107:0.896,0.1,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.145:0.855,0.145,0	0|0:0.185:0.823,0.168,0.009	0|0:0:1,0,0	0|0:0.128:0.878,0.116,0.006	0|0:0.148:0.859,0.135,0.007	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.169:0.838,0.154,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.153:0.853,0.141,0.006	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.202:0.809,0.18,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0.005:0.996,0.004,0	0|0:0:1,0,0	0|0:0.09:0.913,0.084,0.003	0|0:0.11:0.894,0.101,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.11:0.894,0.101,0.005	0|0:0.164:0.843,0.15,0.007	0|0:0:1,0,0	0|0:0.095:0.908,0.088,0.003	0|0:0.116:0.89,0.104,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.122:0.884,0.11,0.006	0|0:0:1,0,0	0|0:0.218:0.798,0.187,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.088:0.915,0.082,0.003	0|0:0.113:0.89,0.106,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19705578	SNP-3.19704088.	A	G	.	PASS	AR2=0.938;DR2=0.95;AF=0.299	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.938:0.284,0.494,0.222	1|1:2:0,0,1	0|1:0.913:0.275,0.537,0.188	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.716:0,0.283,0.717	1|1:2:0,0,1	1|0:1:0,1,0	1|0:0.981:0.245,0.529,0.226	0|0:0:1,0,0	1|0:1.096:0.207,0.49,0.303	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.187:0.824,0.166,0.011	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.07:0.934,0.062,0.004	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.667:0.444,0.444,0.111	0|1:1:0,1,0	0|0:0.712:0.418,0.452,0.13	0|1:0.961:0.321,0.396,0.282	0|1:1.064:0.224,0.488,0.288	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.308:0.72,0.253,0.027	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.878:0,0.122,0.878	0|0:0.693:0.429,0.448,0.122	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.592:0.445,0.519,0.036	0|0:0.009:0.992,0.008,0	1|1:2:0,0,1	1|0:0.976:0.265,0.494,0.241	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.616:0.48,0.423,0.097	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.824:0.346,0.484,0.17	1|1:2:0,0,1	1|0:0.741:0.374,0.511,0.115	0|1:1.116:0.191,0.503,0.306	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.178:0.835,0.153,0.012	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.947,0.052,0.001	0|0:0:1,0,0	1|1:1.654:0.033,0.281,0.686	0|0:0.608:0.486,0.42,0.094	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.614:0.482,0.422,0.096	1|1:2:0,0,1	0|0:0.61:0.485,0.421,0.095	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	19707481	SNP-3.19705991.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.349	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.071:0.023,0.883,0.094	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.249:0.752,0.248,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19716025	SNP-3.19714535.	C	A	.	PASS	AR2=0.972;DR2=0.977;AF=0.394	GT:DS:GP	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.298:0.724,0.253,0.022	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.348:0.677,0.298,0.025	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.292:0.73,0.248,0.022	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:0.309:0.715,0.261,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.234:0.78,0.206,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.269:0.749,0.233,0.018	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	0|0:0.027:0.973,0.027,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.107:0.902,0.09,0.008	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0.127:0.874,0.124,0.001	0|0:0.232:0.78,0.207,0.012	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.2:0.809,0.182,0.009	0|0:0.068:0.934,0.064,0.002	0|0:0:1,0,0	0|0:0.185:0.824,0.167,0.009	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.198:0.817,0.169,0.015	0|0:0:1,0,0	0|0:0.277:0.737,0.248,0.014	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.885:0.001,0.114,0.886	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.255:0.761,0.223,0.016	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.189:0.819,0.172,0.009	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.048:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0.184:0.825,0.166,0.009	0|0:0.197:0.804,0.194,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.308:0.716,0.261,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.293:0.729,0.249,0.022	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.13:0.871,0.128,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.181:0.827,0.166,0.008	0|0:0.04:0.96,0.04,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.273:0.746,0.235,0.019	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.957,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.129:0.874,0.124,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0
+3	19716093	SNP-3.19714603.	C	A	.	PASS	AR2=0.993;DR2=0.994;AF=0.383	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.946:0.264,0.525,0.21	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.072:0.93,0.068,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.104:0.897,0.102,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.067:0.071,0.792,0.138	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.939,0.058,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.162:0.841,0.155,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.945,0.053,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.273:0.745,0.236,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19717564	SNP-3.19716074.	C	A	.	PASS	AR2=0.99;DR2=0.991;AF=0.359	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.046:0.954,0.045,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.08:0.926,0.069,0.005	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.027:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.035:0.966,0.034,0.001	0|0:0.25:0.756,0.237,0.006	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.959,0.04,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.155:0.85,0.145,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.943,0.056,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.932,0.066,0.002	0|0:0:1,0,0	0|0:0.077:0.924,0.074,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.058:0.942,0.057,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.108:0.893,0.106,0.001	1|1:1.748:0,0.252,0.748	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.979:0,0.021,0.979	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.965:0,0.034,0.965	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:1.914:0,0.085,0.915	1|1:1.948:0.001,0.05,0.949	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.137:0.865,0.133,0.002	0|0:0:1,0,0	0|0:0.172:0.829,0.17,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.983:0,0.016,0.983	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.991:0,0.009,0.991	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.962,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	0|0:0.03:0.97,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.951,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.87:0,0.129,0.871	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.855:0.01,0.126,0.865	0|0:0:1,0,0
+3	19717948	SNP-3.19716458.	C	A	.	PASS	AR2=0.995;DR2=0.996;AF=0.345	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.957,0.042,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.941:0.279,0.501,0.22	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.267:0.745,0.243,0.012	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.026:0.975,0.025,0	0|0:0.011:0.989,0.011,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.061:0.94,0.06,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.945,0.054,0.001	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19718204	SNP-3.19716714.	C	A	.	PASS	AR2=0.987;DR2=0.989;AF=0.38	GT:DS:GP	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.162:0.843,0.152,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.082:0.921,0.077,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.116:0.892,0.1,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.138:0.868,0.126,0.006	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.963,0.036,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.06:0.942,0.057,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.152:0.855,0.139,0.007	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.107:0.895,0.103,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.933,0.065,0.002	0|0:0.009:0.992,0.008,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.242:0.773,0.213,0.015	1|1:2:0,0,1	0|0:0.121:0.883,0.113,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.24:0.774,0.211,0.014	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.172:0.836,0.157,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.973:0.105,0.817,0.078	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.283:0.725,0.268,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.196:0.815,0.173,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.1:0.902,0.095,0.003	0|0:0.092:0.909,0.09,0.001	0|0:0.078:0.925,0.073,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19718527	SNP-3.19717037.	C	A	.	PASS	AR2=1;DR2=1;AF=0.35	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.011:0.989,0.011,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19718720	SNP-3.19717230.	C	A	.	PASS	AR2=0.971;DR2=0.98;AF=0.279	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1.372:0.103,0.423,0.475	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.044:0.956,0.044,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.858:0.004,0.134,0.862	1|1:1.655:0.03,0.285,0.685	1|0:1:0,1,0	0|1:1.179:0.115,0.592,0.294	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.573:0.027,0.373,0.6	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.909:0.003,0.086,0.912	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.76:0.017,0.207,0.776	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0.001,0.026,0.973	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.498:0.056,0.39,0.554	0|0:0.052:0.949,0.051,0.001	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.109:0.894,0.103,0.003	1|0:1:0,1,0	0|0:0.041:0.96,0.04,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.965,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.379:0.101,0.418,0.481	1|1:2:0,0,1	1|1:1.933:0.002,0.062,0.936	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.594:0.053,0.299,0.648	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.968,0.032,0	0|0:0.2:0.817,0.167,0.017	0|0:0:1,0,0
+3	19719018	SNP-3.19717528.	C	A	.	PASS	AR2=0.985;DR2=0.988;AF=0.368	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.952,0.048,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.937:0,0.063,0.937	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:1.951:0.001,0.047,0.952	1|1:2:0,0,1	1|1:1.916:0.006,0.073,0.921	1|1:1.912:0,0.088,0.912	1|1:1.545:0.057,0.341,0.602	1|1:1.969:0,0.031,0.969	1|1:1.959:0,0.04,0.96	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.676:0.024,0.276,0.7	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	0|0:0.191:0.824,0.161,0.015	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.937:0.003,0.058,0.939	1|1:1.923:0.003,0.07,0.927	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.181:0.833,0.153,0.014	1|1:1.944:0.001,0.054,0.945	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.84:0.002,0.156,0.842	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.188:0.826,0.159,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.607:0.404,0.586,0.011	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.181:0.834,0.152,0.014	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.083:0.917,0.083,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.172:0.842,0.143,0.014	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.95:0.003,0.044,0.953	0|0:0:1,0,0
+3	19719052	SNP-3.19717562.	C	A	.	PASS	AR2=0.982;DR2=0.987;AF=0.447	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.08:0.921,0.079,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.034:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.666:0.03,0.275,0.696	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.7:0.029,0.242,0.729	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.626:0.036,0.302,0.662	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.159:0.841,0.159,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.276:0.727,0.269,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.634:0.035,0.296,0.669	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.643:0.033,0.29,0.677	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.647:0.03,0.293,0.677	0|0:0.005:0.995,0.005,0	0|0:0.087:0.913,0.087,0	0|0:0:1,0,0	0|0:0.039:0.962,0.037,0.001	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.632:0.036,0.296,0.668	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.668:0.035,0.262,0.703	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.728:0.022,0.228,0.75	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19720745	SNP-3.19719255.	A	G	.	PASS	AR2=0.914;DR2=0.934;AF=0.444	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.146:0.185,0.485,0.33	1|1:1.316:0.14,0.404,0.456	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.229:0.148,0.475,0.377	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.268:0.136,0.46,0.404	1|0:1.14:0.187,0.486,0.327	1|1:2:0,0,1	1|1:2:0,0,1	0|0:1.078:0.213,0.497,0.291	1|1:2:0,0,1	0|1:1.17:0.174,0.482,0.344	0|1:1.463:0.031,0.475,0.494	1|1:1.954:0.001,0.044,0.955	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.431:0.611,0.347,0.042	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.591:0.028,0.352,0.62	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.28:0.111,0.498,0.391	1|0:1.306:0.094,0.506,0.4	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.81:0.005,0.18,0.815	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.86:0.008,0.125,0.867	0|0:0:1,0,0	1|1:1.968:0,0.032,0.968	1|1:2:0,0,1	1|1:1.975:0,0.025,0.975	1|1:1.655:0.027,0.29,0.682	0|0:0.357:0.676,0.29,0.033	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.544:0.047,0.362,0.591	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.019,0.981	1|1:1.462:0.035,0.467,0.498	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.922:0.002,0.074,0.924	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.317:0.708,0.266,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.307:0.717,0.259,0.024	0|0:0.316:0.71,0.265,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.895:0.004,0.097,0.899	1|0:0.779:0.324,0.573,0.103	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.711:0.002,0.286,0.712	0|0:0.986:0.341,0.332,0.327	0|0:0:1,0,0	0|0:0.302:0.721,0.255,0.023	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.135:0.19,0.486,0.325	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.369:0.109,0.414,0.478	1|1:1.786:0.031,0.152,0.817	1|1:2:0,0,1	1|1:1.811:0.01,0.17,0.821	1|1:1.095:0.207,0.491,0.302	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.93:0.003,0.065,0.932	0|0:0:1,0,0	1|1:1.917:0.001,0.081,0.918	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.954:0.001,0.045,0.955	0|0:0:1,0,0	1|1:1.742:0.004,0.25,0.746	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.14:0.187,0.486,0.327	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.972:0,0.027,0.973	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.771:0.008,0.213,0.779	1|1:2:0,0,1	1|1:1.653:0.027,0.293,0.68	0|0:0:1,0,0	1|1:1.86:0.007,0.126,0.867	0|0:0:1,0,0	1|1:1.867:0.006,0.121,0.873	1|0:1.288:0.118,0.476,0.406	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.871:0.003,0.122,0.874	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.889:0.006,0.1,0.894	1|1:1.871:0.005,0.12,0.875	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.899:0.004,0.093,0.903	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0,0.025,0.975	0|0:0.342:0.689,0.28,0.031	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.578:0.015,0.393,0.593	1|1:1.496:0.092,0.319,0.588	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.919:0.006,0.069,0.925	0|0:0.339:0.699,0.263,0.038	0|1:1.261:0.138,0.463,0.399	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19720838	SNP-3.19719348.	C	A	.	PASS	AR2=0.96;DR2=0.974;AF=0.455	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.062:0.938,0.061,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.935,0.064,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.099:0.904,0.093,0.003	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:1.235:0.126,0.514,0.36	0|0:0:1,0,0	0|0:0.128:0.876,0.119,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.088:0.913,0.086,0.001	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.477:0.067,0.389,0.544	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.089:0.913,0.086,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.952,0.048,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.174:0.833,0.16,0.007	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.357:0.099,0.445,0.456	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.444:0.078,0.4,0.522	0|1:1.435:0.08,0.404,0.516	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.297:0.721,0.26,0.019	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.436:0.08,0.403,0.516	0|1:1.441:0.079,0.402,0.519	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.432:0.081,0.405,0.513	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.948,0.051,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.867:0,0.133,0.867	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.202:0.807,0.183,0.01	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.495:0.062,0.38,0.558	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.362:0.683,0.272,0.045	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.27:0.135,0.461,0.405	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.375:0.099,0.426,0.475	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19721419	SNP-3.19719929.	C	A	.	PASS	AR2=0.951;DR2=0.967;AF=0.34	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.363:0.667,0.304,0.03	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.435:0.611,0.343,0.046	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.342:0.688,0.281,0.031	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.426:0.619,0.337,0.044	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.537:0.468,0.527,0.005	0|1:1.087:0.219,0.475,0.306	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.487:0.514,0.485,0.001	0|0:0.37:0.636,0.358,0.006	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.903:0,0.097,0.903	1|1:2:0,0,1	0|0:0.424:0.62,0.337,0.044	1|1:2:0,0,1	0|0:0.064:0.936,0.064,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.358:0.678,0.286,0.036	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.754:0.418,0.411,0.172	0|1:1.207:0.131,0.532,0.338	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.415:0.629,0.327,0.044	0|0:0.55:0.472,0.506,0.022	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:0.428:0.617,0.339,0.044	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0.4:0.642,0.316,0.042	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.44:0.607,0.347,0.046	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.479:0.58,0.361,0.059	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.442:0.605,0.348,0.047	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.146:0.865,0.125,0.01	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.408:0.635,0.322,0.043	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19721460	SNP-3.19719970.	C	A	.	PASS	AR2=0.987;DR2=0.99;AF=0.488	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.281:0.736,0.248,0.016	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.931,0.067,0.001	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.919:0.003,0.076,0.921	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.516:0.013,0.459,0.529	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.853:0.009,0.129,0.862	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.96,0.039,0.001	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.797:0.004,0.195,0.801	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.474:0.537,0.452,0.011	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.927:0.003,0.067,0.93	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.026:0.974,0.026,0	1|1:1.921:0.003,0.073,0.924	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.892:0,0.108,0.892	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.064:0.94,0.057,0.004	0|0:0.285:0.742,0.231,0.027	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.151:0.856,0.137,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.207:0.804,0.186,0.011	0|0:0.185:0.818,0.18,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19721861	SNP-3.19720371.	A	G	.	PASS	AR2=0.997;DR2=0.997;AF=0.279	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.769:0.005,0.22,0.775	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:1.987:0,0.013,0.987	1|1:1.946:0,0.054,0.946	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.952:0,0.048,0.952	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.789:0.045,0.12,0.834	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	19721975	SNP-3.19720485.	C	A	.	PASS	AR2=0.992;DR2=0.993;AF=0.356	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.262:0.747,0.244,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.078:0.925,0.072,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.138:0.866,0.129,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.17:0.839,0.153,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.078:0.922,0.078,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.02:0.98,0.02,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.284:0.727,0.262,0.011	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0.13:0.875,0.12,0.005	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.093:0.909,0.089,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.065:0.937,0.061,0.002	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.119:0.886,0.109,0.005	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.929,0.069,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.072:0.017,0.895,0.089	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.136:0.867,0.129,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.939,0.059,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19722889	SNP-3.19721399.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.358	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.96,0.04,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.808:0.001,0.19,0.809	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19723107	SNP-3.19721617.	A	G	.	PASS	AR2=0.994;DR2=0.995;AF=0.257	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.961,0.039,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.238:0,0.761,0.238	1|0:0.998:0.006,0.989,0.005	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.701:0,0.299,0.701	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.968,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.936,0.064,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.691:0,0.309,0.691	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.043:0.957,0.043,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.962,0.036,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1
+3	19723127	SNP-3.19721637.	C	A	.	PASS	AR2=0.844;DR2=0.887;AF=0.223	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.233:0.781,0.206,0.014	0|0:0:1,0,0	1|0:1.068:0.212,0.507,0.28	0|0:0.864:0.396,0.344,0.26	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.686:0.431,0.452,0.117	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.765:0.383,0.469,0.148	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.2:0.815,0.17,0.015	0|1:0.725:0.409,0.457,0.134	1|1:2:0,0,1	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.098:0.163,0.577,0.261	1|1:2:0,0,1	1|0:1.053:0.23,0.488,0.283	0|0:0.789:0.37,0.472,0.158	1|0:1.334:0.125,0.417,0.459	1|1:2:0,0,1	0|0:0.259:0.768,0.206,0.026	0|0:0:1,0,0	0|1:0.598:0.506,0.39,0.104	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.8:0.353,0.495,0.153	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.57:0.512,0.405,0.082	0|0:0.493:0.568,0.371,0.061	0|0:0.479:0.577,0.368,0.055	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.203:0.82,0.157,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.571:0.512,0.406,0.083	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.516:0.551,0.382,0.067	0|0:0:1,0,0	0|0:0.475:0.581,0.363,0.056	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.53:0.54,0.39,0.07	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0.499:0.564,0.374,0.063	0|0:0:1,0,0	0|0:0.509:0.557,0.378,0.065	1|1:2:0,0,1	0|0:0.423:0.626,0.325,0.049	0|0:0.51:0.555,0.379,0.066	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.323:0.714,0.249,0.037	0|0:0.094:0.911,0.083,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.228:0.785,0.201,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.514:0.553,0.38,0.067	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.221:0.791,0.197,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.13:0.876,0.118,0.006	0|0:0.195:0.815,0.175,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.579:0.506,0.41,0.085	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.264:0.027,0.681,0.291	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.493:0.568,0.371,0.061	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.451:0.598,0.353,0.049	0|0:0:1,0,0	0|0:0.491:0.57,0.37,0.061	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.705:0.008,0.279,0.713	0|0:0:1,0,0	1|0:0.775:0.377,0.471,0.152	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.787:0.37,0.472,0.158	0|0:0.491:0.57,0.37,0.061	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.234:0.78,0.207,0.014	0|0:0:1,0,0	1|1:1.579:0.042,0.338,0.62	1|0:0.789:0.369,0.472,0.158	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.781:0.385,0.449,0.166	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.572:0.515,0.397,0.088	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.91:0.343,0.404,0.253	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.506:0.559,0.377,0.065
+3	19723998	SNP-3.19722508.	A	G	.	PASS	AR2=0.978;DR2=0.981;AF=0.247	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.812:0.012,0.163,0.825	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.848:0.009,0.134,0.857	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.062:0.94,0.058,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.151:0.857,0.136,0.008	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.939,0.059,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.096:0.904,0.095,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.86:0.336,0.468,0.196	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.141:0.861,0.137,0.002	0|0:0.257:0.76,0.223,0.017	0|0:0.212:0.791,0.205,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.038:0.963,0.036,0.001	0|0:0.258:0.742,0.258,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.172:0.828,0.172,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.067:0.935,0.062,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.224:0.788,0.2,0.012	0|0:0:1,0,0	0|0:0.281:0.74,0.239,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.864:0.007,0.121,0.871	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.175:0.829,0.167,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.264:0.754,0.228,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.935,0.063,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.248:0.768,0.215,0.017	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19724422	SNP-3.19722932.	A	G	.	PASS	AR2=0.924;DR2=0.944;AF=0.251	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.364:0.093,0.449,0.457	0|0:0:1,0,0	1|0:0.913:0.231,0.625,0.144	0|0:0:1,0,0	1|0:1.041:0.282,0.395,0.323	0|0:0.318:0.707,0.269,0.025	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.386:0.635,0.343,0.022	0|0:0:1,0,0	1|1:1.432:0.079,0.41,0.511	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.15:0.403,0.043,0.553	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.162:0.182,0.474,0.344	1|1:2:0,0,1	0|1:0.895:0.337,0.432,0.231	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.472:0.582,0.364,0.054	0|0:0.436:0.597,0.369,0.034	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.743:0.345,0.567,0.088	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.972,0.027,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.019:0.064,0.852,0.084	1|0:0.999:0.063,0.876,0.062	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.867:0.212,0.71,0.079	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.333:0.043,0.581,0.376	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.89:0.003,0.103,0.893	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.062:0.943,0.053,0.005	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.803:0.369,0.458,0.173	0|0:0:1,0,0	0|0:0.2:0.813,0.174,0.013	0|1:0.346:0.685,0.285,0.031	1|1:2:0,0,1	0|0:0.172:0.841,0.147,0.013	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.347:0.062,0.53,0.408	0|0:0:1,0,0	0|1:1.021:0.044,0.892,0.064	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.315:0.715,0.255,0.03	1|1:1.879:0.004,0.113,0.883	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.48:0.572,0.377,0.051	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.414:0.64,0.307,0.054	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.622:0.495,0.388,0.117	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.209:0.804,0.183,0.013	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.431:0.629,0.31,0.06	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19724860	SNP-3.19723370.	A	G	.	PASS	AR2=0.975;DR2=0.979;AF=0.393	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.186:0.061,0.691,0.248	0|0:0:1,0,0	1|1:1.778:0.013,0.195,0.791	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.877:0.006,0.111,0.883	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.779:0.015,0.192,0.793	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.928:0.002,0.068,0.93	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	1|1:1.802:0.009,0.18,0.811	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.793:0.011,0.186,0.803	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.029:0.971,0.029,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.785:0.01,0.195,0.795	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.795:0.009,0.187,0.804	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.88:0.004,0.111,0.884	1|1:1.849:0.007,0.138,0.856	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:1.852:0.006,0.135,0.859	1|1:1.706:0.018,0.258,0.724	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.169:0.111,0.61,0.279	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.078:0.092,0.737,0.171	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.83:0.009,0.152,0.839	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.289:0.741,0.229,0.03	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.831:0.009,0.152,0.84	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.843:0.007,0.143,0.85	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.692:0.03,0.249,0.721	1|1:1.786:0.009,0.195,0.796	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.019:0.129,0.723,0.148	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.435:0.651,0.263,0.086	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19725751	SNP-3.19724261.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.209	GT:DS:GP	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.104:0.9,0.096,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.068:0.934,0.064,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19727065	SNP-3.19725575.	C	A	.	PASS	AR2=0.961;DR2=0.972;AF=0.349	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.049:0.951,0.049,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.038:0.963,0.036,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.964,0.036,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.793:0.212,0.782,0.005	0|0:0.047:0.954,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.963,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.968,0.032,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.14:0.861,0.137,0.002	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.071:0.93,0.069,0.001	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.404:0.097,0.402,0.501	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|0:1:0,1,0	1|1:1.862:0.008,0.123,0.87	1|1:1.886:0.006,0.102,0.892	0|1:1.404:0.097,0.402,0.501	1|0:1.284:0.132,0.452,0.416	1|1:2:0,0,1	1|1:1.862:0.01,0.119,0.871	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.649:0,0.35,0.65	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.066:0.936,0.061,0.003	1|1:2:0,0,1	0|0:0.081:0.919,0.081,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.935:0,0.065,0.935	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.607:0.013,0.366,0.621	1|1:1.772:0,0.228,0.772	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.382:0.661,0.297,0.043	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.081:0.92,0.08,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.162:0.271,0.297,0.433	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0.054:0.947,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.234:0.8,0.165,0.034	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.684:0.411,0.493,0.096	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.877:0.005,0.113,0.882	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.329:0.671,0.329,0	1|0:1.262:0.142,0.455,0.403	0|0:0:1,0,0
+3	19727730	SNP-3.19726240.	C	A	.	PASS	AR2=0.978;DR2=0.984;AF=0.359	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.163:0.841,0.154,0.005	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.009:0.337,0.317,0.346	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.072:0.929,0.071,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.769:0.012,0.208,0.781	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.793:0.339,0.53,0.132	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.294:0.104,0.498,0.398	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.088:0.912,0.087,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.532:0.561,0.347,0.092	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.982:0.238,0.542,0.22	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.875:0.321,0.482,0.196	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19731749	SNP-3.19730259.	A	G	.	PASS	AR2=0.952;DR2=0.96;AF=0.305	GT:DS:GP	1|1:1.695:0.016,0.274,0.711	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.962:0.117,0.804,0.079	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.764:0.014,0.207,0.779	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.811:0.011,0.167,0.822	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.751:0.015,0.218,0.767	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.833:0.008,0.151,0.841	1|1:1.561:0.024,0.391,0.585	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.509:0.03,0.431,0.539	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.795:0.011,0.183,0.806	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.47:0.052,0.426,0.522	1|1:1.724:0.024,0.228,0.748	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.152:0.027,0.793,0.18	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|0:1.292:0.123,0.463,0.415	1|0:0.911:0.302,0.486,0.213	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.251:0.757,0.235,0.008	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.733:0.392,0.484,0.124	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.593:0.415,0.577,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.967:0.099,0.836,0.066	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.1:0.906,0.088,0.006	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.826:0.007,0.16,0.833	1|1:1.734:0.031,0.204,0.765	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.183:0.844,0.13,0.026	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.794:0.011,0.185,0.805	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.793:0.011,0.184,0.804	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.8:0.011,0.179,0.811	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.801:0.01,0.18,0.81	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.627:0.065,0.242,0.693	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.969,0.03,0	1|1:1.785:0.012,0.19,0.797	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.838:0.008,0.145,0.846	1|1:1.823:0.01,0.157,0.833	1|1:1.854:0.008,0.131,0.862	1|1:1.772:0.014,0.2,0.786	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.84:0.008,0.144,0.848	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.786:0.013,0.189,0.798	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.781:0.012,0.194,0.794	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.837:0.008,0.147,0.845	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1
+3	19731783	SNP-3.19730293.	C	A	.	PASS	AR2=0.988;DR2=0.991;AF=0.317	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.448:0.572,0.408,0.02	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.058:0.944,0.054,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.758:0.013,0.216,0.771	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.134:0.055,0.757,0.189	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.62:0.482,0.415,0.103	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.811:0.36,0.469,0.171	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.1:0.903,0.094,0.003	0|0:0:1,0,0
+3	19732132	SNP-3.19730642.	C	A	.	PASS	AR2=0.982;DR2=0.986;AF=0.272	GT:DS:GP	0|0:0:1,0,0	1|1:1.774:0.014,0.198,0.788	0|0:0:1,0,0	1|1:1.684:0.023,0.269,0.708	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.81:0.008,0.174,0.818	1|1:1.857:0.007,0.129,0.864	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.019:0.981,0.018,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.977:0.001,0.022,0.978	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.958:0.001,0.041,0.959	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.884:0.007,0.102,0.891	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.76:0.016,0.208,0.776	1|1:1.72:0.017,0.246,0.737	1|1:2:0,0,1	1|1:1.646:0.033,0.288,0.679	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:0.884:0.169,0.779,0.052	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.652:0.034,0.28,0.686	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.728:0.018,0.235,0.746	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.722:0.017,0.243,0.74	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.939:0.004,0.054,0.942	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19734634	SNP-3.19733144.	C	A	.	PASS	AR2=0.985;DR2=0.987;AF=0.437	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.983:0,0.017,0.983	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.772:0.017,0.195,0.789	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.124:0.876,0.123,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.954:0.002,0.043,0.956	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.807:0.004,0.185,0.811	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.095:0.176,0.552,0.271	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.051:0.205,0.538,0.257	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.424:0.045,0.486,0.469	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.226:0.147,0.48,0.373	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.135:0.16,0.546,0.294	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.026:0.246,0.482,0.272	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19735124	SNP-3.19733634.	C	A	.	PASS	AR2=0.977;DR2=0.982;AF=0.222	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.022:0.978,0.022,0	0|0:0.166:0.842,0.151,0.007	0|0:0:1,0,0	0|0:0.251:0.766,0.218,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.148:0.858,0.136,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.732:0.27,0.728,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.963,0.037,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.957,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.962,0.037,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.935,0.062,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.684:0.029,0.257,0.714	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.386:0.638,0.337,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.77:0.01,0.209,0.78	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.909:0.241,0.609,0.15	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.325:0.112,0.451,0.437	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.309:0.727,0.237,0.036	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.019,0.98	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0.03:0.97,0.03,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.951:0,0.048,0.951	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.874:0.003,0.12,0.877	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.185:0.822,0.171,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19735146	SNP-3.19733656.	A	G	.	PASS	AR2=0.993;DR2=0.995;AF=0.253	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.908:0.001,0.09,0.909	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.027,0.973	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.151:0.857,0.134,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.418:0.583,0.417,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.146:0.861,0.131,0.008	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.161:0.847,0.145,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.148:0.86,0.132,0.008	1|1:2:0,0,1
+3	19741750	SNP-3.19740260.	C	A	.	PASS	AR2=0.966;DR2=0.976;AF=0.431	GT:DS:GP	0|0:0.065:0.936,0.064,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.055:0.947,0.051,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.236:0.781,0.201,0.017	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.155:0.852,0.14,0.007	0|0:0:1,0,0	0|0:0.198:0.821,0.161,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.18:0.83,0.16,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.928:0.004,0.064,0.932	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.631:0.474,0.42,0.105	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.042:0.138,0.683,0.179	0|0:0.376:0.66,0.304,0.036	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.522:0.54,0.397,0.062	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.445:0.602,0.352,0.047	0|0:0.324:0.702,0.272,0.026	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.453:0.592,0.363,0.045	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.274:0.009,0.707,0.283	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.36:0.675,0.289,0.035	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.766:0.015,0.204,0.781	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.585:0.48,0.456,0.064	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.812:0.011,0.165,0.824	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.363:0.675,0.287,0.038	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.012,0.988	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.392:0.653,0.302,0.045	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	0|0:0.361:0.678,0.284,0.038	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	19744116	SNP-3.19742626.	C	A	.	PASS	AR2=0.974;DR2=0.98;AF=0.362	GT:DS:GP	0|0:0.071:0.93,0.07,0.001	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.153:0.856,0.135,0.009	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.956,0.043,0.001	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.302:0.701,0.296,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.948,0.051,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0.076:0.926,0.072,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.841:0.007,0.144,0.849	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.726:0.003,0.269,0.729	1|0:1.039:0.088,0.785,0.127	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.827:0.006,0.162,0.832	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.77:0.008,0.214,0.778	1|1:1.822:0.005,0.168,0.827	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.524:0.493,0.49,0.017	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.154:0.001,0.845,0.155	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.105:0.002,0.892,0.106	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.75:0.007,0.236,0.757	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.139:0.046,0.769,0.185	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.58:0.004,0.413,0.584	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.119:0.881,0.119,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.281:0.03,0.66,0.31	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.059:0.943,0.056,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.643:0.017,0.324,0.66	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.963,0.036,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.602:0.029,0.34,0.631	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.584:0.026,0.364,0.61	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.835:0.008,0.148,0.844	0|0:0:1,0,0
+3	19744886	SNP-3.19743396.	A	G	.	PASS	AR2=0.811;DR2=0.841;AF=0.265	GT:DS:GP	0|1:0.705:0.416,0.463,0.121	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.685:0.418,0.479,0.103	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.329:0.696,0.278,0.025	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.944:0.266,0.524,0.21	1|1:1.847:0.028,0.096,0.875	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.447:0.618,0.317,0.065	0|1:1.305:0.122,0.45,0.427	0|0:0.449:0.593,0.366,0.041	0|1:1.25:0.139,0.472,0.389	1|1:1.333:0.112,0.443,0.445	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.585:0.031,0.354,0.615	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.435:0.605,0.356,0.04	0|0:0.318:0.686,0.311,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.631:0.446,0.477,0.077	0|0:0.796:0.364,0.477,0.16	0|0:0.835:0.343,0.48,0.177	0|0:0:1,0,0	0|0:0.817:0.351,0.481,0.168	1|0:0.829:0.346,0.48,0.175	0|0:0:1,0,0	0|1:0.82:0.351,0.478,0.171	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.811:0.352,0.485,0.163	0|0:0:1,0,0	1|0:0.748:0.393,0.466,0.141	1|1:0.827:0.343,0.487,0.17	0|0:0.239:0.761,0.239,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.712:0.411,0.466,0.123	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.808:0.352,0.489,0.16	0|1:0.748:0.393,0.466,0.141	0|1:0.773:0.378,0.471,0.151	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.404:0.599,0.399,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.746:0.393,0.469,0.139	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.718:0.407,0.468,0.125	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.719:0.409,0.462,0.129	0|0:0:1,0,0	0|1:0.948:0.266,0.519,0.214	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.959:0.267,0.507,0.226	0|0:0:1,0,0	0|0:0.747:0.394,0.465,0.141	1|0:1.287:0.127,0.459,0.414	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.759:0.019,0.202,0.778	1|0:0.748:0.393,0.465,0.141	0|0:0:1,0,0	1|0:0.861:0.325,0.49,0.186	0|1:0.959:0.263,0.514,0.222	0|0:0:1,0,0	0|1:0.782:0.372,0.474,0.154	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.512:0.051,0.386,0.563	0|0:0:1,0,0	1|1:1.667:0.028,0.278,0.694	1|1:1.499:0.057,0.387,0.556	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.206:0.816,0.161,0.023	0|1:1.356:0.105,0.434,0.461	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.755:0.389,0.468,0.143	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.808:0.357,0.479,0.164	0|0:0.747:0.394,0.465,0.141	0|0:0:1,0,0	0|0:0.039:0.961,0.039,0	0|0:0.656:0.471,0.402,0.127	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.77:0.307,0.616,0.077	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.755:0.389,0.468,0.144	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.686:0.421,0.472,0.107	0|0:0:1,0,0	1|0:0.825:0.346,0.484,0.17	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.7:0.024,0.252,0.724	0|0:0:1,0,0	1|1:1.772:0.018,0.192,0.79	0|1:0.857:0.332,0.478,0.19	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.771:0.379,0.47,0.151	1|1:1.513:0.066,0.354,0.579	1|1:2:0,0,1	1|0:0.898:0.324,0.455,0.222	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.308:0.722,0.249,0.029	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:0.772:0.379,0.471,0.151	0|0:0.849:0.333,0.484,0.182	1|1:2:0,0,1	0|1:0.756:0.389,0.467,0.144	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.973:0,0.027,0.973	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.523:0.576,0.324,0.099	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.652:0.419,0.509,0.072	0|0:0:1,0,0	1|0:0.796:0.361,0.482,0.157
+3	19747751	SNP-3.19746261.	C	A	.	PASS	AR2=0.989;DR2=0.99;AF=0.319	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.182:0.17,0.478,0.352	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.128:0.19,0.492,0.318	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.889:0.21,0.691,0.099	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.817:0.274,0.635,0.091	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.156:0.179,0.485,0.336	0|0:0:1,0,0
+3	19747918	SNP-3.19746428.	C	A	.	PASS	AR2=0.981;DR2=0.987;AF=0.384	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.083:0.921,0.075,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.092:0.911,0.086,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.729:0.023,0.225,0.752	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.822:0.203,0.772,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.364:0.109,0.417,0.473	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.349:0.105,0.44,0.455	1|0:1.108:0.036,0.821,0.144	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.246:0.084,0.586,0.33	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.146:0.027,0.799,0.173	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.989:0.081,0.848,0.071	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.335:0.122,0.421,0.457	0|0:0:1,0,0
+3	19751038	SNP-3.19749548.	C	A	.	PASS	AR2=0.979;DR2=0.985;AF=0.33	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.317:0.126,0.431,0.443	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.035:0.032,0.901,0.067	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.017:0.157,0.669,0.174	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.354:0.107,0.432,0.461	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.222:0.103,0.571,0.326	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.204:0.009,0.778,0.213	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.887:0.164,0.786,0.051	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.626:0.405,0.564,0.031	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.811:0.235,0.719,0.046	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.285:0.143,0.43,0.428	0|0:0:1,0,0
+3	19762971	SNP-3.19761481.	A	G	.	PASS	AR2=0.969;DR2=0.978;AF=0.252	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.914:0.002,0.082,0.916	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.899:0.104,0.894,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.055:0.947,0.052,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.246:0.758,0.239,0.004	0|1:0.794:0.213,0.779,0.007	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.661:0.342,0.655,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.077:0.924,0.074,0.001	0|0:0.086:0.916,0.081,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.945,0.054,0.001	0|0:0.076:0.926,0.073,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.129:0.133,0.605,0.262	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.175:0.828,0.169,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.893:0.003,0.102,0.895	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.703:0.451,0.395,0.154	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.082:0.918,0.082,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.364:0.638,0.36,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.91:0.004,0.083,0.914	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.37:0.662,0.306,0.032	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.546:0.556,0.343,0.101	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.624:0.493,0.39,0.117	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.943,0.055,0.001	1|1:2:0,0,1
+3	19763222	SNP-3.19761732.	A	G	.	PASS	AR2=0.964;DR2=0.969;AF=0.227	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.971:0,0.029,0.971	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.933:0.002,0.064,0.934	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.98:0,0.019,0.98	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.329:0.045,0.581,0.374	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.9:0.003,0.094,0.903	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.037:0.964,0.035,0.001	0|0:0:1,0,0	0|0:0.031:0.97,0.029,0.001	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.137:0.868,0.127,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.155:0.852,0.142,0.006	0|0:0:1,0,0	0|0:0.156:0.85,0.143,0.006	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.24:0.76,0.24,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.165:0.842,0.151,0.007	0|0:0.187:0.821,0.171,0.008	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.138:0.867,0.128,0.005	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.133:0.873,0.121,0.006	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.246:0.761,0.231,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.082:0.92,0.078,0.002	0|0:0.037:0.963,0.037,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.944,0.055,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.159:0.848,0.146,0.006	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.279:0.743,0.235,0.022	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.146:0.859,0.135,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.161:0.846,0.148,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.339:0.693,0.276,0.032	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.957:0.001,0.041,0.958	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.925:0.001,0.073,0.926	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.849:0.007,0.137,0.856	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.32:0.684,0.313,0.004	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.182:0.826,0.165,0.008	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.939:0.001,0.058,0.94	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.135:0.87,0.126,0.005	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.912:0.003,0.082,0.915	0|0:0.137:0.868,0.127,0.005	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.851:0.008,0.133,0.859	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.975,0.024,0.001	0|0:0.135:0.87,0.126,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.953:0.249,0.549,0.202	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19764705	SNP-3.19763215.	C	A	.	PASS	AR2=0.992;DR2=0.994;AF=0.348	GT:DS:GP	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.23:0.772,0.226,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.963,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.951:0.001,0.047,0.952	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.75:0.015,0.22,0.765	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.979:0,0.021,0.979	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.521:0.583,0.313,0.104	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.671:0.007,0.316,0.678	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.934:0.001,0.064,0.935	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19765552	SNP-3.19764062.	A	G	.	PASS	AR2=0.978;DR2=0.982;AF=0.263	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.084:0.92,0.076,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.874:0.004,0.117,0.879	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.882:0.003,0.111,0.886	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.93:0.084,0.901,0.014	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.527:0.051,0.371,0.578	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.137:0.864,0.135,0.001	0|0:0:1,0,0	0|0:0.458:0.551,0.439,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.972,0.028,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0.001,0.999,0.001	0|1:0.729:0.29,0.69,0.019	0|0:0:1,0,0	1|0:1.137:0.142,0.58,0.279	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.363:0.637,0.363,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.131:0.193,0.483,0.324	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.018,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.787:0.001,0.212,0.788	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.215:0.013,0.76,0.228	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.863:0.005,0.126,0.868	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.886:0.003,0.108,0.889	0|0:0:1,0,0	0|0:0.045:0.958,0.04,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19766171	SNP-3.19764681.	C	A	.	PASS	AR2=0.958;DR2=0.968;AF=0.283	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:0.964:0.247,0.543,0.21	0|0:0:1,0,0	1|1:1.777:0.008,0.206,0.785	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.596:0.044,0.317,0.639	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.922:0.101,0.877,0.023	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	0|0:0.356:0.651,0.343,0.006	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.109:0.137,0.617,0.246	1|1:2:0,0,1	1|1:1.416:0.034,0.516,0.45	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.601:0.04,0.319,0.641	1|1:1.556:0.047,0.351,0.602	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.137:0.863,0.137,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.912:0.004,0.081,0.916	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.802:0.199,0.801,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.061:0.94,0.059,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.622:0.025,0.328,0.647	1|1:1.212:0.17,0.447,0.382	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.412:0.073,0.442,0.485	1|1:2:0,0,1	1|0:1.202:0.087,0.625,0.289	1|1:1.494:0.034,0.438,0.528	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.986:0,0.013,0.986	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.111:0.894,0.101,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.841:0.002,0.154,0.843	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.831:0.004,0.162,0.834	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.328:0.699,0.274,0.027	0|0:0:1,0,0	1|1:1.065:0.214,0.507,0.279	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.4:0.053,0.493,0.454	0|0:0:1,0,0
+3	19767442	SNP-3.19765952.	C	A	.	PASS	AR2=0.96;DR2=0.968;AF=0.269	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.079:0.922,0.076,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.43:0.018,0.533,0.448	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.913:0.01,0.068,0.922	1|0:0.673:0.335,0.658,0.008	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.352:0.109,0.43,0.461	1|1:2:0,0,1	1|0:1.172:0.165,0.497,0.338	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.25:0.147,0.456,0.397	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.229:0.771,0.229,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.302:0.127,0.443,0.43	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:1.703:0.019,0.26,0.721	1|1:1.95:0.001,0.047,0.951	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|0:1.42:0.06,0.46,0.48	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.889:0.002,0.107,0.891	0|0:0:1,0,0	1|0:1.098:0.215,0.472,0.313	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.012:0.988,0.012,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.119:0.238,0.406,0.356	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.955,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.935:0.003,0.059,0.938	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.462:0.074,0.391,0.536	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.156:0.184,0.476,0.34	1|1:1.057:0.253,0.437,0.31	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19770398	SNP-3.19768908.	C	A	.	PASS	AR2=0.99;DR2=0.993;AF=0.337	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.074:0.005,0.917,0.079	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.409:0.618,0.355,0.027	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.662:0.003,0.332,0.665	1|1:2:0,0,1	1|1:1.547:0.009,0.434,0.556	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.905:0.001,0.093,0.906	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.426:0.574,0.425,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1.274:0.018,0.689,0.293	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19777683	SNP-3.19776193.	A	G	.	PASS	AR2=0.984;DR2=0.986;AF=0.251	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.928,0.064,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.882:0.004,0.111,0.886	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.904:0.003,0.09,0.907	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.019:0.072,0.837,0.091	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.859:0.001,0.139,0.86	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:0.651:0.354,0.642,0.004	0|1:0.913:0.152,0.783,0.065	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.108:0.171,0.551,0.278	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.044:0.957,0.042,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.192:0.159,0.49,0.351	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.016:0.984,0.015,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.865:0.004,0.126,0.87	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.883:0.003,0.111,0.886	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.907:0.002,0.089,0.909	1|1:1.875:0.004,0.117,0.879	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.948,0.052,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19777886	SNP-3.19776396.	A	G	.	PASS	AR2=0.898;DR2=0.928;AF=0.234	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.571:0.522,0.386,0.093	1|1:1.235:0.189,0.386,0.424	0|0:0:1,0,0	0|0:0.198:0.813,0.176,0.011	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.947,0.053,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.6:0.496,0.409,0.096	1|1:2:0,0,1	0|0:0.45:0.598,0.355,0.048	0|0:0.5:0.564,0.373,0.063	1|1:1.377:0.127,0.37,0.503	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.224:0.789,0.198,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.268:0.75,0.232,0.018	0|0:0.246:0.769,0.215,0.015	1|1:2:0,0,1	0|0:0.235:0.779,0.207,0.014	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.238:0.776,0.209,0.015	1|1:2:0,0,1	0|0:0.249:0.767,0.218,0.016	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.26:0.757,0.225,0.017	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.224:0.789,0.198,0.013	0|0:0:1,0,0	0|0:0.189:0.821,0.168,0.01	0|0:0.223:0.789,0.198,0.013	0|0:0.045:0.955,0.044,0	0|0:0:1,0,0	0|0:0.487:0.579,0.355,0.066	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.363:0.653,0.331,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.325:0.699,0.277,0.024	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.489:0.583,0.344,0.073	0|0:0.258:0.745,0.251,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.241:0.779,0.201,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.552:0.52,0.407,0.073	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.181:0.826,0.166,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.599:0.006,0.388,0.606	1|1:1.832:0.009,0.15,0.841	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.141:0.863,0.132,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.544:0.532,0.392,0.076	0|0:0.037:0.963,0.037,0	0|0:0:1,0,0	0|0:0.241:0.771,0.217,0.012	0|0:0:1,0,0	0|0:0.226:0.787,0.2,0.013	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.227:0.786,0.201,0.013	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.608:0.488,0.415,0.096	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.765:0.383,0.468,0.149	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.485:0.574,0.366,0.06	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.249:0.766,0.219,0.015	0|0:0:1,0,0	0|0:0.119:0.896,0.089,0.015	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.058:0.942,0.057,0.001	0|0:0.618:0.476,0.43,0.094	1|0:0.96:0.302,0.437,0.261	0|0:0.255:0.762,0.222,0.016	1|1:2:0,0,1	0|0:0.221:0.791,0.196,0.013	0|0:0.219:0.788,0.206,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.199:0.825,0.151,0.024	0|0:0.137:0.866,0.132,0.002	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19777977	SNP-3.19776487.	C	A	.	PASS	AR2=0.966;DR2=0.973;AF=0.39	GT:DS:GP	0|0:0.157:0.85,0.143,0.007	1|1:2:0,0,1	0|0:0.094:0.908,0.089,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.042:0.958,0.042,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.085:0.917,0.081,0.002	0|0:0.105:0.9,0.094,0.006	0|1:0.597:0.431,0.541,0.028	1|0:1:0,1,0	0|0:0.199:0.817,0.167,0.016	1|1:2:0,0,1	0|0:0.061:0.94,0.059,0.001	0|0:0.231:0.804,0.16,0.035	1|1:2:0,0,1	0|0:0.015:0.986,0.014,0	0|0:0.051:0.95,0.048,0.001	0|0:0.033:0.968,0.031,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.958,0.041,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.947,0.051,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0.104:0.9,0.097,0.004	0|0:0.128:0.877,0.118,0.005	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.127:0.877,0.118,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.13:0.874,0.121,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.123:0.881,0.114,0.005	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.13:0.875,0.121,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.134:0.871,0.124,0.005	0|0:0.129:0.875,0.121,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.542:0.573,0.311,0.115	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.018:0.982,0.018,0	1|1:2:0,0,1	0|0:0.146:0.859,0.136,0.005	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.522:0.019,0.44,0.541	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.358:0.66,0.321,0.019	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.651:0.003,0.344,0.654	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.122:0.882,0.113,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.159:0.08,0.68,0.239	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.079:0.922,0.077,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.958,0.042,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.232:0.783,0.201,0.015	0|1:0.781:0.391,0.437,0.172	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.122:0.883,0.113,0.005	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0.349:0.663,0.325,0.012	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.26:0.753,0.234,0.013	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.39:0.008,0.595,0.397	0|0:0:1,0,0	0|0:0.093:0.907,0.093,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19778078	SNP-3.19776588.	C	A	.	PASS	AR2=0.955;DR2=0.964;AF=0.419	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.136:0.866,0.131,0.003	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.252:0.774,0.2,0.026	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.198:0.812,0.178,0.01	0|0:0:1,0,0	0|0:0.199:0.81,0.18,0.01	0|0:0:1,0,0	0|0:0.044:0.957,0.042,0.001	0|0:0.258:0.76,0.222,0.018	0|0:0.319:0.699,0.282,0.019	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.26:0.757,0.226,0.017	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.304:0.719,0.258,0.023	0|0:0.309:0.715,0.261,0.024	0|0:0.3:0.722,0.255,0.022	0|0:0:1,0,0	0|0:0.303:0.72,0.257,0.023	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.018:0.983,0.017,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.179:0.826,0.169,0.005	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:1.556:0.012,0.421,0.568	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.308:0.716,0.26,0.024	0|0:0.006:0.994,0.006,0	0|0:0.001:0.999,0.001,0	1|0:0.354:0.677,0.292,0.031	0|0:0:1,0,0	0|0:0.246:0.768,0.218,0.014	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.308:0.716,0.26,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.308:0.716,0.26,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.264:0.753,0.23,0.017	1|1:1.603:0.007,0.383,0.61	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.308:0.716,0.26,0.024	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.304:0.719,0.258,0.023	0|0:0.18:0.833,0.155,0.013	1|0:0.942:0.249,0.559,0.192	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0.29:0.731,0.248,0.021	0|0:0.309:0.715,0.261,0.024	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.923,0.074,0.003	0|0:0:1,0,0	0|0:0.045:0.957,0.042,0.002	0|1:0.308:0.716,0.26,0.024	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.075:0.93,0.066,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.308:0.716,0.261,0.024	0|0:0.308:0.716,0.26,0.024	0|0:0.308:0.716,0.26,0.024	0|0:0:1,0,0	0|0:0.336:0.692,0.28,0.028	0|0:0.017:0.983,0.016,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0
+3	19785679	SNP-3.19784189.	A	G	.	PASS	AR2=0.941;DR2=0.956;AF=0.462	GT:DS:GP	1|1:1.793:0.01,0.187,0.803	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.78:0.289,0.642,0.069	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.422:0.627,0.324,0.049	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.511:0.559,0.371,0.07	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.211:0.168,0.453,0.379	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.375:0.099,0.426,0.475	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.718:0.021,0.24,0.739	1|1:2:0,0,1	1|1:1.752:0.016,0.215,0.768	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.723:0.02,0.237,0.743	1|1:1.849:0.006,0.139,0.855	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.945:0.002,0.05,0.947	1|1:2:0,0,1	1|1:1.8:0.01,0.179,0.811	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.919:0.003,0.075,0.922	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.8:0.01,0.179,0.811	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.764:0.014,0.209,0.778	1|1:1.796:0.012,0.179,0.808	1|1:2:0,0,1	1|1:1.802:0.01,0.178,0.812	1|0:0.91:0.29,0.509,0.2	1|1:2:0,0,1	1|1:1.854:0.005,0.136,0.859	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.674:0.326,0.674,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.709:0.021,0.249,0.73	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.818:0.197,0.789,0.014	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.945:0.002,0.051,0.947	1|1:1.761:0.017,0.206,0.778	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.391:0.673,0.263,0.064	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.273:0.728,0.27,0.002	1|1:1.843:0.006,0.145,0.849	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.038:0.963,0.035,0.002	0|0:0:1,0,0	0|0:0.686:0.384,0.545,0.07	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.287:0.724,0.264,0.012	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.945:0.002,0.05,0.947	0|0:0:1,0,0	1|1:1.761:0.016,0.207,0.777	1|1:1.727:0.019,0.234,0.747	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.966:0.001,0.033,0.966	0|1:1:0,1,0	0|1:1.418:0.074,0.433,0.493	0|0:0.413:0.636,0.315,0.049	0|0:0:1,0,0	1|1:1.839:0.007,0.147,0.846	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.749:0.016,0.219,0.765	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.508:0.061,0.369,0.57	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.37:0.112,0.407,0.481	0|0:0:1,0,0	1|1:1.853:0.006,0.135,0.859	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.854:0.006,0.134,0.86	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.862:0.006,0.127,0.867	1|1:2:0,0,1	0|1:1.443:0.087,0.383,0.53	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.625:0.04,0.294,0.665	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	19786568	SNP-3.19785078.	C	A	.	PASS	AR2=0.998;DR2=0.999;AF=0.349	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.982:0,0.017,0.983	1|1:1.972:0.001,0.027,0.972	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.285:0.716,0.284,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0
+3	19787590	SNP-3.19786100.	C	A	.	PASS	AR2=0.978;DR2=0.982;AF=0.316	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.904:0.004,0.087,0.908	1|1:1.895:0.003,0.099,0.898	1|1:1.981:0,0.019,0.981	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.927,0.073,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.717:0.01,0.263,0.727	1|1:2:0,0,1	1|1:1.878:0.004,0.113,0.883	1|1:2:0,0,1	1|0:1.154:0.001,0.843,0.156	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.793:0.015,0.177,0.808	0|1:1.249:0.013,0.724,0.263	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	1|1:1.807:0.01,0.173,0.817	0|0:0:1,0,0	1|1:1.952:0,0.047,0.953	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.683:0.022,0.272,0.706	0|0:0:1,0,0	1|1:1.797:0.01,0.183,0.807	0|0:0:1,0,0	1|1:1.53:0.047,0.375,0.577	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.835:0.008,0.149,0.843	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.835:0.006,0.154,0.841	1|1:1.972:0,0.027,0.972	1|1:1.866:0.003,0.128,0.869	1|1:1.823:0.007,0.162,0.831	1|1:1.835:0.005,0.154,0.84	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:1.843:0.006,0.145,0.849	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.938:0.001,0.06,0.939	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.882:0.005,0.108,0.887	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.859:0.002,0.136,0.862	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.867:0.022,0.089,0.889	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.695:0.024,0.257,0.719	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.801:0.011,0.177,0.812	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19788235	SNP-3.19786745.	A	G	.	PASS	AR2=0.878;DR2=0.913;AF=0.221	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.069:0.207,0.517,0.276	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.148:0.856,0.139,0.005	1|1:2:0,0,1	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.596:0.437,0.531,0.032	0|0:0.559:0.515,0.411,0.074	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.608:0.506,0.381,0.114	1|1:1.746:0.042,0.169,0.789	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.635:0.471,0.424,0.105	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.557:0.523,0.397,0.08	1|1:2:0,0,1	0|1:0.777:0.383,0.456,0.161	1|0:0.625:0.47,0.434,0.095	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.276:0.745,0.233,0.021	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.333:0.697,0.274,0.03	0|0:0.409:0.634,0.323,0.043	0|0:0:1,0,0	0|0:0.357:0.676,0.291,0.033	0|0:0.366:0.667,0.3,0.033	0|0:0:1,0,0	0|0:0.407:0.635,0.323,0.042	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.337:0.691,0.281,0.028	0|0:0:1,0,0	0|0:0.362:0.672,0.294,0.034	0|0:0:1,0,0	0|0:0.059:0.942,0.056,0.002	0|0:0.322:0.703,0.272,0.025	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.108:0.898,0.096,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.307:0.718,0.256,0.026	0|0:0.34:0.69,0.281,0.03	0|0:0:1,0,0	0|0:0.308:0.715,0.262,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.395:0.644,0.316,0.04	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.578:0.002,0.417,0.58	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.278:0.743,0.236,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.184:0.181,0.453,0.366	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0.635:0.469,0.428,0.103	0|0:0.175:0.829,0.167,0.004	0|0:0:1,0,0	1|0:0.603:0.49,0.416,0.094	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.547:0.524,0.405,0.071	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.877:0.268,0.587,0.145	0|0:0.477:0.542,0.438,0.02	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.404:0.637,0.321,0.042	1|1:2:0,0,1	0|1:1.361:0.105,0.428,0.466	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.723:0.41,0.457,0.133	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.232:0.774,0.221,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.36:0.674,0.293,0.034	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.973:0,0.026,0.973	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.419:0.627,0.326,0.047	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.339:0.69,0.281,0.029	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.973:0,0.026,0.973	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.055:0.947,0.051,0.002	1|1:2:0,0,1	0|0:0.846:0.345,0.464,0.191	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.277:0.744,0.235,0.021
+3	19788877	SNP-3.19787387.	C	A	.	PASS	AR2=0.988;DR2=0.99;AF=0.328	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.629:0.001,0.369,0.63	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.016:0.984,0.016,0	0|0:0.099:0.905,0.091,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.085:0.916,0.082,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.963,0.036,0	0|0:0.065:0.936,0.064,0.001	0|0:0:1,0,0	0|0:0.04:0.96,0.039,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.931,0.068,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.087:0.915,0.083,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.772:0.236,0.757,0.008	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.97:0,0.03,0.97	0|0:0.301:0.715,0.268,0.016	1|0:0.944:0.094,0.869,0.038	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.897:0.002,0.099,0.899	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|0:0.95:0.084,0.881,0.034	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.048:0.952,0.047,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.349:0.018,0.615,0.367	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.979:0,0.02,0.979	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.969,0.031,0	0|0:0.094:0.907,0.092,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.048:0.953,0.047,0.001	0|0:0.052:0.949,0.05,0.001	0|0:0.071:0.929,0.071,0	0|0:0:1,0,0	0|0:0.105:0.899,0.097,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0
+3	19789181	SNP-3.19787691.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.467	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.937,0.062,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.42:0.641,0.299,0.06	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.3:0.007,0.685,0.307	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.947,0.052,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19790313	SNP-3.19788823.	C	A	.	PASS	AR2=0.992;DR2=0.993;AF=0.356	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.037:0.964,0.036,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.323:0.027,0.622,0.35	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:0.95:0.316,0.418,0.266	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.357:0.006,0.632,0.362	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.176:0.036,0.753,0.211	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.944,0.056,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.151:0.849,0.151,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19793580	SNP-3.19792090.	C	A	.	PASS	AR2=0.964;DR2=0.973;AF=0.294	GT:DS:GP	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|0:0.889:0.181,0.748,0.07	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.949:0,0.051,0.949	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.607:0.047,0.299,0.654	1|0:1:0,1,0	1|1:1.197:0.185,0.434,0.382	0|1:1:0,1,0	1|1:1.32:0.109,0.463,0.429	1|1:2:0,0,1	1|1:1.963:0.002,0.033,0.965	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.85:0.002,0.146,0.852	1|1:1.747:0.022,0.209,0.769	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.618:0.036,0.31,0.654	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.397:0.093,0.417,0.49	1|0:1:0,1,0	1|1:1.583:0.043,0.331,0.626	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.756:0.014,0.217,0.769	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.766:0.013,0.208,0.779	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.239:0.156,0.449,0.395	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.493:0.062,0.383,0.555	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.376:0.642,0.34,0.018	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.645:0.035,0.284,0.68	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.652:0.035,0.277,0.688	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19794579	SNP-3.19793089.	C	A	.	PASS	AR2=0.983;DR2=0.988;AF=0.311	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.814:0.011,0.163,0.825	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.522:0.055,0.368,0.577	1|1:1.701:0.023,0.252,0.724	1|1:1.616:0.039,0.307,0.655	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.62:0.035,0.311,0.655	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.375:0.641,0.343,0.016	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.639:0.034,0.293,0.673	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.171:0.829,0.171,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.788:0.005,0.202,0.793	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.747:0.018,0.217,0.765	0|0:0:1,0,0
+3	19795654	SNP-3.19794164.	C	A	.	PASS	AR2=0.993;DR2=0.994;AF=0.33	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.911:0.003,0.083,0.914	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.936,0.063,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.839:0.005,0.15,0.845	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.97:0,0.029,0.971	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.012:0.988,0.012,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.971:0,0.029,0.971	1|1:2:0,0,1	1|1:1.961:0.001,0.038,0.962	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.87:0.005,0.121,0.874	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.39:0.624,0.362,0.014	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.798:0.007,0.189,0.805	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.857:0.001,0.141,0.858	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.948:0.002,0.048,0.95	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19796643	SNP-3.19795153.	C	A	.	PASS	AR2=0.968;DR2=0.978;AF=0.301	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:0.951:0.158,0.733,0.109	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.552:0.048,0.352,0.6	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.722:0.019,0.241,0.74	1|1:1.669:0.029,0.272,0.698	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.599:0.042,0.318,0.641	0|0:0:1,0,0	1|1:1.648:0.03,0.292,0.678	0|1:1:0,1,0	1|1:1.652:0.032,0.283,0.685	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.63:0.035,0.3,0.665	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.479:0.066,0.39,0.544	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.785:0.248,0.719,0.033	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.956:0,0.044,0.956	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.711:0.307,0.674,0.019	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.846:0.006,0.142,0.852	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.599:0,0.401,0.599	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.469:0.072,0.387,0.541	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.423:0.086,0.404,0.509	0|0:0:1,0,0
+3	19796959	SNP-3.19795469.	A	G	.	PASS	AR2=0.994;DR2=0.995;AF=0.21	GT:DS:GP	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.01:0.99,0.01,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.122:0.885,0.109,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	1|0:1:0,1,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0.046:0.955,0.045,0.001	0|0:0.05:0.951,0.049,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.051:0.95,0.049,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.927,0.073,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.115:0.888,0.11,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.907,0.088,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.017:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.072:0.929,0.07,0.001	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0.047:0.954,0.045,0.001	0|0:0.094:0.906,0.094,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19798380	SNP-3.19796890.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.368	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.078:0.925,0.072,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.241:0.038,0.683,0.279	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.655:0.345,0.655,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.041:0.959,0.041,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19799905	SNP-3.19798415.	A	G	.	PASS	AR2=0.969;DR2=0.976;AF=0.469	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.838:0.007,0.148,0.845	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1.057:0.012,0.918,0.07	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.926:0.002,0.07,0.928	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.966:0,0.033,0.966	1|1:2:0,0,1	1|1:1.397:0.088,0.427,0.485	1|1:2:0,0,1	1|1:1.891:0.003,0.102,0.895	1|1:1.966:0,0.033,0.966	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.913:0.003,0.081,0.916	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.687:0.026,0.261,0.713	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.631:0.035,0.299,0.666	1|1:1.664:0.028,0.281,0.692	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1.691:0.025,0.258,0.716	1|1:1.697:0.024,0.254,0.721	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.689:0.026,0.26,0.714	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:0.845:0.199,0.757,0.044	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.664:0.029,0.277,0.694	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.968:0,0.032,0.968	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.839:0.006,0.149,0.845	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.806:0.022,0.149,0.829	0|0:0.082:0.918,0.082,0	1|1:1.6:0.041,0.319,0.641	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.668:0.029,0.274,0.697	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.707:0.023,0.247,0.73	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	1|1:1.669:0.028,0.275,0.697	1|1:1.931:0.003,0.063,0.934	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.806:0.011,0.171,0.817	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.69:0.026,0.259,0.716	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.686:0,0.313,0.687	0|0:0:1,0,0	1|1:2:0,0,1
+3	19801185	SNP-3.19799695.	C	A	.	PASS	AR2=0.997;DR2=0.997;AF=0.357	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.052:0.949,0.05,0.001	0|0:0:1,0,0	0|0:0.142:0.867,0.124,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.948,0.051,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.048:0.953,0.047,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.076:0.031,0.862,0.107	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.963:0,0.037,0.963	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.024:0.068,0.84,0.092	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.108:0.892,0.108,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19805029	SNP-3.19803539.	C	A	.	PASS	AR2=0.966;DR2=0.973;AF=0.279	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.556:0.047,0.35,0.603	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.483:0.026,0.465,0.509	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:1.416:0.105,0.374,0.521	1|1:2:0,0,1	1|1:1.655:0.022,0.301,0.677	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.941:0.001,0.057,0.942	1|1:1.537:0.051,0.362,0.588	1|1:1.927:0.002,0.069,0.929	1|1:1.929:0.002,0.068,0.931	1|1:2:0,0,1	1|1:1.927:0.002,0.07,0.928	1|1:1.907:0.004,0.085,0.911	1|1:1.853:0,0.147,0.853	1|1:1.949:0.003,0.045,0.952	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.919:0.002,0.077,0.921	0|0:0:1,0,0	1|1:1.911:0.002,0.086,0.913	0|0:0.015:0.985,0.015,0	1|1:1.344:0.05,0.555,0.394	1|1:1.711:0.027,0.234,0.738	1|0:1.198:0.133,0.535,0.331	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.638:0.009,0.344,0.647	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.719:0.03,0.221,0.749	0|0:0:1,0,0	1|1:1.983:0,0.017,0.983	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.961:0.001,0.038,0.962	1|1:2:0,0,1	0|0:0.103:0.898,0.102,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.976:0,0.023,0.976	1|1:2:0,0,1	1|0:1.092:0.208,0.492,0.3	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.885:0.002,0.111,0.887	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.959:0.049,0.943,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.287:0.045,0.622,0.332	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.878:0.004,0.114,0.882	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.911:0,0.088,0.912	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19805536	SNP-3.19804046.	C	A	.	PASS	AR2=0.99;DR2=0.992;AF=0.31	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.713:0.017,0.253,0.73	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.968:0,0.032,0.968	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.985:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.49:0.017,0.477,0.506	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.976:0,0.023,0.976	1|1:1.927:0.001,0.071,0.928	0|0:0:1,0,0	1|1:1.875:0.002,0.122,0.876	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.767:0.008,0.218,0.774	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.075:0.079,0.768,0.153	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.028:0.972,0.028,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.969:0.001,0.03,0.969	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:1.883:0.004,0.109,0.887	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.878:0.002,0.118,0.88	0|0:0:1,0,0
+3	19808714	SNP-3.19807224.	C	A	.	PASS	AR2=0.966;DR2=0.974;AF=0.281	GT:DS:GP	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1.43:0.077,0.415,0.507	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.631:0.052,0.264,0.683	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0.053:0.948,0.05,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.721:0.031,0.217,0.752	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.535:0.051,0.364,0.586	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.782:0.011,0.196,0.793	1|1:1.824:0.008,0.16,0.832	0|0:0:1,0,0	1|1:1.772:0.01,0.207,0.783	1|1:1.846:0.004,0.146,0.85	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.895:0.003,0.099,0.898	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.73:0.02,0.231,0.75	0|0:0:1,0,0	1|1:1.563:0.037,0.362,0.6	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.703:0.013,0.271,0.716	1|0:0.775:0.263,0.699,0.038	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.093:0.911,0.086,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.858:0.005,0.131,0.864	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.828:0.01,0.152,0.838	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.959:0.05,0.941,0.009	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.901:0.002,0.096,0.902	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.964:0.093,0.851,0.056	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.819:0.008,0.165,0.827	1|1:2:0,0,1	1|1:1.704:0.021,0.255,0.725	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.982,0.018,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.82:0.007,0.165,0.827	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.428:0.051,0.47,0.479	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.897:0.006,0.091,0.903	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19810983	SNP-3.19809493.	A	G	.	PASS	AR2=0.978;DR2=0.98;AF=0.504	GT:DS:GP	1|1:1.826:0.007,0.161,0.832	0|0:0:1,0,0	1|1:1.955:0.001,0.042,0.956	0|0:0:1,0,0	1|1:1.905:0.004,0.088,0.908	1|1:2:0,0,1	1|1:1.901:0.003,0.092,0.905	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.891:0.003,0.102,0.895	1|1:1.927:0.003,0.067,0.93	1|1:1.903:0.003,0.091,0.906	1|1:2:0,0,1	1|1:1.891:0.004,0.102,0.894	0|0:0:1,0,0	1|1:1.891:0.003,0.102,0.895	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.905:0.003,0.089,0.908	1|1:2:0,0,1	1|1:1.911:0.002,0.084,0.913	1|1:1.897:0.004,0.095,0.901	0|0:0:1,0,0	1|1:1.895:0.003,0.099,0.898	1|1:1.89:0.004,0.103,0.894	1|1:1.891:0.004,0.101,0.895	1|1:1.894:0.003,0.1,0.897	1|1:1.891:0.004,0.102,0.895	1|1:1.884:0.005,0.107,0.888	1|1:2:0,0,1	1|1:1.891:0.004,0.101,0.895	1|1:1.924:0.002,0.073,0.925	1|1:1.942:0.002,0.053,0.944	1|1:1.89:0.003,0.103,0.893	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.865:0.004,0.127,0.869	1|1:1.907:0.004,0.085,0.911	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.852:0.004,0.14,0.856	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.852:0.005,0.137,0.858	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.959:0.001,0.04,0.959	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.893:0.003,0.101,0.896	1|1:1.902:0.004,0.091,0.906	1|1:1.907:0.004,0.086,0.911	1|1:1.894:0.003,0.099,0.898	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.894:0.003,0.1,0.897	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.896:0.003,0.098,0.899	0|0:0:1,0,0	1|1:1.899:0.003,0.096,0.902	1|1:1.899:0.003,0.096,0.901	1|1:2:0,0,1	1|1:1.893:0.003,0.101,0.896	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.887:0.002,0.109,0.889	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.021:0.979,0.021,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.904:0.003,0.089,0.908	1|1:1.895:0.003,0.098,0.899	1|1:1.909:0.002,0.086,0.912	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.808:0.005,0.181,0.813	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.822:0.01,0.158,0.832	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.904:0.003,0.091,0.907	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.9:0.005,0.09,0.905	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.893:0.003,0.1,0.896	1|1:1.909:0.004,0.083,0.913	1|1:1.909:0.003,0.085,0.912	1|1:1.909:0.004,0.083,0.913	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	1|1:2:0,0,1
+3	19811307	SNP-3.19809817.	A	G	.	PASS	AR2=0.996;DR2=0.997;AF=0.527	GT:DS:GP	1|1:1.982:0,0.018,0.982	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.028,0.972	1|1:1.703:0,0.297,0.703	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.987:0,0.013,0.987	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.96:0.001,0.039,0.96	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.983:0,0.017,0.983	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.039:0.015,0.931,0.054	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.199:0.012,0.776,0.212	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.979:0,0.021,0.979	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.022:0.978,0.022,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.03:0.97,0.03,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.941:0.002,0.055,0.943	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.97:0,0.029,0.97	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	19815261	SNP-3.19813771.	C	A	.	PASS	AR2=0.995;DR2=0.996;AF=0.325	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.023:0.977,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.964:0.001,0.035,0.965	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.949:0.001,0.048,0.95	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.959:0.001,0.04,0.959	0|1:1:0,1,0	0|0:0.074:0.926,0.074,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.95:0.001,0.048,0.951	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.899:0.002,0.096,0.901	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.968:0,0.032,0.968	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.981:0,0.019,0.981	0|0:0:1,0,0	1|0:1.406:0.019,0.557,0.424	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.949:0.001,0.049,0.95	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19816969	SNP-3.19815479.	C	A	.	PASS	AR2=0.992;DR2=0.993;AF=0.358	GT:DS:GP	0|0:0:1,0,0	1|1:1.941:0.001,0.058,0.942	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|0:1:0,1,0	0|0:0.094:0.907,0.093,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.945,0.054,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.1:0.9,0.099,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.141:0.864,0.132,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.894:0.005,0.097,0.898	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.01:0.022,0.946,0.032	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.918:0.002,0.079,0.919	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.917:0.001,0.08,0.919	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:1.889:0.002,0.107,0.891	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.611:0.003,0.382,0.614	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.04:0.002,0.955,0.042	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.965:0,0.034,0.965	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.282:0.719,0.281,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19821451	SNP-3.19819961.	A	G	.	PASS	AR2=0.888;DR2=0.919;AF=0.307	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.42:0.627,0.325,0.047	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1.189:0.009,0.794,0.198	0|0:0.435:0.617,0.33,0.053	0|1:1:0,1,0	0|1:1.085:0.025,0.866,0.109	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.7:0.424,0.452,0.124	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.706:0.421,0.453,0.126	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.715:0.415,0.455,0.13	1|0:0.735:0.4,0.465,0.135	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.737:0.399,0.465,0.136	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.955:0.001,0.044,0.956	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.782:0.37,0.478,0.152	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.383:0.62,0.378,0.003	1|0:0.567:0.513,0.406,0.081	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.567:0.513,0.406,0.081	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:0.735:0.4,0.465,0.135	1|1:2:0,0,1	0|1:0.596:0.493,0.418,0.089	1|1:2:0,0,1	0|0:0.112:0.888,0.112,0	1|0:0.735:0.4,0.465,0.135	1|0:0.567:0.513,0.406,0.081	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.735:0.4,0.465,0.135	0|0:0.395:0.655,0.294,0.051	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.568:0.513,0.406,0.081	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.568:0.513,0.406,0.081	0|0:0.743:0.395,0.467,0.138	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.938:0.322,0.419,0.26	0|0:0.336:0.664,0.336,0	1|1:2:0,0,1	0|0:0.736:0.4,0.464,0.136	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.612:0.482,0.424,0.094	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.567:0.513,0.406,0.081	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.735:0.4,0.465,0.135	1|1:2:0,0,1	0|0:0.4:0.652,0.297,0.052	1|0:0.4:0.651,0.297,0.052	0|0:0.399:0.652,0.296,0.052	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.4:0.652,0.297,0.052	0|0:0.399:0.653,0.295,0.052	0|0:0.445:0.609,0.337,0.054	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.445:0.609,0.337,0.054	1|1:2:0,0,1	0|0:0.112:0.896,0.096,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.567:0.513,0.406,0.081	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.501:0.564,0.371,0.065	0|1:0.884:0.297,0.522,0.181	0|0:0.629:0.517,0.337,0.146	0|0:0.383:0.661,0.294,0.045	0|0:0:1,0,0	1|1:2:0,0,1
+3	19823020	SNP-3.19821530.	A	G	.	PASS	AR2=0.863;DR2=0.898;AF=0.237	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.969,0.031,0	1|1:1.703:0.02,0.258,0.722	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.151:0.851,0.147,0.002	1|0:1.068:0.083,0.766,0.151	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.179:0.823,0.176,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.426:0.092,0.391,0.518	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.264:0.138,0.459,0.403	0|0:0:1,0,0	1|1:1.707:0.028,0.237,0.735	0|1:1.037:0.098,0.768,0.135	1|1:1.4:0.103,0.394,0.503	0|0:0:1,0,0	1|1:1.704:0.029,0.239,0.732	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.584:0.481,0.455,0.064	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.683:0.432,0.453,0.115	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.63:0.47,0.43,0.1	1|1:2:0,0,1	0|1:0.693:0.429,0.449,0.122	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.614:0.489,0.407,0.104	0|0:0:1,0,0	0|0:0.769:0.379,0.474,0.147	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.785:0.37,0.475,0.155	1|1:2:0,0,1	0|0:0.674:0.444,0.438,0.118	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.717:0.389,0.504,0.106	0|0:0:1,0,0	0|0:0.243:0.772,0.212,0.015	0|0:0:1,0,0	0|1:0.915:0.244,0.596,0.159	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.684:0.433,0.449,0.117	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.861:0.311,0.517,0.172	0|1:0.687:0.436,0.441,0.123	1|0:0.741:0.401,0.456,0.142	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.92,0.08,0	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0	0|0:0.044:0.956,0.044,0	0|0:0:1,0,0	0|0:0.036:0.964,0.036,0	0|0:0.037:0.963,0.037,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.04:0.961,0.039,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.589:0.494,0.423,0.083	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.964,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.048:0.953,0.047,0.001	0|0:0:1,0,0	0|0:0.706:0.413,0.468,0.119	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.676:0.442,0.439,0.118	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.039:0.961,0.039,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	1|1:2:0,0,1	1|1:1.523:0.073,0.331,0.596	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.784:0.369,0.478,0.153	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.149:0.136,0.58,0.285	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.673:0.032,0.263,0.705	1|1:1.593:0.057,0.294,0.649	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.264:0.753,0.229,0.018	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.918:0.327,0.429,0.244	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.447:0.618,0.318,0.064	0|0:0:1,0,0	1|1:1.465:0.081,0.373,0.546	1|1:2:0,0,1	0|0:0.709:0.418,0.454,0.127	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.684:0.431,0.454,0.115	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.401:0.651,0.297,0.052	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.443:0.615,0.328,0.057	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.401:0.651,0.297,0.052	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.677:0.442,0.439,0.119
+3	19825097	SNP-3.19823607.	C	A	.	PASS	AR2=0.988;DR2=0.991;AF=0.372	GT:DS:GP	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	0|0:0.062:0.939,0.06,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.932,0.067,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.117:0.891,0.101,0.008	0|0:0:1,0,0	0|0:0.006:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.927:0,0.073,0.927	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.979:0,0.021,0.979	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.539:0.463,0.535,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.108:0.01,0.873,0.117	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.932,0.066,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.189:0.001,0.81,0.19	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.086:0.916,0.082,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.081:0.92,0.079,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.353:0.661,0.324,0.015	1|0:1.282:0,0.718,0.282	0|0:0.007:0.993,0.007,0	0|0:0.144:0.87,0.116,0.014	0|0:0:1,0,0	0|0:0.217:0.787,0.209,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.079:0.923,0.075,0.002	0|0:0.077:0.925,0.073,0.002	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19825898	SNP-3.19824408.	A	G	.	PASS	AR2=0.992;DR2=0.994;AF=0.495	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.274:0.742,0.241,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1.12:0.215,0.45,0.335	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.605:0.471,0.454,0.075	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.972:0,0.028,0.972	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.3:0.007,0.685,0.308	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.978,0.022,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1
+3	19827035	SNP-3.19825545.	A	G	.	PASS	AR2=0.968;DR2=0.975;AF=0.283	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.164:0.844,0.148,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.098:0.907,0.089,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.959:0.001,0.04,0.959	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.21:0.799,0.192,0.009	0|0:0.174:0.834,0.158,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.165:0.842,0.151,0.007	0|0:0:1,0,0	0|0:0.142:0.864,0.13,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.207:0.793,0.207,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:1.976:0.001,0.023,0.976	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0,0.032,0.968	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:1.983:0,0.016,0.984	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.345:0.669,0.317,0.014	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.177:0.831,0.161,0.008	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.912:0.088,0.912,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.17:0.837,0.155,0.007	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.156:0.851,0.143,0.006	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0.456:0.621,0.303,0.076	1|1:1.989:0,0.011,0.989	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.177:0.831,0.161,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.164:0.842,0.151,0.007	0|0:0:1,0,0	0|0:0.165:0.842,0.151,0.007	0|0:0.162:0.845,0.149,0.007	0|0:0.191:0.818,0.172,0.009	0|0:0:1,0,0	0|0:0.169:0.838,0.155,0.007	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.8:0.001,0.199,0.8	0|0:0.214:0.793,0.199,0.007	0|0:0.137:0.869,0.125,0.006	0|0:0.23:0.781,0.208,0.011	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.977:0,0.023,0.977	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:1.984:0,0.016,0.984	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.969:0.001,0.03,0.969	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.097:0.907,0.089,0.004	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.101:0.904,0.092,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.118:0.882,0.118,0	0|0:0.793:0.442,0.323,0.235	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19827178	SNP-3.19825688ct.	C	A	.	PASS	AR2=0.997;DR2=0.997;AF=0.449	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.952:0.001,0.046,0.953	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.99:0.011,0.987,0.001	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.895:0.001,0.103,0.896	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.979:0,0.021,0.979	1|1:2:0,0,1	1|1:1.914:0.001,0.083,0.915	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.939:0.001,0.059,0.94	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.979:0,0.021,0.979	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.996:0.026,0.952,0.022	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.231:0.772,0.226,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.969:0,0.031,0.969	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.949:0.001,0.049,0.95	0|0:0:1,0,0
+3	19827206	SNP-3.19825716.	C	A	.	PASS	AR2=0.991;DR2=0.992;AF=0.36	GT:DS:GP	0|0:0.011:0.989,0.011,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.942,0.058,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.114:0.889,0.107,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.478:0.625,0.272,0.103	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.973,0.027,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.074:0.929,0.069,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.025,0	1|1:2:0,0,1	0|0:0.003:0.997,0.003,0	0|0:0.053:0.948,0.052,0	0|0:0.057:0.944,0.055,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.009:0.991,0.008,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.956,0.044,0	0|0:0.162:0.845,0.149,0.007	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.015,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.087:0.914,0.084,0.002	0|0:0.112:0.891,0.106,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.929,0.068,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.209:0.799,0.194,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.152:0.855,0.139,0.007	0|0:0:1,0,0	0|0:0.098:0.905,0.092,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19831789	SNP-3.19830299.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.408	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.95:0.052,0.946,0.002	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.896:0.007,0.09,0.903	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19832788	SNP-3.19831298.	C	A	.	PASS	AR2=0.977;DR2=0.98;AF=0.418	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.022:0.978,0.022,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.204:0.809,0.177,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.052:0.218,0.511,0.27	0|1:0.995:0.256,0.494,0.25	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0.013:0.987,0.013,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.74:0.425,0.411,0.164	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.947,0.051,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.783:0.001,0.215,0.784	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0.953:0.275,0.497,0.228	0|0:0:1,0,0	1|0:0.952:0.275,0.497,0.228	0|0:0:1,0,0	0|1:1:0,1,0	1|0:0.951:0.276,0.497,0.227	0|1:0.958:0.273,0.497,0.231	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.953:0.275,0.497,0.228	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19834159	SNP-3.19832669.	A	G	.	PASS	AR2=0.996;DR2=0.997;AF=0.253	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.362:0.639,0.36,0.001	0|1:0.536:0.468,0.528,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19834518	SNP-3.19833028.	C	A	.	PASS	AR2=0.984;DR2=0.987;AF=0.389	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.051:0.95,0.05,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.948,0.051,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.952,0.047,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.938,0.059,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.948,0.051,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.167:0.844,0.145,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.075:0.928,0.07,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.035:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.038:0.001,0.961,0.038	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.016:0.001,0.983,0.017	1|1:2:0,0,1	1|1:1.007:0.245,0.503,0.252	0|1:0.755:0.388,0.468,0.144	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.858:0,0.142,0.858	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0.621:0.469,0.442,0.09	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.076:0.927,0.071,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.965,0.035,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.969,0.031,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.953,0.047,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.044:0.957,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.938,0.059,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.954,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.755:0.388,0.468,0.144	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19834644	SNP-3.19833154.	C	A	.	PASS	AR2=0.957;DR2=0.969;AF=0.415	GT:DS:GP	0|0:0:1,0,0	1|1:1.782:0.011,0.196,0.793	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.651:0.027,0.294,0.678	1|1:2:0,0,1	1|1:1.669:0.036,0.258,0.706	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.969:0,0.03,0.969	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.914:0.086,0.914,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.543:0.048,0.361,0.591	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.84:0.007,0.147,0.847	0|1:1.503:0.063,0.371,0.566	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.556:0.044,0.357,0.6	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.554:0.057,0.332,0.611	1|1:1.975:0,0.025,0.975	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.597:0.041,0.322,0.637	1|1:1.61:0,0.39,0.61	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.593:0.042,0.323,0.635	1|1:2:0,0,1	1|0:1.043:0.18,0.596,0.224	1|1:2:0,0,1	1|1:1.778:0.017,0.188,0.795	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.809:0.003,0.184,0.813	1|1:2:0,0,1	1|1:1.634:0.033,0.301,0.667	1|1:1.698:0.032,0.239,0.729	1|1:1.598:0.039,0.323,0.637	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.932:0,0.067,0.932	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.496:0.065,0.373,0.561	1|1:1.89:0.008,0.094,0.898	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.537:0.059,0.345,0.596	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.972:0,0.027,0.972	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.975:0,0.025,0.975	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.973:0.001,0.026,0.974	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.855:0.026,0.093,0.881	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.614:0.027,0.331,0.642	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.673:0.032,0.262,0.705	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.525:0.05,0.375,0.575	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.409:0.088,0.415,0.497	0|0:0:1,0,0
+3	19834860	SNP-3.19833370.	A	G	.	PASS	AR2=1;DR2=1;AF=0.247	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.983:0,0.017,0.983	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.994:0,0.005,0.994	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19834876	SNP-3.19833386.	C	A	.	PASS	AR2=0.986;DR2=0.988;AF=0.394	GT:DS:GP	0|0:0.181:0.823,0.173,0.004	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.178:0.829,0.163,0.008	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.163:0.843,0.15,0.007	0|0:0.042:0.959,0.041,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.139:0.866,0.129,0.005	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.175:0.831,0.164,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.336:0.693,0.278,0.029	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0.144:0.861,0.135,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.722:0,0.278,0.722	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.99:0,0.009,0.991	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.279:0.001,0.719,0.28	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.216:0.003,0.778,0.219	1|1:2:0,0,1	0|1:1.192:0.043,0.721,0.236	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.95,0.049,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.204:0.804,0.187,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.142:0.863,0.132,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.113:0.892,0.103,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.135:0.87,0.126,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19835332	SNP-3.19833842.	A	G	.	PASS	AR2=0.967;DR2=0.978;AF=0.516	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.726:0.024,0.227,0.749	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.796:0,0.203,0.796	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.765:0.013,0.209,0.778	1|1:1.593:0.018,0.372,0.61	1|1:1.153:0.308,0.231,0.461	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.683:0.32,0.677,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.878:0.002,0.118,0.88	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.817:0.007,0.168,0.825	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.517:0.058,0.366,0.576	1|1:1.553:0.05,0.348,0.603	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.941:0.002,0.056,0.943	1|1:1.917:0.002,0.079,0.919	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.457:0.072,0.398,0.53	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.535:0.02,0.425,0.555	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.524:0.056,0.363,0.581	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.857:0.005,0.133,0.862	1|1:1.74:0.027,0.206,0.767	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.565:0.047,0.341,0.612	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.652:0.035,0.277,0.688	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.563:0.048,0.341,0.611	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	19836206	SNP-3.19834716.	C	A	.	PASS	AR2=0.972;DR2=0.978;AF=0.31	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.693:0.023,0.26,0.717	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:0.913:0.207,0.673,0.12	1|1:1.952:0.001,0.046,0.953	0|0:0:1,0,0	1|1:1.814:0.011,0.163,0.826	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.112:0.093,0.702,0.205	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.684:0.026,0.265,0.709	0|0:0:1,0,0	1|1:1.751:0.015,0.219,0.766	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.575:0.037,0.352,0.611	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.819:0.009,0.163,0.828	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.772:0.012,0.204,0.784	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.702:0.328,0.642,0.03	1|0:1:0,1,0	1|1:1.887:0.002,0.108,0.889	1|1:1.927:0.002,0.069,0.929	1|1:2:0,0,1	1|1:1.709:0.021,0.248,0.731	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.912:0.002,0.085,0.913	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.742:0.016,0.227,0.758	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.519:0.036,0.41,0.554	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.824:0.007,0.162,0.831	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.843:0.007,0.143,0.85	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.704:0.022,0.251,0.726	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.842:0.006,0.146,0.848	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.699:0.023,0.256,0.721	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19836924	SNP-3.19835434.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.368	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.945,0.054,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.861:0,0.139,0.861	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.101:0.901,0.096,0.003	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19846674	SNP-3.19845184.	C	A	.	PASS	AR2=0.986;DR2=0.989;AF=0.395	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.151:0.855,0.139,0.006	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0.232:0.78,0.209,0.012	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.181:0.826,0.166,0.007	0|0:0.268:0.749,0.233,0.018	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.505:0.512,0.471,0.017	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.429:0.606,0.359,0.035	0|0:0.037:0.964,0.036,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.079:0.925,0.072,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.032:0.007,0.954,0.039	0|1:1.023:0.007,0.964,0.029	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.278:0.001,0.72,0.279	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.172:0.834,0.16,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.022:0.007,0.964,0.029	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.158:0.85,0.143,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.112:0.891,0.106,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.113:0.891,0.105,0.004	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19846719	SNP-3.19845229.	C	A	.	PASS	AR2=1;DR2=1;AF=0.473	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19858269	SNP-3.19856779.	C	A	.	PASS	AR2=1;DR2=1;AF=0.354	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.066:0.934,0.065,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19858450	SNP-3.19856960.	A	G	.	PASS	AR2=0.984;DR2=0.987;AF=0.263	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.179:0.827,0.168,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.623:0.035,0.308,0.658	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.14:0.867,0.127,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.782:0.004,0.21,0.786	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.832:0.003,0.162,0.835	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.624:0.023,0.329,0.648	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0.104:0.896,0.104,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.906:0.001,0.093,0.907	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.138:0.139,0.584,0.277	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.067:0.934,0.065,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.124:0.88,0.115,0.004	1|0:1:0,1,0	0|0:0.164:0.842,0.153,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.629:0.003,0.366,0.631	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19859491	SNP-3.19858001.	A	G	.	PASS	AR2=0.98;DR2=0.986;AF=0.216	GT:DS:GP	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.497:0.565,0.372,0.063	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.123:0.877,0.122,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.294:0.735,0.235,0.03	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.959,0.04,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.111:0.891,0.108,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.956,0.044,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.021:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.327:0.695,0.283,0.022	0|0:0.115:0.886,0.112,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.508:0.543,0.406,0.051	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.491:0.515,0.479,0.006	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.039:0.961,0.039,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0.348:0.677,0.299,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19860748	SNP-3.19859258.	A	G	.	PASS	AR2=0.997;DR2=0.997;AF=0.267	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.93,0.07,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0.143,0.714,0.143	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.109:0.894,0.103,0.003	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19861709	SNP-3.19860219.	C	A	.	PASS	AR2=0.974;DR2=0.979;AF=0.456	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.012:0.988,0.012,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.319:0.059,0.562,0.378	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.248:0.771,0.211,0.019	0|0:0.014:0.986,0.013,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0.025:0.976,0.024,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.077:0.924,0.075,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.188:0.818,0.176,0.006	1|1:1.835:0.009,0.147,0.844	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.688:0.025,0.262,0.713	0|0:0:1,0,0	1|1:1.849:0.008,0.134,0.858	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.584:0.04,0.336,0.624	1|1:2:0,0,1	0|0:0.144:0.859,0.138,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.369:0.668,0.295,0.037	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.78:0.376,0.468,0.156	1|1:2:0,0,1	0|1:0.768:0.313,0.607,0.08	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.596:0.012,0.381,0.608	1|1:2:0,0,1	0|0:0.78:0.376,0.468,0.156	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.353:0.061,0.525,0.414	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.019:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:1.845:0.008,0.139,0.853	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.777:0.378,0.467,0.155	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.146:0.856,0.141,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:1.845:0.008,0.138,0.854	0|0:0:1,0,0	0|0:0.025:0.976,0.024,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19862076	SNP-3.19860586.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.261	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.081:0.919,0.081,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.039:0.961,0.039,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19864083	SNP-3.19862593.	A	G	.	PASS	AR2=0.964;DR2=0.972;AF=0.464	GT:DS:GP	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:1.839:0.005,0.15,0.844	0|0:0.345:0.661,0.334,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.799:0.009,0.183,0.808	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.742:0.016,0.226,0.758	1|1:2:0,0,1	1|1:1.703:0.022,0.254,0.725	1|1:2:0,0,1	0|0:0.133:0.873,0.122,0.006	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.719:0.017,0.248,0.736	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.74:0.017,0.225,0.758	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.664:0.019,0.298,0.683	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.104:0.069,0.758,0.173	1|1:2:0,0,1	1|1:1.788:0.006,0.199,0.794	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.871:0.008,0.113,0.879	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.2:0.8,0.2,0	0|0:0:1,0,0	1|1:1.668:0.015,0.303,0.682	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.564:0.053,0.33,0.617	0|1:0.983:0.216,0.585,0.199	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.747:0.009,0.235,0.756	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.955:0.001,0.044,0.956	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.822:0.006,0.167,0.828	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.736:0.017,0.229,0.754	1|1:1.611:0.03,0.329,0.641	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.511:0.064,0.361,0.575	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.73:0.022,0.226,0.752	0|1:0.899:0.122,0.858,0.02	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.825:0.006,0.164,0.83	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.883:0.003,0.111,0.886	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.902:0.003,0.093,0.904	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.757:0.015,0.213,0.772	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.382:0.088,0.442,0.47	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19864785	SNP-3.19863295.	A	G	.	PASS	AR2=0.944;DR2=0.958;AF=0.265	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.177:0.83,0.163,0.007	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.495:0.059,0.388,0.554	0|0:0:1,0,0	0|0:0.297:0.723,0.257,0.02	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.196:0.814,0.177,0.009	0|0:0:1,0,0	0|0:0.335:0.69,0.285,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.273:0.744,0.239,0.017	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.196:0.812,0.18,0.008	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.766:0.015,0.205,0.781	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.66:0.44,0.46,0.1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.232:0.781,0.205,0.014	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.062:0.938,0.061,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.315:0.699,0.286,0.015	0|0:0.388:0.646,0.319,0.034	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.186:0.822,0.17,0.008	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.237:0.777,0.208,0.014	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.244:0.771,0.214,0.015	0|0:0.439:0.598,0.365,0.037	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.422:0.624,0.331,0.045	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.08:0.923,0.075,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.31:0.714,0.263,0.024	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.328:0.698,0.275,0.027	0|0:0:1,0,0	1|1:1.739:0.016,0.228,0.756	1|1:1.672:0.027,0.275,0.698	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.234:0.779,0.207,0.014	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.232:0.781,0.205,0.014	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.14:0.869,0.122,0.009	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.052:0.95,0.048,0.002	0|0:0.076:0.924,0.075,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.422:0.624,0.331,0.045	0|0:0.235:0.779,0.207,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.324:0.052,0.572,0.376	0|0:0.208:0.813,0.165,0.021	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19865578	SNP-3.19864088.	C	A	.	PASS	AR2=0.987;DR2=0.989;AF=0.343	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.946:0.001,0.053,0.946	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.064:0.937,0.061,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.124:0.88,0.116,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.341:0.662,0.335,0.003	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0.031:0.969,0.031,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.108:0.893,0.107,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0.019:0.981,0.018,0	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.08:0.921,0.077,0.002	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0.337:0.67,0.324,0.006	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.215:0.112,0.561,0.327	1|1:2:0,0,1	1|0:1.108:0.084,0.724,0.192	1|0:1.19:0.02,0.77,0.21	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.007:0.993,0.007,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.623:0.034,0.309,0.657	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.019,0	0|0:0:1,0,0	1|1:1.919:0.002,0.078,0.92	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0.041:0.959,0.04,0	0|0:0.002:0.998,0.002,0	0|0:0.024:0.976,0.024,0	1|1:2:0,0,1	0|0:0.007:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.949:0.001,0.05,0.949	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.978,0.022,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0
+3	19866828	SNP-3.19865338.	C	A	.	PASS	AR2=0.995;DR2=0.996;AF=0.352	GT:DS:GP	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.019,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.825:0.003,0.17,0.827	1|1:2:0,0,1	1|1:1.804:0,0.196,0.804	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.805:0.206,0.783,0.011	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.917:0.001,0.081,0.918	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	0|1:0.709:0.294,0.703,0.003	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.022:0.978,0.022,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19866953	SNP-3.19865463.	C	A	.	PASS	AR2=0.984;DR2=0.987;AF=0.354	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.81:0.004,0.181,0.815	0|0:0:1,0,0	0|0:0.089:0.913,0.085,0.002	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.595:0.64,0.125,0.235	0|0:0.084:0.918,0.081,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.084:0.918,0.08,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.082:0.92,0.079,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.028,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.942,0.057,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.948:0,0.051,0.948	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.027,0.972	1|1:2:0,0,1	1|1:1.949:0.001,0.05,0.95	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.978:0.053,0.916,0.031	1|1:2:0,0,1	1|1:1.922:0.001,0.076,0.923	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.947:0.001,0.052,0.948	0|0:0:1,0,0	1|1:1.926:0.002,0.071,0.928	1|1:2:0,0,1	1|1:1.989:0,0.01,0.989	0|0:0.023:0.977,0.023,0	0|1:0.901:0.118,0.864,0.019	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.928:0.003,0.066,0.931	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.959:0,0.04,0.959	1|1:1.96:0,0.04,0.96	1|1:2:0,0,1	1|1:1.973:0,0.027,0.973	1|1:1.958:0,0.042,0.958	1|1:1.926:0.001,0.071,0.927	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.958:0.001,0.039,0.959	0|0:0:1,0,0	0|0:0.037:0.963,0.037,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.952:0.001,0.046,0.953	0|0:0.075:0.926,0.072,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.085:0.917,0.081,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.928,0.071,0.001	0|0:0.062:0.939,0.06,0.001	0|0:0.031:0.969,0.031,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.502:0.018,0.463,0.519	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.084:0.917,0.081,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	0|0:0.018:0.982,0.017,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.956:0.001,0.041,0.958	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19868815	SNP-3.19867325.	C	A	.	PASS	AR2=0.996;DR2=0.996;AF=0.363	GT:DS:GP	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	0|0:0.065:0.936,0.063,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.929,0.07,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.075:0.927,0.072,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.078:0.923,0.075,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.928,0.071,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.945,0.055,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.049:0.952,0.048,0	0|1:0.965:0.054,0.927,0.019	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.008:0.992,0.008,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.072:0.929,0.069,0.001	0|0:0:1,0,0	0|0:0.053:0.948,0.051,0.001	0|0:0.078:0.924,0.075,0.002	0|0:0.076:0.926,0.073,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.946,0.053,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19869761	SNP-3.19868271.	A	G	.	PASS	AR2=0.99;DR2=0.992;AF=0.258	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.118:0.89,0.103,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.958,0.041,0	0|0:0:1,0,0	1|1:1.982:0,0.018,0.982	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.955,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0.063:0.937,0.062,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.031:0.969,0.031,0	0|0:0.053:0.948,0.051,0.001	0|0:0:1,0,0	0|0:0.048:0.953,0.046,0.001	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.079:0.922,0.078,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.044:0.956,0.043,0.001	1|0:1.003:0.001,0.996,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.003:0,0.997,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.957:0.044,0.956,0.001	0|0:0.08:0.92,0.079,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.504:0,0.495,0.505	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.11:0.892,0.106,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.068:0.934,0.064,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.953,0.046,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.053:0.948,0.051,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.063:0.937,0.062,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.951,0.048,0.001	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.096:0.906,0.093,0.001	0|0:0:1,0,0	0|0:0.048:0.954,0.045,0.001	0|0:0.046:0.955,0.044,0.001	0|0:0:1,0,0	1|1:2:0,0,1
+3	19871920	SNP-3.19870430.	A	G	.	PASS	AR2=0.994;DR2=0.995;AF=0.279	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.154:0.852,0.142,0.006	0|0:0.139:0.865,0.13,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.748:0.288,0.677,0.035	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.322:0.693,0.291,0.015	0|0:0.017:0.983,0.017,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.125:0.879,0.117,0.004	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.971:0.001,0.028,0.971	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19871999	SNP-3.19870509.	C	A	.	PASS	AR2=0.937;DR2=0.947;AF=0.248	GT:DS:GP	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:1.087:0.191,0.532,0.278	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.093:0.198,0.511,0.291	1|1:2:0,0,1	0|0:0.016:0.984,0.016,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.916:0.003,0.079,0.918	1|0:1:0,1,0	1|1:1.465:0.053,0.429,0.518	0|0:0.321:0.689,0.301,0.01	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.729:0.013,0.246,0.741	1|0:1:0,1,0	0|0:0.766:0.381,0.473,0.147	1|0:1:0,1,0	1|0:0.751:0.393,0.463,0.144	0|1:0.928:0.283,0.505,0.211	0|0:0.586:0.487,0.44,0.073	1|0:0.443:0.576,0.405,0.019	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.971:0.26,0.51,0.231	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.726:0.407,0.46,0.133	0|1:1.242:0.115,0.528,0.357	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.345:0.072,0.512,0.417	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.076:0.203,0.517,0.279	0|1:1:0,1,0	0|0:0.97:0.26,0.51,0.23	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0.013:0.987,0.013,0	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.922:0.003,0.072,0.925	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.78:0.012,0.196,0.792	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.392:0.062,0.484,0.454	0|0:0:1,0,0	1|1:1.905:0.008,0.079,0.913	0|0:0:1,0,0	1|1:1.985:0,0.014,0.986	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.162:0.182,0.474,0.344	1|1:1.799:0.012,0.177,0.811	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.779:0.371,0.478,0.15	1|1:1.985:0,0.015,0.985	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	19872532	SNP-3.19871042.	C	A	.	PASS	AR2=0.975;DR2=0.979;AF=0.404	GT:DS:GP	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.188:0.821,0.169,0.01	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.181:0.827,0.164,0.008	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.184:0.825,0.167,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.224:0.788,0.2,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.272:0.749,0.231,0.02	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0.21:0.802,0.187,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.126:0.878,0.119,0.003	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0,0.024,0.975	1|1:1.975:0,0.024,0.975	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.037:0.026,0.912,0.062	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	0|0:0.321:0.698,0.283,0.019	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.176:0.832,0.16,0.008	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.196:0.814,0.176,0.01	0|0:0.093:0.909,0.088,0.002	0|0:0:1,0,0	0|0:0.304:0.721,0.255,0.024	0|0:0.12:0.883,0.113,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.192:0.817,0.173,0.009	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.183:0.826,0.166,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.303:0.721,0.255,0.024	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.159:0.848,0.145,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.154:0.85,0.145,0.005	0|0:0.107:0.896,0.102,0.003	0|0:0.078:0.924,0.075,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.184:0.824,0.167,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.184:0.826,0.165,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.194:0.816,0.174,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.226:0.789,0.197,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.317:0.71,0.264,0.026	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19873068	SNP-3.19871578.	C	A	.	PASS	AR2=0.914;DR2=0.934;AF=0.248	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.142:0.865,0.129,0.006	0|1:0.795:0.356,0.493,0.151	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.689:0.425,0.462,0.114	0|1:0.947:0.27,0.513,0.217	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.119:0.886,0.108,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.954:0.239,0.569,0.192	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.2:0.81,0.18,0.01	0|0:0.181:0.821,0.177,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.143:0.861,0.135,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.218:0.794,0.194,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.943:0.277,0.503,0.22	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.279:0.087,0.547,0.366	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.77:0.003,0.223,0.774	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.978:0,0.021,0.978	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.547:0.501,0.45,0.048	0|0:0:1,0,0	0|1:0.716:0.484,0.317,0.2	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.437:0.612,0.339,0.049	0|0:0:1,0,0	1|1:1.107:0.233,0.426,0.34	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.994:0.225,0.557,0.219	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.613:0.034,0.318,0.647	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.363:0.1,0.437,0.463	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.822:0.281,0.616,0.103	0|0:0.432:0.611,0.346,0.043	1|1:1.806:0.011,0.172,0.817	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.891:0.269,0.572,0.159	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.939:0.075,0.912,0.014	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.163:0.845,0.147,0.008	0|0:0.2:0.811,0.179,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.424:0.618,0.34,0.042	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.134:0.871,0.125,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.046:0.954,0.046,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.941:0.001,0.057,0.942	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.279:0.051,0.619,0.33	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.154:0.853,0.139,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.567:0.517,0.399,0.084	0|0:0.563:0.52,0.397,0.083	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.567:0.517,0.399,0.084	0|0:0.565:0.519,0.398,0.083	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.967:0,0.032,0.967	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.975:0,0.024,0.975	1|1:2:0,0,1	0|1:0.901:0.185,0.729,0.086	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.192:0.818,0.173,0.009	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19873396	SNP-3.19871906.	C	A	.	PASS	AR2=0.995;DR2=0.996;AF=0.357	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.955,0.044,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.158:0.848,0.145,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.679:0,0.32,0.68	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.621:0.009,0.362,0.63	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.946:0.002,0.05,0.948	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.952:0.001,0.046,0.953	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.978:0,0.022,0.978	0|0:0:1,0,0
+3	19874408	SNP-3.19872918.	C	A	.	PASS	AR2=0.967;DR2=0.977;AF=0.31	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.032:0.968,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.095:0.905,0.095,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.924:0,0.076,0.924	1|1:1.482:0.066,0.387,0.548	0|1:1.486:0.068,0.378,0.554	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.599:0.042,0.316,0.641	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.532:0.06,0.349,0.591	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.457:0.075,0.393,0.532	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.065:0.937,0.062,0.001	0|1:0.729:0.324,0.622,0.054	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.544:0.044,0.367,0.589	1|1:1.768:0.012,0.208,0.78	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.559:0.002,0.437,0.561	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.949:0.002,0.048,0.951	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.919:0.002,0.077,0.921	1|1:2:0,0,1	1|1:1.527:0.061,0.351,0.588	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.472:0.071,0.386,0.543	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.454:0.052,0.443,0.506	0|0:0:1,0,0
+3	19877262	SNP-3.19875772.	A	G	.	PASS	AR2=0.88;DR2=0.902;AF=0.34	GT:DS:GP	0|1:0.936:0.28,0.503,0.216	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.428:0.597,0.378,0.025	1|1:1.097:0.201,0.501,0.298	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.909:0.323,0.444,0.233	1|1:2:0,0,1	0|1:1.158:0.173,0.497,0.331	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.053:0.221,0.504,0.274	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.13:0.152,0.566,0.282	1|1:1.347:0.108,0.437,0.455	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.436:0.082,0.4,0.518	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.512:0.046,0.396,0.558	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.118:0.193,0.496,0.311	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.188:0.156,0.499,0.345	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.212:0.162,0.465,0.374	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.247:0.144,0.465,0.391	1|1:2:0,0,1	0|1:1.156:0.186,0.472,0.342	0|0:1.189:0.171,0.469,0.36	0|1:1.079:0.225,0.471,0.304	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.799:0.338,0.526,0.137	1|1:1.293:0.135,0.438,0.427	0|0:0.586:0.554,0.306,0.14	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.069:0.219,0.493,0.288	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.076:0.216,0.491,0.292	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.094:0.217,0.473,0.31	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.365:0.113,0.41,0.478	0|0:0:1,0,0	1|1:1.441:0.083,0.393,0.524	1|1:1.648:0.032,0.288,0.68	1|1:1.447:0.092,0.368,0.539	0|1:1.018:0.252,0.477,0.271	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.15:0.181,0.489,0.33	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.333:0.113,0.44,0.446	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.577:0.039,0.345,0.616	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.859:0,0.141,0.859	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.282:0.127,0.465,0.409	0|1:0.625:0.389,0.596,0.015	0|1:1.147:0.186,0.481,0.333	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.172:0.175,0.477,0.348	0|0:0:1,0,0	0|1:1.156:0.174,0.495,0.331	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.268:0.135,0.462,0.403	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.077:0.216,0.491,0.293	0|0:0:1,0,0	1|1:1.142:0.188,0.483,0.329	1|0:1.14:0.189,0.482,0.329	1|1:2:0,0,1	1|0:1.333:0.113,0.44,0.446	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.284:0.138,0.441,0.421	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.123:0.192,0.493,0.315	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.156:0.189,0.467,0.344	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.794:0.028,0.15,0.822	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19879414	SNP-3.19877924.	A	G	.	PASS	AR2=0.99;DR2=0.992;AF=0.236	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.864:0.006,0.124,0.87	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.837:0.004,0.155,0.841	1|1:1.919:0.002,0.077,0.921	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.914:0.002,0.081,0.917	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.7:0.023,0.255,0.723	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.903:0.003,0.091,0.906	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.337:0.017,0.629,0.354	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.846:0.156,0.841,0.002	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.99,0.01,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.856:0.006,0.132,0.862	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.873:0.005,0.118,0.877	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19879842	SNP-3.19878352.	C	A	.	PASS	AR2=0.995;DR2=0.995;AF=0.476	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.059:0.941,0.058,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.056:0.944,0.056,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.12:0.884,0.112,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.123:0.881,0.115,0.004	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.878:0.001,0.119,0.879	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.206:0.798,0.198,0.004	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.789:0.044,0.123,0.833	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.13:0.876,0.119,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.095:0.908,0.09,0.002	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.029:0.971,0.028,0	0|0:0:1,0,0	0|0:0.036:0.965,0.035,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19880957	SNP-3.19879467.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.362	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.954,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	0|0:0.063:0.938,0.062,0	0|1:0.868:0.134,0.865,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0
+3	19881090	SNP-3.19879600.	C	A	.	PASS	AR2=0.987;DR2=0.988;AF=0.332	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.86:0.005,0.13,0.865	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.949:0.001,0.048,0.95	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.945:0.001,0.052,0.947	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.948:0.001,0.049,0.949	1|1:2:0,0,1	1|1:1.942:0.001,0.055,0.943	1|1:1.902:0.002,0.094,0.904	1|1:1.834:0.003,0.16,0.837	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.932:0.002,0.065,0.933	0|0:0:1,0,0	1|1:1.872:0.004,0.12,0.876	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.879:0.004,0.114,0.883	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.073:0.93,0.067,0.003	0|1:0.868:0.14,0.852,0.008	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.868:0.005,0.123,0.872	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.664:0.017,0.302,0.681	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.929:0.001,0.069,0.93	1|1:2:0,0,1	1|1:1.888:0.003,0.106,0.891	1|1:1.829:0.007,0.157,0.836	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.764:0.034,0.168,0.798	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.942:0.001,0.056,0.943	0|0:0:1,0,0	1|1:1.919:0.002,0.078,0.921	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.955:0,0.045,0.955	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.883:0.004,0.109,0.887	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.888:0.003,0.106,0.891	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.966,0.033,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.905:0.003,0.09,0.908	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19885100	SNP-3.19883610.	A	G	.	PASS	AR2=0.98;DR2=0.983;AF=0.242	GT:DS:GP	1|1:1.869:0.006,0.118,0.876	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.871:0.206,0.717,0.077	1|1:2:0,0,1	1|1:1.804:0.009,0.177,0.813	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.803:0.012,0.173,0.815	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.903:0.003,0.092,0.906	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.67:0.028,0.274,0.698	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.693:0.021,0.266,0.713	1|1:1.584:0.038,0.341,0.621	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.18:0.061,0.699,0.24	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.866:0.003,0.127,0.869	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.92:0.002,0.076,0.922	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.897:0.003,0.097,0.9	0|1:1.152:0.094,0.66,0.246	1|1:1.907:0.001,0.091,0.908	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.892:0.003,0.102,0.895	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.887:0.003,0.106,0.89	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.726:0.019,0.236,0.745	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19885279	SNP-3.19883789.	C	A	.	PASS	AR2=0.982;DR2=0.985;AF=0.379	GT:DS:GP	1|1:2:0,0,1	1|1:1.871:0.002,0.125,0.873	1|1:2:0,0,1	1|1:1.675:0.013,0.3,0.687	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.929:0.001,0.069,0.93	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.123:0.881,0.115,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.038:0.963,0.036,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.955,0.044,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.088:0.914,0.084,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.147:0.855,0.143,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.046:0.955,0.045,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.957,0.043,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.391:0.619,0.372,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.119:0.885,0.111,0.004	0|0:0.067:0.934,0.065,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.149:0.856,0.14,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.908:0.001,0.09,0.909	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.031:0.969,0.031,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.797:0.01,0.183,0.807	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0,0.032,0.968	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.125:0.88,0.116,0.004	0|0:0.094:0.908,0.089,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.288:0.77,0.172,0.058	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.074:0.092,0.743,0.166	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.956,0.043,0	0|0:0.088:0.915,0.083,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.032:0.968,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.094:0.908,0.09,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.951,0.048,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.094:0.907,0.092,0.001	0|0:0.356:0.653,0.338,0.009	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.951,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:1.997:0,0.003,0.997	1|1:1.997:0,0.003,0.997	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.886:0.015,0.085,0.9	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.094:0.909,0.089,0.003
+3	19885950	SNP-3.19884460.	C	A	.	PASS	AR2=0.976;DR2=0.981;AF=0.406	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.252:0.764,0.219,0.016	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.141:0.874,0.11,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.354:0.649,0.348,0.003	0|0:0.204:0.806,0.183,0.011	0|0:0.277:0.743,0.238,0.019	0|0:0:1,0,0	0|0:0.311:0.712,0.265,0.023	0|1:1:0,1,0	0|0:0.284:0.737,0.243,0.02	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0.315:0.708,0.268,0.024	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.279:0.747,0.227,0.026	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.022:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.145:0.86,0.135,0.005	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:1.978:0,0.022,0.978	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	1|1:1.984:0,0.016,0.984	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.975:0,0.024,0.975	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.555:0.502,0.441,0.057	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.235:0.778,0.208,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.152:0.855,0.139,0.006	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.11:0.894,0.102,0.004	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.15:0.856,0.138,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.301:0.733,0.234,0.033	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.032,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.3:0.727,0.246,0.027	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.13:0.874,0.121,0.004	0|0:0:1,0,0	0|0:0.131:0.874,0.122,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.09:0.913,0.085,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19886370	SNP-3.19884880.	C	A	.	PASS	AR2=0.981;DR2=0.985;AF=0.376	GT:DS:GP	0|0:0.127:0.877,0.12,0.004	1|1:2:0,0,1	0|0:0.103:0.9,0.098,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.099:0.904,0.094,0.003	0|0:0:1,0,0	0|0:0.166:0.842,0.149,0.008	0|0:0:1,0,0	0|0:0.092:0.91,0.088,0.002	0|0:0.096:0.906,0.092,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.074:0.928,0.07,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.168:0.842,0.147,0.011	0|0:0.37:0.63,0.37,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.163:0.844,0.149,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.61:0.542,0.306,0.152	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.154:0.852,0.141,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.105:0.901,0.093,0.006	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.164:0.843,0.15,0.007	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.396:0.63,0.343,0.026	0|1:0.822:0.263,0.651,0.085	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.14:0.866,0.128,0.006	1|0:1:0,1,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.184:0.824,0.168,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.147:0.858,0.136,0.006	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19886609	SNP-3.19885119.	C	A	.	PASS	AR2=0.987;DR2=0.989;AF=0.302	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:0.875:0.214,0.697,0.089	1|0:1:0,1,0	0|1:1:0,1,0	1|0:1.024:0.09,0.796,0.114	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.918:0.002,0.078,0.92	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.729:0.015,0.242,0.744	0|1:1:0,1,0	1|1:1.777:0.012,0.199,0.789	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.927:0.002,0.069,0.929	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.833:0.009,0.15,0.842	1|1:1.548:0.037,0.378,0.585	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.854:0.005,0.136,0.859	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.889:0.002,0.106,0.892	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.871:0.004,0.121,0.875	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.818:0.009,0.164,0.827	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.933:0.001,0.065,0.934	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.007:0.994,0.006,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	19886701	SNP-3.19885211.	C	A	.	PASS	AR2=0.988;DR2=0.992;AF=0.317	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.982:0,0.017,0.983	1|1:1.76:0.008,0.223,0.768	1|1:1.84:0.006,0.148,0.846	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.519:0.086,0.309,0.605	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.989:0,0.011,0.989	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	1|1:1.98:0,0.019,0.98	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1.321:0.133,0.413,0.454	0|1:1:0,1,0	1|1:1.703:0.011,0.275,0.714	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.909:0.002,0.086,0.912	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.947:0.001,0.05,0.949	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19887075	SNP-3.19885585.	A	G	.	PASS	AR2=0.99;DR2=0.992;AF=0.285	GT:DS:GP	1|1:2:0,0,1	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.771:0,0.229,0.771	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.995:0,0.005,0.995	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.052:0.948,0.052,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.225:0.781,0.213,0.006	0|0:0.435:0.607,0.351,0.042	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.126:0.879,0.116,0.005	0|0:0.105:0.898,0.1,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.037:0.963,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0.013:0.988,0.012,0	0|0:0.036:0.964,0.036,0	0|0:0.043:0.957,0.043,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.125:0.88,0.116,0.004	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	1|1:2:0,0,1	0|0:0.153:0.855,0.137,0.008	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.031:0.969,0.031,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.985:0,0.015,0.985	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999
+3	19887290	SNP-3.19885800.	A	G	.	PASS	AR2=0.902;DR2=0.923;AF=0.363	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.501:0.562,0.375,0.063	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.502:0.543,0.411,0.045	0|0:0.378:0.657,0.308,0.035	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.341:0.69,0.28,0.03	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.391:0.645,0.318,0.037	0|0:0.204:0.813,0.169,0.017	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.506:0.562,0.37,0.068	0|0:0.373:0.662,0.303,0.035	0|0:0.34:0.69,0.28,0.03	0|1:1:0,1,0	0|0:0.388:0.65,0.312,0.038	0|0:0.43:0.617,0.336,0.047	0|0:0:1,0,0	0|0:0.482:0.591,0.335,0.074	0|0:0.582:0.491,0.436,0.073	0|0:0.401:0.638,0.323,0.039	0|0:0.37:0.665,0.3,0.035	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.316:0.708,0.267,0.024	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.324:0.701,0.274,0.025	1|1:2:0,0,1	1|0:1.377:0.066,0.49,0.444	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.041:0.233,0.493,0.274	0|0:0:1,0,0	0|1:1.53:0.003,0.464,0.533	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.009:0.251,0.49,0.26	0|1:1.041:0.233,0.493,0.274	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:0.93:0.287,0.496,0.217	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.288:0.736,0.24,0.024	1|0:1.001:0.258,0.482,0.259	0|1:1.041:0.233,0.493,0.274	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.318:0.708,0.266,0.026	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.348:0.682,0.288,0.03	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.922:0.291,0.496,0.213	0|0:0.216:0.796,0.192,0.012	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.041:0.233,0.493,0.274	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.405:0.637,0.322,0.042	0|0:0.334:0.695,0.275,0.029	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.292:0.733,0.242,0.025	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.965:0.267,0.5,0.232	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.311:0.715,0.26,0.025	0|0:0:1,0,0	0|0:0.373:0.662,0.303,0.035	0|0:0:1,0,0	0|0:0.509:0.558,0.376,0.066	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.336:0.693,0.278,0.029	0|0:0.405:0.637,0.322,0.042	0|0:0.355:0.677,0.291,0.032	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.249:0.768,0.215,0.017	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.214:0.799,0.189,0.012	1|1:2:0,0,1	0|0:0.214:0.798,0.189,0.012	0|0:0:1,0,0	0|0:0.214:0.799,0.189,0.012	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.304:0.721,0.255,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.041:0.233,0.493,0.274	0|0:0.358:0.676,0.291,0.034	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19887468	SNP-3.19885978.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.364	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.929,0.07,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.959,0.04,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.088:0.914,0.085,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.051:0.951,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19887739	SNP-3.19886249.	C	A	.	PASS	AR2=0.955;DR2=0.963;AF=0.408	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.126:0.878,0.119,0.003	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.494:0.533,0.441,0.027	0|0:0.145:0.86,0.135,0.005	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.124:0.881,0.115,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.072:0.93,0.069,0.001	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.145:0.859,0.136,0.005	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.487:0.595,0.322,0.083	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.091:0.911,0.087,0.002	0|0:0:1,0,0	0|0:0.044:0.956,0.043,0.001	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.085:0.917,0.081,0.002	0|0:0:1,0,0	0|0:0.074:0.927,0.072,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.073:0.928,0.071,0.001	0|0:0:1,0,0	0|0:0.053:0.948,0.051,0.001	0|0:0.049:0.952,0.048,0.001	0|0:0.129:0.876,0.119,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.046:0.955,0.044,0.001	1|1:1.436:0.105,0.354,0.541	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.095:0.22,0.465,0.315	1|0:1:0,1,0	0|0:0:1,0,0	1|0:0.927:0.289,0.496,0.215	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.318:0.7,0.283,0.018	0|0:0.067:0.934,0.065,0.001	0|0:0.085:0.917,0.082,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.374:0.642,0.343,0.015	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.128:0.19,0.492,0.318	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.673:0.409,0.508,0.082	0|0:0.573:0.471,0.484,0.044	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.02:0.236,0.508,0.256	0|0:0.069:0.932,0.066,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:0.918:0.306,0.469,0.225	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.932,0.067,0.001	0|0:0:1,0,0	0|0:0.056:0.945,0.055,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.815:0.337,0.51,0.152	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.939:0.282,0.497,0.221	0|0:0.069:0.932,0.066,0.001	0|0:0.284:0.755,0.206,0.039	0|0:0:1,0,0	1|0:0.495:0.516,0.473,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.033,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.949:0.254,0.542,0.204	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.083:0.918,0.08,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.02:0.981,0.019,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19887755	SNP-3.19886265.	C	A	.	PASS	AR2=0.995;DR2=0.996;AF=0.328	GT:DS:GP	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.961:0,0.038,0.961	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.929:0.001,0.07,0.93	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.152:0.848,0.152,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.014:0.986,0.014,0	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.529:0.054,0.364,0.583	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.787:0.023,0.166,0.81	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19891404	SNP-3.19889914.	A	G	.	PASS	AR2=0.968;DR2=0.98;AF=0.299	GT:DS:GP	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.231:0.798,0.173,0.029	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.169:0.839,0.152,0.009	0|0:0:1,0,0	0|0:0.128:0.878,0.117,0.005	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.531:0.48,0.508,0.011	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.346:0.135,0.384,0.481	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.116:0.889,0.106,0.005	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.124:0.303,0.271,0.426	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.27:0.17,0.39,0.44	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:0.94:0.152,0.757,0.092	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.137:0.867,0.129,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.992:0,0.008,0.992	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.175:0.836,0.152,0.012	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.105:0.897,0.1,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.108:0.894,0.105,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.115:0.888,0.109,0.003	0|0:0.214:0.793,0.2,0.007	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.879:0.004,0.112,0.884	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19892516	SNP-3.19891026.	C	A	.	PASS	AR2=0.956;DR2=0.964;AF=0.297	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.867:0.005,0.123,0.872	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0.04:0.961,0.038,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.752:0.015,0.219,0.767	0|0:0:1,0,0	1|1:1.872:0.005,0.119,0.877	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.167:0.116,0.6,0.284	1|1:2:0,0,1	1|1:1.659:0.028,0.286,0.687	0|0:0:1,0,0	1|1:1.776:0.01,0.203,0.787	1|1:1.691:0.025,0.259,0.716	1|1:1.701:0.023,0.252,0.725	1|1:1.764:0.012,0.212,0.776	1|1:1.896:0.003,0.098,0.899	1|1:2:0,0,1	1|1:1.884:0.003,0.109,0.888	1|0:1.461:0.132,0.276,0.592	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.118:0.05,0.782,0.168	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.884:0.004,0.109,0.888	0|0:0:1,0,0	0|0:0.671:0.428,0.473,0.099	0|0:0:1,0,0	1|1:1.452:0.037,0.474,0.489	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.059:0.943,0.056,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.736:0.018,0.229,0.754	1|1:1.907:0.003,0.088,0.91	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.223:0.1,0.578,0.322	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.299:0.044,0.614,0.343	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.056:0.945,0.053,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	0|0:0.037:0.963,0.037,0	0|0:0.047:0.953,0.046,0.001	0|0:0.045:0.956,0.044,0	1|1:2:0,0,1	1|1:1.841:0.007,0.145,0.848	1|1:2:0,0,1	1|1:1.958:0.001,0.039,0.96	0|0:0.039:0.962,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.88:0.004,0.113,0.883	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.602:0.028,0.342,0.63	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.955,0.044,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.896:0.003,0.099,0.898	1|1:1.896:0.003,0.098,0.899	1|1:2:0,0,1	1|1:1.895:0.003,0.099,0.898	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.95:0.002,0.047,0.952	0|0:0:1,0,0	1|1:1.854:0.006,0.135,0.859	1|1:1.896:0.003,0.098,0.899	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.238:0.057,0.649,0.294	1|1:1.859:0.006,0.129,0.865	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.12:0.087,0.705,0.208	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.755:0.013,0.219,0.768	0|0:0.038:0.963,0.037,0
+3	19892740	SNP-3.19891250.	C	A	.	PASS	AR2=0.962;DR2=0.969;AF=0.278	GT:DS:GP	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.949:0.148,0.754,0.098	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.532:0.041,0.386,0.573	1|1:2:0,0,1	1|0:1.03:0.213,0.545,0.242	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.102:0.176,0.546,0.278	1|1:1.625:0.035,0.304,0.661	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.628:0.03,0.313,0.657	0|1:1.352:0.096,0.456,0.448	1|1:2:0,0,1	1|1:1.76:0.008,0.225,0.768	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.762:0.01,0.219,0.772	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.822:0.023,0.133,0.844	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.765:0.017,0.202,0.782	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.697:0.023,0.258,0.719	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.906:0.002,0.09,0.908	1|1:1.932:0.002,0.065,0.934	1|1:1.901:0.002,0.094,0.903	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.961:0.002,0.035,0.963	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.824:0.349,0.478,0.173	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.772:0.017,0.194,0.789	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.409:0.044,0.504,0.453	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.804:0.391,0.415,0.194	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.933:0.002,0.064,0.934	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.616:0.033,0.317,0.649	0|0:0:1,0,0
+3	19895384	SNP-3.19893894.	A	G	.	PASS	AR2=0.872;DR2=0.903;AF=0.312	GT:DS:GP	0|1:0.555:0.494,0.456,0.05	0|0:0:1,0,0	0|0:0.441:0.623,0.313,0.064	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.964:0.275,0.485,0.239	0|1:1.059:0.232,0.478,0.291	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.996:0.209,0.586,0.205	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.9:0.274,0.551,0.175	0|1:0.95:0.243,0.565,0.192	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.423:0.051,0.475,0.474	0|0:0:1,0,0	1|1:1.69:0.013,0.283,0.704	1|1:2:0,0,1	1|0:1.456:0.058,0.429,0.513	1|1:1.287:0.121,0.471,0.408	0|1:1.398:0.093,0.416,0.491	0|0:0:1,0,0	1|1:1.227:0.148,0.478,0.375	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.404:0.654,0.287,0.058	0|0:0:1,0,0	1|1:1.171:0.175,0.479,0.346	1|1:1.17:0.176,0.479,0.346	1|1:2:0,0,1	1|0:1.29:0.129,0.453,0.418	0|0:0:1,0,0	1|1:1.325:0.122,0.432,0.447	1|1:1.294:0.129,0.447,0.424	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.284:0.756,0.205,0.04	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.258:0.781,0.179,0.039	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.322:0.124,0.43,0.446	0|1:1.209:0.161,0.468,0.37	1|0:0.89:0.281,0.547,0.172	1|1:2:0,0,1	1|0:1.167:0.169,0.495,0.336	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.285:0.724,0.266,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.344:0.672,0.312,0.016	1|0:1.115:0.201,0.483,0.316	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.935,0.061,0.004	0|0:0:1,0,0	1|1:1.475:0.077,0.37,0.552	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	1|1:1.53:0.056,0.357,0.586	0|0:0.031:0.969,0.03,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.704:0.324,0.648,0.028	0|0:0:1,0,0	1|1:1.395:0.074,0.457,0.469	0|0:0.291:0.747,0.215,0.038	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.012:0.988,0.012,0	0|1:1.264:0.122,0.492,0.386	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.036:0.965,0.034,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.906:0.322,0.45,0.228	1|1:2:0,0,1	1|1:1.711:0.016,0.257,0.727	0|0:0.069:0.933,0.066,0.002	1|1:2:0,0,1	0|0:0.3:0.741,0.219,0.041	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.253:0.135,0.476,0.389	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.21:0.156,0.478,0.366	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.38:0.1,0.42,0.48	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.059:0.942,0.058,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	1|1:1.395:0.094,0.418,0.489	0|0:0:1,0,0	1|1:2:0,0,1	0|0:1.138:0.191,0.48,0.329	1|1:1.617:0.043,0.296,0.661	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.453:0.075,0.397,0.528	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.326:0.122,0.431,0.448	1|1:1.895:0.005,0.095,0.9	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.39:0.68,0.25,0.07	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.875:0.007,0.111,0.882	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.023,0	1|1:1.433:0.089,0.389,0.522
+3	19899833	SNP-3.19898343.	C	A	.	PASS	AR2=0.969;DR2=0.978;AF=0.427	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.203:0.8,0.196,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.01:0.02,0.95,0.03	1|1:1.475:0.072,0.381,0.547	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.125:0.876,0.122,0.001	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.842:0.007,0.145,0.849	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.627:0.041,0.291,0.668	1|1:1.852:0.006,0.137,0.857	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.803:0.01,0.177,0.813	1|1:1.859:0.001,0.139,0.86	0|1:0.851:0.21,0.728,0.062	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.404:0.092,0.413,0.496	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.044:0.957,0.041,0.001	1|1:1.933:0.002,0.063,0.935	1|1:1.596:0.042,0.319,0.638	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.855:0.011,0.124,0.865	0|1:1.404:0.092,0.413,0.496	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.673:0.029,0.268,0.702	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.404:0.092,0.413,0.496	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.789:0.001,0.209,0.79	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.938:0.002,0.058,0.94	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.485:0.049,0.418,0.534	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0.063:0.939,0.059,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.947,0.052,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.94:0.002,0.057,0.941	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.192:0.829,0.15,0.021	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19901647	SNP-3.19900157.	C	A	.	PASS	AR2=0.958;DR2=0.965;AF=0.296	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.377:0.085,0.453,0.462	1|1:2:0,0,1	1|1:1.096:0.209,0.486,0.305	1|1:2:0,0,1	0|1:0.908:0.17,0.752,0.078	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1.006:0.248,0.498,0.254	1|0:1.023:0.243,0.491,0.266	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.984:0.261,0.493,0.245	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:0.754:0.313,0.62,0.067	0|0:0:1,0,0	1|1:1.908:0.001,0.089,0.909	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.047:0.953,0.047,0	1|1:1.944:0.001,0.054,0.945	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1.216:0.127,0.53,0.343	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.619:0.023,0.336,0.641	1|1:1.613:0.037,0.313,0.65	0|0:0.343:0.687,0.283,0.03	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.866:0.004,0.127,0.87	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.3:0.721,0.258,0.021	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.018:0.243,0.496,0.261	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.343:0.687,0.283,0.03	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.821:0.01,0.158,0.831	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.919:0.002,0.078,0.92	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.343:0.687,0.283,0.03	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.119:0.183,0.514,0.302	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.601:0.023,0.353,0.624	0|0:0:1,0,0
+3	19902294	SNP-3.19900804.	C	A	.	PASS	AR2=0.976;DR2=0.983;AF=0.341	GT:DS:GP	0|0:0.022:0.978,0.022,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:1.815:0,0.184,0.816	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.015:0.985,0.015,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.324:0.708,0.261,0.032	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.902:0.003,0.091,0.905	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.89:0.003,0.103,0.893	1|1:1.8:0.008,0.184,0.808	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.022:0.978,0.022,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.058:0.942,0.058,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.858:0.004,0.133,0.863	0|0:0:1,0,0	0|0:0.034:0.967,0.032,0.001	0|0:0:1,0,0	0|0:0.474:0.583,0.361,0.056	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.932:0.001,0.066,0.933	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.423:0.62,0.336,0.043	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.474:0.583,0.361,0.056	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.474:0.583,0.361,0.056	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.474:0.583,0.361,0.056	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.961:0,0.038,0.961	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.086:0.914,0.086,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.474:0.583,0.361,0.056	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.927:0.001,0.071,0.928	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.815:0.008,0.169,0.823	0|0:0:1,0,0
+3	19904535	SNP-3.19903045.	A	G	.	PASS	AR2=0.958;DR2=0.973;AF=0.346	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.664:0.044,0.249,0.708	1|1:2:0,0,1	1|1:1.89:0.015,0.08,0.905	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.531:0.058,0.353,0.589	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.106:0.901,0.093,0.007	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.528:0.003,0.466,0.531	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.373:0.111,0.405,0.484	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:1.374:0.111,0.404,0.485	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.672:0.031,0.267,0.702	1|1:2:0,0,1	1|1:1.444:0.086,0.385,0.53	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.887:0.005,0.102,0.893	1|1:1.373:0.111,0.405,0.484	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.724:0.021,0.235,0.744	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.373:0.111,0.405,0.484	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.373:0.111,0.405,0.484	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.544:0.038,0.38,0.582	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.373:0.111,0.405,0.484	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.373:0.111,0.405,0.484	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.226:0.799,0.175,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19905964	SNP-3.19904474.	C	A	.	PASS	AR2=1;DR2=1;AF=0.34	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.984:0,0.015,0.984	0|0:0:1,0,0
+3	19906300	SNP-3.19904810.	C	A	.	PASS	AR2=0.979;DR2=0.985;AF=0.422	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.792:0.011,0.187,0.803	0|0:0:1,0,0	1|1:1.787:0.012,0.188,0.8	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.836:0.007,0.151,0.842	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.768:0.014,0.203,0.782	0|0:0.273:0.731,0.264,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.789:0.011,0.19,0.799	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.794:0.011,0.184,0.805	0|0:0.004:0.996,0.004,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.08:0.922,0.076,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.3:0.141,0.418,0.441	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.972:0.169,0.689,0.141	0|0:0.552:0.549,0.349,0.102	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.405:0.114,0.367,0.519	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.214:0.796,0.193,0.01	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.18:0.82,0.18,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.926,0.072,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.98:0.129,0.762,0.109	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19906507	SNP-3.19905017.	A	G	.	PASS	AR2=0.982;DR2=0.985;AF=0.53	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.054:0.234,0.478,0.288	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.943:0.001,0.056,0.943	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.985:0,0.015,0.985	1|1:1.957:0.001,0.042,0.958	1|1:1.919:0.002,0.078,0.921	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.658:0.008,0.326,0.666	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:1.999:0,0.001,0.999	1|1:1.991:0,0.009,0.991	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0:1,0,0	1|1:1.948:0,0.052,0.948	1|1:1.909:0.001,0.089,0.91	1|1:1.874:0.005,0.116,0.879	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.946:0.001,0.053,0.946	1|1:1.938:0.001,0.06,0.939	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.955:0.001,0.044,0.956	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.971:0,0.029,0.971	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.974:0,0.025,0.974	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.74:0.01,0.241,0.75	1|1:1.917:0.001,0.081,0.918	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.76:0.032,0.176,0.792	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.909:0.001,0.089,0.91	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.49:0.57,0.37,0.06	0|1:1.202:0.17,0.458,0.372	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.907:0.004,0.086,0.91	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.175:0.826,0.173,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.975:0,0.025,0.975	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.867:0.005,0.123,0.872	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.776:0.011,0.201,0.787	0|0:0:1,0,0	1|1:1.971:0,0.028,0.972	1|1:1.952:0.001,0.047,0.952	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.93:0.001,0.067,0.932	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0,0.024,0.976	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.962:0,0.037,0.963
+3	19906601	SNP-3.19905111.	C	A	.	PASS	AR2=0.999;DR2=0.999;AF=0.344	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.008:0.992,0.008,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|0:0.808:0.192,0.808,0	0|0:0.096:0.904,0.096,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19906624	SNP-3.19905134.	A	G	.	PASS	AR2=1;DR2=1;AF=0.251	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19907698	SNP-3.19906208.	C	A	.	PASS	AR2=0.998;DR2=0.999;AF=0.334	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.916:0.002,0.081,0.917	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.972:0,0.028,0.972	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.87:0.013,0.103,0.884	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.932:0.001,0.065,0.933	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19908511	SNP-3.19907021.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.251	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.904:0.003,0.09,0.907	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.974:0,0.025,0.975	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.013:0.987,0.013,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.021,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.995:0,0.005,0.995	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19908967	SNP-3.19907477.	A	G	.	PASS	AR2=0.989;DR2=0.991;AF=0.225	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.854:0.005,0.136,0.859	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.551:0.012,0.426,0.562	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.173:0.834,0.158,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.189:0.82,0.171,0.009	0|0:0.166:0.841,0.152,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.101:0.902,0.095,0.003	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.177:0.831,0.16,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.222:0.8,0.178,0.022	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19909565	SNP-3.19908075.	A	G	.	PASS	AR2=0.979;DR2=0.983;AF=0.477	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:0.731:0.408,0.454,0.138	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.662:0.04,0.258,0.702	1|1:2:0,0,1	1|0:1.677:0.027,0.269,0.704	1|1:1.623:0.045,0.286,0.669	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.866:0.323,0.488,0.189	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.855:0.006,0.132,0.862	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.886:0.004,0.106,0.89	1|0:0.886:0.31,0.494,0.196	1|1:1.623:0.037,0.302,0.66	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.969:0,0.031,0.969	1|1:1.952:0.001,0.047,0.953	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0.037:0.963,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.958,0.042,0.001	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.097:0.904,0.096,0.001	0|0:0.047:0.953,0.046,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.66:0.038,0.264,0.698	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.748:0.011,0.23,0.759	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.962:0,0.037,0.962	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.869:0.005,0.121,0.874	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.859:0.006,0.128,0.866	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	19909852	SNP-3.19908362.	C	A	.	PASS	AR2=0.979;DR2=0.984;AF=0.32	GT:DS:GP	0|0:0:1,0,0	1|1:1.95:0.001,0.049,0.95	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.726:0.023,0.229,0.749	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.481:0.022,0.476,0.502	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.101:0.901,0.097,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.033:0.967,0.032,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0.037:0.963,0.037,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.987,0.013,0	0|0:0.03:0.97,0.03,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.239:0.218,0.325,0.457	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.826:0.007,0.16,0.833	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.823:0.008,0.16,0.831	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.813:0.007,0.174,0.82	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.164:0.84,0.156,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.053:0.947,0.053,0	1|1:1.952:0.001,0.046,0.953	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.818:0.007,0.167,0.826	1|1:2:0,0,1	1|0:0.941:0.071,0.916,0.013	0|0:0.319:0.701,0.279,0.02	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.972:0,0.027,0.973	1|1:2:0,0,1	1|1:1.93:0.001,0.068,0.931	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.866:0.007,0.12,0.873	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.714:0.022,0.242,0.736	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.919:0.002,0.078,0.92	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.867:0.003,0.127,0.87	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.973:0,0.026,0.974	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0,0.024,0.976	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.977:0,0.022,0.978	1|1:1.974:0,0.025,0.974	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19917770	SNP-3.19916280.	C	A	.	PASS	AR2=0.994;DR2=0.995;AF=0.354	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.972:0,0.028,0.972	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.051:0.951,0.048,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.855:0.148,0.85,0.002	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.996:0,0.004,0.996	0|0:0.316:0.687,0.31,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.005:0.995,0.005,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.022:0.019,0.941,0.041	0|0:0.482:0.611,0.296,0.093	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.054:0.946,0.054,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.982:0,0.018,0.982	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.017,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:1.968:0,0.032,0.968	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19917982	SNP-3.19916492.	A	G	.	PASS	AR2=0.958;DR2=0.969;AF=0.338	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.632:0.462,0.444,0.094	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.759:0.386,0.469,0.145	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0.303:0.72,0.256,0.024	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.277:0.744,0.234,0.021	1|1:2:0,0,1	0|0:0.528:0.543,0.387,0.071	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.219:0.794,0.193,0.013	0|0:0.189:0.823,0.166,0.012	0|0:0:1,0,0	0|0:0.578:0.513,0.397,0.09	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.557:0.518,0.408,0.075	0|0:0.211:0.807,0.176,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.953,0.047,0.001	0|0:0:1,0,0	0|0:0.053:0.947,0.052,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.966,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.033:0.967,0.033,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.314:0.73,0.226,0.044	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.751:0.378,0.493,0.129	0|0:0:1,0,0	0|0:0.138:0.862,0.138,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.202:0.815,0.169,0.016	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.03:0.97,0.029,0.001	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.03:0.97,0.029,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.224:0.79,0.197,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.2:0.813,0.174,0.013	0|0:0:1,0,0	0|0:0.324:0.702,0.273,0.026	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.256:0.762,0.219,0.018	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.211:0.803,0.182,0.014	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.203:0.81,0.177,0.013	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.185:0.827,0.161,0.012	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.347:0.686,0.282,0.032	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	19918171	SNP-3.19916681.	C	A	.	PASS	AR2=0.964;DR2=0.97;AF=0.403	GT:DS:GP	0|0:0:1,0,0	1|1:1.813:0.01,0.168,0.822	0|0:0:1,0,0	1|1:1.88:0.003,0.113,0.883	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.258:0.141,0.459,0.399	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.868:0.003,0.125,0.871	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.053:0.951,0.046,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.97:0.001,0.029,0.97	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.924:0.003,0.07,0.927	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.01:0.99,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.992:0,0.008,0.992	1|0:1.26:0.141,0.458,0.401	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.969:0,0.03,0.969	1|1:2:0,0,1	1|1:1.235:0.146,0.472,0.381	0|1:1:0,1,0	0|1:1.247:0.145,0.463,0.392	1|0:1.247:0.141,0.47,0.389	1|1:2:0,0,1	0|1:1.257:0.141,0.461,0.398	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1.251:0.145,0.459,0.396	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.873:0.003,0.121,0.876	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.475:0.061,0.404,0.536	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.578:0.033,0.357,0.61	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.013,0.987	1|1:1.879:0.003,0.116,0.881	1|0:1:0,1,0	1|1:1.934:0.001,0.065,0.934	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.914:0.002,0.082,0.916	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.923:0.002,0.073,0.925	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.194:0.165,0.475,0.36	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.931:0.002,0.066,0.933	1|1:1.74:0.015,0.231,0.755	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.977:0,0.023,0.977	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.047:0.202,0.549,0.249	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.975:0,0.024,0.976	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.474:0.022,0.481,0.496	0|0:0:1,0,0
+3	19918273	SNP-3.19916783.	A	G	.	PASS	AR2=0.86;DR2=0.892;AF=0.236	GT:DS:GP	0|0:0.695:0.429,0.448,0.124	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.043:0.957,0.042,0.001	0|1:1.088:0.201,0.511,0.289	0|0:0.415:0.619,0.348,0.033	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.085:0.22,0.476,0.305	0|0:0.277:0.745,0.233,0.022	0|0:0.455:0.588,0.369,0.043	0|0:0.248:0.766,0.219,0.014	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.56:0.493,0.455,0.053	0|1:1.031:0.236,0.498,0.266	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.131:0.874,0.122,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.094:0.909,0.088,0.003	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.223:0.787,0.202,0.01	0|0:0.183:0.826,0.166,0.008	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.45:0.571,0.408,0.021	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.579:0.49,0.442,0.069	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.532:0.54,0.389,0.072	1|1:2:0,0,1	0|0:0.425:0.587,0.402,0.012	0|0:0.002:0.998,0.002,0	0|1:0.611:0.486,0.417,0.097	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.901:0.005,0.09,0.905	0|0:0.698:0.436,0.429,0.134	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.345:0.11,0.434,0.455	0|1:0.95:0.051,0.948,0.001	0|0:0.299:0.722,0.257,0.021	0|0:0:1,0,0	0|0:0.108:0.896,0.1,0.004	1|1:2:0,0,1	1|0:1.101:0.18,0.539,0.281	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.166:0.842,0.151,0.008	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.605:0.477,0.441,0.082	0|1:0.967:0.251,0.531,0.218	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.698:0.304,0.694,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.336:0.678,0.308,0.014	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.159:0.162,0.516,0.322	0|0:0:1,0,0	0|0:0.125:0.877,0.121,0.002	0|1:1.137:0.18,0.504,0.316	0|0:0.033:0.967,0.032,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.071:0.93,0.069,0.001	1|1:2:0,0,1	0|0:0.483:0.523,0.471,0.006	0|1:1.064:0.16,0.616,0.224	1|1:1.044:0.2,0.556,0.244	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.593:0.461,0.486,0.053	1|1:2:0,0,1	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.286:0.721,0.272,0.007	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.009:0.991,0.009,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.197:0.816,0.17,0.013	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.121:0.883,0.113,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.419:0.598,0.385,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.452:0.554,0.439,0.007	0|0:0:1,0,0	0|0:0.413:0.6,0.386,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.86:0.288,0.565,0.147	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.17:0.163,0.504,0.333	0|0:0.1:0.903,0.093,0.003	0|0:0:1,0,0	1|0:1.008:0.249,0.494,0.257	0|0:0.185:0.829,0.158,0.013	0|0:0.39:0.632,0.346,0.022	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.071:0.929,0.071,0	0|0:0.307:0.716,0.261,0.023	0|0:0:1,0,0	0|0:0.21:0.801,0.189,0.011	0|1:0.955:0.281,0.484,0.236	0|0:0:1,0,0	1|0:0.614:0.425,0.535,0.04	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.72:0.395,0.49,0.115	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.339:0.672,0.318,0.01	0|0:0.019:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.129:0.876,0.119,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.225:0.793,0.189,0.018	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.094:0.908,0.089,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.212:0.807,0.173,0.019	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	19918600	SNP-3.19917110.	C	A	.	PASS	AR2=0.987;DR2=0.991;AF=0.341	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.998:0,0.002,0.998	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.388:0.009,0.594,0.397	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.086:0.916,0.082,0.002	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	0|0:0.04:0.961,0.038,0.001	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.831:0,0.169,0.831	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.017:0.983,0.017,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.044:0.172,0.612,0.216	1|1:2:0,0,1	1|1:1.717:0.011,0.261,0.728	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.936:0.002,0.059,0.939	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.497:0.513,0.476,0.01	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.95,0.049,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.987:0,0.013,0.987	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.718:0.005,0.271,0.724	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.686:0.006,0.302,0.692	0|0:0:1,0,0
+3	19918707	SNP-3.19917217.	A	G	.	PASS	AR2=0.914;DR2=0.934;AF=0.411	GT:DS:GP	0|0:0.806:0.358,0.478,0.164	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.52:0.057,0.365,0.578	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.67:0.441,0.448,0.111	1|1:1.717:0.021,0.242,0.738	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.594:0.04,0.325,0.635	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.793:0.009,0.188,0.802	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.552:0.05,0.347,0.602	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.561:0.048,0.343,0.609	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.738:0.018,0.225,0.756	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.948:0.001,0.05,0.949	1|0:1.232:0.136,0.496,0.368	1|1:1.484:0.034,0.447,0.519	1|1:1.92:0.002,0.076,0.922	0|0:0.216:0.797,0.189,0.013	0|0:0.395:0.647,0.311,0.042	1|0:0.693:0.431,0.444,0.125	0|0:0.697:0.427,0.449,0.124	0|0:0:1,0,0	0|0:0.569:0.51,0.411,0.079	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.142:0.862,0.133,0.005	0|0:0:1,0,0	0|1:0.83:0.352,0.466,0.182	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1.201:0.163,0.474,0.363	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.659:0.029,0.283,0.688	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.464:0.589,0.358,0.053	0|0:0:1,0,0	1|0:0.675:0.442,0.441,0.117	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.861:0.331,0.477,0.192	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.262:0.743,0.253,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.989:0,0.011,0.989	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.749:0.017,0.217,0.766	0|1:1:0,1,0	1|0:0.808:0.343,0.506,0.151	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.834:0.01,0.146,0.844	1|1:1.564:0.047,0.341,0.612	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.552:0.052,0.344,0.604	1|1:2:0,0,1	1|1:1.554:0.05,0.346,0.604	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:0.831:0.345,0.479,0.176	1|1:1.128:0.184,0.504,0.312	1|0:0.764:0.379,0.479,0.143	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.711:0.419,0.451,0.13	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.425:0.62,0.336,0.045	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.683:0.437,0.444,0.119	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.227:0.154,0.466,0.38	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.012:0.988,0.012,0	1|1:2:0,0,1	0|1:1.439:0.138,0.285,0.577	0|0:0:1,0,0	1|0:1:0,1,0
+3	19919419	SNP-3.19917929.	C	A	.	PASS	AR2=0.974;DR2=0.98;AF=0.278	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.736:0.018,0.228,0.754	0|0:0:1,0,0	1|1:1.705:0.022,0.251,0.727	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.711:0.02,0.249,0.731	0|1:1.112:0.174,0.54,0.286	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.552:0.044,0.359,0.597	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.717:0.021,0.241,0.738	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.773:0.014,0.198,0.788	1|1:1.704:0.022,0.252,0.726	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.737:0.017,0.228,0.754	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.706:0.022,0.251,0.728	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1.293:0.063,0.581,0.356	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.706:0.022,0.25,0.728	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.694:0.024,0.258,0.718	1|1:1.712:0.033,0.222,0.745	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19920044	SNP-3.19918554.	C	A	.	PASS	AR2=0.97;DR2=0.979;AF=0.31	GT:DS:GP	0|0:0:1,0,0	1|1:1.9:0.004,0.092,0.904	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.503:0.564,0.368,0.068	0|0:0:1,0,0	1|1:1.708:0.023,0.245,0.731	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.406:0.008,0.579,0.413	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.975:0,0.025,0.975	1|1:2:0,0,1	1|1:1.65:0.04,0.271,0.689	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.599:0.059,0.283,0.658	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.58:0.049,0.322,0.629	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.905:0.002,0.091,0.907	0|0:0:1,0,0	1|1:1.981:0,0.019,0.981	1|1:2:0,0,1	1|1:1.979:0,0.021,0.979	0|0:0:1,0,0	1|1:1.967:0,0.032,0.967	0|0:0:1,0,0	1|1:1.864:0.001,0.134,0.865	1|1:2:0,0,1	1|1:1.802:0.011,0.176,0.813	0|0:0:1,0,0	1|0:0.704:0.296,0.704,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.819:0.007,0.167,0.826	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.939:0.001,0.06,0.939	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.67:0.005,0.319,0.675	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.413:0.076,0.434,0.489	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.929:0,0.07,0.93	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.783:0.008,0.202,0.791	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.544:0.053,0.349,0.597	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.855:0.002,0.14,0.857	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.691:0.01,0.29,0.7	0|0:0:1,0,0
+3	19921742	SNP-3.19920252.	C	A	.	PASS	AR2=0.993;DR2=0.994;AF=0.396	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.166:0.841,0.152,0.007	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.307:0.707,0.279,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.056:0.945,0.055,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.169:0.838,0.156,0.007	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0.315:0.718,0.25,0.033	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.057:0.944,0.055,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.136:0.869,0.127,0.005	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.098:0.904,0.093,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.126:0.879,0.117,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.1:0.903,0.095,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19922833	SNP-3.19921343.	C	A	.	PASS	AR2=0.979;DR2=0.982;AF=0.398	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.231:0.782,0.205,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.107:0.896,0.102,0.002	1|0:1:0,1,0	0|0:0.083:0.917,0.082,0	0|0:0.132:0.872,0.123,0.005	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.109:0.895,0.101,0.004	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.215:0.801,0.183,0.016	0|0:0.123:0.881,0.115,0.004	0|0:0.135:0.87,0.125,0.005	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.956,0.044,0	0|0:0:1,0,0	0|0:0.094:0.908,0.089,0.002	0|0:0.479:0.594,0.333,0.073	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.126:0.878,0.118,0.004	0|0:0:1,0,0	0|0:0.111:0.892,0.105,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.109:0.894,0.104,0.003	0|0:0:1,0,0	0|0:0.142:0.864,0.131,0.005	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.984:0,0.015,0.985	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.14:0.865,0.13,0.005	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.162:0.845,0.148,0.007	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.138:0.868,0.126,0.006	1|0:1:0,1,0	0|0:0.233:0.783,0.201,0.016	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.249:0.771,0.21,0.019	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.115:0.889,0.108,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.205:0.806,0.183,0.011	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.13:0.874,0.121,0.004	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.123:0.881,0.115,0.004	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.142:0.864,0.131,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.131:0.873,0.124,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.185:0.821,0.173,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.146:0.86,0.134,0.006	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.074:0.929,0.068,0.003	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19922943	SNP-3.19921453.	A	G	.	PASS	AR2=1;DR2=1;AF=0.255	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.982:0,0.018,0.982	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19924759	SNP-3.19923269.	A	G	.	PASS	AR2=0.879;DR2=0.907;AF=0.298	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.377:0.091,0.441,0.468	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.697:0.023,0.257,0.72	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.507:0.047,0.399,0.554	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.724:0.022,0.231,0.747	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.046:0.191,0.572,0.237	0|1:1.363:0.098,0.44,0.462	0|1:0.767:0.361,0.512,0.127	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.388:0.643,0.326,0.031	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.435:0.082,0.401,0.517	1|1:2:0,0,1	1|1:1.255:0.137,0.47,0.392	0|0:0.764:0.382,0.472,0.146	0|1:0.892:0.303,0.503,0.194	1|1:2:0,0,1	1|0:1.249:0.14,0.47,0.389	0|1:0.697:0.418,0.467,0.115	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.974:0.262,0.502,0.236	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.36:0.107,0.426,0.467	0|0:0:1,0,0	1|0:0.787:0.356,0.5,0.143	0|0:0.462:0.651,0.237,0.113	1|0:1.371:0.05,0.529,0.421	0|0:0:1,0,0	0|1:1.216:0.14,0.505,0.356	0|0:0.694:0.431,0.445,0.124	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|1:1.245:0.149,0.456,0.395	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.735:0.006,0.253,0.741	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.012:0.988,0.012,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.993:0,0.007,0.993	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.287:0.138,0.438,0.424	1|1:2:0,0,1	0|0:0:1,0,0	1|0:0.998:0.255,0.491,0.254	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.942:0.002,0.055,0.943	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.536:0.045,0.373,0.582	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.629:0.033,0.306,0.661	0|0:0.076:0.924,0.076,0	1|1:2:0,0,1	1|0:0.625:0.467,0.441,0.092	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.011:0.082,0.824,0.093	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.046:0.954,0.045,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.411:0.088,0.414,0.499	0|0:0:1,0,0	0|0:0.914:0.289,0.508,0.203	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.253:0.144,0.459,0.397	0|0:0:1,0,0	1|0:0.885:0.311,0.493,0.196	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.721:0.44,0.398,0.161	1|1:1.669:0.03,0.271,0.699	0|1:0.896:0.299,0.507,0.194	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.408:0.091,0.41,0.499	1|1:1.362:0.106,0.426,0.468	1|1:1.639:0.035,0.29,0.674	1|1:1.43:0.073,0.424,0.503	1|1:2:0,0,1	1|0:1.068:0.055,0.822,0.123	0|0:0.932:0.289,0.489,0.222	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.932:0.289,0.489,0.222	0|0:0.001:0.999,0.001,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.446:0.078,0.397,0.525	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	19924786	SNP-3.19923296.	C	A	.	PASS	AR2=0.998;DR2=0.999;AF=0.466	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.001:0.004,0.99,0.006	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.007:0,0.993,0.007	1|0:1.387:0,0.613,0.387	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19929387	SNP-3.19927897.	C	A	.	PASS	AR2=0.985;DR2=0.988;AF=0.343	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.145:0.856,0.143,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.958:0.001,0.041,0.959	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.078:0.926,0.071,0.004	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.164:0.839,0.158,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.03:0.97,0.03,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.833:0.004,0.16,0.837	1|1:2:0,0,1	0|0:0.022:0.978,0.022,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.834:0.011,0.143,0.845	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.976:0,0.023,0.976	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.607:0.399,0.594,0.006	1|1:1.949:0.001,0.05,0.95	1|1:2:0,0,1	1|1:1.928:0.001,0.07,0.929	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.792:0.006,0.197,0.798	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.265:0.101,0.533,0.366	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.843:0.004,0.149,0.847	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.038:0.962,0.037,0	0|0:0.002:0.998,0.002,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.205:0.079,0.638,0.283	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.796:0.011,0.181,0.807	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.886:0.003,0.108,0.889	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.922:0.002,0.074,0.924	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.034:0.967,0.032,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.975:0,0.024,0.976	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.975:0,0.024,0.976	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.955:0.001,0.044,0.956	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:1.956:0.001,0.042,0.957	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19929707	SNP-3.19928217.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.353	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.965:0.001,0.034,0.966	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.997:0.003,0.997,0	1|0:1.357:0.032,0.579,0.389	0|0:0.042:0.96,0.038,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.991:0,0.009,0.991	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19930698	SNP-3.19929208.	A	G	.	PASS	AR2=0.988;DR2=0.99;AF=0.205	GT:DS:GP	0|0:0.05:0.951,0.048,0.001	1|0:1:0,1,0	1|1:1.701:0.036,0.228,0.737	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.065:0.937,0.06,0.002	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.118:0.886,0.11,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.962,0.037,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.962,0.038,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0.212:0.788,0.212,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.242:0.769,0.221,0.01	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.782:0.022,0.175,0.803	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.201:0.811,0.178,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.022:0.978,0.021,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.048:0.952,0.047,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.958,0.04,0.002	0|0:0:1,0,0	0|0:0:1,0,0
+3	19931769	SNP-3.19930279.	C	A	.	PASS	AR2=0.997;DR2=0.997;AF=0.336	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.048:0.041,0.87,0.089	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.994:0,0.006,0.994	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.928:0.001,0.07,0.929	1|0:1:0,1,0	1|0:1:0,1,0	1|0:0.999:0.078,0.845,0.077	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.931:0.001,0.067,0.932	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.016:0.984,0.016,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.023:0.977,0.023,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0.02:0.981,0.019,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.935:0.003,0.059,0.938	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19932125	SNP-3.19930635.	C	A	.	PASS	AR2=0.993;DR2=0.995;AF=0.372	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.031:0.97,0.03,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0.018:0.982,0.018,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.021:0.98,0.02,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.026:0,0.974,0.026	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.038:0.962,0.037,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.348:0.688,0.276,0.036	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.926:0,0.074,0.926	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.343:0.692,0.273,0.035	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0.016:0.984,0.016,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.363:0.673,0.29,0.037	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19932245	SNP-3.19930755.	A	G	.	PASS	AR2=0.902;DR2=0.926;AF=0.325	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.698:0.024,0.254,0.722	0|1:0.594:0.49,0.425,0.085	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.156:0.163,0.518,0.319	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.669:0.027,0.277,0.696	1|0:1.513:0.05,0.387,0.563	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.352:0.071,0.506,0.423	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.807:0.01,0.173,0.817	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.204:0.799,0.197,0.004	0|0:0.501:0.573,0.354,0.074	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.958:0.251,0.54,0.209	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.815:0.011,0.162,0.826	0|0:0:1,0,0	0|0:0.769:0.348,0.534,0.117	0|1:1:0,1,0	1|1:1.828:0.008,0.156,0.836	1|1:2:0,0,1	0|0:0.797:0.378,0.447,0.175	0|0:0:1,0,0	0|0:0.45:0.622,0.305,0.073	0|1:0.363:0.637,0.363,0	1|1:2:0,0,1	0|1:0.986:0.208,0.597,0.195	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.958,0.042,0	0|0:0:1,0,0	1|1:1.51:0.064,0.362,0.574	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.036:0.964,0.036,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.069:0.933,0.065,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.075:0.927,0.071,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.043:0.957,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.929:0.279,0.513,0.208	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.694:0.369,0.568,0.063	0|0:0.285:0.742,0.231,0.027	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.771:0.014,0.202,0.785	0|0:0:1,0,0	1|0:1.072:0.186,0.556,0.258	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.081:0.924,0.071,0.005	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.781:0.014,0.19,0.795	1|1:1.758:0.014,0.213,0.773	1|1:1.783:0.013,0.19,0.797	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.47:0.043,0.444,0.513	0|0:0:1,0,0	0|0:0.608:0.465,0.461,0.074	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.308:0.724,0.244,0.032	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1.438:0.079,0.403,0.518	0|0:0.598:0.486,0.43,0.084	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.926,0.072,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.893:0.308,0.492,0.201	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.814:0.01,0.166,0.824	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.315:0.123,0.44,0.438	0|0:0.574:0.524,0.378,0.098	0|0:0.486:0.585,0.343,0.072	0|0:0.395:0.646,0.313,0.041	1|1:2:0,0,1	0|0:0.306:0.719,0.255,0.025	0|1:1.315:0.123,0.44,0.438	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.306:0.719,0.255,0.025	0|0:0.28:0.741,0.238,0.021	1|1:2:0,0,1	1|1:1.764:0.008,0.219,0.773	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.046:0.954,0.045,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.414:0.635,0.317,0.049	0|0:0:1,0,0	1|1:2:0,0,1
+3	19935876	SNP-3.19934386.	C	A	.	PASS	AR2=0.993;DR2=0.995;AF=0.364	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.99:0,0.01,0.99	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.04:0.961,0.038,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:0.982:0.027,0.965,0.008	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.546:0.031,0.392,0.577	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.85:0.003,0.143,0.854	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.511:0.054,0.381,0.565	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.021:0.979,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.092:0.912,0.084,0.004	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.937:0.001,0.062,0.937	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19936724	SNP-3.19935234.	C	A	.	PASS	AR2=0.987;DR2=0.99;AF=0.379	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:1.994:0,0.006,0.994	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.086:0.916,0.082,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.121:0.882,0.114,0.004	0|1:1:0,1,0	0|0:0:1,0,0	1|0:0.992:0.008,0.992,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.078:0.924,0.074,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.097:0.905,0.093,0.002	0|0:0:1,0,0	0|0:0.124:0.878,0.119,0.002	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.061:0.94,0.059,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.042:0.958,0.042,0	0|0:0.009:0.991,0.008,0	0|1:1:0,1,0	0|0:0.122:0.882,0.115,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.634:0.014,0.337,0.649	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.785:0.012,0.191,0.797	1|1:1.923:0.001,0.075,0.924	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|0:0.613:0.405,0.578,0.018	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.917:0.001,0.081,0.918	1|1:1.992:0,0.008,0.992	1|1:1.998:0,0.002,0.998	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.035:0.965,0.035,0	0|0:0:1,0,0	0|0:0.007:0.993,0.007,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.088:0.916,0.08,0.004	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.76:0,0.24,0.76	0|0:0:1,0,0	0|0:0.097:0.905,0.092,0.002	0|0:0.081:0.921,0.077,0.002	0|0:0:1,0,0	0|0:0.12:0.883,0.113,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.056:0.945,0.055,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.982:0,0.017,0.983	0|0:0:1,0,0
+3	19939524	SNP-3.19938034.	A	G	.	PASS	AR2=0.957;DR2=0.966;AF=0.471	GT:DS:GP	1|1:1.62:0.036,0.307,0.657	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.998:0,0.002,0.998	1|1:1.581:0.026,0.367,0.607	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.746:0.015,0.224,0.761	1|1:1.684:0.025,0.266,0.709	1|1:1.773:0.012,0.204,0.785	1|1:1.773:0.013,0.201,0.786	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.83:0.007,0.156,0.837	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.52:0.04,0.4,0.56	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.664:0.027,0.281,0.692	1|1:2:0,0,1	1|1:1.641:0.038,0.284,0.679	0|1:1:0,1,0	1|1:1.837:0.009,0.145,0.846	1|1:1.799:0.007,0.188,0.806	1|1:1.992:0,0.008,0.992	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.75:0.018,0.213,0.769	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	1|1:1.61:0.037,0.316,0.647	1|1:1.728:0.018,0.237,0.746	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.832:0.007,0.155,0.838	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.787:0.015,0.183,0.802	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.679:0.013,0.294,0.693	1|1:1.853:0.006,0.135,0.859	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.025:0.975,0.025,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.184:0.816,0.184,0	0|0:0.523:0.478,0.522,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.782:0.013,0.192,0.795	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.843:0.009,0.139,0.852	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.779:0.014,0.192,0.794	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.831:0.009,0.151,0.84	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.552:0.049,0.35,0.601	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:1.653:0.029,0.289,0.682	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.716:0.021,0.242,0.737	1|1:1.687:0.023,0.267,0.71	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.877:0.003,0.116,0.88	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.838:0.009,0.144,0.847	1|1:1.756:0.015,0.214,0.771	1|1:1.815:0.01,0.165,0.825	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.92:0.002,0.076,0.922	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.837:0.009,0.145,0.846	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.917:0.002,0.079,0.919	1|1:1.903:0.002,0.093,0.905	1|1:2:0,0,1	1|1:1.902:0.003,0.093,0.905	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	19941914	SNP-3.19940424.	C	A	.	PASS	AR2=0.99;DR2=0.992;AF=0.381	GT:DS:GP	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.107:0.895,0.103,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.189:0.82,0.172,0.009	0|0:0.05:0.951,0.048,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.138:0.868,0.127,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.11:0.893,0.104,0.003	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.95,0.05,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.119:0.881,0.119,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.966,0.034,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.936,0.063,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.834:0,0.166,0.834	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.999:0,0.001,0.999	1|1:2:0,0,1	0|0:0.066:0.934,0.066,0	1|1:2:0,0,1	1|0:0.542:0.479,0.5,0.021	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.14:0.001,0.858,0.141	1|0:1.116:0.035,0.813,0.151	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.996:0,0.004,0.996	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0.089:0.912,0.086,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.118:0.886,0.109,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19942216	SNP-3.19940726.	A	G	.	PASS	AR2=0.997;DR2=0.998;AF=0.254	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.829:0.171,0.829,0	0|1:0.657:0.345,0.652,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19944547	SNP-3.19943057.	C	A	.	PASS	AR2=1;DR2=1;AF=0.463	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19944661	SNP-3.19943171.	A	G	.	PASS	AR2=0.983;DR2=0.986;AF=0.21	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.845:0.005,0.145,0.85	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.747:0.016,0.22,0.763	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.858:0.004,0.135,0.861	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.176:0.831,0.161,0.007	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|1:1:0,1,0	0|0:0.1:0.9,0.1,0	0|0:0.298:0.702,0.298,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.315:0.685,0.315,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.213:0.799,0.19,0.011	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.232:0.782,0.205,0.014	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.189:0.821,0.17,0.009	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.839:0.007,0.147,0.846	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.23:0.783,0.203,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19948191	SNP-3.19946701.	C	A	.	PASS	AR2=0.983;DR2=0.987;AF=0.368	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.063:0.938,0.061,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.962:0.001,0.036,0.963	0|0:0:1,0,0	0|0:0.115:0.887,0.111,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.043:0.958,0.042,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.044:0.956,0.044,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.057:0.945,0.054,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.041:0.959,0.04,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.129:0.873,0.126,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.071:0.929,0.071,0	0|0:0:1,0,0	0|0:0.044:0.957,0.042,0.001	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.083:0.919,0.079,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.948:0.052,0.948,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.901:0.001,0.096,0.902	1|0:1.033:0.031,0.905,0.064	0|0:0:1,0,0	1|1:1.809:0.004,0.183,0.813	1|1:1.625:0.015,0.346,0.639	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.97:0,0.03,0.97	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.894:0.003,0.101,0.896	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.488:0.574,0.365,0.061	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0.136:0.866,0.132,0.002	0|0:0:1,0,0	0|0:0.077:0.925,0.073,0.002	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.074:0.928,0.071,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.937:0.001,0.061,0.938	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.087:0.916,0.082,0.002	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.476:0.582,0.359,0.059	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.044:0.957,0.043,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.039:0.962,0.038,0	0|0:0.037:0.963,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.068:0.933,0.065,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.049:0.952,0.047,0.001	0|0:0:1,0,0	0|0:0.039:0.961,0.038,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19948632	SNP-3.19947142.	A	G	.	PASS	AR2=0.981;DR2=0.985;AF=0.219	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.055:0.946,0.052,0.001	0|0:0:1,0,0	1|1:1.868:0.004,0.124,0.872	1|1:1.627:0.026,0.321,0.653	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.118:0.885,0.111,0.003	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.809:0.011,0.17,0.82	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.759:0.013,0.215,0.772	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.158:0.848,0.145,0.006	0|0:0:1,0,0	0|0:0.019:0.981,0.019,0	0|0:0:1,0,0	0|0:0.12:0.884,0.112,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.12:0.884,0.112,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.031:0.97,0.03,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.028:0.972,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.089:0.913,0.086,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.388:0.613,0.386,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.95:0.001,0.048,0.951	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.859:0.004,0.132,0.864	0|1:1:0,1,0	1|1:1.922:0.002,0.074,0.924	1|1:2:0,0,1	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.01:0.99,0.01,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.047:0.953,0.046,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.883:0.003,0.111,0.886	1|1:1.848:0.006,0.14,0.854	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:1.889:0.003,0.105,0.892	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.037:0.964,0.035,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.05:0.952,0.047,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.07:0.933,0.065,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19948939	SNP-3.19947449.	C	A	.	PASS	AR2=0.996;DR2=0.997;AF=0.425	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.51:0.49,0.51,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1.158:0.194,0.453,0.353	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19949392	SNP-3.19947902.	A	G	.	PASS	AR2=0.936;DR2=0.962;AF=0.247	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0.059:0.942,0.057,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.032:0.968,0.032,0	0|0:0.069:0.934,0.063,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.957,0.042,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.092:0.909,0.09,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.618:0.488,0.406,0.106	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.594:0.495,0.416,0.089	1|1:2:0,0,1	0|1:0.655:0.451,0.443,0.106	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.607:0.491,0.411,0.098	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.593:0.584,0.239,0.177	0|1:1:0,1,0	0|0:0.601:0.496,0.407,0.097	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.592:0.504,0.399,0.096	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.646:0.457,0.44,0.103	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.617:0.398,0.586,0.016	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.653:0.453,0.442,0.105	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.061:0.939,0.06,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.554:0.538,0.37,0.092	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.616:0.483,0.418,0.099	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.041:0.959,0.04,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.626:0.476,0.422,0.102	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.149:0.857,0.137,0.006	0|0:0:1,0,0	0|0:0.265:0.759,0.218,0.024	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0
+3	19952853	SNP-3.19951363.	C	A	.	PASS	AR2=0.982;DR2=0.987;AF=0.355	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.985:0,0.015,0.985	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.957:0.001,0.041,0.958	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0,0.031,0.968	1|1:1.958:0,0.042,0.958	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:1.896:0,0.103,0.896	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.305:0.718,0.26,0.022	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0,0.032,0.968	1|0:1:0,1,0	1|0:1.183:0.013,0.791,0.196	0|0:0.45:0.596,0.358,0.046	0|0:0.306:0.718,0.257,0.024	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.307:0.718,0.258,0.024	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.31:0.715,0.261,0.025	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.306:0.718,0.257,0.024	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.307:0.718,0.258,0.024	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.984:0,0.016,0.984	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.306:0.719,0.257,0.024	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.956:0,0.043,0.956	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.948:0,0.051,0.948	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.328:0.698,0.275,0.026	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.961:0,0.038,0.962	0|0:0:1,0,0
+3	19953252	SNP-3.19951762.	C	A	.	PASS	AR2=0.991;DR2=0.992;AF=0.373	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.958:0,0.042,0.958	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.99:0,0.01,0.99	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.947:0.002,0.049,0.949	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.387:0.014,0.585,0.401	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.812:0.361,0.466,0.173	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.811:0.362,0.466,0.173	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.822:0.354,0.471,0.175	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19956745	SNP-3.19955255.	C	A	.	PASS	AR2=0.97;DR2=0.977;AF=0.449	GT:DS:GP	0|0:0:1,0,0	1|1:1.891:0.003,0.103,0.894	0|0:0.121:0.883,0.113,0.004	1|1:1.932:0.002,0.065,0.934	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0.016:0.984,0.016,0	1|0:1.014:0.053,0.88,0.067	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.221:0.79,0.199,0.011	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.358:0.685,0.273,0.042	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.043:0.957,0.042,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.034:0.966,0.033,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.024:0.976,0.023,0	0|0:0:1,0,0	0|0:0.015:0.985,0.015,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.181:0.822,0.175,0.003	0|0:0.041:0.96,0.04,0.001	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.956:0,0.044,0.956	1|1:1.968:0,0.032,0.968	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.916:0.002,0.08,0.918	1|0:1.339:0.108,0.444,0.448	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.207:0.793,0.206,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.131:0.182,0.504,0.314	1|1:1.401:0.092,0.414,0.493	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.73:0.005,0.259,0.735	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.307:0.121,0.45,0.429	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.204:0.808,0.181,0.011	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.009:0.056,0.879,0.065	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.122:0.882,0.114,0.004	0|0:0:1,0,0	1|1:1.302:0.124,0.451,0.426	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.115:0.889,0.108,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.3:0.124,0.451,0.425	1|0:1:0,1,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	0|0:0.024:0.976,0.024,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.878:0.004,0.114,0.882	0|0:0:1,0,0	1|1:1.903:0.003,0.092,0.906	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.09:0.912,0.085,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.997:0,0.003,0.997	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19957190	SNP-3.19955700.	A	G	.	PASS	AR2=0.973;DR2=0.977;AF=0.5	GT:DS:GP	1|1:1.93:0.001,0.067,0.932	0|0:0:1,0,0	1|1:1.921:0.002,0.076,0.923	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.68:0.017,0.285,0.697	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.832:0.007,0.155,0.839	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.689:0.018,0.275,0.707	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.911:0.002,0.085,0.913	0|0:0:1,0,0	1|1:1.781:0.013,0.193,0.794	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.827:0.007,0.158,0.835	1|1:2:0,0,1	1|1:1.76:0.015,0.209,0.775	1|1:2:0,0,1	1|1:1.621:0.044,0.29,0.666	1|1:1.85:0.005,0.141,0.855	1|1:2:0,0,1	1|1:1.655:0.021,0.302,0.677	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.897:0.003,0.097,0.9	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.926:0.002,0.071,0.928	1|1:1.916:0.002,0.08,0.918	1|1:1.926:0.002,0.071,0.927	1|1:2:0,0,1	1|1:1.922:0.002,0.075,0.923	1|1:2:0,0,1	1|1:1.903:0.002,0.093,0.905	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.904:0.002,0.091,0.906	1|1:1.906:0.002,0.09,0.908	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.911:0.002,0.085,0.913	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.861:0.005,0.129,0.866	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.933:0.001,0.065,0.934	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.875:0.004,0.117,0.879	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.58:0.022,0.377,0.601	0|1:0.961:0.039,0.961,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.852:0.004,0.14,0.856	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.931:0.001,0.067,0.932	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.011:0.989,0.011,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.917:0.002,0.08,0.919	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.601:0.051,0.298,0.651	1|1:1.899:0.003,0.096,0.901	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.877:0.004,0.114,0.881	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.873:0.002,0.124,0.875	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.927:0.002,0.07,0.928	1|1:1.648:0.02,0.313,0.667	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.938:0.001,0.06,0.939	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.887:0.003,0.107,0.89	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.939:0.001,0.059,0.94	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.937:0.001,0.061,0.938	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.935:0,0.065,0.935	0|0:0:1,0,0	1|1:1.909:0.003,0.086,0.911	1|1:1.893:0.004,0.1,0.896	0|0:0:1,0,0	1|1:2:0,0,1
+3	19957532	SNP-3.19956042.	A	G	.	PASS	AR2=0.95;DR2=0.96;AF=0.454	GT:DS:GP	1|1:1.752:0.016,0.217,0.768	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.847:0.006,0.14,0.853	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.63:0.033,0.304,0.663	0|0:0.762:0.332,0.574,0.094	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.513:0.06,0.367,0.573	1|1:1.381:0.063,0.493,0.444	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1.456:0.038,0.468,0.494	1|1:2:0,0,1	1|1:1.64:0.03,0.3,0.67	1|1:1.532:0.056,0.355,0.588	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.083:0.233,0.45,0.316	1|1:1.66:0.022,0.297,0.681	1|1:2:0,0,1	0|1:1.055:0.139,0.667,0.194	0|1:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.749:0.016,0.219,0.765	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.752:0.016,0.216,0.768	1|0:1:0,1,0	1|1:1.76:0.014,0.211,0.774	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.761:0.014,0.21,0.775	1|1:1.761:0.014,0.21,0.775	1|1:1.768:0.014,0.204,0.782	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:1.712:0.02,0.249,0.731	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.777:0.013,0.197,0.79	1|1:1.768:0.014,0.205,0.782	1|1:2:0,0,1	1|1:1.783:0.013,0.192,0.795	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|1:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.761:0.014,0.21,0.776	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.762:0.014,0.209,0.776	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.853:0.005,0.136,0.858	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.84:0.006,0.147,0.846	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.802:0.004,0.19,0.806	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.731:0.019,0.232,0.749	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.757:0.015,0.214,0.771	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.848:0.006,0.139,0.854	1|1:1.94:0.001,0.058,0.941	1|1:1.677:0.029,0.266,0.705	1|1:1.772:0.013,0.201,0.785	1|1:1.939:0.001,0.059,0.94	1|1:1.769:0.014,0.204,0.783	1|1:2:0,0,1	1|1:1.871:0.004,0.12,0.875	1|1:1.979:0,0.02,0.979	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.947:0.002,0.048,0.949	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.732:0.018,0.231,0.751	0|0:0:1,0,0	1|1:1.772:0.013,0.201,0.785	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.875:0.002,0.122,0.876	0|0:0:1,0,0	1|1:1.886:0.005,0.104,0.891	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1
+3	19961777	SNP-3.19960287.	C	A	.	PASS	AR2=0.997;DR2=0.998;AF=0.339	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.026,0.974	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.985:0,0.015,0.985	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.029:0.971,0.029,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.045:0.955,0.045,0	1|0:1.359:0.01,0.622,0.369	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.875:0.004,0.117,0.879	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19962829	SNP-3.19961339.	C	A	.	PASS	AR2=0.976;DR2=0.981;AF=0.453	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.184:0.825,0.166,0.009	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.098:0.905,0.093,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.252:0.765,0.218,0.017	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0.11:0.894,0.102,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.319:0.719,0.242,0.038	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.334:0.694,0.278,0.028	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.231:0.781,0.206,0.013	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.3:0.723,0.255,0.023	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.141:0.863,0.132,0.005	0|0:0:1,0,0	0|0:0.342:0.683,0.292,0.025	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.333:0.692,0.283,0.025	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.923:0.003,0.071,0.926	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.982:0,0.017,0.983	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:1.977:0,0.023,0.977	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.108:0.894,0.103,0.003	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.19:0.819,0.173,0.008	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.329:0.698,0.275,0.027	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.088:0.914,0.084,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0.317:0.703,0.277,0.02	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.784:0.368,0.48,0.152	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.21:0.802,0.186,0.012	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.087:0.916,0.082,0.002	0|0:0:1,0,0	0|0:0.084:0.918,0.08,0.002	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.139:0.867,0.128,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.076:0.927,0.071,0.002	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19969198	SNP-3.19967708.	A	G	.	PASS	AR2=0.833;DR2=0.862;AF=0.292	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.04:0.219,0.522,0.259	0|0:0:1,0,0	0|0:0.812:0.355,0.479,0.167	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.793:0.357,0.494,0.15	0|0:0:1,0,0	1|1:1.344:0.101,0.453,0.445	0|1:0.541:0.487,0.485,0.028	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.177:0.144,0.535,0.321	0|0:0:1,0,0	0|1:0.951:0.284,0.481,0.235	0|1:0.707:0.388,0.516,0.095	0|1:1:0,1,0	0|0:0.74:0.395,0.47,0.135	0|0:0:1,0,0	0|0:0.765:0.372,0.491,0.137	1|0:0.836:0.316,0.532,0.152	0|1:0.624:0.425,0.526,0.049	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.776:0.376,0.472,0.152	0|0:0.473:0.544,0.439,0.017	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.825:0.347,0.481,0.172	0|0:0.155:0.846,0.154,0.001	1|0:0.867:0.324,0.485,0.191	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.784:0.014,0.189,0.797	0|0:0:1,0,0	0|1:1.076:0.183,0.557,0.26	0|1:1:0,1,0	0|1:0.902:0.302,0.495,0.203	0|0:0:1,0,0	1|0:1:0,1,0	1|1:1.463:0.068,0.4,0.531	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.132:0.188,0.491,0.32	0|0:0:1,0,0	1|1:1.023:0.253,0.472,0.276	1|1:2:0,0,1	0|1:1.013:0.084,0.818,0.098	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.442:0.053,0.452,0.495	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.618:0.462,0.458,0.08	0|0:0:1,0,0	1|1:1.314:0.067,0.552,0.381	1|1:2:0,0,1	0|1:0.679:0.424,0.474,0.102	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.741:0.366,0.528,0.106	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.478:0.081,0.36,0.559	0|0:0.774:0.376,0.473,0.151	0|1:0.527:0.491,0.491,0.018	1|0:1.133:0.189,0.488,0.322	0|0:0:1,0,0	1|1:1.224:0.129,0.518,0.353	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.105:0.187,0.522,0.292	0|0:0:1,0,0	0|1:0.939:0.281,0.498,0.221	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.462:0.082,0.375,0.544	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.846:0.316,0.522,0.162	1|1:2:0,0,1	0|0:0.699:0.437,0.428,0.135	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.764:0.381,0.474,0.145	0|0:0:1,0,0	0|1:1.225:0.068,0.639,0.293	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0.525:0.488,0.499,0.013	0|1:0.768:0.38,0.471,0.149	0|0:0:1,0,0	0|1:1.05:0.221,0.509,0.27	0|1:1.113:0.201,0.485,0.314	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.736:0.015,0.234,0.751	0|1:0.935:0.234,0.597,0.169	0|1:1.138:0.189,0.484,0.327	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.814:0.353,0.479,0.168	1|1:2:0,0,1	1|1:1.22:0.164,0.452,0.384	0|1:1.418:0.086,0.41,0.504	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.572:0.492,0.444,0.064	1|1:2:0,0,1	0|1:1.129:0.19,0.49,0.319	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.744:0.022,0.213,0.766	1|1:1.808:0.014,0.164,0.822	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.693:0.017,0.272,0.711	1|1:2:0,0,1	1|1:1.853:0.006,0.135,0.859	0|1:0.875:0.324,0.477,0.199	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.663:0.025,0.288,0.687	0|0:0:1,0,0	1|1:2:0,0,1	0|0:1.131:0.221,0.427,0.352	0|0:0:1,0,0	1|1:2:0,0,1
+3	19969228	SNP-3.19967738.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.375	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1.001:0,0.999,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.99:0.255,0.5,0.245	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19969947	SNP-3.19968457.	C	A	.	PASS	AR2=0.997;DR2=0.998;AF=0.365	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.065:0.936,0.063,0.001	0|1:0.61:0.405,0.581,0.014	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.004:0.996,0.004,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.002:0.998,0.002,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.965,0.035,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.993:0,0.007,0.993	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.979:0,0.021,0.979	1|1:1.94:0.001,0.059,0.941	1|1:1.988:0,0.012,0.988	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19970174	SNP-3.19968684.	C	A	.	PASS	AR2=1;DR2=1;AF=0.399	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19970612	SNP-3.19969122.	A	G	.	PASS	AR2=0.999;DR2=0.999;AF=0.247	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.921:0.001,0.077,0.922	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.979:0,0.021,0.979	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.965:0.001,0.034,0.965	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.943:0.001,0.055,0.944	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.973:0,0.027,0.973	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19971695	SNP-3.19970205.	C	A	.	PASS	AR2=0.995;DR2=0.996;AF=0.344	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.06:0.942,0.056,0.002	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:0.696:0.313,0.678,0.009	1|0:0.656:0.351,0.641,0.008	0|0:0.044:0.957,0.042,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.063:0.938,0.061,0.001	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.058:0.942,0.057,0.001	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.044:0.957,0.042,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.017:0.983,0.016,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.078:0.923,0.076,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.06:0.942,0.056,0.002	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19973386	SNP-3.19971896.	C	A	.	PASS	AR2=0.974;DR2=0.977;AF=0.445	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.974:0,0.026,0.974	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.237:0,0.763,0.237	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:2:0,0,1	0|1:1.145:0.185,0.486,0.33	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.551:0.009,0.432,0.559	1|0:1.564:0.004,0.429,0.567	1|0:1.134:0.189,0.488,0.323	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.143:0.185,0.487,0.328	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:1.001:0.256,0.488,0.257	1|1:2:0,0,1	1|0:1.14:0.186,0.489,0.326	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.152:0.181,0.486,0.333	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.134:0.189,0.488,0.323	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.126:0.192,0.491,0.318	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.138:0.187,0.489,0.324	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.145:0.185,0.486,0.33	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19974011	SNP-3.19972521.	A	G	.	PASS	AR2=0.977;DR2=0.987;AF=0.302	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:1.935:0.001,0.063,0.936	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.959:0,0.041,0.959	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.883:0.004,0.11,0.886	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.627:0.474,0.425,0.101	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.315:0.687,0.312,0.002	0|1:0.628:0.472,0.428,0.1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.035:0.965,0.035,0	0|1:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.628:0.472,0.428,0.1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.603:0.493,0.41,0.097	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.627:0.474,0.425,0.101	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	19975116	SNP-3.19973626.	A	G	.	PASS	AR2=0.876;DR2=0.902;AF=0.341	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.26:0.085,0.569,0.345	0|0:0.911:0.292,0.505,0.203	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.379:0.04,0.54,0.42	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.287:0.088,0.537,0.375	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.681:0.021,0.277,0.702	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1.226:0.146,0.482,0.372	0|0:0.663:0.438,0.46,0.102	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.743:0.38,0.497,0.123	1|1:2:0,0,1	1|0:0.977:0.272,0.478,0.25	1|1:2:0,0,1	0|0:0.587:0.506,0.401,0.093	1|1:2:0,0,1	0|1:0.622:0.457,0.465,0.078	0|0:0:1,0,0	1|1:1.279:0.118,0.484,0.398	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.386:0.095,0.423,0.481	1|0:1.279:0.127,0.468,0.406	1|1:1.413:0.084,0.418,0.497	0|1:1.242:0.144,0.471,0.385	0|0:0:1,0,0	1|1:1.512:0.052,0.385,0.564	1|1:1.593:0.035,0.337,0.628	1|1:1.573:0.048,0.331,0.621	0|0:0:1,0,0	1|1:1.34:0.107,0.446,0.447	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.691:0.015,0.278,0.707	1|1:2:0,0,1	1|0:1.389:0.071,0.469,0.46	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|0:0.901:0.268,0.562,0.169	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.729:0.022,0.227,0.751	1|1:1.647:0.037,0.279,0.684	0|0:0:1,0,0	0|1:0.672:0.328,0.672,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:0.864:0.269,0.598,0.133	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.507:0.078,0.336,0.585	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.899:0.158,0.785,0.057	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.95:0.277,0.496,0.227	1|1:1.643:0.028,0.302,0.67	1|1:1.529:0.05,0.372,0.579	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1.23:0.15,0.47,0.38	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.244:0.145,0.466,0.389	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.808:0.343,0.507,0.151	0|0:0:1,0,0	1|0:0.816:0.335,0.514,0.151	0|0:0:1,0,0	1|0:1.248:0.136,0.479,0.384	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:1.444:0.039,0.478,0.483	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.237:0.1,0.564,0.336	0|1:1.391:0.091,0.426,0.483	1|1:2:0,0,1	1|1:1.35:0.109,0.433,0.459	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1.075:0.15,0.626,0.224	1|1:1.437:0.08,0.403,0.517	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.208:0.159,0.475,0.366	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.259:0.142,0.456,0.401	1|1:1.841:0.012,0.135,0.853	1|1:1.883:0.005,0.108,0.888	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.968:0.267,0.497,0.235	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.762:0.019,0.2,0.781	1|1:1.799:0.015,0.171,0.814	1|1:1.717:0.013,0.257,0.73	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.908:0.004,0.084,0.912	1|1:1.716:0.04,0.205,0.755	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.796:0.017,0.17,0.813	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.837:0.016,0.13,0.854	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.051:0.262,0.425,0.313	0|0:0:1,0,0	1|1:2:0,0,1
+3	19976521	SNP-3.19975031.	C	A	.	PASS	AR2=0.989;DR2=0.992;AF=0.366	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.082:0.92,0.079,0.002	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.981:0,0.018,0.981	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.054:0.947,0.052,0.001	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.02:0.98,0.02,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.186:0.815,0.183,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0.181:0.836,0.148,0.016	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	1|0:1:0,1,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.379:0.658,0.304,0.037	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.026:0.974,0.026,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.393:0.647,0.312,0.04	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.467:0.596,0.341,0.063	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.181:0.836,0.148,0.016	0|0:0:1,0,0	1|1:1.987:0,0.012,0.987	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19983247	SNP-3.19981757.	C	A	.	PASS	AR2=0.943;DR2=0.954;AF=0.271	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.001:0.999,0.001,0	0|0:0:1,0,0	0|1:1.357:0.028,0.587,0.385	1|1:2:0,0,1	1|0:0.754:0.392,0.462,0.146	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1.262:0.03,0.677,0.293	0|1:0.985:0.24,0.534,0.226	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.122:0.15,0.577,0.273	1|1:2:0,0,1	0|0:1.036:0.215,0.535,0.25	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.986:0,0.014,0.986	1|1:1.984:0,0.016,0.984	1|0:1.365:0.018,0.598,0.384	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.867:0.005,0.124,0.871	1|1:1.56:0.03,0.38,0.59	1|1:2:0,0,1	0|0:0.035:0.966,0.033,0.001	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:0.968:0.246,0.54,0.214	1|1:1.205:0.131,0.534,0.336	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.669:0.418,0.496,0.087	1|0:1.159:0.11,0.621,0.269	0|1:1.371:0.021,0.586,0.392	0|1:0.688:0.413,0.487,0.1	1|1:1.983:0,0.017,0.983	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.626:0.505,0.365,0.13	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1.534:0.044,0.378,0.578	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:0.9:0.305,0.489,0.206	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:0.831:0.343,0.483,0.174	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.93:0.001,0.068,0.931	1|1:1.962:0,0.037,0.963	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:0.669:0.417,0.496,0.087	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1.349:0.006,0.64,0.355	1|0:0.842:0.337,0.484,0.179	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1.213:0.068,0.652,0.28	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.979:0,0.021,0.979	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.98:0,0.02,0.98	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19989349	SNP-3.19987859.	C	A	.	PASS	AR2=0.975;DR2=0.979;AF=0.352	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.144:0.861,0.133,0.005	1|1:2:0,0,1	0|0:0.144:0.861,0.133,0.005	0|0:0:1,0,0	0|0:0.144:0.861,0.133,0.005	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|0:1:0,1,0	0|0:0.144:0.861,0.133,0.005	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.144:0.861,0.133,0.005	1|1:2:0,0,1	0|0:0.144:0.861,0.133,0.005	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.144:0.861,0.133,0.005	0|0:0.144:0.861,0.133,0.005	0|0:0.144:0.861,0.133,0.005	0|0:0.144:0.861,0.133,0.005	0|0:0.144:0.861,0.133,0.005	0|0:0.144:0.861,0.133,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.144:0.861,0.133,0.005	0|0:0.144:0.861,0.133,0.005	0|0:0.144:0.861,0.133,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.897:0.001,0.102,0.898	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.577:0.017,0.389,0.594	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.747:0.27,0.714,0.016	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.144:0.861,0.133,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.141:0.864,0.131,0.005	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.144:0.861,0.133,0.005	0|0:0.144:0.861,0.133,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.969:0,0.031,0.969	0|0:0.144:0.861,0.133,0.005	1|1:1.784:0.012,0.192,0.796	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.761:0.015,0.209,0.776	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.785:0.012,0.191,0.797	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.144:0.861,0.133,0.005	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.144:0.861,0.133,0.005	1|0:1:0,1,0	0|0:0.144:0.861,0.133,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.144:0.861,0.133,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0
+3	19989539	SNP-3.19988049.	C	A	.	PASS	AR2=0.965;DR2=0.972;AF=0.375	GT:DS:GP	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.045:0.955,0.044,0.001	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.045:0.955,0.044,0.001	0|0:0.045:0.955,0.044,0.001	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.68:0.03,0.259,0.71	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.955,0.044,0.001	0|0:0.141:0.864,0.131,0.005	0|0:0:1,0,0	0|0:0.045:0.955,0.044,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.141:0.864,0.131,0.005	0|0:0:1,0,0	0|0:0.112:0.891,0.105,0.004	0|0:0.141:0.864,0.131,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.127:0.877,0.12,0.004	0|0:0:1,0,0	0|0:0.128:0.876,0.12,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.129:0.875,0.121,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.128:0.876,0.12,0.004	0|0:0.131:0.874,0.122,0.004	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.752:0.005,0.237,0.757	1|1:2:0,0,1	0|0:0.116:0.888,0.109,0.004	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.96:0,0.039,0.96	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.969:0,0.031,0.969	1|0:1.343:0.009,0.638,0.353	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.916:0.002,0.08,0.918	0|0:0.132:0.875,0.118,0.007	1|1:2:0,0,1	0|0:0.157:0.849,0.145,0.006	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:0.625:0.4,0.576,0.024	1|0:0.604:0.419,0.558,0.023	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.228:0.787,0.198,0.015	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:0.432:0.584,0.4,0.016	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.212:0.801,0.186,0.013	0|0:0.104:0.899,0.098,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.234:0.781,0.204,0.015	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.044:0.956,0.043,0.001	0|0:0:1,0,0	1|1:1.835:0.006,0.152,0.842	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.955,0.044,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.955,0.044,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.141:0.864,0.131,0.005	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.915:0.002,0.081,0.917	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.955,0.044,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.955,0.044,0.001	1|1:2:0,0,1	0|0:0.141:0.864,0.131,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.141:0.864,0.131,0.005	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.247:0.769,0.215,0.016	1|1:2:0,0,1	0|0:0.125:0.878,0.118,0.004	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.139:0.866,0.129,0.005	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.262:0.759,0.22,0.021	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.91:0.002,0.086,0.912	0|0:0:1,0,0	0|0:0.045:0.955,0.044,0.001	0|0:0:1,0,0	0|0:0.419:0.604,0.373,0.023	0|0:0.045:0.955,0.044,0.001	0|0:0:1,0,0	0|0:0.111:0.893,0.104,0.003	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.141:0.864,0.131,0.005	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.045:0.955,0.044,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.132:0.875,0.119,0.007	0|0:0:1,0,0	1|1:1.997:0,0.003,0.997	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0.05:0.951,0.048,0.001	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0
+3	19991345	SNP-3.19989855.	A	G	.	PASS	AR2=0.993;DR2=0.994;AF=0.306	GT:DS:GP	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0.156:0.85,0.144,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.156:0.85,0.144,0.006	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0.156:0.85,0.144,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.156:0.85,0.144,0.006	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0.156:0.85,0.144,0.006	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.098:0.903,0.097,0.001	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.037:0.963,0.036,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.027:0.973,0.027,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.005:0.995,0.005,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.115:0.885,0.115,0	0|0:0.052:0.948,0.052,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.003:0.997,0.003,0	0|0:0.003:0.997,0.003,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.953:0.001,0.046,0.953	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.968:0,0.032,0.968	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.035:0.966,0.034,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0.156:0.85,0.144,0.006	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.014:0.986,0.014,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0
+3	19991997	SNP-3.19990507.	A	G	.	PASS	AR2=0.996;DR2=0.996;AF=0.241	GT:DS:GP	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.976:0,0.023,0.977	1|1:1.976:0,0.024,0.976	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:1.97:0,0.029,0.97	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.968:0,0.032,0.968	0|0:0:1,0,0	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.959:0.001,0.04,0.96	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0.006:0.994,0.006,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.256:0.006,0.731,0.262	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.956:0.001,0.043,0.957	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:1.758:0.005,0.232,0.763	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:1.966:0,0.034,0.966	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1.032:0.012,0.944,0.044	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1
+3	19992016	SNP-3.19990526.	C	A	.	PASS	AR2=0.998;DR2=0.998;AF=0.316	GT:DS:GP	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	0|1:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|0:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0.019:0.981,0.019,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|1:1:0,1,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|0:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.946:0,0.054,0.946	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:1.688:0.028,0.256,0.716	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|1:1:0,1,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|0:1:0,1,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	1|1:2:0,0,1	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	0|0:0:1,0,0	1|1:2:0,0,1	0|0:0:1,0,0